tortoize →
2.0.10-1 →
armhf → 2023-01-07 14:04:19
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-02
+==============================================================================+
| tortoize 2.0.10-1 (armhf) Sat, 07 Jan 2023 13:46:49 +0000 |
+==============================================================================+
Package: tortoize
Version: 2.0.10-1
Source Version: 2.0.10-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-d1edbb32-b98d-4a54-8ba0-8ac1c654f1a0' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.5 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.3 MB]
Fetched 27.9 MB in 29s (959 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'tortoize' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/tortoize.git
Please use:
git clone https://salsa.debian.org/med-team/tortoize.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 333 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main tortoize 2.0.10-1 (dsc) [2122 B]
Get:2 http://172.17.4.1/private bookworm-staging/main tortoize 2.0.10-1 (tar) [314 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main tortoize 2.0.10-1 (diff) [17.5 kB]
Fetched 333 kB in 0s (2660 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/tortoize-Jscxth/tortoize-2.0.10' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/tortoize-Jscxth' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-6pcIGS/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-6pcIGS/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-6pcIGS/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (2688 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libldap-common libpam-cap netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 36 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (22.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 13212 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), libcifpp-dev, zlib1g-dev, libmcfp-dev, libboost-dev, libboost-regex-dev, cmake, libzeep-dev, mrc
Filtered Build-Depends: debhelper-compat (= 13), libcifpp-dev, zlib1g-dev, libmcfp-dev, libboost-dev, libboost-regex-dev, cmake, libzeep-dev, mrc
dpkg-deb: building package 'sbuild-build-depends-tortoize-dummy' in '/<<BUILDDIR>>/resolver-6pcIGS/apt_archive/sbuild-build-depends-tortoize-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-tortoize-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Sources [539 B]
Get:5 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ Packages [621 B]
Fetched 2493 B in 1s (3347 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install tortoize build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libldap-common libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libboost-date-time-dev libboost-date-time1.74-dev
libboost-date-time1.74.0 libboost-dev libboost-iostreams1.74.0
libboost-program-options-dev libboost-program-options1.74-dev
libboost-program-options1.74.0 libboost-regex-dev libboost-regex1.74-dev
libboost-regex1.74.0 libboost-serialization1.74-dev
libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev
libboost-system1.74.0 libboost1.74-dev libbrotli1 libcifpp-data libcifpp-dev
libcifpp5 libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libicu-dev libicu72 libjsoncpp25
libmagic-mgc libmagic1 libmcfp-dev libnghttp2-14 libpipeline1 libpkgconf3
libproc2-0 libpsl5 librhash0 librtmp1 libssh2-1 libsub-override-perl libtool
libuchardet0 libuv1 libxml2 libzeep-dev libzeep5.1 m4 man-db mrc pkg-config
pkgconf pkgconf-bin po-debconf procps zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format
elpa-cmake-mode ninja-build dh-make gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip libboost-doc libboost1.74-doc
libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
libboost-context1.74-dev libboost-contract1.74-dev
libboost-coroutine1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev
libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
libboost-python1.74-dev libboost-random1.74-dev libboost-stacktrace1.74-dev
libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev
libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev
libmpfrc++-dev libntl-dev libboost-nowide1.74-dev icu-doc libtool-doc
gfortran | fortran95-compiler gcj-jdk libzeep-doc m4-doc apparmor less
www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl publicsuffix
libltdl-dev libmail-sendmail-perl psmisc
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libboost-date-time-dev libboost-date-time1.74-dev
libboost-date-time1.74.0 libboost-dev libboost-program-options-dev
libboost-program-options1.74-dev libboost-program-options1.74.0
libboost-regex-dev libboost-regex1.74-dev libboost-regex1.74.0
libboost-serialization1.74-dev libboost-serialization1.74.0
libboost-system-dev libboost-system1.74-dev libboost-system1.74.0
libboost1.74-dev libbrotli1 libcifpp-data libcifpp-dev libcifpp5 libcurl4
libdebhelper-perl libelf1 libexpat1 libfile-stripnondeterminism-perl
libicu-dev libicu72 libjsoncpp25 libmagic-mgc libmagic1 libmcfp-dev
libnghttp2-14 libpipeline1 libpkgconf3 libproc2-0 libpsl5 librhash0 librtmp1
libssh2-1 libsub-override-perl libtool libuchardet0 libuv1 libxml2
libzeep-dev libzeep5.1 m4 man-db mrc pkg-config pkgconf pkgconf-bin
po-debconf procps sbuild-build-depends-tortoize-dummy zlib1g-dev
The following packages will be upgraded:
libboost-iostreams1.74.0
1 upgraded, 75 newly installed, 0 to remove and 35 not upgraded.
