umis →
1.0.8-1+b1 →
armhf → 2022-04-21 20:44:26
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard
+==============================================================================+
| umis 1.0.8-1+b1 (armhf) Thu, 21 Apr 2022 20:32:53 +0000 |
+==============================================================================+
Package: umis
Version: 1.0.8-1+b1
Source Version: 1.0.8-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-745e125a-4c7c-441a-98dd-c34f3a79fd42' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.0 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [13.9 MB]
Fetched 26.8 MB in 30s (882 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'umis' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/umis.git
Please use:
git clone https://salsa.debian.org/med-team/umis.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 255 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main umis 1.0.8-1 (dsc) [2060 B]
Get:2 http://172.17.4.1/private bookworm-staging/main umis 1.0.8-1 (tar) [248 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main umis 1.0.8-1 (diff) [5032 B]
Fetched 255 kB in 0s (1454 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/umis-hOIUQS/umis-1.0.8' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/umis-hOIUQS' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-uP3TAz/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-uP3TAz/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-uP3TAz/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2749 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 52 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (23.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12608 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-python, cython3, python3-dev, python3-setuptools, python3-pysam
Filtered Build-Depends: debhelper-compat (= 13), dh-python, cython3, python3-dev, python3-setuptools, python3-pysam
dpkg-deb: building package 'sbuild-build-depends-umis-dummy' in '/<<BUILDDIR>>/resolver-uP3TAz/apt_archive/sbuild-build-depends-umis-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-umis-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Sources [526 B]
Get:5 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ Packages [602 B]
Fetched 2461 B in 1s (3320 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install umis build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libbrotli1
libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1
libexpat1-dev libfile-stripnondeterminism-perl libhts3 libhtscodecs2
libicu67 libjs-jquery libjs-sphinxdoc libjs-underscore libmagic-mgc
libmagic1 libmpdec3 libnghttp2-14 libpipeline1 libpsl5 libpython3-dev
libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal
libpython3.10-stdlib librtmp1 libsigsegv2 libsmartcols1 libssh2-1
libsub-override-perl libtool libuchardet0 libxml2 m4 man-db media-types
po-debconf python3 python3-dev python3-distutils python3-lib2to3
python3-minimal python3-pkg-resources python3-pysam python3-setuptools
python3.10 python3.10-dev python3.10-minimal zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cython-doc dh-make flit
python3-build python3-tomli python3-installer gettext-doc libasprintf-dev
libgettextpo-dev groff libtool-doc gfortran | fortran95-compiler gcj-jdk
m4-doc apparmor less www-browser libmail-box-perl python3-doc python3-tk
python3-venv python-setuptools-doc python3.10-venv python3.10-doc
binfmt-support
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl javascript-common
publicsuffix libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils cython3 debhelper
dh-autoreconf dh-python dh-strip-nondeterminism dwz file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libbrotli1
libcurl3-gnutls libdebhelper-perl libdeflate0 libelf1 libexpat1
libexpat1-dev libfile-stripnondeterminism-perl libhts3 libhtscodecs2
libicu67 libjs-jquery libjs-sphinxdoc libjs-underscore libmagic-mgc
libmagic1 libmpdec3 libnghttp2-14 libpipeline1 libpsl5 libpython3-dev
libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal
libpython3.10-stdlib librtmp1 libsigsegv2 libssh2-1 libsub-override-perl
libtool libuchardet0 libxml2 m4 man-db media-types po-debconf python3
python3-dev python3-distutils python3-lib2to3 python3-minimal
python3-pkg-resources python3-pysam python3-setuptools python3.10
python3.10-dev python3.10-minimal sbuild-build-depends-umis-dummy zlib1g-dev
The following packages will be upgraded:
libsmartcols1 zlib1g
2 upgraded, 67 newly installed, 0 to remove and 50 not upgraded.
Need to get 34.2 MB of archives.
