sumalibs →
1.0.35-1 →
armhf → 2020-04-14 07:57:10
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-03
+==============================================================================+
| sumalibs 1.0.35-1 (armhf) Tue, 14 Apr 2020 07:52:34 +0000 |
+==============================================================================+
Package: sumalibs
Version: 1.0.35-1
Source Version: 1.0.35-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-c88a1f3a-996e-438f-bc4d-3007481dc984' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.4 MB in 24s (1002 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'sumalibs' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/sumalibs.git
Please use:
git clone https://salsa.debian.org/med-team/sumalibs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 62.2 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main sumalibs 1.0.35-1 (dsc) [1960 B]
Get:2 http://172.17.0.1/private bullseye-staging/main sumalibs 1.0.35-1 (tar) [52.1 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main sumalibs 1.0.35-1 (diff) [8204 B]
Fetched 62.2 kB in 0s (390 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/sumalibs-72VoJ2/sumalibs-1.0.35' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/sumalibs-72VoJ2' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-p004gH/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-p004gH/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-p004gH/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Packages [433 B]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 3 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 12225 files and directories currently installed.)
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Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 12)
Filtered Build-Depends: debhelper-compat (= 12)
dpkg-deb: building package 'sbuild-build-depends-sumalibs-dummy' in '/<<BUILDDIR>>/resolver-p004gH/apt_archive/sbuild-build-depends-sumalibs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-sumalibs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Sources [489 B]
Get:5 copy:/<<BUILDDIR>>/resolver-p004gH/apt_archive ./ Packages [569 B]
Fetched 2391 B in 1s (3071 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install sumalibs build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3
libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0
libicu63 libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libsub-override-perl libtinfo5 libtool libuchardet0 libxml2 m4 man-db
po-debconf sensible-utils
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less
www-browser libmail-box-perl
Recommended packages:
curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info
xdg-user-dirs libltdl-dev libmail-sendmail-perl
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils debhelper
dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base
groff-base intltool-debian libarchive-zip-perl libbsd0 libcroco3
libdebhelper-perl libelf1 libfile-stripnondeterminism-perl libglib2.0-0
libicu63 libmagic-mgc libmagic1 libpipeline1 libsigsegv2
libsub-override-perl libtinfo5 libtool libuchardet0 libxml2 m4 man-db
po-debconf sbuild-build-depends-sumalibs-dummy sensible-utils
0 upgraded, 36 newly installed, 0 to remove and 3 not upgraded.
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Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.10 [184 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.7.0-1 [23.8 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.7.0-1 [14.8 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.1-1 [1157 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-4 [592 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.10 [1003 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libtool (2.4.6-14) ...
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Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up gettext (0.19.8.1-10) ...
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Setting up intltool-debian (0.35.0+20060710.5) ...
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Processing triggers for libc-bin (2.30-4+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.34-5+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-10+rpi1 gcc-9_9.3.0-10+rpi1 libc6-dev_2.30-4+rpi1 libstdc++-9-dev_9.3.0-10+rpi1 libstdc++6_10-20200324-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.0.2 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-5+rpi1 binutils-arm-linux-gnueabihf_2.34-5+rpi1 binutils-common_2.34-5+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-10+rpi1 dash_0.5.10.2-7 debconf_1.5.73 debhelper_12.10 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.7.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-10+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10-20200324-1+rpi1 gcc-6-base_6.5.0-1+rpi3 gcc-7-base_7.5.0-5 gcc-8-base_8.4.0-1+rpi1 gcc-9_9.3.0-10+rpi1 gcc-9-base_9.3.0-10+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapt-pkg6.0_2.0.2 libarchive-zip-perl_1.68-1 libasan5_9.3.0-10+rpi1 libassuan0_2.5.3-7 libatomic1_10-20200324-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-5+rpi1 libblkid1_2.34-0.