Need to get 52.0 MB of archives.
After this operation, 346 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-6pcIGS/apt_archive ./ sbuild-build-depends-tortoize-dummy 0.invalid.0 [908 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.1-1 [1341 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf libproc2-0 armhf 2:4.0.2-3 [53.6 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf procps armhf 2:4.0.2-3 [679 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-4 [295 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-4 [120 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-4 [65.8 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-1 [260 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1 [570 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libarchive13 armhf 3.6.2-1 [293 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b2 [260 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.51.0-1 [60.5 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3+b1 [161 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.87.0-1 [332 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libjsoncpp25 armhf 1.9.5-4 [66.7 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf librhash0 armhf 1.4.3-3 [142 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libuv1 armhf 1.44.2-1+rpi1 [125 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf cmake-data all 3.25.1-1 [2026 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf cmake armhf 3.25.1-1 [3859 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-2 [19.4 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-2 [8556 B]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.4 [942 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf icu-devtools armhf 72.1-3 [175 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf libboost1.74-dev armhf 1.74.0-18.1 [9509 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf libboost-date-time1.74.0 armhf 1.74.0-18.1 [217 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf libboost-serialization1.74.0 armhf 1.74.0-18.1 [296 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf libboost-serialization1.74-dev armhf 1.74.0-18.1 [362 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf libboost-date-time1.74-dev armhf 1.74.0-18.1 [226 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libboost-date-time-dev armhf 1.74.0.3+b4 [4604 B]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libboost-dev armhf 1.74.0.3+b4 [4824 B]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0-18.1 [235 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libboost-program-options1.74.0 armhf 1.74.0-18.1 [306 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libboost-program-options1.74-dev armhf 1.74.0-18.1 [345 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libboost-program-options-dev armhf 1.74.0.3+b4 [4616 B]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libboost-regex1.74.0 armhf 1.74.0-18.1 [420 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libicu-dev armhf 72.1-3 [9959 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libboost-regex1.74-dev armhf 1.74.0-18.1 [525 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libboost-regex-dev armhf 1.74.0.3+b4 [4876 B]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libboost-system1.74.0 armhf 1.74.0-18.1 [218 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libboost-system1.74-dev armhf 1.74.0-18.1 [219 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libboost-system-dev armhf 1.74.0.3+b4 [4744 B]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libcifpp-data all 5.0.5-6 [452 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf libcifpp5 armhf 5.0.5-6 [669 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libcifpp-dev armhf 5.0.5-6 [85.7 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf libmcfp-dev armhf 1.2.2-3 [15.4 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf libpkgconf3 armhf 1.8.0-12 [31.0 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libzeep5.1 armhf 5.1.7-1 [496 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf pkgconf-bin armhf 1.8.0-12 [27.6 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf pkgconf armhf 1.8.0-12 [25.6 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf pkg-config armhf 1.8.0-12 [13.5 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libzeep-dev armhf 5.1.7-1 [78.8 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf mrc armhf 1.3.4-1 [39.1 kB]
debconf: delaying package configuration, since apt-utils is not installed
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.6-armmp armhf (armv7l)
Toolchain package versions: binutils_2.39.50.20221208-5+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-10+rpi1 gcc-12_12.2.0-10+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-10+rpi1 libstdc++6_12.2.0-10+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 apt_2.5.4 aptitude_0.8.13-5 aptitude-common_0.8.13-5 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 binutils_2.39.50.20221208-5+rpi1 binutils-arm-linux-gnueabihf_2.39.50.20221208-5+rpi1 binutils-common_2.39.50.20221208-5+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 cmake_3.25.1-1 cmake-data_3.25.1-1 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-10+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.80 debhelper_13.11.4 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-2 diffutils_1:3.8-1 dirmngr_2.2.40-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-10+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-10+rpi1 gcc-12-base_12.2.0-10+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 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+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.9eDonHAx/trustedkeys.kbx': General error
gpgv: Signature made Mon Jan 2 09:10:31 2023 UTC
gpgv: using RSA key A72B6824226BB407E24B9E80587503EC7AE7EDCE
gpgv: issuer "maarten@hekkelman.com"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./tortoize_2.0.10-1.dsc
dpkg-source: info: extracting tortoize in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking tortoize_2.0.10.orig.tar.gz
dpkg-source: info: unpacking tortoize_2.0.10-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying libzeep-version.patch
dpkg-source: info: applying include-dssp.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
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SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package tortoize
dpkg-buildpackage: info: source version 2.0.10-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DBUILD_SHARED_LIBS=ON
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DBUILD_SHARED_LIBS=ON ..
