yaha →
0.1.83-2 →
armhf → 2020-11-22 06:52:11
sbuild (Debian sbuild) 0.78.1 (09 February 2019) on test2019
+==============================================================================+
| yaha 0.1.83-2 (armhf) Sun, 22 Nov 2020 06:47:46 +0000 |
+==============================================================================+
Package: yaha
Version: 0.1.83-2
Source Version: 0.1.83-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-9cbe160c-f63c-4737-8f9e-ae323ace3638' with '<<CHROOT>>'
I: NOTICE: Log filtering will replace 'build/yaha-nlA38C/resolver-g9DT8R' with '<<RESOLVERDIR>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.9 MB]
Fetched 24.8 MB in 10s (2419 kB/s)
Reading package lists...
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| Fetch source files |
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Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'yaha' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/yaha.git
Please use:
git clone https://salsa.debian.org/med-team/yaha.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 104 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main yaha 0.1.83-2 (dsc) [1914 B]
Get:2 http://172.17.0.1/private bullseye-staging/main yaha 0.1.83-2 (tar) [104 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main yaha 0.1.83-2 (diff) [4592 B]
Fetched 104 MB in 23s (4584 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/yaha-nlA38C/yaha-0.1.83' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/yaha-nlA38C' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), build-essential, fakeroot
Filtered Build-Depends: debhelper-compat (= 13), build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<<RESOLVERDIR>>/apt_archive/sbuild-build-depends-main-dummy.deb'.
Ign:1 copy:/<<RESOLVERDIR>>/apt_archive ./ InRelease
Get:2 copy:/<<RESOLVERDIR>>/apt_archive ./ Release [957 B]
Ign:3 copy:/<<RESOLVERDIR>>/apt_archive ./ Release.gpg
Get:4 copy:/<<RESOLVERDIR>>/apt_archive ./ Sources [370 B]
Get:5 copy:/<<RESOLVERDIR>>/apt_archive ./ Packages [450 B]
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Reading package lists...
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Install main build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl
libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
libxml2 m4 man-db po-debconf sensible-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl
libelf1 libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc
libmagic1 libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0
libxml2 m4 man-db po-debconf sbuild-build-depends-main-dummy sensible-utils
0 upgraded, 34 newly installed, 0 to remove and 4 not upgraded.
Need to get 18.6 MB of archives.
After this operation, 68.4 MB of additional disk space will be used.
Get:1 copy:/<<RESOLVERDIR>>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [876 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf bsdextrautils armhf 2.36-3 [132 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.2.1 [188 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.2-1 [1176 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.2 [578 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.2.1 [1007 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 18.6 MB in 3s (5504 kB/s)
Selecting previously unselected package bsdextrautils.
(Reading database ... 12445 files and directories currently installed.)
Preparing to unpack .../00-bsdextrautils_2.36-3_armhf.deb ...
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Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.36-3) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:armhf (67.1-4) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglib2.0-0:armhf (2.66.2-1) ...
No schema files found: doing nothing.
Setting up libdebhelper-perl (13.2.1) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up file (1:5.38-5) ...
Setting up autotools-dev (20180224.1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.2) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up libtool (2.4.6-14) ...
Setting up m4 (1.4.18-4) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up po-debconf (1.0.21) ...
Setting up debhelper (13.2.1) ...
Setting up dh-autoreconf (19) ...
