Bugs
Tail of log for tilix on armhf:
env[PKG_CONFIG_PATH]:
Called `/usr/bin/pkg-config --libs libsecret-1` -> 0
-L/usr/lib/arm-linux-gnueabihf -lsecret-1 -lgio-2.0 -lgobject-2.0 -lglib-2.0
env[PKG_CONFIG_PATH]:
Called `/usr/bin/pkg-config --libs libsecret-1` -> 0
-lsecret-1 -lgio-2.0 -lgobject-2.0 -lglib-2.0
Run-time dependency libsecret-1 found: YES 0.20.5
Program msgfmt found: YES (/usr/bin/msgfmt)
Program msginit found: YES (/usr/bin/msginit)
Program msgmerge found: YES (/usr/bin/msgmerge)
Program xgettext found: YES (/usr/bin/xgettext)
../data/meson.build:13:0: ERROR: Function does not take positional arguments.
dh_auto_configure: error: cd obj-arm-linux-gnueabihf && LC_ALL=C.UTF-8 meson .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/arm-linux-gnueabihf returned exit code 1
make: *** [debian/rules:11: build-arch] Error 25
/usr/include/c++/11/bits/stl_algobase.h:527:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Suggestion*, std::vector<Suggestion> >' changed in GCC 7.1
g++ -std=gnu++14 -DPACKAGE_NAME=\"poedit\" -DPACKAGE_TARNAME=\"poedit\" -DPACKAGE_VERSION=\"3.0\" -DPACKAGE_STRING=\"poedit\ 3.0\" -DPACKAGE_BUGREPORT=\"help@poedit.net\" -DPACKAGE_URL=\"\" -DPACKAGE=\"poedit\" -DVERSION=\"3.0\" -DHAVE_CXX14=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_CPPREST_HTTP_CLIENT_H=1 -DHAVE_HTTP_CLIENT=1 -DHAVE_PPL=1 -DHAVE_NLOHMANN_JSON_HPP=1 -DHAVE_MKDTEMP=1 -DHAVE_CLD2_PUBLIC_COMPACT_LANG_DET_H=1 -DHAVE_CLD2=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -I/usr/include -pthread -I/usr/include/libsecret-1 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/lib/arm-linux-gnueabihf/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -pthread -I/usr/include/gtkspell-3.0 -I/usr/include/enchant-2 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/lucene++ -DHAVE_PUGIXML -g -Wall -O0 -DwxNO_UNSAFE_WXSTRING_CONV=1 "-DPOEDIT_PREFIX=\"/usr\"" -c -o keychain/keytar_posix.o keychain/keytar_posix.cc
g++ -std=gnu++14 -DPACKAGE_NAME=\"poedit\" -DPACKAGE_TARNAME=\"poedit\" -DPACKAGE_VERSION=\"3.0\" -DPACKAGE_STRING=\"poedit\ 3.0\" -DPACKAGE_BUGREPORT=\"help@poedit.net\" -DPACKAGE_URL=\"\" -DPACKAGE=\"poedit\" -DVERSION=\"3.0\" -DHAVE_CXX14=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_CPPREST_HTTP_CLIENT_H=1 -DHAVE_HTTP_CLIENT=1 -DHAVE_PPL=1 -DHAVE_NLOHMANN_JSON_HPP=1 -DHAVE_MKDTEMP=1 -DHAVE_CLD2_PUBLIC_COMPACT_LANG_DET_H=1 -DHAVE_CLD2=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -I/usr/include -pthread -I/usr/include/libsecret-1 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/lib/arm-linux-gnueabihf/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -pthread -I/usr/include/gtkspell-3.0 -I/usr/include/enchant-2 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/lucene++ -DHAVE_PUGIXML -g -Wall -O0 -DwxNO_UNSAFE_WXSTRING_CONV=1 "-DPOEDIT_PREFIX=\"/usr\"" -c -o wx_backports/wx_gtk_activityindicator.o wx_backports/wx_gtk_activityindicator.cpp
g++ -std=gnu++14 -DPACKAGE_NAME=\"poedit\" -DPACKAGE_TARNAME=\"poedit\" -DPACKAGE_VERSION=\"3.0\" -DPACKAGE_STRING=\"poedit\ 3.0\" -DPACKAGE_BUGREPORT=\"help@poedit.net\" -DPACKAGE_URL=\"\" -DPACKAGE=\"poedit\" -DVERSION=\"3.0\" -DHAVE_CXX14=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_CPPREST_HTTP_CLIENT_H=1 -DHAVE_HTTP_CLIENT=1 -DHAVE_PPL=1 -DHAVE_NLOHMANN_JSON_HPP=1 -DHAVE_MKDTEMP=1 -DHAVE_CLD2_PUBLIC_COMPACT_LANG_DET_H=1 -DHAVE_CLD2=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -I/usr/include -pthread -I/usr/include/libsecret-1 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/lib/arm-linux-gnueabihf/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -pthread -I/usr/include/gtkspell-3.0 -I/usr/include/enchant-2 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/lucene++ -DHAVE_PUGIXML -g -Wall -O0 -DwxNO_UNSAFE_WXSTRING_CONV=1 "-DPOEDIT_PREFIX=\"/usr\"" -c -o wx_backports/wx_gtk_nativewin.o wx_backports/wx_gtk_nativewin.cpp
g++ -std=gnu++14 -DPACKAGE_NAME=\"poedit\" -DPACKAGE_TARNAME=\"poedit\" -DPACKAGE_VERSION=\"3.0\" -DPACKAGE_STRING=\"poedit\ 3.0\" -DPACKAGE_BUGREPORT=\"help@poedit.net\" -DPACKAGE_URL=\"\" -DPACKAGE=\"poedit\" -DVERSION=\"3.0\" -DHAVE_CXX14=1 -DHAVE_BOOST=/\*\*/ -DHAVE_BOOST_SYSTEM=/\*\*/ -DHAVE_BOOST_REGEX=/\*\*/ -DHAVE_BOOST_THREAD=/\*\*/ -DHAVE_STDIO_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_STRINGS_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_UNISTD_H=1 -DSTDC_HEADERS=1 -DHAVE_BOOST_IOSTREAMS=/\*\*/ -DHAVE_CPPREST_HTTP_CLIENT_H=1 -DHAVE_HTTP_CLIENT=1 -DHAVE_PPL=1 -DHAVE_NLOHMANN_JSON_HPP=1 -DHAVE_MKDTEMP=1 -DHAVE_CLD2_PUBLIC_COMPACT_LANG_DET_H=1 -DHAVE_CLD2=1 -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -I/usr/include -pthread -I/usr/include/libsecret-1 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/lib/arm-linux-gnueabihf/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -pthread -I/usr/include/gtkspell-3.0 -I/usr/include/enchant-2 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/lucene++ -DHAVE_PUGIXML -g -Wall -O0 -DwxNO_UNSAFE_WXSTRING_CONV=1 "-DPOEDIT_PREFIX=\"/usr\"" -c -o compiled_xrc.o compiled_xrc.cpp
