trf →
4.09.1-5 →
armhf → 2021-10-12 07:16:08
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testbuildd
+==============================================================================+
| trf 4.09.1-5 (armhf) Tue, 12 Oct 2021 07:09:24 +0000 |
+==============================================================================+
Package: trf
Version: 4.09.1-5
Source Version: 4.09.1-5
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-4bae47eb-abcc-4fe9-ad87-d743c71d1a85' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bookworm-staging/main Sources [12.4 MB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf Packages [13.4 MB]
Fetched 25.8 MB in 29s (889 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'trf' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/trf.git
Please use:
git clone https://salsa.debian.org/med-team/trf.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 292 kB of source archives.
Get:1 http://172.17.0.1/private bookworm-staging/main trf 4.09.1-5 (dsc) [2014 B]
Get:2 http://172.17.0.1/private bookworm-staging/main trf 4.09.1-5 (tar) [274 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main trf 4.09.1-5 (diff) [15.7 kB]
Fetched 292 kB in 1s (501 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/trf-t9OldC/trf-4.09.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/trf-t9OldC' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-lWZdau/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-lWZdau/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-lWZdau/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (2801 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 22 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (13.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12484 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any all)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13)
Filtered Build-Depends: debhelper-compat (= 13)
dpkg-deb: building package 'sbuild-build-depends-trf-dummy' in '/<<BUILDDIR>>/resolver-lWZdau/apt_archive/sbuild-build-depends-trf-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-trf-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Sources [484 B]
Get:5 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ Packages [567 B]
Fetched 2384 B in 1s (3236 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install trf build dependencies (apt-based resolver)
---------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1
libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2
m4 man-db po-debconf sensible-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc dh-make gettext-doc
libasprintf-dev libgettextpo-dev groff libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libdebhelper-perl libelf1
libfile-stripnondeterminism-perl libicu67 libmagic-mgc libmagic1
libpipeline1 libsigsegv2 libsub-override-perl libtool libuchardet0 libxml2
m4 man-db po-debconf sbuild-build-depends-trf-dummy sensible-utils
0 upgraded, 32 newly installed, 0 to remove and 22 not upgraded.
Need to get 17.5 MB of archives.
After this operation, 64.7 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-lWZdau/apt_archive ./ sbuild-build-depends-trf-dummy 0.invalid.0 [852 B]
Get:2 http://172.17.0.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.2-1 [135 kB]
Get:3 http://172.17.0.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:4 http://172.17.0.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-7 [793 kB]
Get:5 http://172.17.0.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:6 http://172.17.0.1/private bookworm-staging/main armhf man-db armhf 2.9.4-2 [1307 kB]
Get:7 http://172.17.0.1/private bookworm-staging/main armhf sensible-utils all 0.0.17 [21.5 kB]
Get:8 http://172.17.0.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:9 http://172.17.0.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:10 http://172.17.0.1/private bookworm-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:11 http://172.17.0.1/private bookworm-staging/main armhf gettext-base armhf 0.21-4 [171 kB]
Get:12 http://172.17.0.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.13-1 [34.3 kB]
Get:13 http://172.17.0.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:14 http://172.17.0.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:15 http://172.17.0.1/private bookworm-staging/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get:16 http://172.17.0.1/private bookworm-staging/main armhf automake all 1:1.16.4-2 [819 kB]
Get:17 http://172.17.0.1/private bookworm-staging/main armhf autopoint all 0.21-4 [510 kB]
Get:18 http://172.17.0.1/private bookworm-staging/main armhf libdebhelper-perl all 13.5.2 [192 kB]
Get:19 http://172.17.0.1/private bookworm-staging/main armhf libtool all 2.4.6-15 [513 kB]
Get:20 http://172.17.0.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:21 http://172.17.0.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:22 http://172.17.0.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:23 http://172.17.0.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get:24 http://172.17.0.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get:25 http://172.17.0.1/private bookworm-staging/main armhf libelf1 armhf 0.185-2 [168 kB]
Get:26 http://172.17.0.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:27 http://172.17.0.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:28 http://172.17.0.1/private bookworm-staging/main armhf libxml2 armhf 2.9.12+dfsg-5 [584 kB]
Get:29 http://172.17.0.1/private bookworm-staging/main armhf gettext armhf 0.21-4 [1215 kB]
Get:30 http://172.17.0.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:31 http://172.17.0.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:32 http://172.17.0.1/private bookworm-staging/main armhf debhelper all 13.5.2 [1056 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 17.5 MB in 7s (2532 kB/s)
Selecting previously unselected package bsdextrautils.