Setting up sbuild-build-depends-main-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.31-4+rpi1) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.19.20-v7+ #1 SMP Mon Mar 18 11:37:02 GMT 2019 armhf (armv7l)
Toolchain package versions: binutils_2.35.1-2+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-16+rpi1 gcc-10_10.2.0-16+rpi1 libc6-dev_2.31-4+rpi1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 linux-libc-dev_5.7.10-1+rpi1
Package versions: adduser_3.118 apt_2.1.11 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc2-1 binutils_2.35.1-2+rpi1 binutils-arm-linux-gnueabihf_2.35.1-2+rpi1 binutils-common_2.35.1-2+rpi1 bsdextrautils_2.36-3 bsdutils_1:2.36-3 build-essential_12.8 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-16+rpi1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.2.1 debianutils_4.11.2 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1 file_1:5.38-5 findutils_4.7.0+git20201010-2 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-16+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-16+rpi1 gcc-10-base_10.2.0-16+rpi1 gcc-7-base_7.5.0-6+rpi1+b1 gcc-8-base_8.4.0-4+rpi1+b1 gcc-9-base_9.3.0-18+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg6.0_2.1.11 libarchive-zip-perl_1.68-1 libasan6_10.2.0-16+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-16+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1 libbinutils_2.35.1-2+rpi1 libblkid1_2.36-3 libbz2-1.0_1.0.8-4 libc-bin_2.31-4+rpi1 libc-dev-bin_2.31-4+rpi1 libc6_2.31-4+rpi1 libc6-dev_2.31-4+rpi1 libcap-ng0_0.7.9-2.2 libcc1-0_10.2.0-16+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-2+rpi1 libctf0_2.35.1-2+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.255 libdebhelper-perl_13.2.1 libdpkg-perl_1.20.5+rpi1 libelf1_0.182-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1 libffi7_3.3-5 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-16+rpi1 libgcc-s1_10.2.0-16+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libglib2.0-0_2.66.2-1 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.15-4 libgomp1_10.2.0-16+rpi1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10+b3 libhogweed6_3.6-2 libicu67_67.1-4 libidn2-0_2.3.0-3 libisl22_0.22.1-1 libk5crypto3_1.17-10+b3 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10+b3 libkrb5support0_1.17-10+b3 libksba8_1.4.0-2 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-3 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20200918-1 libnettle8_3.6-2 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libp11-kit0_0.23.21-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.32_5.32.0-5 libpipeline1_1.5.3-1 libreadline8_8.1~rc2-2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2 libsmartcols1_2.36-3 libsqlite3-0_3.33.0-1 libss2_1.45.6-1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-16+rpi1 libstdc++6_10.2.0-16+rpi1 libsub-override-perl_0.09-2 libsystemd0_246.6-2+rpi1 libtasn1-6_4.16.0-2 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20200918-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-2+rpi1 libunistring2_0.9.10-4 libuuid1_2.36-3 libxml2_2.9.10+dfsg-6.2 libzstd1_1.4.5+dfsg-4+rpi1 linux-libc-dev_5.7.10-1+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-3 ncurses-base_6.2+20200918-1 ncurses-bin_6.2+20200918-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc2-2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-5 tar_1.30+dfsg-7 tzdata_2020d-1 util-linux_2.36-3 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 3.0 (quilt)
Source: yaha
Binary: yaha
Architecture: any
Version: 0.1.83-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Homepage: https://github.com/GregoryFaust/yaha
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/yaha
Vcs-Git: https://salsa.debian.org/med-team/yaha.git
Build-Depends: debhelper-compat (= 13)
Package-List:
yaha deb science optional arch=any
Checksums-Sha1:
df230e7cf1745ee30a8f67d07c136e08f9d12038 104294292 yaha_0.1.83.orig.tar.gz
05ecc00db782728fd20834bdb0515929989a9f0b 4592 yaha_0.1.83-2.debian.tar.xz
Checksums-Sha256:
76e052cd92630c6e9871412e37e46f18bfbbf7fc5dd2f345b3b9a73eb74939ef 104294292 yaha_0.1.83.orig.tar.gz
4864340fe1bb20f7d3745f65dd4d8aefee1c784665dbf7cfb4f5278d52cceee3 4592 yaha_0.1.83-2.debian.tar.xz