After this operation, 132 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-uP3TAz/apt_archive ./ sbuild-build-depends-umis-dummy 0.invalid.0 [884 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.4-1 [811 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.4.8-1 [84.1 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-4 [84.2 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.4-1 [1633 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.10.4-1 [38.6 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf media-types all 7.1.0 [33.2 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.4-1 [1625 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.4-1 [536 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.10.4-1 [21.7 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.10.4-1 [38.1 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libsmartcols1 armhf 2.38-4 [149 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38-4 [137 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.5-1 [32.9 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.10.2-1 [1362 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-2 [295 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-2 [119 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-2 [65.8 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-6 [171 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.14-1 [36.6 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-6 [510 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf cython3 armhf 0.29.28-3+rpi1 [1456 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.7 [195 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-3 [526 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.186-1 [174 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.13+dfsg-1 [593 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-6 [1214 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.7 [1070 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.9.12-1 [79.9 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.9.12-1 [146 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220403 [113 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.43.0-1 [65.3 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3 [161 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libcurl3-gnutls armhf 7.82.0-2 [313 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.10-2 [55.4 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libexpat1-dev armhf 2.4.8-1 [137 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libhtscodecs2 armhf 1.2.1-1 [52.7 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libhts3 armhf 1.13+ds-2 [339 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libjs-jquery all 3.6.0+dfsg+~3.5.13-1 [316 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libjs-underscore all 1.13.2~dfsg-2 [116 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libjs-sphinxdoc all 4.5.0-3 [142 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10 armhf 3.10.4-1 [1454 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4 [183 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-dev armhf 3.10.4-1 [2984 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libpython3-dev armhf 3.10.4-1 [22.0 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf python3.10-dev armhf 3.10.4-1 [508 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf python3-dev armhf 3.10.4-1 [25.4 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 59.6.0-1.2 [196 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf python3-pysam armhf 0.17.0+ds-2+b1 [1834 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf python3-setuptools all 59.6.0-1.2 [401 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up zlib1g:armhf (1:1.2.11.dfsg-4) ...
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Setting up libhtscodecs2:armhf (1.2.1-1) ...
Setting up media-types (7.1.0) ...
Setting up libpipeline1:armhf (1.5.5-1) ...
Setting up libpsl5:armhf (0.21.0-1.2) ...
Setting up bsdextrautils (2.38-4) ...
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.41-2) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.7) ...
Setting up libbrotli1:armhf (1.0.9-2+b2) ...
Setting up libnghttp2-14:armhf (1.43.0-1) ...
Setting up libmagic1:armhf (1:5.41-2) ...
Setting up libdeflate0:armhf (1.10-2) ...
Setting up gettext-base (0.21-6) ...
Setting up file (1:5.41-2) ...
Setting up autotools-dev (20220109.1) ...
Setting up libexpat1-dev:armhf (2.4.8-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libsigsegv2:armhf (2.14-1) ...
Setting up autopoint (0.21-6) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-4) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libmpdec3:armhf (2.5.1-2+rpi1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libssh2-1:armhf (1.10.0-3) ...
Setting up libjs-jquery (3.6.0+dfsg+~3.5.13-1) ...
Setting up libelf1:armhf (0.186-1) ...
Setting up libxml2:armhf (2.9.13+dfsg-1) ...
Setting up libjs-underscore (1.13.2~dfsg-2) ...
Setting up libfile-stripnondeterminism-perl (1.13.0-1) ...
Setting up gettext (0.21-6) ...
Setting up libtool (2.4.7-3) ...
Setting up m4 (1.4.18-5) ...
Setting up libcurl3-gnutls:armhf (7.82.0-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython3.10-stdlib:armhf (3.10.4-1) ...
Setting up libjs-sphinxdoc (4.5.0-3) ...
Setting up autoconf (2.71-2) ...
Setting up dh-strip-nondeterminism (1.13.0-1) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-8) ...
Setting up libpython3-stdlib:armhf (3.10.4-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpython3.10:armhf (3.10.4-1) ...
Setting up libhts3:armhf (1.13+ds-2) ...
Setting up python3.10 (3.10.4-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up python3 (3.10.4-1) ...
Setting up man-db (2.10.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up cython3 (0.29.28-3+rpi1) ...
Setting up libpython3.10-dev:armhf (3.10.4-1) ...
Setting up python3.10-dev (3.10.4-1) ...
Setting up python3-lib2to3 (3.9.12-1) ...
Setting up python3-pkg-resources (59.6.0-1.2) ...
Setting up python3-distutils (3.9.12-1) ...
Setting up dh-python (5.20220403) ...
Setting up python3-pysam (0.17.0+ds-2+b1) ...
Setting up libpython3-dev:armhf (3.10.4-1) ...
Setting up python3-setuptools (59.6.0-1.2) ...
Setting up debhelper (13.7) ...
Setting up python3-dev (3.10.4-1) ...
