tantan →
13-4 →
armhf → 2016-03-18 12:37:24
sbuild (Debian sbuild) 0.66.0 (04 Oct 2015) on bm-wb-02
+==============================================================================+
| tantan 13-4 (armhf) 18 Mar 2016 12:28 |
+==============================================================================+
Package: tantan
Version: 13-4
Source Version: 13-4
Distribution: stretch-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'build/tantan-6G2D0G/tantan-13' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/tantan-6G2D0G' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/stretch-staging-armhf-sbuild-93d8d9b3-6fc0-4587-aa39-e88baf00b8e3' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private stretch-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private stretch-staging/main Sources [8812 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf Packages [10.9 MB]
Fetched 19.7 MB in 21s (922 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'tantan' packaging is maintained in the 'Git' version control system at:
https://anonscm.debian.org/git/debian-med/tantan.git
Please use:
git clone https://anonscm.debian.org/git/debian-med/tantan.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 112 kB of source archives.
Get:1 http://172.17.0.1/private stretch-staging/main tantan 13-4 (dsc) [1873 B]
Get:2 http://172.17.0.1/private stretch-staging/main tantan 13-4 (tar) [102 kB]
Get:3 http://172.17.0.1/private stretch-staging/main tantan 13-4 (diff) [8036 B]
Fetched 112 kB in 0s (2580 kB/s)
Download complete and in download only mode
Check architectures
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Check dependencies
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Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-K4cfOo/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ Sources [194 B]
Get:5 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ Packages [508 B]
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Reading package lists...
+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 78 not upgraded.
Need to get 0 B/764 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-K4cfOo/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [764 B]
debconf: delaying package configuration, since apt-utils is not installed
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Merged Build-Depends: debhelper (>= 9)
Filtered Build-Depends: debhelper (>= 9)
dpkg-deb: building package 'sbuild-build-depends-tantan-dummy' in '/<<BUILDDIR>>/resolver-Yj3e09/apt_archive/sbuild-build-depends-tantan-dummy.deb'.
OK
Get:1 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ InRelease
Ign:1 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ InRelease
Get:2 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ Release [2119 B]
Get:2 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ Release [2119 B]
Get:3 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ Release.gpg [299 B]
Get:3 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ Release.gpg [299 B]
Get:4 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ Sources [185 B]
Get:5 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ Packages [505 B]
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
+------------------------------------------------------------------------------+
| Install tantan build dependencies (apt-based resolver) |
+------------------------------------------------------------------------------+
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
autotools-dev bsdmainutils debhelper dh-strip-nondeterminism file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3
libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libicu55 libmagic1
libpipeline1 libunistring0 libxml2 man-db po-debconf
Suggested packages:
wamerican | wordlist whois vacation dh-make gettext-doc autopoint
libasprintf-dev libgettextpo-dev groff less www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx-cur libglib2.0-data shared-mime-info xdg-user-dirs
xml-core libmail-sendmail-perl
The following NEW packages will be installed:
autotools-dev bsdmainutils debhelper dh-strip-nondeterminism file gettext
gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3
libffi6 libfile-stripnondeterminism-perl libglib2.0-0 libicu55 libmagic1
libpipeline1 libunistring0 libxml2 man-db po-debconf
sbuild-build-depends-tantan-dummy
0 upgraded, 22 newly installed, 0 to remove and 78 not upgraded.
Need to get 16.4 MB/16.4 MB of archives.
After this operation, 57.6 MB of additional disk space will be used.