Files:
1641c06cdb57a8220c9fa1e1aaa5e531 104294292 yaha_0.1.83.orig.tar.gz
da835ebc49cf161dc59d2a2963b1239d 4592 yaha_0.1.83-2.debian.tar.xz
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gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.bnhu6AbL/trustedkeys.kbx': General error
gpgv: Signature made Mon Nov 16 17:57:16 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./yaha_0.1.83-2.dsc
dpkg-source: info: extracting yaha in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking yaha_0.1.83.orig.tar.gz
dpkg-source: info: unpacking yaha_0.1.83-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying Makefile.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=1ec3ff19654148fab3a02153247d5928
JOURNAL_STREAM=8:145870
LANG=en_GB.UTF-8
LC_ALL=C.UTF-8
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=117
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-9cbe160c-f63c-4737-8f9e-ae323ace3638
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_CLASS=background
XDG_SESSION_ID=c15770
XDG_SESSION_TYPE=unspecified
dpkg-buildpackage
-----------------
Command: dpkg-buildpackage -us -uc -mRaspbian pi4 based autobuilder <root@raspbian.org> -B -rfakeroot
dpkg-buildpackage: info: source package yaha
dpkg-buildpackage: info: source version 0.1.83-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_auto_clean
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -Rf obj
rm -Rf bin
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/yaha.substvars debian/files
rm -fr -- debian/yaha/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
install -d /<<PKGBUILDDIR>>/debian/.debhelper/generated/_source/home
dh_auto_build -a
make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p obj
mkdir -p bin
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/Main.c -o obj/Main.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/AlignArgs.c -o obj/AlignArgs.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/AlignHelpers.c -o obj/AlignHelpers.o
g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -c src/AlignExtFrag.cpp -o obj/AlignExtFrag.o
src/Main.c: In function ‘main’:
src/Main.c:640:54: warning: format ‘%zd’ expects argument of type ‘signed size_t’, but argument 3 has type ‘long int’ [-Wformat=]
640 | fprintf(stderr, "Number of non-IO page faults: %zd, Number of IO page faults: %zd.\n", usagebuf.ru_minflt, usagebuf.ru_majflt);
| ~~^ ~~~~~~~~~~~~~~~~~~
| | |
| int long int
| %ld
src/Main.c:640:85: warning: format ‘%zd’ expects argument of type ‘signed size_t’, but argument 4 has type ‘long int’ [-Wformat=]
640 | fprintf(stderr, "Number of non-IO page faults: %zd, Number of IO page faults: %zd.\n", usagebuf.ru_minflt, usagebuf.ru_majflt);
| ~~^ ~~~~~~~~~~~~~~~~~~
| | |
| int long int
| %ld
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/AlignOutput.c -o obj/AlignOutput.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/BaseSeq.c -o obj/BaseSeq.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/Compress.c -o obj/Compress.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/FileHelpers.c -o obj/FileHelpers.o
g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -c src/GraphPath.cpp -o obj/GraphPath.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/Index.c -o obj/Index.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/Query.c -o obj/Query.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/QueryMatch.c -o obj/QueryMatch.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/QueryState.c -o obj/QueryState.o
g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -fpermissive -c src/SW.cpp -o obj/SW.o
cc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -D BUILDNUM=83 -MMD -MP -c src/Math.c -o obj/Math.o
src/SW.cpp:799:5: warning: redeclaration of ‘template<unsigned char banded, unsigned char extension, unsigned char reverse, unsigned char XCutoff> int findAffineGapScore(QueryState_t*, char*, SUINT, char*, SUINT, EditOpList_t*, SUINT*, SUINT*)’ may not have default arguments [-fpermissive]
799 | int findAffineGapScore(QueryState_t * QS, char * qStr, SUINT qLen, char * rStr, SUINT rLen, EditOpList_t * list, SUINT * addedQLen = NULL, SUINT * addedRLen = NULL)
