transrate-tools →
1.0.0-1 →
armhf → 2015-10-12 07:33:03
sbuild (Debian sbuild) 0.65.2 (24 Mar 2015) on testbuildd.raspbian.org
╔══════════════════════════════════════════════════════════════════════════════╗
║ transrate-tools 1.0.0-1 (armhf) 12 Oct 2015 07:24 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: transrate-tools
Version: 1.0.0-1
Source Version: 1.0.0-1
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/transrate-tools-wS8obj/transrate-tools-1.0.0' with '«PKGBUILDDIR»'
I: NOTICE: Log filtering will replace 'build/transrate-tools-wS8obj' with '«BUILDDIR»'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-f324528f-c9e1-4460-9ba3-371e438bd985' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
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Get:1 http://172.17.0.1 stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1 stretch-staging/main Sources [8354 kB]
Get:3 http://172.17.0.1 stretch-staging/main armhf Packages [10.2 MB]
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NOTICE: 'transrate-tools' packaging is maintained in the 'Git' version control system at:
git://anonscm.debian.org/debian-med/transrate-tools.git
Need to get 11.5 kB of source archives.
Get:1 http://172.17.0.1/private/ stretch-staging/main transrate-tools 1.0.0-1 (dsc) [2042 B]
Get:2 http://172.17.0.1/private/ stretch-staging/main transrate-tools 1.0.0-1 (tar) [6167 B]
Get:3 http://172.17.0.1/private/ stretch-staging/main transrate-tools 1.0.0-1 (diff) [3292 B]
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Merged Build-Depends: build-essential, fakeroot
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dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/«BUILDDIR»/resolver-PtHbVZ/apt_archive/sbuild-build-depends-core-dummy.deb'.
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install core build dependencies (apt-based resolver) │
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The following NEW packages will be installed:
sbuild-build-depends-core-dummy
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Merged Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), cmake, libbamtools-dev (>= 2.4+dfsg-1~), zlib1g-dev, help2man
Filtered Build-Depends: libc6-dev, gcc (>= 4:4.9.1), g++ (>= 4:4.9.1), make, dpkg-dev (>= 1.17.11), debhelper (>= 9), cmake, libbamtools-dev (>= 2.4+dfsg-1~), zlib1g-dev, help2man
dpkg-deb: building package 'sbuild-build-depends-transrate-tools-dummy' in '/«BUILDDIR»/resolver-Kq6p5t/apt_archive/sbuild-build-depends-transrate-tools-dummy.deb'.
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┌──────────────────────────────────────────────────────────────────────────────┐
│ Install transrate-tools build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
Installing build dependencies
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Building dependency tree...
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The following extra packages will be installed:
bsdmainutils cmake cmake-data debhelper dh-strip-nondeterminism file gettext
gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libarchive13 libbamtools-dev libbamtools2.4.0 libcroco3 libcurl3 libexpat1
libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls-deb0-28
libgssapi-krb5-2 libhogweed4 libicu55 libidn11 libjsoncpp0v5 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1
libnettle6 libp11-kit0 libpipeline1 librtmp1 libsasl2-2 libsasl2-modules-db
libssh2-1 libssl1.0.0 libtasn1-6 libtimedate-perl libunistring0 libxml2
man-db po-debconf zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation codeblocks eclipse ninja-build dh-make
gettext-doc autopoint libasprintf-dev libgettextpo-dev groff lrzip
gnutls-bin krb5-doc krb5-user less www-browser libmail-box-perl
Recommended packages:
curl wget lynx-cur ca-certificates libglib2.0-data shared-mime-info
xdg-user-dirs krb5-locales libsasl2-modules xml-core libmail-sendmail-perl
The following NEW packages will be installed:
bsdmainutils cmake cmake-data debhelper dh-strip-nondeterminism file gettext
gettext-base groff-base help2man intltool-debian libarchive-zip-perl
libarchive13 libbamtools-dev libbamtools2.4.0 libcroco3 libcurl3 libexpat1
libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libgnutls-deb0-28
libgssapi-krb5-2 libhogweed4 libicu55 libidn11 libjsoncpp0v5 libk5crypto3
libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblzo2-2 libmagic1
libnettle6 libp11-kit0 libpipeline1 librtmp1 libsasl2-2 libsasl2-modules-db
libssh2-1 libssl1.0.0 libtasn1-6 libtimedate-perl libunistring0 libxml2
man-db po-debconf sbuild-build-depends-transrate-tools-dummy zlib1g-dev
0 upgraded, 50 newly installed, 0 to remove and 46 not upgraded.