g++ -std=gnu++14 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -pthread -I/usr/include -pthread -I/usr/include/libsecret-1 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/lib/arm-linux-gnueabihf/wx/include/gtk3-unicode-3.0 -I/usr/include/wx-3.0 -D_FILE_OFFSET_BITS=64 -DWXUSINGDLL -D__WXGTK__ -pthread -pthread -I/usr/include/gtkspell-3.0 -I/usr/include/enchant-2 -I/usr/include/gtk-3.0 -I/usr/include/at-spi2-atk/2.0 -I/usr/include/at-spi-2.0 -I/usr/include/dbus-1.0 -I/usr/lib/arm-linux-gnueabihf/dbus-1.0/include -I/usr/include/gtk-3.0 -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/lucene++ -DHAVE_PUGIXML -g -Wall -O0 -DwxNO_UNSAFE_WXSTRING_CONV=1 "-DPOEDIT_PREFIX=\"/usr\"" -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -o poedit attentionbar.o cat_update.o cat_sorting.o catalog.o catalog_po.o catalog_xliff.o chooselang.o colorscheme.o commentdlg.o concurrency.o configuration.o custom_buttons.o customcontrols.o custom_notebook.o edapp.o edframe.o editing_area.o edlistctrl.o export_html.o extractors/extractor.o extractors/extractor_gettext.o extractors/extractor_legacy.o filemonitor.o fileviewer.o findframe.o gexecute.o hidpi.o icons.o language.o languagectrl.o wx/main_toolbar.o manager.o menus.o pluralforms/pl_evaluate.o prefsdlg.o pretranslate.o progressinfo.o propertiesdlg.o qa_checks.o recent_files.o sidebar.o spellchecking.o syntaxhighlighter.o text_control.o titleless_window.o tm/suggestions.o tm/transmem.o tm/tmx_io.o unicode_helpers.o utility.o welcomescreen.o http_client.o http_client_casablanca.o crowdin_client.o crowdin_gui.o keychain/keytar_posix.o wx_backports/wx_gtk_activityindicator.o wx_backports/wx_gtk_nativewin.o compiled_xrc.o -L/usr/lib/arm-linux-gnueabihf -pthread -lwx_gtk3u_xrc-3.0 -lwx_baseu_xml-3.0 -lwx_gtk3u_webview-3.0 -lwx_gtk3u_adv-3.0 -lwx_gtk3u_core-3.0 -lwx_baseu_net-3.0 -lwx_baseu-3.0 -llucene++ -lcld2 -lpugixml -lcpprest -lboost_iostreams -lboost_thread -lpthread -lboost_system -lssl -lcrypto -lsecret-1 -lgio-2.0 -lgobject-2.0 -lglib-2.0 -L/usr/lib/arm-linux-gnueabihf -lboost_thread -lpthread -lboost_regex -lboost_system -licui18n -licuuc -licudata -lgtkspell3-3 -lenchant-2 -lgtk-3 -lgdk-3 -lpangocairo-1.0 -lpango-1.0 -lharfbuzz -latk-1.0 -lcairo-gobject -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lgobject-2.0 -lglib-2.0
/usr/bin/ld: progressinfo.o: undefined reference to symbol '__atomic_load_8@@LIBATOMIC_1.0'
/usr/bin/ld: /usr/lib/arm-linux-gnueabihf/libatomic.so.1: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile:658: poedit] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: *** [Makefile:484: all-recursive] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j4 returned exit code 2
make: *** [debian/rules:16: binary-arch] Error 25
/usr/bin/ld: ../lib/config/CMakeFiles/config.dir/config_parser.cc.o: in function `std::__atomic_base<unsigned long long>::fetch_add(unsigned long long, std::memory_order)':
/usr/include/c++/11/bits/atomic_base.h:636: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/11/bits/atomic_base.h:636: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: /usr/include/c++/11/bits/atomic_base.h:636: undefined reference to `__atomic_fetch_add_8'
/usr/bin/ld: ../lib/config/CMakeFiles/config.dir/config_parser.cc.o: in function `std::__atomic_base<unsigned long long>::fetch_sub(unsigned long long, std::memory_order)':
/usr/include/c++/11/bits/atomic_base.h:646: undefined reference to `__atomic_fetch_sub_8'
collect2: error: ld returned 1 exit status
make[3]: *** [test/CMakeFiles/boosttest-test-icinga_checkable.dir/build.make:163: Bin/None/boosttest-test-icinga_checkable] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: *** [CMakeFiles/Makefile2:2316: test/CMakeFiles/boosttest-test-icinga_checkable.dir/all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: *** [Makefile:169: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:17: build-arch] Error 25
from ./options/options_parser.h:10,
from options/options_parser.cc:8:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {}; _Tp = rocksdb::ColumnFamilyOptions; _Alloc = std::allocator<rocksdb::ColumnFamilyOptions>]':
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<rocksdb::ColumnFamilyOptions>::iterator' changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc: In member function 'rocksdb::Status rocksdb::RocksDBOptionsParser::EndSection(const rocksdb::ConfigOptions&, rocksdb::OptionSection, const string&, const string&, const std::unordered_map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<rocksdb::ColumnFamilyOptions*, std::vector<rocksdb::ColumnFamilyOptions> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j4 "INSTALL=install --strip-program=true" all returned exit code 2
make[1]: *** [debian/rules:19: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:29: build-arch] Error 2
Tail of log for pmake on armhf:
/usr/bin/ld: make_malloc.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: parse.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: str.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: suff.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: targ.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: trace.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: var.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: util.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
/usr/bin/ld: meta.o:./make.h:454: multiple definition of `debug_file'; arch.o:./make.h:454: first defined here
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile.boot:43: bmake] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: *** [debian/rules:30: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:24: build-arch] Error 2
Tail of log for apf on armhf:
01_doc_afclient.1 not applied to ./ .