| ^~~~~~~~~~~~~~~~~~
g++ -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -pthread -o bin/yaha obj/Main.o obj/AlignArgs.o obj/AlignHelpers.o obj/AlignExtFrag.o obj/AlignOutput.o obj/BaseSeq.o obj/Compress.o obj/FileHelpers.o obj/GraphPath.o obj/Index.o obj/Query.o obj/QueryMatch.o obj/QueryState.o obj/SW.o obj/Math.o
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
rm -fr -- /tmp/dh-xdg-rundir-wp6s1wgg
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
rm -f -- debian/yaha.substvars
rm -fr -- debian/.debhelper/generated/yaha/ debian/yaha/ debian/tmp/
dh_auto_install -a
install -d /<<PKGBUILDDIR>>/debian/yaha
dh_install -a
install -d debian/yaha/usr/bin
cp --reflink=auto -a ./bin/yaha debian/yaha/usr/bin/
install -d debian/.debhelper/generated/yaha
dh_installdocs -a
install -d debian/yaha/usr/share/doc/yaha
install -p -m0644 debian/copyright debian/yaha/usr/share/doc/yaha/copyright
dh_installchangelogs -a
install -p -m0644 debian/changelog debian/yaha/usr/share/doc/yaha/changelog.Debian
dh_installman -a
install -d debian/yaha/usr/share/man/man1/
install -p -m0644 ./debian/yaha.1 debian/yaha/usr/share/man/man1/yaha.1
man-recode --to-code UTF-8 --suffix .dh-new debian/yaha/usr/share/man/man1/yaha.1
mv debian/yaha/usr/share/man/man1/yaha.1.dh-new debian/yaha/usr/share/man/man1/yaha.1
chmod 0644 -- debian/yaha/usr/share/man/man1/yaha.1
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
cd debian/yaha
chmod a-x usr/share/doc/yaha/changelog.Debian usr/share/man/man1/yaha.1
gzip -9nf usr/share/doc/yaha/changelog.Debian usr/share/man/man1/yaha.1
cd '/<<PKGBUILDDIR>>'
dh_fixperms -a
find debian/yaha ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/yaha/usr/share/doc -type f -a -true -a ! -regex 'debian/yaha/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/yaha/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/yaha/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/yaha -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/yaha/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
dh_missing -a
dh_dwz -a -a
dwz -- debian/yaha/usr/bin/yaha
dh_strip -a -a
install -d debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/ad
objcopy --only-keep-debug --compress-debug-sections debian/yaha/usr/bin/yaha debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/ad/1a2df626b11bf484e8681f88e4900c358651ef.debug
chmod 0644 -- debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/ad/1a2df626b11bf484e8681f88e4900c358651ef.debug
strip --remove-section=.comment --remove-section=.note debian/yaha/usr/bin/yaha
objcopy --add-gnu-debuglink debian/.debhelper/yaha/dbgsym-root/usr/lib/debug/.build-id/ad/1a2df626b11bf484e8681f88e4900c358651ef.debug debian/yaha/usr/bin/yaha
install -d debian/.debhelper/yaha/dbgsym-root/usr/share/doc
ln -s yaha debian/.debhelper/yaha/dbgsym-root/usr/share/doc/yaha-dbgsym
dh_makeshlibs -a -a
rm -f debian/yaha/DEBIAN/shlibs
dh_shlibdeps -a -a
install -d debian/yaha/DEBIAN
dpkg-shlibdeps -Tdebian/yaha.substvars debian/yaha/usr/bin/yaha
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/yaha/usr/bin/yaha was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
echo misc:Depends= >> debian/yaha.substvars
echo misc:Pre-Depends= >> debian/yaha.substvars
install -d debian/.debhelper/yaha/dbgsym-root/DEBIAN
dpkg-gencontrol -pyaha -ldebian/changelog -Tdebian/yaha.substvars -Pdebian/.debhelper/yaha/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=yaha-dbgsym "-DDepends=yaha (= \${binary:Version})" "-DDescription=debug symbols for yaha" -DBuild-Ids=ad1a2df626b11bf484e8681f88e4900c358651ef -DSection=debug -UMulti-Arch -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/yaha/dbgsym-root/DEBIAN/control
dpkg-gencontrol -pyaha -ldebian/changelog -Tdebian/yaha.substvars -Pdebian/yaha
chmod 0644 -- debian/yaha/DEBIAN/control
dh_md5sums -a
cd debian/yaha >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/yaha/DEBIAN/md5sums
cd debian/.debhelper/yaha/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/yaha/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a
dpkg-deb --root-owner-group --build debian/yaha ..
dpkg-deb --root-owner-group --build debian/.debhelper/yaha/dbgsym-root ..