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Get:39 http://172.17.0.1/private/ stretch-staging/main intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:40 http://172.17.0.1/private/ stretch-staging/main po-debconf all 1.0.18 [248 kB]
Get:41 http://172.17.0.1/private/ stretch-staging/main libarchive-zip-perl all 1.53-1 [97.3 kB]
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Get:43 http://172.17.0.1/private/ stretch-staging/main libtimedate-perl all 2.3000-2 [42.2 kB]
Get:44 http://172.17.0.1/private/ stretch-staging/main dh-strip-nondeterminism all 0.012-1 [7282 B]
Get:45 http://172.17.0.1/private/ stretch-staging/main debhelper all 9.20151005 [817 kB]
Get:46 http://172.17.0.1/private/ stretch-staging/main help2man armhf 1.47.2 [154 kB]
Get:47 http://172.17.0.1/private/ stretch-staging/main libbamtools2.4.0 armhf 2.4.0+dfsg-2 [157 kB]
Get:48 http://172.17.0.1/private/ stretch-staging/main libbamtools-dev armhf 2.4.0+dfsg-2 [352 kB]
Get:49 http://172.17.0.1/private/ stretch-staging/main zlib1g-dev armhf 1:1.2.8.dfsg-2+b1 [197 kB]
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Preparing to unpack .../zlib1g-dev_1%3a1.2.8.dfsg-2+b1_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Selecting previously unselected package sbuild-build-depends-transrate-tools-dummy.
Preparing to unpack .../sbuild-build-depends-transrate-tools-dummy.deb ...
Unpacking sbuild-build-depends-transrate-tools-dummy (0.invalid.0) ...
Setting up groff-base (1.22.3-1) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-1) ...
Setting up man-db (2.7.3-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up cmake-data (3.3.2-1) ...
Setting up liblzo2-2:armhf (2.08-1.2) ...
Setting up libnettle6:armhf (3.1.1-4) ...
Setting up libicu55:armhf (55.1-5) ...
Setting up libxml2:armhf (2.9.2+zdfsg1-4) ...
Setting up libarchive13:armhf (3.1.2-11+b1) ...
Setting up libkeyutils1:armhf (1.5.9-7) ...
Setting up libkrb5support0:armhf (1.13.2+dfsg-2) ...
Setting up libk5crypto3:armhf (1.13.2+dfsg-2) ...
Setting up libkrb5-3:armhf (1.13.2+dfsg-2) ...
Setting up libgssapi-krb5-2:armhf (1.13.2+dfsg-2) ...
Setting up libidn11:armhf (1.32-3) ...
Setting up libhogweed4:armhf (3.1.1-4) ...
Setting up libffi6:armhf (3.2.1-3) ...
Setting up libp11-kit0:armhf (0.23.1-3) ...
Setting up libtasn1-6:armhf (4.7-2) ...
Setting up libgnutls-deb0-28:armhf (3.3.18-1) ...
Setting up libsasl2-modules-db:armhf (2.1.26.dfsg1-14) ...
Setting up libsasl2-2:armhf (2.1.26.dfsg1-14) ...
Setting up libldap-2.4-2:armhf (2.4.42+dfsg-2+rpi1) ...
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Setting up libssh2-1:armhf (1.5.0-2) ...
Setting up libssl1.0.0:armhf (1.0.2d-1) ...
Setting up libcurl3:armhf (7.44.0-2) ...
Setting up libexpat1:armhf (2.1.0-7) ...
Setting up libjsoncpp0v5:armhf (0.10.5-1) ...