Setting up sbuild-build-depends-umis-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.33-7+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.38-3+rpi1 dpkg-dev_1.21.2+rpi1 g++-11_11.2.0-16+rpi1 gcc-11_11.2.0-16+rpi1 libc6-dev_2.33-7+rpi1 libstdc++-11-dev_11.2.0-16+rpi1 libstdc++6_11.2.0-16+rpi1 linux-libc-dev_5.16.14-1+rpi1
Package versions: adduser_3.120 apt_2.4.3 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2+rpi1 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-3+rpi1 binutils-arm-linux-gnueabihf_2.38-3+rpi1 binutils-common_2.38-3+rpi1 bsdextrautils_2.38-4 bsdutils_1:2.37.3-1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:11.2.0-2+rpi1 cpp-11_11.2.0-16+rpi1 cython3_0.29.28-3+rpi1 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.7 debianutils_5.7-0.1 dh-autoreconf_20 dh-python_5.20220403 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-3+b1 dpkg_1.21.2+rpi1 dpkg-dev_1.21.2+rpi1 dwz_0.14-1 e2fsprogs_1.46.5-2 fakeroot_1.28-1 file_1:5.41-2 findutils_4.9.0-2 g++_4:11.2.0-2+rpi1 g++-11_11.2.0-16+rpi1 gcc_4:11.2.0-2+rpi1 gcc-11_11.2.0-16+rpi1 gcc-11-base_11.2.0-16+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-6 gettext-base_0.21-6 gnupg_2.2.27-3 gnupg-l10n_2.2.27-3 gnupg-utils_2.2.27-3+b1 gpg_2.2.27-3+b1 gpg-agent_2.2.27-3+b1 gpg-wks-client_2.2.27-3+b1 gpg-wks-server_2.2.27-3+b1 gpgconf_2.2.27-3+b1 gpgsm_2.2.27-3+b1 gpgv_2.2.27-3+b1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 init-system-helpers_1.62 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.4.3 libarchive-zip-perl_1.68-1 libasan6_11.2.0-16+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-16+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libbinutils_2.38-3+rpi1 libblkid1_2.37.3-1 libbrotli1_1.0.9-2+b2 libbz2-1.0_1.0.8-5 libc-bin_2.33-7+rpi1 libc-dev-bin_2.33-7+rpi1 libc6_2.33-7+rpi1 libc6-dev_2.33-7+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-16+rpi1 libcom-err2_1.46.5-2 libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.38-3+rpi1 libctf0_2.38-3+rpi1 libcurl3-gnutls_7.82.0-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.7 libdeflate0_1.10-2 libdpkg-perl_1.21.2+rpi1 libelf1_0.186-1 libexpat1_2.4.8-1 libexpat1-dev_2.4.8-1 libext2fs2_1.46.5-2 libfakeroot_1.28-1 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-11-dev_11.2.0-16+rpi1 libgcc-s1_11.2.0-16+rpi1 libgcrypt20_1.9.4-5 libgdbm-compat4_1.23-1 libgdbm6_1.23-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.3-4 libgomp1_11.2.0-16+rpi1 libgpg-error0_1.43-3 libgssapi-krb5-2_1.19.2-2+b1 libhogweed6_3.7.3-1 libhts3_1.13+ds-2 libhtscodecs2_1.2.1-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libjs-jquery_3.6.0+dfsg+~3.5.13-1 libjs-sphinxdoc_4.5.0-3 libjs-underscore_1.13.2~dfsg-2 libk5crypto3_1.19.2-2+b1 libkeyutils1_1.6.1-3+rpi1 libkrb5-3_1.19.2-2+b1 libkrb5support0_1.19.2-2+b1 libksba8_1.6.0-2 libldap-2.5-0_2.5.11+dfsg-1+rpi1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.3-1 libmpc3_1.2.1-1 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncursesw6_6.3-2 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-11 libpam-modules-bin_1.4.0-11 libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.34_5.34.0-3 libpipeline1_1.5.5-1 libpsl5_0.21.0-1.2 libpython3-dev_3.10.4-1 libpython3-stdlib_3.10.4-1 libpython3.10_3.10.4-1 libpython3.10-dev_3.10.4-1 libpython3.10-minimal_3.10.4-1 libpython3.10-stdlib_3.10.4-1 libreadline8_8.1.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg-2+b1 libsasl2-modules-db_2.1.28+dfsg-2+b1 libseccomp2_2.5.3-2+rpi1 libselinux1_3.3-1 libsemanage-common_3.3-1 libsemanage2_3.3-1 libsepol1_3.1-1 libsepol2_3.3-1 libsigsegv2_2.14-1 libsmartcols1_2.38-4 libsqlite3-0_3.38.1-1 libss2_1.46.5-2 libssh2-1_1.10.0-3 libssl1.1_1.1.1n-1 libstdc++-11-dev_11.2.0-16+rpi1 libstdc++6_11.2.0-16+rpi1 libsub-override-perl_0.09-2 libsystemd0_250.4-1+rpi1 libtasn1-6_4.18.0-4 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.7-3 libubsan1_11.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_250.4-1+rpi1 libunistring2_1.0-1 libuuid1_2.37.3-1 libxml2_2.9.13+dfsg-1 libxxhash0_0.8.1-1 libzstd1_1.4.9+dfsg-1+rpi1 linux-libc-dev_5.16.14-1+rpi1 login_1:4.11.1+dfsg1-2 logsave_1.46.5-2 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.2-1 mawk_1.3.4.20200120-3 media-types_7.1.0 mount_2.37.3-1 ncurses-base_6.3-2 ncurses-bin_6.3-2 netbase_6.3 passwd_1:4.11.1+dfsg1-2 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.34_5.34.0-3 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 python3_3.10.4-1 python3-dev_3.10.4-1 python3-distutils_3.9.12-1 python3-lib2to3_3.9.12-1 python3-minimal_3.10.4-1 python3-pkg-resources_59.6.0-1.2 python3-pysam_0.17.0+ds-2+b1 python3-setuptools_59.6.0-1.2 python3.10_3.10.4-1 python3.10-dev_3.10.4-1 python3.10-minimal_3.10.4-1 raspbian-archive-keyring_20120528.2 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-umis-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 util-linux_2.37.3-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-4 zlib1g-dev_1:1.2.11.dfsg-4