(Reading database ... 12484 files and directories currently installed.)
Preparing to unpack .../00-bsdextrautils_2.37.2-1_armhf.deb ...
Unpacking bsdextrautils (2.37.2-1) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ...
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Unpacking groff-base (1.22.4-7) ...
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Preparing to unpack .../07-libmagic1_1%3a5.39-3_armhf.deb ...
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Unpacking gettext-base (0.21-4) ...
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Unpacking libsigsegv2:armhf (2.13-1) ...
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Unpacking sbuild-build-depends-trf-dummy (0.invalid.0) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up bsdextrautils (2.37.2-1) ...
update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode
Setting up libicu67:armhf (67.1-7) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.5.2) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up gettext-base (0.21-4) ...
Setting up file (1:5.39-3) ...
Setting up autotools-dev (20180224.1+nmu1) ...
Setting up libsigsegv2:armhf (2.13-1) ...
Setting up autopoint (0.21-4) ...
Setting up sensible-utils (0.0.17) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libelf1:armhf (0.185-2) ...
Setting up libxml2:armhf (2.9.12+dfsg-5) ...
Setting up libfile-stripnondeterminism-perl (1.12.0-1) ...
Setting up gettext (0.21-4) ...
Setting up libtool (2.4.6-15) ...
Setting up m4 (1.4.18-5) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up autoconf (2.71-2) ...
Setting up dh-strip-nondeterminism (1.12.0-1) ...
Setting up dwz (0.14-1) ...
Setting up groff-base (1.22.4-7) ...
Setting up automake (1:1.16.4-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dh-autoreconf (20) ...
Setting up debhelper (13.5.2) ...
Setting up sbuild-build-depends-trf-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.32-4+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.37-5+rpi1 dpkg-dev_1.20.9+rpi1 g++-10_10.3.0-9+rpi1 gcc-10_10.3.0-9+rpi1 libc6-dev_2.32-4+rpi1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 linux-libc-dev_5.10.46-4+rpi1
Package versions: adduser_3.118 apt_2.3.9 autoconf_2.71-2 automake_1:1.16.4-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12+rpi1 base-passwd_3.5.51 bash_5.1-3 binutils_2.37-5+rpi1 binutils-arm-linux-gnueabihf_2.37-5+rpi1 binutils-common_2.37-5+rpi1 bsdextrautils_2.37.2-1 bsdutils_1:2.37.2-1 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1+rpi1 cpp-10_10.3.0-9+rpi1 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.5.2 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-2 dpkg_1.20.9+rpi1 dpkg-dev_1.20.9+rpi1 dwz_0.14-1 e2fsprogs_1.46.4-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1+rpi1 g++-10_10.3.0-9+rpi1 gcc_4:10.2.1-1+rpi1 gcc-10_10.3.0-9+rpi1 gcc-10-base_10.3.0-9+rpi1 gcc-11-base_11.2.0-4+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-4 gettext-base_0.21-4 gnupg_2.2.27-2 gnupg-l10n_2.2.27-2 gnupg-utils_2.2.27-2 gpg_2.2.27-2 gpg-agent_2.2.27-2 gpg-wks-client_2.2.27-2 gpg-wks-server_2.2.27-2 gpgconf_2.2.27-2 gpgsm_2.2.27-2 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.3.9 libarchive-zip-perl_1.68-1 libasan6_11.2.0-4+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-4+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.5-1 libaudit1_1:3.0.5-1 libbinutils_2.37-5+rpi1 libblkid1_2.37.2-1 libbz2-1.0_1.0.8-4 libc-bin_2.32-4+rpi1 libc-dev-bin_2.32-4+rpi1 libc6_2.32-4+rpi1 libc6-dev_2.32-4+rpi1 libcap-ng0_0.7.9-2.2+b1 libcc1-0_11.2.0-4+rpi1 libcom-err2_1.46.4-1 libcrypt-dev_1:4.4.25-2 libcrypt1_1:4.4.25-2 libctf-nobfd0_2.37-5+rpi1 libctf0_2.37-5+rpi1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.5.2 libdpkg-perl_1.20.9+rpi1 libelf1_0.185-2 libext2fs2_1.46.4-1 