Get:1 file:/<<BUILDDIR>>/resolver-Yj3e09/apt_archive ./ sbuild-build-depends-tantan-dummy 0.invalid.0 [768 B]
Get:2 http://172.17.0.1/private stretch-staging/main armhf groff-base armhf 1.22.3-7 [1083 kB]
Get:3 http://172.17.0.1/private stretch-staging/main armhf bsdmainutils armhf 9.0.6 [177 kB]
Get:4 http://172.17.0.1/private stretch-staging/main armhf libpipeline1 armhf 1.4.1-2 [23.7 kB]
Get:5 http://172.17.0.1/private stretch-staging/main armhf man-db armhf 2.7.5-1 [975 kB]
Get:6 http://172.17.0.1/private stretch-staging/main armhf libunistring0 armhf 0.9.3-5.2 [253 kB]
Get:7 http://172.17.0.1/private stretch-staging/main armhf libmagic1 armhf 1:5.25-2 [250 kB]
Get:8 http://172.17.0.1/private stretch-staging/main armhf file armhf 1:5.25-2 [61.2 kB]
Get:9 http://172.17.0.1/private stretch-staging/main armhf gettext-base armhf 0.19.7-2 [111 kB]
Get:10 http://172.17.0.1/private stretch-staging/main armhf libicu55 armhf 55.1-7 [7380 kB]
Get:11 http://172.17.0.1/private stretch-staging/main armhf libxml2 armhf 2.9.3+dfsg1-1 [800 kB]
Get:12 http://172.17.0.1/private stretch-staging/main armhf autotools-dev all 20150820.1 [71.7 kB]
Get:13 http://172.17.0.1/private stretch-staging/main armhf libffi6 armhf 3.2.1-4 [18.5 kB]
Get:14 http://172.17.0.1/private stretch-staging/main armhf libglib2.0-0 armhf 2.46.2-3 [2482 kB]
Get:15 http://172.17.0.1/private stretch-staging/main armhf libcroco3 armhf 0.6.11-1 [131 kB]
Get:16 http://172.17.0.1/private stretch-staging/main armhf gettext armhf 0.19.7-2 [1400 kB]
Get:17 http://172.17.0.1/private stretch-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:18 http://172.17.0.1/private stretch-staging/main armhf po-debconf all 1.0.19 [249 kB]
Get:19 http://172.17.0.1/private stretch-staging/main armhf libarchive-zip-perl all 1.56-2 [94.9 kB]
Get:20 http://172.17.0.1/private stretch-staging/main armhf libfile-stripnondeterminism-perl all 0.016-1 [11.9 kB]
Get:21 http://172.17.0.1/private stretch-staging/main armhf dh-strip-nondeterminism all 0.016-1 [6998 B]
Get:22 http://172.17.0.1/private stretch-staging/main armhf debhelper all 9.20160306 [815 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Processing triggers for libc-bin (2.21-7) ...
Setting up groff-base (1.22.3-7) ...
Setting up bsdmainutils (9.0.6) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libpipeline1:armhf (1.4.1-2) ...
Setting up man-db (2.7.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libunistring0:armhf (0.9.3-5.2) ...
Setting up libmagic1:armhf (1:5.25-2) ...
Setting up file (1:5.25-2) ...
Setting up gettext-base (0.19.7-2) ...
Setting up libicu55:armhf (55.1-7) ...
Setting up libxml2:armhf (2.9.3+dfsg1-1) ...
Setting up autotools-dev (20150820.1) ...
Setting up libffi6:armhf (3.2.1-4) ...
Setting up libglib2.0-0:armhf (2.46.2-3) ...
No schema files found: doing nothing.
Setting up libcroco3:armhf (0.6.11-1) ...
Setting up gettext (0.19.7-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
Setting up po-debconf (1.0.19) ...
Setting up libarchive-zip-perl (1.56-2) ...
Setting up libfile-stripnondeterminism-perl (0.016-1) ...
Setting up dh-strip-nondeterminism (0.016-1) ...
Setting up debhelper (9.20160306) ...
