Raspbian Package Auto-Building

Build log for spades (3.15.4+dfsg-1) on armhf

spades3.15.4+dfsg-1armhf → 2022-04-15 17:02:31

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01

+==============================================================================+
| spades 3.15.4+dfsg-1 (armhf)                 Fri, 15 Apr 2022 16:49:51 +0000 |
+==============================================================================+

Package: spades
Version: 3.15.4+dfsg-1
Source Version: 3.15.4+dfsg-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-42ee5848-70ac-4ace-8f78-fd597dafb6d5' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [12.9 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [13.9 MB]
Fetched 26.8 MB in 12s (2197 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'spades' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/spades.git
Please use:
git clone https://salsa.debian.org/med-team/spades.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 9932 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main spades 3.15.4+dfsg-1 (dsc) [2350 B]
Get:2 http://172.17.4.1/private bookworm-staging/main spades 3.15.4+dfsg-1 (tar) [9901 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main spades 3.15.4+dfsg-1 (diff) [29.1 kB]
Fetched 9932 kB in 1s (7586 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/spades-xVzuHf/spades-3.15.4+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/spades-xVzuHf' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-huKqBq/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-huKqBq/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-huKqBq/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Packages [434 B]
Fetched 2110 B in 1s (2932 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  netbase sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 32 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (55.0 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12608 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: debhelper-compat (= 13), dh-python, cmake, python3-all, zlib1g-dev, libbz2-dev, libbam-dev, libbamtools-dev, libhts-dev, libnlopt-dev, libnlopt-cxx-dev, libssw-dev, llvm-dev, python3-yaml, python3-joblib, asciidoctor, bwa, libbwa-dev, lynx
Filtered Build-Depends: debhelper-compat (= 13), dh-python, cmake, python3-all, zlib1g-dev, libbz2-dev, libbam-dev, libbamtools-dev, libhts-dev, libnlopt-dev, libnlopt-cxx-dev, libssw-dev, llvm-dev, python3-yaml, python3-joblib, asciidoctor, bwa, libbwa-dev, lynx
dpkg-deb: building package 'sbuild-build-depends-spades-dummy' in '/<<BUILDDIR>>/resolver-huKqBq/apt_archive/sbuild-build-depends-spades-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-spades-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Sources [588 B]
Get:5 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ Packages [673 B]
Fetched 2594 B in 1s (3882 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install spades build dependencies (apt-based resolver)
------------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  netbase
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  asciidoctor autoconf automake autopoint autotools-dev bsdextrautils bwa
  ca-certificates cmake cmake-data debhelper dh-autoreconf dh-elpa-helper
  dh-python dh-strip-nondeterminism dwz emacsen-common file gcc-12-base
  gettext gettext-base groff-base icu-devtools intltool-debian
  libarchive-zip-perl libarchive13 libbam-dev libbamtools-dev libbamtools2.5.1
  libbrotli1 libbsd0 libbwa-dev libbz2-dev libclang-cpp13 libcurl3-gnutls
  libcurl4 libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0
  libedit2 libelf1 libexpat1 libffi-dev libfile-stripnondeterminism-perl
  libhts-dev libhts3 libhtscodecs2 libicu-dev libicu67 libjsoncpp25 libllvm13
  liblzma-dev libmagic-mgc libmagic1 libmd0 libmpdec3 libncurses-dev
  libncurses6 libnghttp2-14 libnlopt-cxx-dev libnlopt-cxx0 libnlopt-dev
  libnlopt0 libpfm4 libpipeline1 libprocps8 libpsl5 libpython3-stdlib
  libpython3.10-minimal libpython3.10-stdlib libpython3.9-minimal
  libpython3.9-stdlib librhash0 librtmp1 libruby3.0 libsigsegv2 libssh2-1
  libssw-dev libssw0 libstdc++6 libsub-override-perl libtinfo-dev libtool
  libuchardet0 libuv1 libxml2 libxml2-dev libyaml-0-2 libz3-4 libz3-dev llvm
  llvm-13 llvm-13-dev llvm-13-linker-tools llvm-13-runtime llvm-13-tools
  llvm-dev llvm-runtime lynx lynx-common m4 man-db media-types openssl
  po-debconf procps python3 python3-all python3-distutils python3-joblib
  python3-lib2to3 python3-minimal python3-pkg-resources python3-pygments
  python3-yaml python3.10 python3.10-minimal python3.9 python3.9-minimal rake