rm -rf patch-stamp patch-stampT debian/patched
dh_testdir
dh_testroot
rm -f build-stamp
/usr/bin/make distclean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[1]: *** No rule to make target 'distclean'. Stop.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: [debian/rules:47: clean] Error 2 (ignored)
cp -f /usr/share/misc/config.sub config.sub
cp -f /usr/share/misc/config.guess config.guess
dh_clean
dh_clean: error: Compatibility levels before 7 are no longer supported (level 5 requested)
make: *** [debian/rules:50: clean] Error 25
* no linkedid in ast_channel_alloc
* found rtp_engine.h
* found ast_sockaddr structure
config.h complete.
gcc -pipe -fPIC -Wall -Wmissing-prototypes -Wmissing-declarations -g -I./divaverbose -I/usr/include -D_REENTRANT -D_GNU_SOURCE -Wno-unused-but-set-variable -O2 -fsigned-char -Wno-missing-prototypes -Wno-missing-declarations -DCRYPTO -c chan_capi.c -o chan_capi.o
In file included from chan_capi.c:32:
chan_capi.h:20:10: fatal error: asterisk/asterisk.h: No such file or directory
20 | #include <asterisk/asterisk.h>
| ^~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make[1]: *** [Makefile:198: chan_capi.o] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j1 returned exit code 2
make: *** [debian/rules:3: build-arch] Error 25
make[1]: Entering directory '/<<PKGBUILDDIR>>'
set -e; for i in lib daemon modules man samples; do /usr/bin/make -C $i all; done
make[2]: Entering directory '/<<PKGBUILDDIR>>/lib'
gcc -O2 -Wall -D_REENTRANT -D_FILE_OFFSET_BITS=64 -I../include -fPIC -D_GNU_SOURCE -DAUTOFS_MAP_DIR=\"/etc\" -DAUTOFS_CONF_DIR=\"/etc/default\" -c cache.c
In file included from ../include/automount.h:32,
from cache.c:26:
../include/rpc_subs.h:19:10: fatal error: rpc/rpc.h: No such file or directory
19 | #include <rpc/rpc.h>
| ^~~~~~~~~~~
compilation terminated.
make[2]: *** [../Makefile.rules:64: cache.o] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/lib'
make[1]: *** [Makefile:14: daemon] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:23: build.stamp] Error 2
Tail of log for criu on armhf:
DEP images/stats.pb-c.d
cc1: error: '-mfloat-abi=hard': selected architecture lacks an FPU
PBCC images/bpfmap-file.pb-c.c
cc1: error: '-mfloat-abi=hard': selected architecture lacks an FPU
PBCC images/memfd.pb-c.c
PBCC images/sit.pb-c.c
PBCC images/fsnotify.pb-c.c
PBCC images/core.pb-c.c
PBCC images/netdev.pb-c.c
PBCC images/fdinfo.pb-c.c
PBCC images/inventory.pb-c.c
make[2]: Nothing to be done for 'all'.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j4 "INSTALL=install --strip-program=true" returned exit code 2
make: *** [debian/rules:9: binary-arch] Error 25
Tail of log for davs2 on armhf:
make[1]: *** [Makefile:181: libdavs2.a] Error 1
make[1]: *** Waiting for unfinished jobs....
/usr/bin/ld: cannot find common/arm/blockcopy8.o: No such file or directory
/usr/bin/ld: cannot find common/arm/cpu-a.o: No such file or directory
/usr/bin/ld: cannot find common/arm/dct-a.o: No such file or directory
/usr/bin/ld: cannot find common/arm/ipfilter8.o: No such file or directory
/usr/bin/ld: cannot find common/arm/mc-a.o: No such file or directory
/usr/bin/ld: cannot find common/arm/pixel-util.o: No such file or directory
/usr/bin/ld: cannot find common/arm/sad-a.o: No such file or directory
/usr/bin/ld: cannot find common/arm/ssd-a.o: No such file or directory
collect2: error: ld returned 1 exit status
make[1]: *** [Makefile:186: libdavs2.so.16] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>/build/linux'
dh_auto_build: error: cd build/linux && make -j4 returned exit code 2
make: *** [debian/rules:9: binary-arch] Error 25
File "febootstrap_utils.ml", line 85, characters 42-46:
85 | really_input chan data 0 (String.length data);
^^^^
Error: This expression has type bytes but an expression was expected of type
string
make[4]: *** [Makefile:1275: febootstrap_utils.cmx] Error 2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: *** [Makefile:1058: all-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: *** [Makefile:996: all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j1 returned exit code 2
make[1]: *** [debian/rules:8: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:11: build-arch] Error 2
android/soong/partner/bpfix
android/soong/phony
android/soong/rust/config
android/soong/scripts
android/soong/symbol_inject/cmd
android/soong/xml
android/soong/zip/cmd
android/soong/sh
android/soong/rust
android/soong/java
android/soong/sysprop
android/soong/apex
android/soong/sdk
dh_auto_build: error: cd _build && go install -trimpath -v -p 4 android/soong android/soong/android android/soong/android/soongconfig android/soong/androidmk/androidmk android/soong/androidmk/cmd android/soong/androidmk/parser android/soong/apex android/soong/bpf android/soong/bpfix/bpfix android/soong/bpfix/cmd android/soong/bpfix/cmd_lib android/soong/cc android/soong/cc/config android/soong/cmd/dep_fixer android/soong/cmd/diff_target_files android/soong/cmd/extract_apks android/soong/cmd/extract_apks/bundle_proto android/soong/cmd/extract_jar_packages android/soong/cmd/extract_linker android/soong/cmd/fileslist android/soong/cmd/host_bionic_inject android/soong/cmd/javac_wrapper android/soong/cmd/merge_zips android/soong/cmd/multiproduct_kati android/soong/cmd/path_interposer android/soong/cmd/pom2bp android/soong/cmd/pom2mk android/soong/cmd/sbox android/soong/cmd/soong_build android/soong/cmd/soong_env