dpkg-deb: building package 'yaha' in '../yaha_0.1.83-2_armhf.deb'.
dpkg-deb: building package 'yaha-dbgsym' in '../yaha-dbgsym_0.1.83-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian pi4 based autobuilder <root@raspbian.org> >../yaha_0.1.83-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-11-22T06:52:02Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
yaha_0.1.83-2_armhf.changes:
----------------------------
Format: 1.8
Date: Mon, 16 Nov 2020 18:46:33 +0100
Source: yaha
Binary: yaha yaha-dbgsym
Architecture: armhf
Version: 0.1.83-2
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian pi4 based autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
yaha - find split-read mappings on single-end queries
Changes:
yaha (0.1.83-2) unstable; urgency=medium
.
* Team upload.
* Standards-Version: 4.5.0 (routine-update)
* debhelper-compat 13 (routine-update)
* Remove trailing whitespace in debian/copyright (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Trim trailing whitespace.
* Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
Repository-Browse.
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Files:
724b8adad6b9de66dc0424919b4ff430 154140 debug optional yaha-dbgsym_0.1.83-2_armhf.deb
995a823084173e5d35c89ba7b5319786 4955 science optional yaha_0.1.83-2_armhf.buildinfo
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+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: yaha
Binary: yaha yaha-dbgsym
Architecture: armhf
Version: 0.1.83-2
Checksums-Md5:
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Checksums-Sha1:
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Checksums-Sha256:
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2901b4a6f928797c4ca27190cfc3291453e59854b75fb562faac477d9e09183d 35592 yaha_0.1.83-2_armhf.deb
Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Sun, 22 Nov 2020 06:52:01 +0000
Build-Path: /<<PKGBUILDDIR>>
Installed-Build-Depends:
autoconf (= 2.69-11.1),
automake (= 1:1.16.2-4),
autopoint (= 0.19.8.1-10),
autotools-dev (= 20180224.1),
base-files (= 11+rpi1),
base-passwd (= 3.5.48),
bash (= 5.1~rc2-1),
binutils (= 2.35.1-2+rpi1),
binutils-arm-linux-gnueabihf (= 2.35.1-2+rpi1),
binutils-common (= 2.35.1-2+rpi1),
bsdextrautils (= 2.36-3),
bsdutils (= 1:2.36-3),
build-essential (= 12.8),
bzip2 (= 1.0.8-4),
coreutils (= 8.32-4),
cpp (= 4:10.2.0-1+rpi1),
cpp-10 (= 10.2.0-16+rpi1),
dash (= 0.5.11+git20200708+dd9ef66-2),
debconf (= 1.5.74),
debhelper (= 13.2.1),
debianutils (= 4.11.2),
dh-autoreconf (= 19),
dh-strip-nondeterminism (= 1.9.0-1),
diffutils (= 1:3.7-3),
dpkg (= 1.20.5+rpi1),
dpkg-dev (= 1.20.5+rpi1),
dwz (= 0.13-5),
file (= 1:5.38-5),
findutils (= 4.7.0+git20201010-2),
g++ (= 4:10.2.0-1+rpi1),
g++-10 (= 10.2.0-16+rpi1),
gcc (= 4:10.2.0-1+rpi1),
gcc-10 (= 10.2.0-16+rpi1),
gcc-10-base (= 10.2.0-16+rpi1),
gettext (= 0.19.8.1-10),
gettext-base (= 0.19.8.1-10),
grep (= 3.6-1),
groff-base (= 1.22.4-5),
gzip (= 1.10-2),
hostname (= 3.23),
init-system-helpers (= 1.58),
intltool-debian (= 0.35.0+20060710.5),
libacl1 (= 2.2.53-8),