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Processing triggers for libc-bin (2.21-7) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 3.19.0-trunk-armmp armhf (armv7l)
Toolchain package versions: binutils_2.26-3 dpkg-dev_1.18.4 g++-5_5.3.1-8+rpi1 gcc-5_5.3.1-8+rpi1 libc6-dev_2.21-7 libstdc++-4.9-dev_4.9.3-10 libstdc++-5-dev_5.3.1-8+rpi1 libstdc++6_5.3.1-8+rpi1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch
Package versions: acl_2.2.52-3 adduser_3.113+nmu3 apt_1.2.3 autotools-dev_20150820.1 base-files_9.5+rpi1 base-passwd_3.5.39 bash_4.3-14 binutils_2.26-3 bsdmainutils_9.0.6 bsdutils_1:2.27.1-3 build-essential_11.7 bzip2_1.0.6-8 coreutils_8.24-1 cpio_2.11+dfsg-4.1 cpp_4:5.3.1-1+rpi1 cpp-5_5.3.1-8+rpi1 dash_0.5.8-2.1 debconf_1.5.58 debfoster_2.7-2 debhelper_9.20160306 debianutils_4.7 dh-strip-nondeterminism_0.016-1 diffutils_1:3.3-3 dmsetup_2:1.02.115-2 dpkg_1.18.4 dpkg-dev_1.18.4 e2fslibs_1.42.13-1 e2fsprogs_1.42.13-1 fakeroot_1.20.2-1 file_1:5.25-2 findutils_4.6.0+git+20160126-2 g++_4:5.3.1-1+rpi1 g++-5_5.3.1-8+rpi1 gcc_4:5.3.1-1+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.3-10 gcc-5_5.3.1-8+rpi1 gcc-5-base_5.3.1-8+rpi1 gettext_0.19.7-2 gettext-base_0.19.7-2 gnupg_1.4.20-1 gpgv_1.4.20-1 grep_2.22-1 groff-base_1.22.3-7 gzip_1.6-4 hostname_3.16 init_1.24 init-system-helpers_1.24 initramfs-tools_0.120 initscripts_2.88dsf-59.2 insserv_1.14.0-5.2 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-7+rpi1 kmod_22-1 libacl1_2.2.52-3 libapparmor1_2.10-3 libapt-pkg4.12_1.0.9.10 libapt-pkg5.0_1.2.3 libarchive-zip-perl_1.56-2 libasan1_4.9.3-10 libasan2_5.3.1-8+rpi1 libatomic1_5.3.1-8+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1 libaudit1_1:2.4.5-1 libblkid1_2.27.1-3 libbz2-1.0_1.0.6-8 libc-bin_2.21-7 libc-dev-bin_2.21-7 libc6_2.21-7 libc6-dev_2.21-7 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.3.1-8+rpi1 libcomerr2_1.42.13-1 libcroco3_0.6.11-1 libcryptsetup4_2:1.7.0-2 libdb5.3_5.3.28-11 libdbus-1-3_1.10.6-1 libdebconfclient0_0.204 libdevmapper1.02.1_2:1.02.115-2 libdpkg-perl_1.18.4 libdrm2_2.4.66-2 libfakeroot_1.20.2-1 libfdisk1_2.27.1-3 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.016-1 libgc1c2_1:7.4.2-7.3 libgcc-4.9-dev_4.9.3-10 libgcc-5-dev_5.3.1-8+rpi1 libgcc1_1:5.3.1-8+rpi1 libgcrypt20_1.6.4-5 libgdbm3_1.8.3-13.1 libglib2.0-0_2.46.2-3 libgmp10_2:6.1.0+dfsg-2 libgomp1_5.3.1-8+rpi1 libgpg-error0_1.21-1 libicu55_55.1-7 libisl15_0.16.1-1 libklibc_2.0.4-7+rpi1 libkmod2_22-1 liblz4-1_0.0~r131-1 liblzma5_5.1.1alpha+20120614-2.1 libmagic1_1:5.25-2 libmount1_2.27.1-3 libmpc3_1.0.3-1 libmpfr4_3.1.3-2 libncurses5_6.0+20151024-2 libncursesw5_6.0+20151024-2 libpam-modules_1.1.8-3.2 libpam-modules-bin_1.1.8-3.2 libpam-runtime_1.1.8-3.2 libpam0g_1.1.8-3.2 libpcre3_2:8.38-1 libperl5.22_5.22.1-5 libpipeline1_1.4.1-2 libpng12-0_1.2.54-1 libprocps3_2:3.3.9-9 libprocps5_2:3.3.11-3 libreadline6_6.3-8+b3 libseccomp2_2.2.3-2 libselinux1_2.4-3 libsemanage-common_2.4-3 libsemanage1_2.4-3 libsepol1_2.4-2 libslang2_2.3.0-2+b1 libsmartcols1_2.27.1-3 libss2_1.42.13-1 libstdc++-4.9-dev_4.9.3-10 libstdc++-5-dev_5.3.1-8+rpi1 libstdc++6_5.3.1-8+rpi1 libsystemd0_228-6 libtimedate-perl_2.3000-2 libtinfo5_6.0+20151024-2 libubsan0_5.3.1-8+rpi1 libudev1_228-6 libunistring0_0.9.3-5.2 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-3 libxml2_2.9.3+dfsg1-1 linux-libc-dev_3.18.5-1~exp1+rpi19+stretch login_1:4.2-3.1 lsb-base_9.20160110+rpi1 make_4.1-5 makedev_2.3.1-93 man-db_2.7.5-1 manpages_4.04-1 mawk_1.3.3-17 mount_2.27.1-3 multiarch-support_2.21-7 nano_2.5.1-1 ncurses-base_6.0+20151024-2 ncurses-bin_6.0+20151024-2 passwd_1:4.2-3.1 patch_2.7.5-1 perl_5.22.1-5 perl-base_5.22.1-5 perl-modules-5.22_5.22.1-7 po-debconf_1.0.19 procps_2:3.3.11-3 raspbian-archive-keyring_20120528.2 readline-common_6.3-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-tantan-dummy_0.invalid.0 sed_4.2.2-6.1 sensible-utils_0.0.9 startpar_0.59-3 systemd_228-6 systemd-sysv_228-6 sysv-rc_2.88dsf-59.2 sysvinit-utils_2.88dsf-59.2 tar_1.28-2.1 tzdata_2016a-1 udev_228-6 util-linux_2.27.1-3 xz-utils_5.1.1alpha+20120614-2.1 zlib1g_1:1.2.8.dfsg-2+b1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