Setting up cmake (3.3.2-1) ...
Setting up libglib2.0-0:armhf (2.46.0-2) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.8-3) ...
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.6-1) ...
Setting up gettext (0.19.6-1) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.18) ...
Setting up libarchive-zip-perl (1.53-1) ...
Setting up libfile-stripnondeterminism-perl (0.012-1) ...
Setting up libtimedate-perl (2.3000-2) ...
Setting up help2man (1.47.2) ...
Setting up libbamtools2.4.0 (2.4.0+dfsg-2) ...
Setting up libbamtools-dev (2.4.0+dfsg-2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-2+b1) ...
Setting up debhelper (9.20151005) ...
Setting up sbuild-build-depends-transrate-tools-dummy (0.invalid.0) ...
Setting up dh-strip-nondeterminism (0.012-1) ...
Processing triggers for libc-bin (2.19-19) ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.25.1-1 dpkg-dev_1.18.2 g++-5_5.2.1-16+rpi1 gcc-5_5.2.1-16+rpi1 libc6-dev_2.19-19 libstdc++-5-dev_5.2.1-16+rpi1 libstdc++6_5.2.1-16+rpi1 linux-libc-dev_3.16.7-ckt4-1+rpi1+b2
Package versions: adduser_3.113+nmu3 apt_1.0.10.2 base-files_9.4+rpi1 base-passwd_3.5.38 bash_4.3-14 binutils_2.25.1-1 bsdmainutils_9.0.6 bsdutils_1:2.26.2-9 build-essential_11.7 bzip2_1.0.6-8 cmake_3.3.2-1 cmake-data_3.3.2-1 coreutils_8.23-4 cpio_2.11+dfsg-4.1 cpp_4:5.2.1-4+rpi2 cpp-5_5.2.1-16+rpi1 dash_0.5.7-4 debconf_1.5.57 debconf-i18n_1.5.57 debfoster_2.7-2 debhelper_9.20151005 debianutils_4.5.1 dh-strip-nondeterminism_0.012-1 diffutils_1:3.3-1 dmsetup_2:1.02.104-1 dpkg_1.18.2 dpkg-dev_1.18.2 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.4.2-9 g++_4:5.2.1-4+rpi2 g++-5_5.2.1-16+rpi1 gcc_4:5.2.1-4+rpi2 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.4-4 gcc-4.9-base_4.9.3-4 gcc-5_5.2.1-16+rpi1 gcc-5-base_5.2.1-16+rpi1 gettext_0.19.6-1 gettext-base_0.19.6-1 gnupg_1.4.19-5 gpgv_1.4.19-5 grep_2.21-2 groff-base_1.22.3-1 gzip_1.6-4 help2man_1.47.2 hostname_3.16 init_1.23 init-system-helpers_1.23 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-2+rpi1 kmod_21-1 libacl1_2.2.52-2 libapparmor1_2.9.2-3 libapt-pkg4.16_1.0.10.2 libarchive-zip-perl_1.53-1 libarchive13_3.1.2-11+b1 libasan2_5.2.1-16+rpi1 libatomic1_5.2.1-16+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.4-1 libaudit1_1:2.4.4-1 libbamtools-dev_2.4.0+dfsg-2 libbamtools2.4.0_2.4.0+dfsg-2 libblkid1_2.26.2-9 libbz2-1.0_1.0.6-8 libc-bin_2.19-19 libc-dev-bin_2.19-19 libc6_2.19-19 libc6-dev_2.19-19 libcap2_1:2.24-11 libcap2-bin_1:2.24-11 libcc1-0_5.2.1-16+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.8-3 libcryptsetup4_2:1.6.6-5 libcurl3_7.44.0-2 libdb5.3_5.3.28-11 libdbus-1-3_1.8.20-1 libdebconfclient0_0.195 libdevmapper1.02.1_2:1.02.104-1 libdpkg-perl_1.18.2 libdrm2_2.4.64-1 libexpat1_2.1.0-7 libfakeroot_1.20.2-1 libfdisk1_2.26.2-9 libffi6_3.2.1-3 libfile-stripnondeterminism-perl_0.012-1 libgc1c2_1:7.2d-6.4 libgcc-5-dev_5.2.1-16+rpi1 libgcc1_1:5.2.1-16+rpi1 libgcrypt20_1.6.3-2 libgdbm3_1.8.3-13.1 libglib2.0-0_2.46.0-2 libgmp10_2:6.0.0+dfsg-7+rpi1 libgnutls-deb0-28_3.3.18-1 libgomp1_5.2.1-16+rpi1 libgpg-error0_1.19-2 libgssapi-krb5-2_1.13.2+dfsg-2 libhogweed4_3.1.1-4 libicu55_55.1-5 libidn11_1.32-3 libisl13_0.14-2 libjsoncpp0v5_0.10.5-1 