libfakeroot_1.25.3-1.1 libffi7_3.3-6 libfile-stripnondeterminism-perl_1.12.0-1 libgcc-10-dev_10.3.0-9+rpi1 libgcc-s1_11.2.0-4+rpi1 libgcrypt20_1.9.4-3 libgdbm-compat4_1.21-1 libgdbm6_1.21-1 libgmp10_2:6.2.1+dfsg-2 libgnutls30_3.7.2-2 libgomp1_11.2.0-4+rpi1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.23-1 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 libksba8_1.6.0-2 libldap-2.4-2_2.4.59+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.37.2-1 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncursesw6_6.2+20201114-4 libnettle8_3.7.3-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-2 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.32_5.32.1-5 libpipeline1_1.5.3-1 libreadline8_8.1-2 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1+rpi1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.37.2-1 libsqlite3-0_3.36.0-2 libss2_1.46.4-1 libssl1.1_1.1.1l-1 libstdc++-10-dev_10.3.0-9+rpi1 libstdc++6_11.2.0-4+rpi1 libsub-override-perl_0.09-2 libsystemd0_247.9-1+rpi1 libtasn1-6_4.17.0-2 libtext-charwidth-perl_0.04-10+b1 libtext-iconv-perl_1.7-7+b1 libtinfo6_6.2+20201114-4 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libubsan1_11.2.0-4+rpi1 libuchardet0_0.0.7-1 libudev1_247.9-1+rpi1 libunistring2_0.9.10-6 libuuid1_2.37.2-1 libxml2_2.9.12+dfsg-5 libxxhash0_0.8.0-2+rpi1 libzstd1_1.4.8+dfsg-2.1+rpi1 linux-libc-dev_5.10.46-4+rpi1 login_1:4.8.1-1 logsave_1.46.4-1 lsb-base_11.1.0+rpi1 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.37.2-1 ncurses-base_6.2+20201114-4 ncurses-bin_6.2+20201114-4 netbase_6.3 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-5 perl-base_5.32.1-5 perl-modules-5.32_5.32.1-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 raspbian-archive-keyring_20120528.2 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-trf-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021a-1 util-linux_2.37.2-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.xdLV0NBV/trustedkeys.kbx': General error
gpgv: Signature made Sun Oct 10 09:18:53 2021 UTC
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./trf_4.09.1-5.dsc
dpkg-source: info: extracting trf in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking trf_4.09.1.orig.tar.gz
dpkg-source: info: unpacking trf_4.09.1-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix-exit-code.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-4bae47eb-abcc-4fe9-ad87-d743c71d1a85
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package trf
dpkg-buildpackage: info: source version 4.09.1-5
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking target system type... arm-unknown-linux-gnueabihf
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for ranlib... ranlib
checking whether ln -s works... yes
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for limits.h... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for size_t... yes
checking for GNU libc compatible malloc... yes
checking for GNU libc compatible realloc... yes
checking for library containing floor... -lm
checking for sqrt... yes
checking for memset... yes
checking for strchr... yes
checking for strerror... yes
checking for strstr... yes
checking for strtol... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating config.h
config.status: executing depfiles commands
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make all-recursive
make[2]: Entering directory '/<<PKGBUILDDIR>>'
Making all in src
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -fno-align-functions -fno-align-loops -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o trf-trf.o `test -f 'trf.c' || echo './'`trf.c
In file included from trfrun.h:89,
from trf.c:30:
tr30dat.h:49:9: note: '#pragma message: You forgot to define a platform when compiling. Setting UNIXCONSOLE.'