libarchive-zip-perl (= 1.68-1),
libasan6 (= 10.2.0-16+rpi1),
libatomic1 (= 10.2.0-16+rpi1),
libattr1 (= 1:2.4.48-5),
libaudit-common (= 1:2.8.5-3.1),
libaudit1 (= 1:2.8.5-3.1),
libbinutils (= 2.35.1-2+rpi1),
libblkid1 (= 2.36-3),
libbz2-1.0 (= 1.0.8-4),
libc-bin (= 2.31-4+rpi1),
libc-dev-bin (= 2.31-4+rpi1),
libc6 (= 2.31-4+rpi1),
libc6-dev (= 2.31-4+rpi1),
libcap-ng0 (= 0.7.9-2.2),
libcc1-0 (= 10.2.0-16+rpi1),
libcom-err2 (= 1.45.6-1),
libcroco3 (= 0.6.13-1),
libcrypt-dev (= 1:4.4.17-1),
libcrypt1 (= 1:4.4.17-1),
libctf-nobfd0 (= 2.35.1-2+rpi1),
libctf0 (= 2.35.1-2+rpi1),
libdb5.3 (= 5.3.28+dfsg1-0.6),
libdebconfclient0 (= 0.255),
libdebhelper-perl (= 13.2.1),
libdpkg-perl (= 1.20.5+rpi1),
libelf1 (= 0.182-1),
libffi7 (= 3.3-5),
libfile-stripnondeterminism-perl (= 1.9.0-1),
libgcc-10-dev (= 10.2.0-16+rpi1),
libgcc-s1 (= 10.2.0-16+rpi1),
libgcrypt20 (= 1.8.7-2),
libgdbm-compat4 (= 1.18.1-5.1),
libgdbm6 (= 1.18.1-5.1),
libglib2.0-0 (= 2.66.2-1),
libgmp10 (= 2:6.2.0+dfsg-6),
libgomp1 (= 10.2.0-16+rpi1),
libgpg-error0 (= 1.38-2),
libgssapi-krb5-2 (= 1.17-10+b3),
libicu67 (= 67.1-4),
libisl22 (= 0.22.1-1),
libk5crypto3 (= 1.17-10+b3),
libkeyutils1 (= 1.6.1-2),
libkrb5-3 (= 1.17-10+b3),
libkrb5support0 (= 1.17-10+b3),
liblz4-1 (= 1.9.2-2),
liblzma5 (= 5.2.4-1),
libmagic-mgc (= 1:5.38-5),
libmagic1 (= 1:5.38-5),
libmount1 (= 2.36-3),
libmpc3 (= 1.2.0-1),
libmpfr6 (= 4.1.0-3),
libnsl-dev (= 1.3.0-2),
libnsl2 (= 1.3.0-2),
libnss-nis (= 3.1-4),
libnss-nisplus (= 1.3-4),
libpam-modules (= 1.3.1-5),
libpam-modules-bin (= 1.3.1-5),
libpam-runtime (= 1.3.1-5),
libpam0g (= 1.3.1-5),
libpcre2-8-0 (= 10.34-7),
libpcre3 (= 2:8.39-13),
libperl5.32 (= 5.32.0-5),
libpipeline1 (= 1.5.3-1),
libseccomp2 (= 2.5.0-3+rpi1),
libselinux1 (= 3.1-2),
libsigsegv2 (= 2.12-2),
libsmartcols1 (= 2.36-3),
libssl1.1 (= 1.1.1h-1),
libstdc++-10-dev (= 10.2.0-16+rpi1),
libstdc++6 (= 10.2.0-16+rpi1),
libsub-override-perl (= 0.09-2),
libsystemd0 (= 246.6-2+rpi1),
libtinfo6 (= 6.2+20200918-1),
libtirpc-common (= 1.2.6-3),
libtirpc-dev (= 1.2.6-3),
libtirpc3 (= 1.2.6-3),
libtool (= 2.4.6-14),
libubsan1 (= 10.2.0-16+rpi1),
libuchardet0 (= 0.0.7-1),
libudev1 (= 246.6-2+rpi1),
libunistring2 (= 0.9.10-4),
libuuid1 (= 2.36-3),
libxml2 (= 2.9.10+dfsg-6.2),
libzstd1 (= 1.4.5+dfsg-4+rpi1),
linux-libc-dev (= 5.7.10-1+rpi1),
login (= 1:4.8.1-1),
lsb-base (= 11.1.0+rpi1),
m4 (= 1.4.18-4),
make (= 4.3-4),
man-db (= 2.9.3-2),
mawk (= 1.3.4.20200120-2),
ncurses-base (= 6.2+20200918-1),
ncurses-bin (= 6.2+20200918-1),
patch (= 2.7.6-6),
perl (= 5.32.0-5),
perl-base (= 5.32.0-5),
perl-modules-5.32 (= 5.32.0-5),
po-debconf (= 1.0.21),
sed (= 4.7-1),
sensible-utils (= 0.0.12+nmu1),
sysvinit-utils (= 2.96-5),
tar (= 1.30+dfsg-7),
util-linux (= 2.36-3),
xz-utils (= 5.2.4-1),
zlib1g (= 1:1.2.11.dfsg-2)
Environment:
DEB_BUILD_OPTIONS="parallel=4"
LANG="en_GB.UTF-8"
LC_ALL="C.UTF-8"
SOURCE_DATE_EPOCH="1605548793"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
yaha-dbgsym_0.1.83-2_armhf.deb
------------------------------
new Debian package, version 2.0.