-- The CXX compiler identification is GNU 12.2.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for C++ include filesystem
-- Looking for C++ include filesystem - found
-- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED
-- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED - Success
-- Found Mrc: /usr/bin/mrc (found version "1.3.4")
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.13")
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.74.0/BoostConfig.cmake (found version "1.74.0") found components: regex
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.74.0/BoostConfig.cmake (found suitable version "1.74.0", minimum required is "1.70.0") found components: system date_time regex
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
FETCHCONTENT_FULLY_DISCONNECTED
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a
cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/tortoize.dir/build.make CMakeFiles/tortoize.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 20%] Generating tortoize_rsrc.obj
/usr/bin/mrc -o /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/tortoize_rsrc.obj /<<PKGBUILDDIR>>/rsrc/rama-data.bin /<<PKGBUILDDIR>>/rsrc/torsion-data.bin /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic /usr/share/libcifpp/mmcif_ma.dic
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/tortoize.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/tortoize.dir/build.make CMakeFiles/tortoize.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object CMakeFiles/tortoize.dir/src/tortoize.cpp.o
[ 60%] Building CXX object CMakeFiles/tortoize.dir/src/dssp.cpp.o
[ 80%] Building CXX object CMakeFiles/tortoize.dir/src/tortoize-main.cpp.o
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -MD -MT CMakeFiles/tortoize.dir/src/dssp.cpp.o -MF CMakeFiles/tortoize.dir/src/dssp.cpp.o.d -o CMakeFiles/tortoize.dir/src/dssp.cpp.o -c /<<PKGBUILDDIR>>/src/dssp.cpp
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -MD -MT CMakeFiles/tortoize.dir/src/tortoize.cpp.o -MF CMakeFiles/tortoize.dir/src/tortoize.cpp.o.d -o CMakeFiles/tortoize.dir/src/tortoize.cpp.o -c /<<PKGBUILDDIR>>/src/tortoize.cpp
/usr/bin/c++ -DBOOST_ALL_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_REGEX_DYN_LINK -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -I/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++17 -MD -MT CMakeFiles/tortoize.dir/src/tortoize-main.cpp.o -MF CMakeFiles/tortoize.dir/src/tortoize-main.cpp.o.d -o CMakeFiles/tortoize.dir/src/tortoize-main.cpp.o -c /<<PKGBUILDDIR>>/src/tortoize-main.cpp
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
from /usr/include/c++/12/functional:64,
from /usr/include/cif++/condition.hpp:30,
from /usr/include/cif++/category.hpp:33,
from /usr/include/cif++/datablock.hpp:31,
from /usr/include/cif++/file.hpp:31,
from /usr/include/cif++.hpp:30,
from /<<PKGBUILDDIR>>/src/dssp.hpp:34,
from /<<PKGBUILDDIR>>/src/dssp.cpp:33:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__push_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare&) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<accumulator::candidate*, vector<accumulator::candidate> >; _Distance = int; _Tp = accumulator::candidate; _Compare = __gnu_cxx::__ops::_Iter_less_val]':
/usr/include/c++/12/bits/stl_heap.h:135:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<accumulator::candidate*, std::vector<accumulator::candidate> >' changed in GCC 7.1
135 | __push_heap(_RandomAccessIterator __first,
| ^~~~~~~~~~~
In file included from /usr/include/c++/12/string:50,
from /usr/include/c++/12/bits/locale_classes.h:40,
from /usr/include/c++/12/bits/ios_base.h:41,
from /usr/include/c++/12/iomanip:40,
from /<<PKGBUILDDIR>>/src/dssp.cpp:29:
/usr/include/c++/12/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<dssp::residue*, vector<dssp::residue> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<DSSP_impl::findRes(const std::string&, int)::<lambda(auto:2&)> >]':
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<dssp::residue*, std::vector<dssp::residue> >' changed in GCC 7.1