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.WqHrhhJN/trustedkeys.kbx': General error
gpgv: Signature made Tue Oct 12 07:18:29 2021 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./umis_1.0.8-1.dsc
dpkg-source: info: extracting umis in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking umis_1.0.8.orig.tar.gz
dpkg-source: info: unpacking umis_1.0.8-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_bashism.patch
Check disc space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 1.0.8-1+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-745e125a-4c7c-441a-98dd-c34f3a79fd42
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package umis
dpkg-buildpackage: info: source version 1.0.8-1+b1
dpkg-buildpackage: info: source distribution bookworm-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_clean
I: pybuild base:239: python3.10 setup.py clean
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
running clean
removing '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.10' does not exist -- can't clean it
rm -rf umis.egg-info
rm -f umis/utils.c
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=pybuild
dh_update_autotools_config -a -O--buildsystem=pybuild
dh_autoreconf -a -O--buildsystem=pybuild
dh_auto_configure -a -O--buildsystem=pybuild
I: pybuild base:239: python3.10 setup.py config
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
running config
dh_auto_build -a -O--buildsystem=pybuild
I: pybuild base:239: /usr/bin/python3 setup.py build
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
running build
running build_py
creating /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis
copying umis/__init__.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis
copying umis/barcodes.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis
copying umis/umis.py -> /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis
running build_ext
cythoning umis/utils.pyx to umis/utils.c
/usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /<<PKGBUILDDIR>>/umis/utils.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'utils' extension
creating build
creating build/temp.linux-armhf-3.10
creating build/temp.linux-armhf-3.10/umis
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.10 -c umis/utils.c -o build/temp.linux-armhf-3.10/umis/utils.o
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.10/umis/utils.o -o /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/utils.cpython-310-arm-linux-gnueabihf.so
dh_auto_test -a -O--buildsystem=pybuild
I: pybuild base:239: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build; python3.10 -m unittest discover -v
----------------------------------------------------------------------
Ran 0 tests in 0.000s
OK
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=pybuild
dh_prep -a -O--buildsystem=pybuild
dh_auto_install -a -O--buildsystem=pybuild
I: pybuild base:239: /usr/bin/python3 setup.py install --root /<<PKGBUILDDIR>>/debian/python3-umis
/usr/lib/python3/dist-packages/setuptools/dist.py:723: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
running build_ext
skipping 'umis/utils.c' Cython extension (up-to-date)
running install_lib
creating /<<PKGBUILDDIR>>/debian/python3-umis
creating /<<PKGBUILDDIR>>/debian/python3-umis/usr
creating /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib
creating /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10
creating /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages
creating /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis/__init__.py -> /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis/barcodes.py -> /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis/umis.py -> /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis
creating /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/umis/__pycache__/__init__.cpython-310.pyc -> /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis/__pycache__
copying /<<PKGBUILDDIR>>/.pybuild/cpython3_3.10_umis/build/utils.cpython-310-arm-linux-gnueabihf.so -> /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages
byte-compiling /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis/__init__.py to __init__.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis/barcodes.py to barcodes.cpython-310.pyc
byte-compiling /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis/umis.py to umis.cpython-310.pyc
running install_egg_info
running egg_info
creating umis.egg-info
writing umis.egg-info/PKG-INFO
writing dependency_links to umis.egg-info/dependency_links.txt
writing entry points to umis.egg-info/entry_points.txt
writing requirements to umis.egg-info/requires.txt
writing top-level names to umis.egg-info/top_level.txt
writing manifest file 'umis.egg-info/SOURCES.txt'
reading manifest file 'umis.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.md'
writing manifest file 'umis.egg-info/SOURCES.txt'
Copying umis.egg-info to /<<PKGBUILDDIR>>/debian/python3-umis/usr/lib/python3.10/dist-packages/umis-1.0.8.egg-info
Skipping SOURCES.txt
running install_scripts
Installing umis script to /<<PKGBUILDDIR>>/debian/python3-umis/usr/bin
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
mkdir -p debian/umis
mv debian/python3-umis/usr debian/umis
rmdir debian/python3-umis
find debian -type d -name __pycache__ | xargs rm -rf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a -O--buildsystem=pybuild
dh_installchangelogs -a -O--buildsystem=pybuild
dh_installman -a -O--buildsystem=pybuild
dh_python3 -a -O--buildsystem=pybuild
dh_installsystemduser -a -O--buildsystem=pybuild
dh_perl -a -O--buildsystem=pybuild
dh_link -a -O--buildsystem=pybuild
dh_strip_nondeterminism -a -O--buildsystem=pybuild
dh_compress -a -O--buildsystem=pybuild
dh_fixperms -a -O--buildsystem=pybuild
dh_missing -a -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
dh_strip -a -O--buildsystem=pybuild
dh_makeshlibs -a -O--buildsystem=pybuild
dh_shlibdeps -a -O--buildsystem=pybuild
dh_installdeb -a -O--buildsystem=pybuild
dh_gencontrol -a -O--buildsystem=pybuild
dpkg-gencontrol: warning: package umis: substitution variable ${python3:Versions} unused, but is defined
dpkg-gencontrol: warning: package umis: substitution variable ${python3:Versions} unused, but is defined
dh_md5sums -a -O--buildsystem=pybuild
dh_builddeb -a -O--buildsystem=pybuild
dpkg-deb: building package 'umis-dbgsym' in '../umis-dbgsym_1.0.8-1+b1_armhf.deb'.
dpkg-deb: building package 'umis' in '../umis_1.0.8-1+b1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../umis_1.0.8-1+b1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../umis_1.0.8-1+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2022-04-21T20:44:20Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
umis_1.0.8-1+b1_armhf.changes:
------------------------------
Format: 1.8
Date: Tue, 12 Oct 2021 09:04:50 +0200
Source: umis (1.0.8-1)
Binary: umis umis-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 1.0.8-1+b1
Distribution: bookworm-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
umis - tools for processing UMI RNA-tag data
Changes:
umis (1.0.8-1+b1) bookworm-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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ea6cf019974e2a372534ab8145218f80f5a239c1 6639 umis_1.0.8-1+b1_armhf.buildinfo
993d05238f9935f7cb6759aa6d65bca8e170eb42 25172 umis_1.0.8-1+b1_armhf.deb
Checksums-Sha256:
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a51cddc4cc507f8944fd8e8580cbb8ea72e00a3d732968b71b96f329f5ed62b5 6639 umis_1.0.8-1+b1_armhf.buildinfo
b8b9a4bf6b1f8bac1d7092d1cfce2001119fe3706e6bddb6e171d14e9fd66248 25172 umis_1.0.8-1+b1_armhf.deb
Files:
5324853e7d9de32702de489856e82e50 27736 debug optional umis-dbgsym_1.0.8-1+b1_armhf.deb
b9c51ed0b516b59338f040f9565b54e3 6639 science optional umis_1.0.8-1+b1_armhf.buildinfo
d5a93ab0763aac04ec171c9e3c2ba156 25172 science optional umis_1.0.8-1+b1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
umis-dbgsym_1.0.8-1+b1_armhf.deb
--------------------------------
new Debian package, version 2.0.
size 27736 bytes: control archive=536 bytes.