libk5crypto3_1.13.2+dfsg-2 libkeyutils1_1.5.9-7 libklibc_2.0.4-2+rpi1 libkmod2_21-1 libkrb5-3_1.13.2+dfsg-2 libkrb5support0_1.13.2+dfsg-2 libldap-2.4-2_2.4.42+dfsg-2+rpi1 liblocale-gettext-perl_1.05-9 liblzma5_5.1.1alpha+20120614-2.1 liblzo2-2_2.08-1.2 libmagic1_1:5.25-2 libmount1_2.26.2-9 libmpc3_1.0.3-1 libmpfr4_3.1.3-1 libncurses5_6.0+20150810-1 libncursesw5_6.0+20150810-1 libnettle6_3.1.1-4 libnih-dbus1_1.0.3-4.3 libnih1_1.0.3-4.3 libp11-kit0_0.23.1-3 libpam-modules_1.1.8-3.1 libpam-modules-bin_1.1.8-3.1 libpam-runtime_1.1.8-3.1 libpam0g_1.1.8-3.1 libpcre3_2:8.35-7.1 libpipeline1_1.4.1-1 libpng12-0_1.2.50-2+b2 libprocps4_2:3.3.10-2 libreadline6_6.3-8+b3 librtmp1_2.4+20150115.gita107cef-1+b1 libsasl2-2_2.1.26.dfsg1-14 libsasl2-modules-db_2.1.26.dfsg1-14 libseccomp2_2.2.3-2 libselinux1_2.3-2 libsemanage-common_2.3-1 libsemanage1_2.3-1 libsepol1_2.3-2 libsmartcols1_2.26.2-9 libss2_1.42.13-1 libssh2-1_1.5.0-2 libssl1.0.0_1.0.2d-1 libstdc++-5-dev_5.2.1-16+rpi1 libstdc++6_5.2.1-16+rpi1 libsystemd0_225-1 libtasn1-6_4.7-2 libtext-charwidth-perl_0.04-7+b4 libtext-iconv-perl_1.7-5+b5 libtext-wrapi18n-perl_0.06-7.1 libtimedate-perl_2.3000-2 libtinfo5_6.0+20150810-1 libubsan0_5.2.1-16+rpi1 libudev1_225-1 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-27 libustr-1.0-1_1.0.4-5 libuuid1_2.26.2-9 libxml2_2.9.2+zdfsg1-4 linux-libc-dev_3.16.7-ckt4-1+rpi1+b2 login_1:4.2-3 lsb-base_4.1+Debian13+rpi1+nmu1 make_4.0-8.2 makedev_2.3.1-93 man-db_2.7.3-1 mawk_1.3.3-17 mount_2.26.2-9 mountall_2.54 multiarch-support_2.19-19 nano_2.4.2-1 ncurses-base_6.0+20150810-1 ncurses-bin_6.0+20150810-1 passwd_1:4.2-3 patch_2.7.5-1 perl_5.20.2-6 perl-base_5.20.2-6 perl-modules_5.20.2-6 plymouth_0.9.0-9 po-debconf_1.0.18 procps_2:3.3.10-2 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-transrate-tools-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_225-1 systemd-sysv_225-1 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-1 tzdata_2015f-1 udev_225-1 util-linux_2.26.2-9 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1 zlib1g-dev_1:1.2.8.dfsg-2+b1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
└──────────────────────────────────────────────────────────────────────────────┘
Unpack source
─────────────
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Wed Sep 30 11:04:03 2015 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./transrate-tools_1.0.0-1.dsc
dpkg-source: info: extracting transrate-tools in transrate-tools-1.0.0
dpkg-source: info: unpacking transrate-tools_1.0.0.orig.tar.gz
dpkg-source: info: unpacking transrate-tools_1.0.0-1.debian.tar.xz
dpkg-source: info: applying cmake-bamtools
Check disc space
────────────────
Sufficient free space for build
User Environment
────────────────
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=111
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-f324528f-c9e1-4460-9ba3-371e438bd985
SCHROOT_UID=106
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package transrate-tools
dpkg-buildpackage: source version 1.0.0-1
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build transrate-tools-1.0.0
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_auto_configure -a
cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var