size 154140 bytes: control archive=532 bytes.
360 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: yaha-dbgsym
Source: yaha
Version: 0.1.83-2
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 172
Depends: yaha (= 0.1.83-2)
Section: debug
Priority: optional
Description: debug symbols for yaha
Build-Ids: ad1a2df626b11bf484e8681f88e4900c358651ef
drwxr-xr-x root/root 0 2020-11-16 17:46 ./
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/lib/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/lib/debug/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/lib/debug/.build-id/ad/
-rw-r--r-- root/root 164952 2020-11-16 17:46 ./usr/lib/debug/.build-id/ad/1a2df626b11bf484e8681f88e4900c358651ef.debug
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/doc/
lrwxrwxrwx root/root 0 2020-11-16 17:46 ./usr/share/doc/yaha-dbgsym -> yaha
yaha_0.1.83-2_armhf.deb
-----------------------
new Debian package, version 2.0.
size 35592 bytes: control archive=1064 bytes.
1126 bytes, 23 lines control
246 bytes, 4 lines md5sums
Package: yaha
Version: 0.1.83-2
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 88
Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5)
Section: science
Priority: optional
Homepage: https://github.com/GregoryFaust/yaha
Description: find split-read mappings on single-end queries
yaha is an open source, flexible, sensitive and accurate DNA aligner
designed for single-end reads. It supports three major modes of
operation:
* The default “Optimal Query Coverage” (-OQC) mode reports the
best set of alignments that cover the length of each query.
* Using “Filter By Similarity” (-FBS), along with the best set of
alignments, yaha will also output alignments that are highly similar
to an alignment in the best set.
* Finally, yaha can output all the alignments found for each query.
The -OQC and -FBS modes are specifically tuned to form split read
mappings that can be used to accurately identify structural variation
events (deletions, duplications, insertions or inversions) between the
subject query and the reference genome.
drwxr-xr-x root/root 0 2020-11-16 17:46 ./
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/bin/
-rwxr-xr-x root/root 75720 2020-11-16 17:46 ./usr/bin/yaha
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/doc/yaha/
-rw-r--r-- root/root 388 2020-11-16 17:46 ./usr/share/doc/yaha/changelog.Debian.gz
-rw-r--r-- root/root 1340 2020-11-16 17:46 ./usr/share/doc/yaha/copyright
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/man/
drwxr-xr-x root/root 0 2020-11-16 17:46 ./usr/share/man/man1/
-rw-r--r-- root/root 1338 2020-11-16 17:46 ./usr/share/man/man1/yaha.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 118952
Build-Time: 18
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 187
Job: yaha_0.1.83-2
Machine Architecture: armhf
Package: yaha
Package-Time: 256
Source-Version: 0.1.83-2
Space: 118952
Status: successful
Version: 0.1.83-2
--------------------------------------------------------------------------------
Finished at 2020-11-22T06:52:02Z
Build needed 00:04:16, 118952k disk space