android/soong/cmd/soong_ui android/soong/cmd/zip2zip android/soong/cmd/zipsync android/soong/cuj android/soong/dexpreopt android/soong/dexpreopt/dexpreopt_gen android/soong/env android/soong/etc android/soong/finder android/soong/finder/cmd android/soong/finder/fs android/soong/genrule android/soong/jar android/soong/java android/soong/java/config android/soong/makedeps android/soong/partner/androidmk android/soong/partner/bpfix android/soong/partner/bpfix/extensions android/soong/phony android/soong/python android/soong/remoteexec android/soong/rust android/soong/rust/config android/soong/scripts android/soong/sdk android/soong/sh android/soong/shared android/soong/symbol_inject android/soong/symbol_inject/cmd android/soong/sysprop android/soong/third_party/zip android/soong/tradefed android/soong/ui/build android/soong/ui/build/paths android/soong/ui/logger android/soong/ui/metrics android/soong/ui/metrics/metrics_proto android/soong/ui/metrics/upload_proto android/soong/ui/status android/soong/ui/status/build_error_proto android/soong/ui/status/build_progress_proto android/soong/ui/status/ninja_frontend android/soong/ui/terminal android/soong/ui/tracer android/soong/xml android/soong/zip android/soong/zip/cmd returned exit code 2
make: *** [debian/rules:6: binary-arch] Error 25
dpkg-gencontrol: warning: Suggests field of package libghc-pretty-simple-prof: substitution variable ${haskell:Suggests} used, but is not defined
dpkg-gencontrol: warning: Conflicts field of package libghc-pretty-simple-prof: substitution variable ${haskell:Conflicts} used, but is not defined
dpkg-gencontrol: warning: package libghc-pretty-simple-prof: substitution variable ${haskell:ghc-package} unused, but is defined
dpkg-gencontrol: warning: package libghc-pretty-simple-prof: substitution variable ${haskell:ghc-version} unused, but is defined
dh_md5sums -plibghc-pretty-simple-prof
dh_builddeb -plibghc-pretty-simple-prof
dpkg-deb: building package 'libghc-pretty-simple-prof' in '../libghc-pretty-simple-prof_3.2.3.0-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../haskell-pretty-simple_3.2.3.0-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../haskell-pretty-simple_3.2.3.0-1_armhf.changes
dpkg-genchanges: warning: substitution variable ${haskell:ShortDescription} used, but is not defined
dpkg-genchanges: warning: substitution variable ${haskell:ShortBlurb} used, but is not defined
dpkg-genchanges: warning: substitution variable ${haskell:ShortDescription} used, but is not defined
dpkg-genchanges: warning: substitution variable ${haskell:ShortBlurb} used, but is not defined
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
/usr/include/c++/12/bits/atomic_base.h:488: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/12/bits/atomic_base.h:488: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/12/bits/atomic_base.h:488: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/12/bits/atomic_base.h:488: undefined reference to `__atomic_load_8'
/usr/bin/ld: /usr/include/c++/12/bits/atomic_base.h:488: undefined reference to `__atomic_load_8'
/usr/bin/ld: CMakeFiles/objs.dir/src/UCTNodePointer.cpp.o:/usr/include/c++/12/bits/atomic_base.h:488: more undefined references to `__atomic_load_8' follow
collect2: error: ld returned 1 exit status
make[3]: *** [CMakeFiles/tests.dir/build.make:172: tests] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: *** [CMakeFiles/Makefile2:233: CMakeFiles/tests.dir/all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: *** [Makefile:159: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:15: build-arch] Error 25
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
QUILT_PATCHES=debian/patches \
quilt --quiltrc /dev/null pop -a -R || test $? = 2
No patch removed
rm -rf .pc debian/stamp-patched
dh_testdir
dh_testroot
rm -rf stamps objs
find build -type d -name "objs-*" | xargs rm -rf
rm -f build-stamp-*
dh_clean
dh_clean: warning: Compatibility levels before 10 are deprecated (level 7 in use)
debian/rules build-arch
make: *** No rule to make target 'build-arch'. Stop.
/usr/bin/cc -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include/mariadb -Wdate-time -D_FORTIFY_SOURCE=2 -DCHECK_FUNCTION_EXISTS=floor -Wl,-z,relro -rdynamic CMakeFiles/cmTC_a65ca.dir/CheckFunctionExists.c.o -o cmTC_a65ca
/usr/bin/ld: CMakeFiles/cmTC_a65ca.dir/CheckFunctionExists.c.o: in function `main':
/usr/share/cmake-3.22/Modules/CheckFunctionExists.c:17: undefined reference to `floor'
collect2: error: ld returned 1 exit status
gmake[3]: *** [CMakeFiles/cmTC_a65ca.dir/build.make:99: cmTC_a65ca] Error 1
gmake[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/CMakeTmp'
gmake[2]: *** [Makefile:127: cmTC_a65ca/fast] Error 2
gmake[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/CMakeTmp'
dh_auto_configure: error: cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DMARIADB_LINK_DYNAMIC=yes -DINSTALL_LIBDIR=lib/arm-linux-gnueabihf/odbc .. returned exit code 1
make[1]: *** [debian/rules:11: override_dh_auto_configure] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:8: build-arch] Error 2
Tail of log for mrs on armhf:
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/mrs-6.0.5+dfsg'
./configure --prefix=/usr --config-dir=/etc/mrs/ \
--man-dir=/usr/share/man --mrs-user=mrs-dba \
--data-dir=/var/lib/mrs --log-dir=/var/log/mrs
length() used on @boost_version (did you mean "scalar(@boost_version)"?) at ./configure line 289.