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-4+rpi1 libc-dev-bin_2.30-4+rpi1 libc6_2.30-4+rpi1 libc6-dev_2.30-4+rpi1 libcap-ng0_0.7.9-2.1+b1 libcc1-0_10-20200324-1+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-5+rpi1 libctf0_2.34-5+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.10 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.7.0-1 libgcc-9-dev_9.3.0-10+rpi1 libgcc-s1_10-20200324-1+rpi1 libgcc1_1:10-20200324-1+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.1-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10-20200324-1+rpi1 libgpg-error0_1.37-1 libhogweed5_3.5.1+really3.5.1-2 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.49+dfsg-2 libldap-common_2.4.49+dfsg-3 liblocale-gettext-perl_1.07-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libreadline8_8.0-4 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsqlite3-0_3.31.1-4 libss2_1.45.6-1 libstdc++-9-dev_9.3.0-10+rpi1 libstdc++6_10-20200324-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_244.3-1+rpi1 libtasn1-6_4.16.0-2 libtext-charwidth-perl_0.04-10 libtext-iconv-perl_1.7-7 libtinfo5_6.2-1 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10-20200324-1+rpi1 libuchardet0_0.0.6-3 libudev1_244.3-1+rpi1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml2_2.9.10+dfsg-4 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.30_5.30.0-9 pinentry-curses_1.1.0-3 po-debconf_1.0.21 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-sumalibs-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2019c-3 util-linux_2.34-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Apr 9 11:24:35 2020 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./sumalibs_1.0.35-1.dsc
dpkg-source: info: extracting sumalibs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking sumalibs_1.0.35.orig.tar.gz
dpkg-source: info: unpacking sumalibs_1.0.35-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_makefile.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=root
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-c88a1f3a-996e-438f-bc4d-3007481dc984
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package sumalibs
dpkg-buildpackage: info: source version 1.0.35-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_auto_clean
make -j4 clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -rf libfasta/fasta_header_parser.o libfasta/fasta_seq_writer.o libfasta/fasta_header_handler.o libfasta/header_mem_handler.o libfasta/sequence.o libfile/fileHandling.o liblcs/sse_banded_LCS_alignment.o liblcs/upperband.o libutils/utilities.o libutils/debug.o libsuma.a
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
dh_auto_build -a
make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
gcc -O3 -w -c -o libfasta/fasta_header_parser.o libfasta/fasta_header_parser.c
gcc -O3 -w -c -o libfasta/fasta_seq_writer.o libfasta/fasta_seq_writer.c
gcc -O3 -w -c -o libfasta/fasta_header_handler.o libfasta/fasta_header_handler.c
gcc -O3 -w -c -o libfasta/header_mem_handler.o libfasta/header_mem_handler.c
gcc -O3 -w -c -o libfasta/sequence.o libfasta/sequence.c
gcc -O3 -w -c -o libfile/fileHandling.o libfile/fileHandling.c
gcc -O3 -w -c -o liblcs/sse_banded_LCS_alignment.o liblcs/sse_banded_LCS_alignment.c
gcc -O3 -w -c -o liblcs/upperband.o liblcs/upperband.c
gcc -O3 -w -c -o libutils/utilities.o libutils/utilities.c
gcc -O3 -w -c -o libutils/debug.o libutils/debug.c
ar -cr libsuma.a libfasta/fasta_header_parser.o libfasta/fasta_seq_writer.o libfasta/fasta_header_handler.o libfasta/header_mem_handler.o libfasta/sequence.o libfile/fileHandling.o liblcs/sse_banded_LCS_alignment.o liblcs/upperband.o libutils/utilities.o libutils/debug.o
ranlib libsuma.a
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -a
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/libsuma-dev AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>'
install -d /<<PKGBUILDDIR>>/debian/libsuma-dev/usr/lib/
install -m 644 libsuma.a /<<PKGBUILDDIR>>/debian/libsuma-dev/usr/lib/
install -d /<<PKGBUILDDIR>>/debian/libsuma-dev/usr/include/
for lib in libfasta liblcs libsse libutils libfile ; do \
install -d /<<PKGBUILDDIR>>/debian/libsuma-dev/usr/include/$lib ; \
cp $lib/*.h /<<PKGBUILDDIR>>/debian/libsuma-dev/usr/include/$lib ; \
done
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
mkdir debian/libsuma-dev/usr/lib/arm-linux-gnueabihf
mv debian/libsuma-dev/usr/lib/*.a debian/libsuma-dev/usr/lib/arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_installdocs -a
dh_installchangelogs -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libsuma-dev: substitution variable ${shlibs:Depends} used, but is not defined
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libsuma-dev' in '../libsuma-dev_1.0.35-1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../sumalibs_1.0.35-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-04-14T07:57:04Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
sumalibs_1.0.35-1_armhf.changes:
--------------------------------
Format: 1.8
Date: Thu, 09 Apr 2020 13:15:04 +0200
Source: sumalibs
Binary: libsuma-dev
Architecture: armhf
Version: 1.0.35-1
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libsuma-dev - libraries for sumatra and sumaclust
Changes:
sumalibs (1.0.35-1) unstable; urgency=medium
.