49 | #pragma message( \
| ^~~~~~~
In file included from trfrun.h:91,
from trf.c:30:
trfclean.h: In function 'GetList':
trfclean.h:166:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
166 | fgets( hsequence, 255, fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
trfclean.h:170:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
170 | fgets( hparameters, 255, fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trfclean.h: In function 'CleanAlignments':
trfclean.h:484:13: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
484 | fgets( string2, 260, al_fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
trfclean.h:485:13: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
485 | fgets( string3, 260, al_fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
trfclean.h:502:13: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
502 | fgets( string2, 260, al_fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
trfclean.h: In function 'BreakAlignments':
trfclean.h:568:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
568 | fgets( headlns[i], 200, al_fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
trfclean.h:593:13: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
593 | fgets( buffer, 200, al_fp );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h: In function 'TRF':
trfrun.h:696:30: warning: '%s' directive writing up to 259 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
696 | sprintf( htmlstring, "%s.%s.html", paramset.outputprefix, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output between 7 and 525 bytes into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:697:29: warning: '%s' directive writing up to 259 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
697 | sprintf( txtstring, "%s.%s.txt.html", paramset.outputprefix, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output between 11 and 529 bytes into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:698:29: warning: '%s' directive writing up to 259 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
698 | sprintf( datstring, "%s.%s.dat", paramset.outputprefix, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output between 6 and 524 bytes into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:699:30: warning: '%s' directive writing up to 259 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
699 | sprintf( maskstring, "%s.%s.mask", paramset.outputprefix, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output between 7 and 525 bytes into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h: In function 'TRFControlRoutine':
trfrun.h:323:27: warning: '.summary.html' directive writing 13 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
323 | sprintf( desth, "%s.%s.summary.html", prefix, paramstring );
| ^~~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 15 or more bytes (assuming 274) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:335:31: warning: '.mask' directive writing 5 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
335 | sprintf( destm, "%s.%s.mask", prefix, paramstring );
| ^~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 7 or more bytes (assuming 266) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:348:35: warning: '.dat' directive writing 4 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
348 | sprintf( destd, "%s.%s.dat", prefix, paramstring );
| ^~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 6 or more bytes (assuming 265) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:499:32: warning: '%s' directive writing up to 259 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
499 | sprintf( outh, "%s.%s.1.html", input, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output between 9 and 527 bytes into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:520:42: warning: '%s' directive writing up to 259 bytes into a region of size between 247 and 256 [-Wformat-overflow=]
520 | sprintf( maskstring, "%s.s%d.%s.mask", prefix, i, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 10 or more bytes (assuming 278) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:528:36: warning: '%s' directive writing up to 259 bytes into a region of size between 247 and 256 [-Wformat-overflow=]
528 | sprintf( outm, "%s.s%d.%s.mask", prefix, i, paramstring );
| ^~ ~~~~~~~~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 10 or more bytes (assuming 278) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:196:39: warning: '.dat' directive writing 4 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
196 | sprintf( destd, "%s.%s.dat", prefix, paramstring );
| ^~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 6 or more bytes (assuming 265) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from trf.c:30:
trfrun.h:288:33: warning: '.mask' directive writing 5 bytes into a region of size between 0 and 259 [-Wformat-overflow=]
288 | maskstring, "%s.%s.mask", paramset.outputprefix, paramstring );
| ^~~~~
In file included from /usr/include/stdio.h:866,
from trf.c:26:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:38:10: note: '__builtin___sprintf_chk' output 7 or more bytes (assuming 266) into a destination of size 260
38 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
39 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -fno-align-functions -fno-align-loops -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o trf trf-trf.o -lm
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
make -j4 check VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making check in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[2]: Nothing to be done for 'check'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making install in src
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
make[3]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/bin'
/usr/bin/install -c trf '/<<PKGBUILDDIR>>/debian/tmp/usr/bin'
make install-exec-hook
make[4]: Entering directory '/<<PKGBUILDDIR>>/src'
ln -s /<<PKGBUILDDIR>>/debian/tmp/usr/bin/trf \
/<<PKGBUILDDIR>>/debian/tmp/usr/bin/trf4.10.0-rc.2.linux.exe
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/share/doc/trf'
/usr/bin/install -c -m 644 README.md '/<<PKGBUILDDIR>>/debian/tmp/usr/share/doc/trf'
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
find debian -name "*.exe" -delete
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/trf/usr/bin/trf was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'trf' in '../trf_4.09.1-5_armhf.deb'.
dpkg-deb: building package 'trf-dbgsym' in '../trf-dbgsym_4.09.1-5_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../trf_4.09.1-5_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2021-10-12T07:15:58Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
trf_4.09.1-5_armhf.changes:
---------------------------
Format: 1.8
Date: Sun, 10 Oct 2021 11:15:03 +0200
Source: trf
Binary: trf trf-dbgsym
Architecture: armhf
Version: 4.09.1-5
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Description:
trf - locate and display tandem repeats in DNA sequences
Changes:
trf (4.09.1-5) unstable; urgency=medium
.
* Team upload.
* Fix watchfile to detect new versions on github
* Standards-Version: 4.6.0 (routine-update)
* Apply multi-arch hints.
+ trf-examples: Add Multi-Arch: foreign.