2059 | __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
| ^~~~~~~~~
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<dssp::residue*, std::vector<dssp::residue> >' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:70,
from /usr/include/cif++/forward_decl.hpp:30,
from /usr/include/cif++/datablock.hpp:29:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const accumulator::candidate&}; _Tp = accumulator::candidate; _Alloc = std::allocator<accumulator::candidate>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<accumulator::candidate>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator<accumulator::candidate>]',
inlined from 'void accumulator::operator()(const point&, const point&, double, double)' at /<<PKGBUILDDIR>>/src/dssp.cpp:577:17,
inlined from 'double dssp::residue::CalculateSurface(const point&, float, const std::vector<dssp::residue*>&)' at /<<PKGBUILDDIR>>/src/dssp.cpp:640:14:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<accumulator::candidate*, std::vector<accumulator::candidate> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator<accumulator::candidate>]',
inlined from 'void accumulator::operator()(const point&, const point&, double, double)' at /<<PKGBUILDDIR>>/src/dssp.cpp:577:17,
inlined from 'double dssp::residue::CalculateSurface(const point&, float, const std::vector<dssp::residue*>&)' at /<<PKGBUILDDIR>>/src/dssp.cpp:641:14:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<accumulator::candidate*, std::vector<accumulator::candidate> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator<accumulator::candidate>]',
inlined from 'void accumulator::operator()(const point&, const point&, double, double)' at /<<PKGBUILDDIR>>/src/dssp.cpp:577:17,
inlined from 'double dssp::residue::CalculateSurface(const point&, float, const std::vector<dssp::residue*>&)' at /<<PKGBUILDDIR>>/src/dssp.cpp:642:14:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<accumulator::candidate*, std::vector<accumulator::candidate> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator<accumulator::candidate>]',
inlined from 'void accumulator::operator()(const point&, const point&, double, double)' at /<<PKGBUILDDIR>>/src/dssp.cpp:577:17,
inlined from 'double dssp::residue::CalculateSurface(const point&, float, const std::vector<dssp::residue*>&)' at /<<PKGBUILDDIR>>/src/dssp.cpp:643:14:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<accumulator::candidate*, std::vector<accumulator::candidate> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = accumulator::candidate; _Alloc = std::allocator<accumulator::candidate>]',
inlined from 'void accumulator::operator()(const point&, const point&, double, double)' at /<<PKGBUILDDIR>>/src/dssp.cpp:577:17,
inlined from 'double dssp::residue::CalculateSurface(const point&, float, const std::vector<dssp::residue*>&)' at /<<PKGBUILDDIR>>/src/dssp.cpp:646:15:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<accumulator::candidate*, std::vector<accumulator::candidate> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {dssp::residue}; _Tp = dssp::residue; _Alloc = std::allocator<dssp::residue>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<dssp::residue>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {dssp::residue}; _Tp = dssp::residue; _Alloc = std::allocator<dssp::residue>]',
inlined from 'DSSP_impl::DSSP_impl(const cif::datablock&, int, int)' at /<<PKGBUILDDIR>>/src/dssp.cpp:1411:25:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<dssp::residue*, std::vector<dssp::residue> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<dssp::residue*, vector<dssp::residue> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<DSSP_impl::findRes(const std::string&, int)::<lambda(auto:2&)> >]',
inlined from '_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator<dssp::residue*, vector<dssp::residue> >; _Predicate = DSSP_impl::findRes(const std::string&, int)::<lambda(auto:2&)>]' at /usr/include/c++/12/bits/stl_algo.h:3877:28,
inlined from 'auto DSSP_impl::findRes(const std::string&, int)' at /<<PKGBUILDDIR>>/src/dssp.cpp:1344:22,