* New upstream version
* Remove trailing whitespace in debian/copyright (routine-update)
Checksums-Sha1:
838a5b98291fb318ead1519e405a0fa54524bbdb 37340 libsuma-dev_1.0.35-1_armhf.deb
4a1a6e9a608907f532c8f3b01918040879631005 4418 sumalibs_1.0.35-1_armhf.buildinfo
Checksums-Sha256:
8b4f32794582e18a07b4fd94435d93a5c9e8640879b0dcb4e9f82db2e5dce6cd 37340 libsuma-dev_1.0.35-1_armhf.deb
ee39b1666ecccbf755ff7b78d336971d0b5898296dc6e92eda234620156ba044 4418 sumalibs_1.0.35-1_armhf.buildinfo
Files:
f527b2dd55466679416b5f865ae2bec6 37340 libdevel optional libsuma-dev_1.0.35-1_armhf.deb
c4b015205522146fa964a4fd1fa479a8 4418 science optional sumalibs_1.0.35-1_armhf.buildinfo
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libsuma-dev_1.0.35-1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 37340 bytes: control archive=1136 bytes.
524 bytes, 13 lines control
1198 bytes, 17 lines md5sums
Package: libsuma-dev
Source: sumalibs
Version: 1.0.35-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 139
Section: libdevel
Priority: optional
Homepage: https://git.metabarcoding.org/obitools/sumalibs
Description: libraries for sumatra and sumaclust
Sumatra is a tool for fast and exact comparison and clustering of sequences
and sumaclust can be used for fast and exact clustering of genomic sequences.
Both tools are using this common library.
drwxr-xr-x root/root 0 2020-04-09 11:15 ./
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/include/
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/include/libfasta/
-rw-r--r-- root/root 616 2020-04-09 11:15 ./usr/include/libfasta/fasta_header_handler.h
-rw-r--r-- root/root 188 2020-04-09 11:15 ./usr/include/libfasta/fasta_header_parser.h
-rw-r--r-- root/root 366 2020-04-09 11:15 ./usr/include/libfasta/fasta_seq_writer.h
-rw-r--r-- root/root 508 2020-04-09 11:15 ./usr/include/libfasta/header_mem_handler.h
-rw-r--r-- root/root 2885 2020-04-09 11:15 ./usr/include/libfasta/sequence.h
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/include/libfile/
-rw-r--r-- root/root 511 2020-04-09 11:15 ./usr/include/libfile/fileHandling.h
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/include/liblcs/
-rw-r--r-- root/root 741 2020-04-09 11:15 ./usr/include/liblcs/_lcs.h
-rw-r--r-- root/root 13790 2020-04-09 11:15 ./usr/include/liblcs/_lcs_fast.h
-rw-r--r-- root/root 233 2020-04-09 11:15 ./usr/include/liblcs/banded_LCS_alignment.h
-rw-r--r-- root/root 1292 2020-04-09 11:15 ./usr/include/liblcs/sse_banded_LCS_alignment.h
-rw-r--r-- root/root 826 2020-04-09 11:15 ./usr/include/liblcs/upperband.h
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/include/libsse/
-rw-r--r-- root/root 14989 2020-04-09 11:15 ./usr/include/libsse/_sse.h
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/include/libutils/
-rw-r--r-- root/root 378 2020-04-09 11:15 ./usr/include/libutils/debug.h
-rw-r--r-- root/root 1429 2020-04-09 11:15 ./usr/include/libutils/utilities.h
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/lib/
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/lib/arm-linux-gnueabihf/
-rw-r--r-- root/root 58046 2020-04-09 11:15 ./usr/lib/arm-linux-gnueabihf/libsuma.a
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/share/
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/share/doc/
drwxr-xr-x root/root 0 2020-04-09 11:15 ./usr/share/doc/libsuma-dev/
-rw-r--r-- root/root 241 2020-04-09 11:15 ./usr/share/doc/libsuma-dev/changelog.Debian.gz
-rw-r--r-- root/root 22108 2020-04-09 11:15 ./usr/share/doc/libsuma-dev/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 736
Build-Time: 34
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 188
Job: sumalibs_1.0.35-1
Machine Architecture: armhf
Package: sumalibs
Package-Time: 270
Source-Version: 1.0.35-1
Space: 736
Status: successful
Version: 1.0.35-1
--------------------------------------------------------------------------------
Finished at 2020-04-14T07:57:04Z
Build needed 00:04:30, 736k disc space