gpgv: Signature made Sun Mar 13 00:07:52 2016 UTC using RSA key ID F09F4872
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./tantan_13-4.dsc
dpkg-source: info: extracting tantan in tantan-13
dpkg-source: info: unpacking tantan_13.orig.tar.gz
dpkg-source: info: unpacking tantan_13-4.debian.tar.xz
dpkg-source: info: applying buildflags.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=stretch-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=stretch-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=stretch-staging-armhf-sbuild-93d8d9b3-6fc0-4587-aa39-e88baf00b8e3
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: source package tantan
dpkg-buildpackage: source version 13-4
dpkg-buildpackage: source distribution unstable
dpkg-source --before-build tantan-13
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
make -j1 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
rm -f tantan CA_code/lambda_calculator.o
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules build-arch
dh build-arch
dh_testdir -a
dh_update_autotools_config -a
dh_auto_configure -a
dh_auto_build -a
make -j1
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>/src'
if test -e ../.hg; \
then echo \"`hg id -n`\" | cmp -s version.hh - || echo \"`hg id -n`\" > version.hh ; \
fi
cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -c -o CA_code/lambda_calculator.o CA_code/lambda_calculator.c
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fPIE -fstack-protector-strong -Wformat -Werror=format-security -fPIE -pie -Wl,-z,relro -Wl,-z,now -o tantan mcf_alphabet.cc mcf_fasta_sequence.cc mcf_score_matrix.cc mcf_score_matrix_probs.cc mcf_tantan_options.cc mcf_util.cc tantan.cc tantan_app.cc CA_code/lambda_calculator.o
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
make prefix=/<<PKGBUILDDIR>>/debian/tantan/usr install
make[2]: Entering directory '/<<PKGBUILDDIR>>'
make[3]: Entering directory '/<<PKGBUILDDIR>>/src'
if test -e ../.hg; \
then echo \"`hg id -n`\" | cmp -s version.hh - || echo \"`hg id -n`\" > version.hh ; \
fi
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src'
mkdir -p /<<PKGBUILDDIR>>/debian/tantan/usr/bin
cp src/tantan /<<PKGBUILDDIR>>/debian/tantan/usr/bin
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'tantan-dbgsym' in '../tantan-dbgsym_13-4_armhf.deb'.
dpkg-deb: building package 'tantan' in '../tantan_13-4_armhf.deb'.
dpkg-genchanges -B -mRaspbian wandboard test autobuilder <root@raspbian.org> >../tantan_13-4_armhf.changes
dpkg-genchanges: warning: package tantan-dbgsym listed in files list but not in control info
dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build tantan-13
dpkg-buildpackage: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20160318-1232
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
tantan_13-4_armhf.changes:
--------------------------
Format: 1.8
Date: Sun, 13 Mar 2016 00:04:54 +0000
Source: tantan
Binary: tantan
Architecture: armhf
Version: 13-4
Distribution: stretch-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Sascha Steinbiss <sascha@steinbiss.name>
Description:
tantan - low complexity and tandem repeat masker for biosequences
Changes:
tantan (13-4) unstable; urgency=medium
.