inlined from 'void DSSP_impl::calculateSecondaryStructure()' at /<<PKGBUILDDIR>>/src/dssp.cpp:1488:20:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<dssp::residue*, std::vector<dssp::residue> >' changed in GCC 7.1
2112 | return __find_if(__first, __last, __pred,
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2113 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<dssp::residue*, vector<dssp::residue> >; _Predicate = __gnu_cxx::__ops::_Iter_pred<DSSP_impl::findRes(const std::string&, int)::<lambda(auto:2&)> >]',
inlined from '_IIter std::find_if(_IIter, _IIter, _Predicate) [with _IIter = __gnu_cxx::__normal_iterator<dssp::residue*, vector<dssp::residue> >; _Predicate = DSSP_impl::findRes(const std::string&, int)::<lambda(auto:2&)>]' at /usr/include/c++/12/bits/stl_algo.h:3877:28,
inlined from 'auto DSSP_impl::findRes(const std::string&, int)' at /<<PKGBUILDDIR>>/src/dssp.cpp:1344:22,
inlined from 'void DSSP_impl::calculateSecondaryStructure()' at /<<PKGBUILDDIR>>/src/dssp.cpp:1497:20:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<dssp::residue*, std::vector<dssp::residue> >' changed in GCC 7.1
2112 | return __find_if(__first, __last, __pred,
| ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
2113 | std::__iterator_category(__first));
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[100%] Linking CXX executable tortoize
/usr/bin/cmake -E cmake_link_script CMakeFiles/tortoize.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now CMakeFiles/tortoize.dir/src/dssp.cpp.o CMakeFiles/tortoize.dir/src/tortoize.cpp.o "CMakeFiles/tortoize.dir/src/tortoize-main.cpp.o" tortoize_rsrc.obj -o tortoize /usr/lib/arm-linux-gnueabihf/libcifpp.so.5.0.5 /usr/lib/arm-linux-gnueabihf/libzeep.so.5.1.7 /usr/lib/arm-linux-gnueabihf/libz.so -latomic /usr/lib/arm-linux-gnueabihf/libboost_regex.so.1.74.0 /usr/lib/arm-linux-gnueabihf/libboost_date_time.so.1.74.0
/usr/bin/ld: warning: tortoize_rsrc.obj: missing .note.GNU-stack section implies executable stack
/usr/bin/ld: NOTE: This behaviour is deprecated and will be removed in a future version of the linker
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target tortoize
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test -a
cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=--verbose ARGS\+=-j4
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j4
UpdateCTestConfiguration from :/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Parse Config file:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
UpdateCTestConfiguration from :/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Parse Config file:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
No tests were found!!!
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_auto_install --destdir=debian/tortoize/ -a
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tortoize AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tortoize/usr/bin/tortoize
-- Installing: /<<PKGBUILDDIR>>/debian/tortoize/usr/share/man/man1/tortoize.1
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: debian/tortoize/usr/bin/tortoize contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tortoize/usr/bin/tortoize was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'tortoize-dbgsym' in '../tortoize-dbgsym_2.0.10-1_armhf.deb'.
dpkg-deb: building package 'tortoize' in '../tortoize_2.0.10-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../tortoize_2.0.10-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../tortoize_2.0.10-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-01-07T14:04:11Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
tortoize_2.0.10-1_armhf.changes:
--------------------------------
Format: 1.8
Date: Mon, 02 Jan 2023 10:02:57 +0100
Source: tortoize
Binary: tortoize tortoize-dbgsym
Architecture: armhf
Version: 2.0.10-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Maarten L. Hekkelman <maarten@hekkelman.com>
Description:
tortoize - Application to calculate ramachandran z-scores
Changes:
tortoize (2.0.10-1) unstable; urgency=medium
.
* New upstream release.