Using perl /usr/bin/perl
Checking for a compiler... OK
Checking for libboost... OK
Checking for libzeep...libzeep is not installed, either install the package libzeep-dev
or download libzeep from ftp://ftp.cmbi.ru.nl/pub/software/libzeep
and run configure again.
make[1]: *** [debian/rules:15: override_dh_auto_configure] Error 2
make[1]: Leaving directory '/<<BUILDDIR>>/mrs-6.0.5+dfsg'
make: *** [debian/rules:12: binary-arch] Error 2
libtool: link: (cd ".libs" && rm -f "libocxt.so" && ln -s "libocxt.so.0.0.0" "libocxt.so")
libtool: link: ( cd ".libs" && rm -f "libocxt.la" && ln -s "../libocxt.la" "libocxt.la" )
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/oc'
make[5]: *** [Makefile:563: all] Error 2
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/oc'
make[4]: *** [Makefile:520: all-recursive] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: *** [Makefile:658: all-recursive] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: *** [Makefile:516: all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j4 returned exit code 2
make[1]: *** [debian/rules:32: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:15: build-arch] Error 2
Tail of log for nsd3 on armhf:
XDG_SESSION_TYPE=unspecified
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package nsd3
dpkg-buildpackage: info: source version 3.2.16-3
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh: error: Compatibility levels before 7 are no longer supported (level 5 requested)
make: *** [debian/rules:26: clean] Error 25
Tail of log for patat on armhf:
patat: -Mgrace=<n>
patat: The amount of allocation after the program receives a
patat: HeapOverflow exception before the exception is thrown again, if
patat: the program is still exceeding the heap limit.
patat:
patat: RTS options may also be specified using the GHCRTS environment variable.
patat:
patat: Other RTS options may be available for programs compiled a different way.
patat: The GHC User's Guide has full details.
patat:
make[2]: *** [Makefile:80: extra/patat.bash-completion] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: *** [debian/rules:23: override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:12: build-arch] Error 2
qtjsbackend-opensource-src build-depends on missing:
- python:armhf
|
parse.c:10833:63: error: macro "yydestruct" passed 4 arguments, but takes just 3
10833 | this YYABORT or YYACCEPT. */
| ^
parse.c:4959: note: macro "yydestruct" defined here
4959 | #define yydestruct(m, t, v) ruby_parser_yydestruct(m, t, v, parser)
|
gcc -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector -fno-strict-overflow -fvisibility=hidden -DRUBY_EXPORT -Wdate-time -D_FORTIFY_SOURCE=2 -I. -I.ext/include/arm-linux-gnueabihf -I./include -I. -o compile.o -c compile.c
make[2]: *** [Makefile:334: parse.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j4 main V=1 returned exit code 2
make[1]: *** [debian/rules:67: override_dh_auto_build-arch] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:49: build-arch] Error 2
2: cmake::fail
at ./debian/cargo_registry/cmake-0.1.45/src/lib.rs:894:5
3: cmake::run
at ./debian/cargo_registry/cmake-0.1.45/src/lib.rs:872:9
4: cmake::Config::build
at ./debian/cargo_registry/cmake-0.1.45/src/lib.rs:707:13
5: build_script_build::main
at ./build.rs:23:15
6: core::ops::function::FnOnce::call_once
at /usr/src/rustc-1.63.0/library/core/src/ops/function.rs:248:5
note: Some details are omitted, run with `RUST_BACKTRACE=full` for a verbose backtrace.
dh_auto_test: error: /usr/share/cargo/bin/cargo test --all returned exit code 101
make[1]: *** [debian/rules:6: override_dh_auto_test] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:3: build-arch] Error 2
checking for dlfcn.h... yes
checking for dlopen in -ldl... yes
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking how to get verbose linking output from gfortran... -v
checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/12 -L/usr/lib/gcc/arm-linux-gnueabihf/12/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/12/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
checking for the slang library and header files ... no
configure: error: unable to find the slang library and header file slang.h
make: *** [/usr/share/cdbs/1/class/autotools.mk:46: debian/stamp-autotools] Error 1
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 80 in _hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 265 in __call__
File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 167 in main
File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 190 in console_main
File "/usr/lib/python3/dist-packages/pytest/__main__.py", line 5 in <module>
File "<frozen runpy>", line 88 in _run_code
File "<frozen runpy>", line 198 in _run_module_as_main
Extension modules: tinyarray, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, numpy.linalg.lapack_lite (total: 15)
Aborted
E: pybuild pybuild:388: test: plugin distutils failed with: exit code=134: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_tinyarray/build; python3.11 -m pytest ../../../test_tinyarray.py
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.11 --test-pytest --test-args=../../../test_tinyarray.py returned exit code 13
make[1]: *** [debian/rules:11: override_dh_auto_test] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:7: binary-arch] Error 2