Checksums-Sha1:
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b304e3b8816e22de2cd76b3ecf9b7d1e9ee4b65a 4803 trf_4.09.1-5_armhf.buildinfo
8ed47d686810f79d73977af99d8f6d7aaec0c8d3 50168 trf_4.09.1-5_armhf.deb
Checksums-Sha256:
3a1601fab88980cac7dabc67f147dba139ad39be6a34f15ddaed2188e1e30349 76472 trf-dbgsym_4.09.1-5_armhf.deb
297f66dc6ec224de08752d0c6bc4aeb0f4293e6a16c65e4da73e28d13542cc07 4803 trf_4.09.1-5_armhf.buildinfo
2300b6af231bdd37e15ca65e8dce150e3db54e542f77c358aeae1dfac6469d5d 50168 trf_4.09.1-5_armhf.deb
Files:
c6f29e04d88ea9ae2130aa64b96c13b9 76472 debug optional trf-dbgsym_4.09.1-5_armhf.deb
94c4d23c3a11c5d4551abc5030e0bddd 4803 science optional trf_4.09.1-5_armhf.buildinfo
efa80fab79a5e4759d4c6025e28a2631 50168 science optional trf_4.09.1-5_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
trf-dbgsym_4.09.1-5_armhf.deb
-----------------------------
new Debian package, version 2.0.
size 76472 bytes: control archive=532 bytes.
355 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: trf-dbgsym
Source: trf
Version: 4.09.1-5
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 93
Depends: trf (= 4.09.1-5)
Section: debug
Priority: optional
Description: debug symbols for trf
Build-Ids: 2117f2106e370cbb7ab4cb15ec26f3829b4e329b
drwxr-xr-x root/root 0 2021-10-10 09:15 ./
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/lib/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/lib/debug/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/lib/debug/.build-id/21/
-rw-r--r-- root/root 84640 2021-10-10 09:15 ./usr/lib/debug/.build-id/21/17f2106e370cbb7ab4cb15ec26f3829b4e329b.debug
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/doc/
lrwxrwxrwx root/root 0 2021-10-10 09:15 ./usr/share/doc/trf-dbgsym -> trf
trf_4.09.1-5_armhf.deb
----------------------
new Debian package, version 2.0.
size 50168 bytes: control archive=1172 bytes.
1291 bytes, 24 lines control
369 bytes, 6 lines md5sums
Package: trf
Version: 4.09.1-5
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 150
Depends: libc6 (>= 2.29)
Section: science
Priority: optional
Homepage: https://tandem.bu.edu/trf/trf.html
Description: locate and display tandem repeats in DNA sequences
A tandem repeat in DNA is two or more adjacent, approximate copies of a
pattern of nucleotides. Tandem Repeats Finder is a program to locate and
display tandem repeats in DNA sequences. In order to use the program,
the user submits a sequence in FASTA format. There is no need to specify
the pattern, the size of the pattern or any other parameter. The output
consists of two files: a repeat table file and an alignment file. The
repeat table, viewable in a web browser, contains information about each
repeat, including its location, size, number of copies and nucleotide
content. Clicking on the location indices for one of the table entries
opens a second browser page that shows an alignment of the copies
against a consensus pattern. The program is very fast, analyzing
sequences on the order of .5Mb in just a few seconds. Submitted
sequences may be of arbitrary length. Repeats with pattern size in the
range from 1 to 2000 bases are detected.
drwxr-xr-x root/root 0 2021-10-10 09:15 ./
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/bin/
-rwxr-xr-x root/root 100060 2021-10-10 09:15 ./usr/bin/trf
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/doc/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/doc/trf/
-rw-r--r-- root/root 163 2021-10-10 09:15 ./usr/share/doc/trf/README.md
-rw-r--r-- root/root 581 2021-10-10 09:15 ./usr/share/doc/trf/changelog.Debian.gz
-rw-r--r-- root/root 4799 2020-06-20 03:45 ./usr/share/doc/trf/changelog.gz
-rw-r--r-- root/root 35686 2021-10-10 09:14 ./usr/share/doc/trf/copyright
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/man/
drwxr-xr-x root/root 0 2021-10-10 09:15 ./usr/share/man/man1/
-rw-r--r-- root/root 1006 2021-10-10 09:15 ./usr/share/man/man1/trf.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 23016
Build-Time: 87
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 253
Job: trf_4.09.1-5
Machine Architecture: armhf
Package: trf
Package-Time: 394
Source-Version: 4.09.1-5
Space: 23016
Status: successful
Version: 4.09.1-5
--------------------------------------------------------------------------------
Finished at 2021-10-12T07:15:58Z
Build needed 00:06:34, 23016k disc space