Checksums-Sha1:
506d4df11eb6bf93b7ad1dabbfdee9ce8cbace53 2808428 tortoize-dbgsym_2.0.10-1_armhf.deb
0c2ee7f93ed6e29b7522f4f63f360b865fd1bfe3 6746 tortoize_2.0.10-1_armhf.buildinfo
90984a3bf314c02b44cdfa6115caf36a7ece4f9a 736148 tortoize_2.0.10-1_armhf.deb
Checksums-Sha256:
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bdea75e1cc64eb053788cacc83aa5e133668691bb80c176082278bfebc3660b4 6746 tortoize_2.0.10-1_armhf.buildinfo
b4eca979513f13dce3738bda6c297f7ec5a1f5d6d5db12c60899698446889a56 736148 tortoize_2.0.10-1_armhf.deb
Files:
37e345c0a8c9ecf04b8fbe20c1064ba9 2808428 debug optional tortoize-dbgsym_2.0.10-1_armhf.deb
a5d54465b8a6859abdf97cbc2b0d126c 6746 science optional tortoize_2.0.10-1_armhf.buildinfo
1b2ae34641fdc0974db2fe6d79a2078f 736148 science optional tortoize_2.0.10-1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
tortoize-dbgsym_2.0.10-1_armhf.deb
----------------------------------
new Debian package, version 2.0.
size 2808428 bytes: control archive=536 bytes.
377 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: tortoize-dbgsym
Source: tortoize
Version: 2.0.10-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2847
Depends: tortoize (= 2.0.10-1)
Section: debug
Priority: optional
Description: debug symbols for tortoize
Build-Ids: 4e096a607536f1c559aee5f87709c8ed4c5a9cb2
drwxr-xr-x root/root 0 2023-01-02 09:02 ./
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/lib/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/lib/debug/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/lib/debug/.build-id/4e/
-rw-r--r-- root/root 2905020 2023-01-02 09:02 ./usr/lib/debug/.build-id/4e/096a607536f1c559aee5f87709c8ed4c5a9cb2.debug
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-01-02 09:02 ./usr/share/doc/tortoize-dbgsym -> tortoize
tortoize_2.0.10-1_armhf.deb
---------------------------
new Debian package, version 2.0.
size 736148 bytes: control archive=1012 bytes.
849 bytes, 17 lines control
539 bytes, 8 lines md5sums
Package: tortoize
Version: 2.0.10-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 10919
Depends: libc6 (>= 2.34), libcifpp5 (>= 5.0.5), libgcc-s1 (>= 3.5), libstdc++6 (>= 11), libzeep5.1 (>= 5.1.7)
Section: science
Priority: optional
Homepage: https://github.com/PDB-REDO/tortoize
Description: Application to calculate ramachandran z-scores
Tortoize validates protein structure models by checking the
Ramachandran plot and side-chain rotamer distributions. Quality
Z-scores are given at the residue level and at the model level
(ramachandran-z and torsions-z). Higher scores are better. To compare
models or to describe the reliability of the model Z-scores jackknife-
based standard deviations are also reported (ramachandran-jackknife-sd
and torsion-jackknife-sd).
drwxr-xr-x root/root 0 2023-01-02 09:02 ./
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/bin/
-rwxr-xr-x root/root 11163480 2023-01-02 09:02 ./usr/bin/tortoize
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/doc/tortoize/
-rw-r--r-- root/root 748 2022-12-07 12:48 ./usr/share/doc/tortoize/README.md
-rw-r--r-- root/root 590 2023-01-02 09:02 ./usr/share/doc/tortoize/README.test
-rw-r--r-- root/root 593 2023-01-02 09:02 ./usr/share/doc/tortoize/changelog.Debian.gz
-rw-r--r-- root/root 269 2022-12-07 12:48 ./usr/share/doc/tortoize/changelog.gz
-rw-r--r-- root/root 1859 2023-01-02 09:02 ./usr/share/doc/tortoize/copyright
-rw-r--r-- root/root 388 2023-01-02 09:02 ./usr/share/doc/tortoize/run-unit-test
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/man/
drwxr-xr-x root/root 0 2023-01-02 09:02 ./usr/share/man/man1/
-rw-r--r-- root/root 966 2023-01-02 09:02 ./usr/share/man/man1/tortoize.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 62400
Build-Time: 331
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 652
Job: tortoize_2.0.10-1
Machine Architecture: armhf
Package: tortoize
Package-Time: 1042
Source-Version: 2.0.10-1
Space: 62400
Status: successful
Version: 2.0.10-1
--------------------------------------------------------------------------------
Finished at 2023-01-07T14:04:11Z
Build needed 00:17:22, 62400k disc space