cd "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/ioss/vtkioss" && /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DNO_PARMETIS_SUPPORT -DNO_ZOLTAN_SUPPORT -DOMPI_SKIP_MPICXX -DVTK_MODULE_ENABLE_VTK_mpi=1 -D_FILE_OFFSET_BITS=64 -D_MPICC_H -Dioss_EXPORTS -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/ioss/vtkioss" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss/vtkioss" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss/vtkioss/private_copy_fmt" -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/exodusII/vtkexodusII" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/exodusII/vtkexodusII" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/exodusII/vtkexodusII/include" -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/exodusII/vtkexodusII/include" -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/cgns/vtkcgns/src" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/cgns/vtkcgns/src" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/ioss" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/exodusII" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/exodusII" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/hdf5" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/hdf5" -isystem /usr/include/hdf5/serial -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/Utilities/MPI" -isystem "/<<PKGBUILDDIR>>/VTK/Utilities/MPI" -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/netcdf" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/netcdf" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/cgns" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/cgns" -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -pthread -std=c++11 -MD -MT VTK/ThirdParty/ioss/vtkioss/CMakeFiles/ioss.dir/Ioss_Tri4.C.o -MF CMakeFiles/ioss.dir/Ioss_Tri4.C.o.d -o CMakeFiles/ioss.dir/Ioss_Tri4.C.o -c "/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss/vtkioss/Ioss_Tri4.C"
[ 7%] Building CXX object VTK/ThirdParty/ioss/vtkioss/CMakeFiles/ioss.dir/Ioss_Tri6.C.o
cd "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/ioss/vtkioss" && /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -DMPICH_SKIP_MPICXX -DMPI_NO_CPPBIND -DNO_PARMETIS_SUPPORT -DNO_ZOLTAN_SUPPORT -DOMPI_SKIP_MPICXX -DVTK_MODULE_ENABLE_VTK_mpi=1 -D_FILE_OFFSET_BITS=64 -D_MPICC_H -Dioss_EXPORTS -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/ioss/vtkioss" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss/vtkioss" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss/vtkioss/private_copy_fmt" -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/exodusII/vtkexodusII" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/exodusII/vtkexodusII" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/exodusII/vtkexodusII/include" -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/exodusII/vtkexodusII/include" -I"/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/cgns/vtkcgns/src" -I"/<<PKGBUILDDIR>>/VTK/ThirdParty/cgns/vtkcgns/src" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/ioss" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/exodusII" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/exodusII" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/hdf5" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/hdf5" -isystem /usr/include/hdf5/serial -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/Utilities/MPI" -isystem "/<<PKGBUILDDIR>>/VTK/Utilities/MPI" -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/netcdf" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/netcdf" -isystem "/<<PKGBUILDDIR>>/build.python3.9/VTK/ThirdParty/cgns" -isystem "/<<PKGBUILDDIR>>/VTK/ThirdParty/cgns" -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -pthread -std=c++11 -MD -MT VTK/ThirdParty/ioss/vtkioss/CMakeFiles/ioss.dir/Ioss_Tri6.C.o -MF CMakeFiles/ioss.dir/Ioss_Tri6.C.o.d -o CMakeFiles/ioss.dir/Ioss_Tri6.C.o -c "/<<PKGBUILDDIR>>/VTK/ThirdParty/ioss/vtkioss/Ioss_Tri6.C"
The bug is not reproducible, so it is likely a hardware or OS problem.
make[4]: *** [VTK/ThirdParty/ioss/vtkioss/CMakeFiles/ioss.dir/build.make:905: VTK/ThirdParty/ioss/vtkioss/CMakeFiles/ioss.dir/Ioss_Region.C.o] Error 1
make[4]: *** Waiting for unfinished jobs....
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make[2]: *** [Makefile:149: all] Error 2
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dh_auto_build: error: cd build.python3.9 && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2
make[1]: *** [debian/rules:95: my_build_python3.9] Error 25
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:8: build-arch] Error 2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -DBOOST_ALLOW_DEPRECATED_HEADERS -DENABLE_AUTO -DKCOREADDONS_LIB -DKF_DEPRECATED_WARNINGS_SINCE=0x052400 -DKIOCORE_DEPRECATED_WARNINGS_SINCE=0x052400 -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_DBUS_LIB -DQT_DEPRECATED_WARNINGS -DQT_DISABLE_DEPRECATED_BEFORE=0x050800 -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_CAST_TO_ASCII -DQT_NO_DEBUG -DQT_NO_KEYWORDS -DQT_NO_PROCESS_COMBINED_ARGUMENT_START -DQT_NO_URL_CAST_FROM_STRING -DQT_PRINTSUPPORT_LIB -DQT_RESTRICTED_CAST_FROM_ASCII -DQT_WIDGETS_LIB -DQT_XML_LIB -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -D_LARGEFILE64_SOURCE -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src -I/<<PKGBUILDDIR>>/src -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src/kdiff3_autogen/include -isystem /usr/include/KF5/KConfigCore -isystem /usr/include/KF5 -isystem /usr/include/arm-linux-gnueabihf/qt5 -isystem /usr/include/arm-linux-gnueabihf/qt5/QtCore -isystem /usr/lib/arm-linux-gnueabihf/qt5/mkspecs/linux-g++ -isystem /usr/include/KF5/KConfigGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtGui -isystem /usr/include/arm-linux-gnueabihf/qt5/QtXml -isystem /usr/include/KF5/KParts -isystem /usr/include/KF5/KIOWidgets -isystem /usr/include/KF5/KIOGui -isystem /usr/include/KF5/KIOCore -isystem /usr/include/KF5/KCoreAddons -isystem /usr/include/KF5/KService -isystem /usr/include/arm-linux-gnueabihf/qt5/QtNetwork -isystem /usr/include/arm-linux-gnueabihf/qt5/QtDBus -isystem /usr/include/arm-linux-gnueabihf/qt5/QtConcurrent -isystem /usr/include/KF5/KWindowSystem -isystem /usr/include/arm-linux-gnueabihf/qt5/QtWidgets -isystem /usr/include/KF5/KJobWidgets -isystem /usr/include/KF5/Solid -isystem /usr/include/KF5/KCompletion -isystem /usr/include/KF5/KWidgetsAddons -isystem /usr/include/KF5/KXmlGui -isystem /usr/include/KF5/KConfigWidgets -isystem /usr/include/KF5/KCodecs -isystem /usr/include/KF5/KAuth -isystem /usr/include/KF5/KTextWidgets -isystem /usr/include/KF5/SonnetUi -isystem /usr/include/KF5/KI18n -isystem /usr/include/KF5/KCrash -isystem /usr/include/arm-linux-gnueabihf/qt5/QtPrintSupport -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-operator-names -fno-exceptions -Wall -Wextra -Wcast-align -Wchar-subscripts -Wformat-security -Wno-long-long -Wpointer-arith -Wundef -Wnon-virtual-dtor -Woverloaded-virtual -Werror=return-type -Werror=init-self -Wvla -Wdate-time -Wsuggest-override -Wlogical-op -Wall -Wno-trigraphs -Wduplicated-cond -Wduplicated-branches -Wshadow -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -std=gnu++11 -MD -MT src/CMakeFiles/kdiff3.dir/CommentParser.cpp.o -MF CMakeFiles/kdiff3.dir/CommentParser.cpp.o.d -o CMakeFiles/kdiff3.dir/CommentParser.cpp.o -c /<<PKGBUILDDIR>>/src/CommentParser.cpp
[ 99%] Linking CXX executable kdiff3
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/kdiff3.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fno-operator-names -fno-exceptions -Wall -Wextra -Wcast-align -Wchar-subscripts -Wformat-security -Wno-long-long -Wpointer-arith -Wundef -Wnon-virtual-dtor -Woverloaded-virtual -Werror=return-type -Werror=init-self -Wvla -Wdate-time -Wsuggest-override -Wlogical-op -Wall -Wno-trigraphs -Wduplicated-cond -Wduplicated-branches -Wshadow -Wl,--enable-new-dtags -Wl,-z,relro CMakeFiles/kdiff3.dir/kdiff3_autogen/mocs_compilation.cpp.o CMakeFiles/kdiff3.dir/main.cpp.o CMakeFiles/kdiff3.dir/kdiff3_shell.cpp.o CMakeFiles/kdiff3.dir/kdiff3_part.cpp.o CMakeFiles/kdiff3.dir/kdiff3.cpp.o CMakeFiles/kdiff3.dir/DirectoryInfo.cpp.o CMakeFiles/kdiff3.dir/directorymergewindow.cpp.o CMakeFiles/kdiff3.dir/merger.cpp.o CMakeFiles/kdiff3.dir/pdiff.cpp.o CMakeFiles/kdiff3.dir/difftextwindow.cpp.o CMakeFiles/kdiff3.dir/diff.cpp.o CMakeFiles/kdiff3.dir/optiondialog.cpp.o CMakeFiles/kdiff3.dir/mergeresultwindow.cpp.o CMakeFiles/kdiff3.dir/fileaccess.cpp.o CMakeFiles/kdiff3.dir/DefaultFileAccessJobHandler.cpp.o CMakeFiles/kdiff3.dir/gnudiff_analyze.cpp.o CMakeFiles/kdiff3.dir/gnudiff_io.cpp.o CMakeFiles/kdiff3.dir/gnudiff_xmalloc.cpp.o CMakeFiles/kdiff3.dir/common.cpp.o CMakeFiles/kdiff3.dir/smalldialogs.cpp.o CMakeFiles/kdiff3.dir/progress.cpp.o CMakeFiles/kdiff3.dir/ProgressProxyExtender.cpp.o CMakeFiles/kdiff3.dir/PixMapUtils.cpp.o CMakeFiles/kdiff3.dir/MergeFileInfos.cpp.o CMakeFiles/kdiff3.dir/Utils.cpp.o CMakeFiles/kdiff3.dir/selection.cpp.o CMakeFiles/kdiff3.dir/ignorelist.cpp.o CMakeFiles/kdiff3.dir/SourceData.cpp.o CMakeFiles/kdiff3.dir/Overview.cpp.o CMakeFiles/kdiff3.dir/Logging.cpp.o CMakeFiles/kdiff3.dir/FileNameLineEdit.cpp.o CMakeFiles/kdiff3.dir/MergeEditLine.cpp.o CMakeFiles/kdiff3.dir/Options.cpp.o CMakeFiles/kdiff3.dir/CommentParser.cpp.o -o kdiff3 /usr/lib/arm-linux-gnueabihf/libKF5Parts.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5KIOWidgets.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5KIOGui.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5KIOCore.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5Crash.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5JobWidgets.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5Service.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5Solid.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5WindowSystem.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libX11.so /usr/lib/arm-linux-gnueabihf/libQt5Concurrent.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libKF5XmlGui.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libQt5PrintSupport.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libQt5Network.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libKF5TextWidgets.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5Completion.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5ConfigWidgets.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5ConfigGui.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5ConfigCore.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libQt5Xml.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libKF5I18n.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5WidgetsAddons.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5Codecs.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5Auth.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5AuthCore.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libKF5CoreAddons.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libQt5DBus.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libKF5SonnetUi.so.5.90.0 /usr/lib/arm-linux-gnueabihf/libQt5Widgets.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libQt5Gui.so.5.15.2 /usr/lib/arm-linux-gnueabihf/libQt5Core.so.5.15.2
/usr/bin/ld: CMakeFiles/kdiff3.dir/progress.cpp.o: undefined reference to symbol '__atomic_load_8@@LIBATOMIC_1.0'
/usr/bin/ld: /usr/lib/arm-linux-gnueabihf/libatomic.so.1: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
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make[1]: *** [Makefile:149: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:11: binary-arch] Error 25
101 | return static_cast< QOpenGLFunctions_2_0*>(this);
| ^
| )
make[5]: *** [src/openms_gui/CMakeFiles/OpenMS_GUI.dir/build.make:221: src/openms_gui/CMakeFiles/OpenMS_GUI.dir/OpenMS_GUI_autogen/mocs_compilation.cpp.o] Error 1
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make[2]: *** [Makefile:676: GUI] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j1 "INSTALL=install --strip-program=true" OpenMS GUI TOPP UTILS VERBOSE=1 returned exit code 2
make[1]: *** [debian/rules:95: override_dh_auto_build] Error 25
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make: *** [debian/rules:43: build-arch] Error 2
- unknown
+ Yersinia (unknown species)
----------------------------------------------------------------------