-- The C compiler identification is GNU 5.2.1
-- The CXX compiler identification is GNU 5.2.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found bamtools: /usr/lib/arm-linux-gnueabihf/libbamtools.so
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.8")
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_INSTALL_LOCALSTATEDIR
CMAKE_INSTALL_SYSCONFDIR
-- Build files have been written to: /«PKGBUILDDIR»/obj-arm-linux-gnueabihf
dh_auto_build -a
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make[1]: Entering directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
/usr/bin/cmake -H/«PKGBUILDDIR» -B/«PKGBUILDDIR»/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/CMakeFiles /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
make -f src/CMakeFiles/bam-read.dir/build.make src/CMakeFiles/bam-read.dir/depend
make[3]: Entering directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
cd /«PKGBUILDDIR»/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /«PKGBUILDDIR» /«PKGBUILDDIR»/src /«PKGBUILDDIR»/obj-arm-linux-gnueabihf /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/src /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/src/CMakeFiles/bam-read.dir/DependInfo.cmake --color=
Scanning dependencies of target bam-read
make[3]: Leaving directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
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make[3]: Entering directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object src/CMakeFiles/bam-read.dir/bam-read.cpp.o
cd /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -I/usr/include/bamtools -o CMakeFiles/bam-read.dir/bam-read.cpp.o -c /«PKGBUILDDIR»/src/bam-read.cpp
[ 50%] Building CXX object src/CMakeFiles/bam-read.dir/pileup.cpp.o
cd /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -I/usr/include/bamtools -o CMakeFiles/bam-read.dir/pileup.cpp.o -c /«PKGBUILDDIR»/src/pileup.cpp
[ 75%] Building CXX object src/CMakeFiles/bam-read.dir/segmenter.cpp.o
cd /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/src && /usr/bin/c++ -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -I/usr/include/bamtools -o CMakeFiles/bam-read.dir/segmenter.cpp.o -c /«PKGBUILDDIR»/src/segmenter.cpp
/«PKGBUILDDIR»/src/segmenter.cpp: In member function 'void Segmenter::load_states()':
/«PKGBUILDDIR»/src/segmenter.cpp:26:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0 ; i < seq.size() ; ++i) {
^
[100%] Linking CXX executable bam-read
cd /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bam-read.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -Wl,-z,relro CMakeFiles/bam-read.dir/bam-read.cpp.o CMakeFiles/bam-read.dir/pileup.cpp.o CMakeFiles/bam-read.dir/segmenter.cpp.o -o bam-read -rdynamic -lbamtools
make[3]: Leaving directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
[100%] Built target bam-read
make[2]: Leaving directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /«PKGBUILDDIR»/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
dh_auto_test -a
make -j1 test ARGS\+=-j1
make[1]: Entering directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j1
Test project /«PKGBUILDDIR»/obj-arm-linux-gnueabihf
No tests were found!!!