* Use stable compilation order for reproducibility.
* Add full hardening support.
Checksums-Sha1:
5f5a84a30f71ac5b1874df65e472dabebcb2b68f 270442 tantan-dbgsym_13-4_armhf.deb
6043d68f847f62e7ab968581f7666aa56bcd3ad5 32098 tantan_13-4_armhf.deb
Checksums-Sha256:
a56a9c962abf12ad88b259422018063bc6ae555c9bf4aad412cacb985cf72725 270442 tantan-dbgsym_13-4_armhf.deb
cb8a793a10ab2bdb027b02ad2add3e3f7b87d15a06eaf9b719e19fd1edc5a1c2 32098 tantan_13-4_armhf.deb
Files:
73feab858dfb9f749700870af2b57d0a 270442 debug extra tantan-dbgsym_13-4_armhf.deb
6c601da1b89d3889a3af3f3a2679cd48 32098 science optional tantan_13-4_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
tantan-dbgsym_13-4_armhf.deb
----------------------------
new debian package, version 2.0.
size 270442 bytes: control archive=481 bytes.
394 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: tantan-dbgsym
Source: tantan
Version: 13-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 291
Depends: tantan (= 13-4)
Section: debug
Priority: extra
Homepage: http://www.cbrc.jp/tantan/
Description: Debug symbols for tantan
Auto-Built-Package: debug-symbols
Build-Ids: d8efcd567d588fb5d2d827cbcc82e7d6e4de522c
drwxr-xr-x root/root 0 2016-03-18 12:32 ./
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/lib/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/lib/debug/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/lib/debug/.build-id/d8/
-rw-r--r-- root/root 287404 2016-03-18 12:32 ./usr/lib/debug/.build-id/d8/efcd567d588fb5d2d827cbcc82e7d6e4de522c.debug
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/doc/
lrwxrwxrwx root/root 0 2016-03-18 12:32 ./usr/share/doc/tantan-dbgsym -> tantan
tantan_13-4_armhf.deb
---------------------
new debian package, version 2.0.
size 32098 bytes: control archive=762 bytes.
690 bytes, 15 lines control
322 bytes, 5 lines md5sums
Package: tantan
Version: 13-4
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 84
Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.0), libstdc++6 (>= 5.2)
Section: science
Priority: optional
Homepage: http://www.cbrc.jp/tantan/
Description: low complexity and tandem repeat masker for biosequences
tantan is a tool to mask simple regions (low complexity and short-period tandem
repeats) in DNA, RNA, and protein sequences. The aim of tantan is to prevent
false predictions when searching for homologous regions between two sequences.
Simple repeats often align strongly to each other, causing false homology
predictions.
drwxr-xr-x root/root 0 2016-03-18 12:32 ./
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/bin/
-rwxr-xr-x root/root 71180 2016-03-18 12:32 ./usr/bin/tantan
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/doc/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/doc/tantan/
-rw-r--r-- root/root 409 2016-03-13 00:04 ./usr/share/doc/tantan/changelog.Debian.gz
-rw-r--r-- root/root 914 2012-10-16 13:11 ./usr/share/doc/tantan/changelog.gz
-rw-r--r-- root/root 1212 2016-02-15 23:50 ./usr/share/doc/tantan/copyright
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/man/
drwxr-xr-x root/root 0 2016-03-18 12:32 ./usr/share/man/man1/
-rw-r--r-- root/root 722 2016-03-18 12:32 ./usr/share/man/man1/tantan.1.gz
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 2060
Build-Time: 78
Distribution: stretch-staging
Host Architecture: armhf
Install-Time: 142
Job: tantan_13-4
Machine Architecture: armhf
Package: tantan
Package-Time: 262
Source-Version: 13-4
Space: 2060
Status: successful
Version: 13-4
--------------------------------------------------------------------------------
Finished at 20160318-1232
Build needed 00:04:22, 2060k disc space