Ran 219 tests in 652.259s
FAILED (failures=20)
{'Sul_acquired': 'sul2^', 'Tet_acquired': '-', 'Bla_acquired': '-', 'Bla_inhR_acquired': '-', 'Bla_ESBL_acquired': '-', 'Bla_ESBL_inhR_acquired': '-', 'Bla_Carb_acquired': '-', 'Bla_chr': '-', 'SHV_mutations': '-', 'Omp_mutations': 'OmpK35-0%;OmpK36-0%', 'Col_mutations': 'MgrB-0%;PmrB-0%', 'Flq_mutations': '-', 'truncated_resistance_hits': '-', 'spurious_resistance_hits': '-'}
{'Sul_acquired': '-', 'Tet_acquired': '-', 'Bla_acquired': '-', 'Bla_inhR_acquired': '-', 'Bla_ESBL_acquired': '-', 'Bla_ESBL_inhR_acquired': '-', 'Bla_Carb_acquired': '-', 'Bla_chr': 'OKP-B-6^', 'SHV_mutations': '-', 'Omp_mutations': 'OmpK35-0%;OmpK36-0%', 'Col_mutations': 'MgrB-0%;PmrB-0%', 'Flq_mutations': '-', 'truncated_resistance_hits': '-', 'spurious_resistance_hits': '-'}
{'Sul_acquired': '-', 'Tet_acquired': '-', 'Bla_acquired': '-', 'Bla_inhR_acquired': '-', 'Bla_ESBL_acquired': '-', 'Bla_ESBL_inhR_acquired': '-', 'Bla_Carb_acquired': '-', 'Bla_chr': 'OKP-B-6^', 'SHV_mutations': '-', 'Omp_mutations': 'OmpK35-0%;OmpK36-0%', 'Col_mutations': 'MgrB-0%;PmrB-0%', 'Flq_mutations': '-', 'truncated_resistance_hits': '-', 'spurious_resistance_hits': '-'}
{'Sul_acquired': '-', 'Tet_acquired': '-', 'Bla_acquired': '-', 'Bla_inhR_acquired': '-', 'Bla_ESBL_acquired': '-', 'Bla_ESBL_inhR_acquired': '-', 'Bla_Carb_acquired': '-', 'Bla_chr': 'OKP-B-6^', 'SHV_mutations': '-', 'Omp_mutations': 'OmpK35-0%;OmpK36-0%', 'Col_mutations': 'MgrB-0%;PmrB-0%', 'Flq_mutations': '-', 'truncated_resistance_hits': '-', 'spurious_resistance_hits': '-'}
E: pybuild pybuild:354: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9/build; python3.9 -m unittest discover -v
dh_auto_test: error: pybuild --test -i python{version} -p 3.9 returned exit code 13
make: *** [debian/rules:6: binary-arch] Error 25
/usr/bin/ld: ../libuuu/libuuc_s.a(usbhotplug.cpp.o): in function `std::atomic<std::chrono::duration<long long, std::ratio<1ll, 1ll> > >::store(std::chrono::duration<long long, std::ratio<1ll, 1ll> >, std::memory_order)':
/usr/include/c++/11/atomic:271: undefined reference to `__atomic_store_8'
/usr/bin/ld: ../libuuu/libuuc_s.a(usbhotplug.cpp.o): in function `std::atomic<std::chrono::duration<long long, std::ratio<1ll, 1000ll> > >::store(std::chrono::duration<long long, std::ratio<1ll, 1000ll> >, std::memory_order)':
/usr/include/c++/11/atomic:271: undefined reference to `__atomic_store_8'
/usr/bin/ld: ../libuuu/libuuc_s.a(usbhotplug.cpp.o): in function `std::atomic<std::chrono::duration<long long, std::ratio<1ll, 1ll> > >::store(std::chrono::duration<long long, std::ratio<1ll, 1ll> >, std::memory_order)':
/usr/include/c++/11/atomic:271: undefined reference to `__atomic_store_8'
collect2: error: ld returned 1 exit status
make[3]: *** [uuu/CMakeFiles/uuu.dir/build.make:180: uuu/uuu] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: *** [CMakeFiles/Makefile2:145: uuu/CMakeFiles/uuu.dir/all] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: *** [Makefile:139: all] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 returned exit code 2
make: *** [debian/rules:11: binary-arch] Error 25
FAILED skbio/stats/distance/tests/test_mantel.py::PairwiseMantelTests::test_many_filepaths_as_input
FAILED skbio/stats/distance/tests/test_mantel.py::PairwiseMantelTests::test_minimal_compatible_input
FAILED skbio/stats/distance/tests/test_mantel.py::PairwiseMantelTests::test_minimal_compatible_input_with_labels
FAILED skbio/stats/distance/tests/test_mantel.py::PairwiseMantelTests::test_na_p_value
FAILED skbio/stats/distance/tests/test_mantel.py::PairwiseMantelTests::test_reordered_distance_matrices
FAILED skbio/stats/distance/tests/test_mantel.py::PairwiseMantelTests::test_strict
FAILED skbio/stats/tests/test_subsample.py::SubsampleCountsTests::test_subsample_counts_nonrandom
FAILED skbio/stats/tests/test_subsample.py::SubsampleCountsTests::test_subsample_counts_without_replacement
FAILED skbio/stats/tests/test_subsample.py::ISubsampleTests::test_isubsample_simple
FAILED skbio/stats/tests/test_subsample.py::ISubsampleTests::test_per_sample_sequences_complex
FAILED skbio/stats/tests/test_subsample.py::ISubsampleTests::test_per_sample_sequences_min_seqs
=== 87 failed, 2231 passed, 30 skipped, 18017 warnings in 680.58s (0:11:20) ====
E: pybuild pybuild:354: test: plugin distutils failed with: exit code=1: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.9_skbio/build; python3.9 -m pytest
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.9 returned exit code 13
make: *** [debian/rules:13: binary-arch] Error 25
dpkg-shlibdeps: warning: symbol _ZN25vtkUnstructuredGridWriter3NewEv used by debian/libliggghts3/usr/lib/arm-linux-gnueabihf/libliggghts.so.3.8.0 found in none of the libraries
dh_installdeb -a -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.8.0\+repack1/debian/build
dh_gencontrol -a -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.8.0\+repack1/debian/build
dpkg-gencontrol: warning: Depends field of package libliggghts-dev: substitution variable ${shlibs:Depends} used, but is not defined
dh_md5sums -a -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.8.0\+repack1/debian/build
dh_builddeb -a -O--buildsystem=cmake -O--builddirectory=/<<BUILDDIR>>/liggghts-3.8.0\+repack1/debian/build
dpkg-deb: building package 'libliggghts-dev' in '../libliggghts-dev_3.8.0+repack1-9_armhf.deb'.
dpkg-deb: building package 'libliggghts3-dbgsym' in '../libliggghts3-dbgsym_3.8.0+repack1-9_armhf.deb'.
dpkg-deb: building package 'liggghts-dbgsym' in '../liggghts-dbgsym_3.8.0+repack1-9_armhf.deb'.
dpkg-deb: building package 'libliggghts3' in '../libliggghts3_3.8.0+repack1-9_armhf.deb'.
dpkg-deb: building package 'liggghts' in '../liggghts_3.8.0+repack1-9_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> >../liggghts_3.8.0+repack1-9_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