make[1]: Leaving directory '/«PKGBUILDDIR»/obj-arm-linux-gnueabihf'
fakeroot debian/rules binary-arch
dh binary-arch
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make[1]: Entering directory '/«PKGBUILDDIR»'
dh_auto_install
help2man --no-info --include debian/bam-read-man-include \
obj*/src/bam-read > debian/bam-read.1
make[1]: Leaving directory '/«PKGBUILDDIR»'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
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dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_strip -a
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dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/transrate-tools/usr/bin/bam-read contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'transrate-tools' in '../transrate-tools_1.0.0-1_armhf.deb'.
dpkg-genchanges -B -mRaspbian nitrogen6x test autobuilder <root@raspbian.org> >../transrate-tools_1.0.0-1_armhf.changes
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build transrate-tools-1.0.0
dpkg-buildpackage: binary-only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
Build finished at 20151012-0731
Finished
────────
I: Built successfully
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build Chroot │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Changes │
└──────────────────────────────────────────────────────────────────────────────┘
transrate-tools_1.0.0-1_armhf.changes:
──────────────────────────────────────
Format: 1.8
Date: Wed, 30 Sep 2015 20:03:17 +0900
Source: transrate-tools
Binary: transrate-tools
Architecture: armhf
Version: 1.0.0-1
Distribution: stretch-staging
Urgency: low
Maintainer: Raspbian nitrogen6x test autobuilder <root@raspbian.org>
Changed-By: Charles Plessy <plessy@debian.org>
Description:
transrate-tools - helper for transrate
Closes: 800412
Changes:
transrate-tools (1.0.0-1) unstable; urgency=low
.
* Team upload.
.
[ Michael R. Crusoe ]
* Initial release (Closes: #800412)
Checksums-Sha1:
51fe8bab2dc3293a83cc3cf9b7259aeec1fc9903 13466 transrate-tools_1.0.0-1_armhf.deb
Checksums-Sha256:
3ac17af711736a842c24d54484c8ef0a6cd8bd6f38cc0722038a80377de172b4 13466 transrate-tools_1.0.0-1_armhf.deb
Files:
f992f95414fe1d90c01ade666113b729 13466 science optional transrate-tools_1.0.0-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
transrate-tools_1.0.0-1_armhf.deb
─────────────────────────────────
new debian package, version 2.0.
size 13466 bytes: control archive=673 bytes.
557 bytes, 15 lines control
276 bytes, 4 lines md5sums
Package: transrate-tools
Version: 1.0.0-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 39
Depends: libbamtools2.4.0, libc6 (>= 2.4), libgcc1 (>= 1:4.4.0), libstdc++6 (>= 5.2)
Section: science
Priority: optional
Homepage: http://hibberdlab.com/transrate/
Description: helper for transrate
Transrate is a library and command-line tool for quality assessment of de-novo
transcriptome assemblies.
.
This package provides command line tools used by transrate to process BAM
files.
drwxr-xr-x root/root 0 2015-10-12 07:31 ./
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/bin/
-rwxr-xr-x root/root 26320 2015-10-12 07:31 ./usr/bin/bam-read
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/share/
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/share/doc/
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/share/doc/transrate-tools/
-rw-r--r-- root/root 191 2015-09-30 11:03 ./usr/share/doc/transrate-tools/changelog.Debian.gz
-rw-r--r-- root/root 1378 2015-09-30 05:03 ./usr/share/doc/transrate-tools/copyright
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/share/man/
drwxr-xr-x root/root 0 2015-10-12 07:31 ./usr/share/man/man1/
-rw-r--r-- root/root 441 2015-10-12 07:31 ./usr/share/man/man1/bam-read.1.gz
┌──────────────────────────────────────────────────────────────────────────────┐
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
┌──────────────────────────────────────────────────────────────────────────────┐
│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Build Architecture: armhf
Build-Space: 596
Build-Time: 57
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 293
Job: transrate-tools_1.0.0-1
Machine Architecture: armhf
Package: transrate-tools
Package-Time: 409
Source-Version: 1.0.0-1
Space: 596
Status: successful
Version: 1.0.0-1
────────────────────────────────────────────────────────────────────────────────
Finished at 20151012-0731
Build needed 00:06:49, 596k disc space