373 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: umis-dbgsym
Source: umis (1.0.8-1)
Version: 1.0.8-1+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 42
Depends: umis (= 1.0.8-1+b1)
Section: debug
Priority: optional
Description: debug symbols for umis
Build-Ids: 0a75da601ec7331e07149d78a031531a763df394
drwxr-xr-x root/root 0 2021-10-12 07:04 ./
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/debug/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/debug/.build-id/0a/
-rw-r--r-- root/root 32064 2021-10-12 07:04 ./usr/lib/debug/.build-id/0a/75da601ec7331e07149d78a031531a763df394.debug
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/doc/
lrwxrwxrwx root/root 0 2021-10-12 07:04 ./usr/share/doc/umis-dbgsym -> umis
umis_1.0.8-1+b1_armhf.deb
-------------------------
new Debian package, version 2.0.
size 25172 bytes: control archive=1640 bytes.
854 bytes, 22 lines control
1294 bytes, 16 lines md5sums
255 bytes, 12 lines * postinst #!/bin/sh
399 bytes, 12 lines * prerm #!/bin/sh
Package: umis
Source: umis (1.0.8-1)
Version: 1.0.8-1+b1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 108
Depends: libc6 (>= 2.4), python3 (<< 3.11), python3 (>= 3.10~), python3-click, python3-pandas, python3-pysam, python3-regex, python3-scipy, python3-toolz, python3:any
Suggests: umis-examples
Section: science
Priority: optional
Homepage: https://github.com/vals/umis
Description: tools for processing UMI RNA-tag data
Umis provides tools for estimating expression in RNA-Seq data which
performs sequencing of end tags of transcript, and incorporate molecular
tags to correct for amplification bias.
.
There are four steps in this process.
.
1. Formatting reads
2. Filtering noisy cellular barcodes
3. Pseudo-mapping to cDNAs
4. Counting molecular identifiers
drwxr-xr-x root/root 0 2021-10-12 07:04 ./
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/bin/
-rwxr-xr-x root/root 943 2021-10-12 07:04 ./usr/bin/umis
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/python3/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis-1.0.8.egg-info/
-rw-r--r-- root/root 3962 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis-1.0.8.egg-info/PKG-INFO
-rw-r--r-- root/root 1 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis-1.0.8.egg-info/dependency_links.txt
-rw-r--r-- root/root 41 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis-1.0.8.egg-info/entry_points.txt
-rw-r--r-- root/root 0 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis-1.0.8.egg-info/requires.txt
-rw-r--r-- root/root 11 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis-1.0.8.egg-info/top_level.txt
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/lib/python3/dist-packages/umis/
-rw-r--r-- root/root 19 2021-09-27 13:53 ./usr/lib/python3/dist-packages/umis/__init__.py
-rw-r--r-- root/root 6652 2021-09-27 13:53 ./usr/lib/python3/dist-packages/umis/barcodes.py
-rw-r--r-- root/root 50915 2021-09-27 13:53 ./usr/lib/python3/dist-packages/umis/umis.py
-rw-r--r-- root/root 17992 2021-10-12 07:04 ./usr/lib/python3/dist-packages/utils.cpython-310-arm-linux-gnueabihf.so
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/doc/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/doc/umis/
-rw-r--r-- root/root 326 2021-10-12 07:04 ./usr/share/doc/umis/README.test
-rw-r--r-- root/root 220 2021-10-12 07:04 ./usr/share/doc/umis/changelog.Debian.armhf.gz
-rw-r--r-- root/root 615 2021-10-12 07:04 ./usr/share/doc/umis/changelog.Debian.gz
-rw-r--r-- root/root 1666 2021-09-27 13:53 ./usr/share/doc/umis/changelog.gz
-rw-r--r-- root/root 1325 2021-10-12 07:04 ./usr/share/doc/umis/copyright
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/man/
drwxr-xr-x root/root 0 2021-10-12 07:04 ./usr/share/man/man1/
-rw-r--r-- root/root 740 2021-10-12 07:04 ./usr/share/man/man1/umis.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 2268
Build-Time: 63
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 568
Job: umis_1.0.8-1
Machine Architecture: armhf
Package: umis
Package-Time: 687
Source-Version: 1.0.8-1
Space: 2268
Status: successful
Version: 1.0.8-1+b1
--------------------------------------------------------------------------------
Finished at 2022-04-21T20:44:20Z
Build needed 00:11:27, 2268k disc space