  ruby ruby-asciidoctor ruby-net-telnet ruby-rubygems ruby-xmlrpc ruby3.0
  rubygems-integration zlib1g zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc samtools cmake-doc ninja-build
  cmake-format dh-make flit python3-build python3-tomli python3-installer
  gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libbamtools-doc
  libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev
  librtmp-dev libssh2-1-dev pkg-config icu-doc liblzma-doc ncurses-doc
  libtool-doc gfortran | fortran95-compiler gcj-jdk llvm-13-doc m4-doc
  apparmor less libmail-box-perl python3-doc python3-tk python3-venv
  python3-setuptools python-pygments-doc ttf-bitstream-vera python3.10-venv
  python3.10-doc binfmt-support python3.9-venv python3.9-doc ri ruby-dev
  bundler
Recommended packages:
  bzip2-doc libarchive-cpio-perl libgpm2 publicsuffix libltdl-dev
  binfmt-support mime-support libmail-sendmail-perl psmisc python3-numpy
  python3-pytest python3-simplejson python3-psutil zip fonts-lato libjs-jquery
The following NEW packages will be installed:
  asciidoctor autoconf automake autopoint autotools-dev bsdextrautils bwa
  ca-certificates cmake cmake-data debhelper dh-autoreconf dh-elpa-helper
  dh-python dh-strip-nondeterminism dwz emacsen-common file gcc-12-base
  gettext gettext-base groff-base icu-devtools intltool-debian
  libarchive-zip-perl libarchive13 libbam-dev libbamtools-dev libbamtools2.5.1
  libbrotli1 libbsd0 libbwa-dev libbz2-dev libclang-cpp13 libcurl3-gnutls
  libcurl4 libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0
  libedit2 libelf1 libexpat1 libffi-dev libfile-stripnondeterminism-perl
  libhts-dev libhts3 libhtscodecs2 libicu-dev libicu67 libjsoncpp25 libllvm13
  liblzma-dev libmagic-mgc libmagic1 libmd0 libmpdec3 libncurses-dev
  libncurses6 libnghttp2-14 libnlopt-cxx-dev libnlopt-cxx0 libnlopt-dev
  libnlopt0 libpfm4 libpipeline1 libprocps8 libpsl5 libpython3-stdlib
  libpython3.10-minimal libpython3.10-stdlib libpython3.9-minimal
  libpython3.9-stdlib librhash0 librtmp1 libruby3.0 libsigsegv2 libssh2-1
  libssw-dev libssw0 libsub-override-perl libtinfo-dev libtool libuchardet0
  libuv1 libxml2 libxml2-dev libyaml-0-2 libz3-4 libz3-dev llvm llvm-13
  llvm-13-dev llvm-13-linker-tools llvm-13-runtime llvm-13-tools llvm-dev
  llvm-runtime lynx lynx-common m4 man-db media-types openssl po-debconf
  procps python3 python3-all python3-distutils python3-joblib python3-lib2to3
  python3-minimal python3-pkg-resources python3-pygments python3-yaml
  python3.10 python3.10-minimal python3.9 python3.9-minimal rake ruby
  ruby-asciidoctor ruby-net-telnet ruby-rubygems ruby-xmlrpc ruby3.0
  rubygems-integration sbuild-build-depends-spades-dummy zlib1g-dev
The following packages will be upgraded:
  libstdc++6 zlib1g
2 upgraded, 129 newly installed, 0 to remove and 30 not upgraded.
Need to get 139 MB of archives.
After this operation, 667 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-huKqBq/apt_archive ./ sbuild-build-depends-spades-dummy 0.invalid.0 [956 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf libpython3.9-minimal armhf 3.9.12-1+rpi1 [794 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.4.8-1 [84.1 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf zlib1g armhf 1:1.2.11.dfsg-4 [84.2 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf python3.9-minimal armhf 3.9.12-1+rpi1 [1595 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf python3-minimal armhf 3.9.8-1 [38.5 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf media-types all 7.1.0 [33.2 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12-20220319-1+rpi1 [207 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12-20220319-1+rpi1 [506 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf libmpdec3 armhf 2.5.1-2+rpi1 [73.5 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libpython3.9-stdlib armhf 3.9.12-1+rpi1 [1611 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf python3.9 armhf 3.9.12-1+rpi1 [492 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libpython3-stdlib armhf 3.9.8-1 [21.6 kB]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf python3 armhf 3.9.8-1 [38.1 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-minimal armhf 3.10.4-1 [811 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf python3.10-minimal armhf 3.10.4-1 [1633 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-8 [793 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.37.3-1 [136 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.5-1 [32.9 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.10.2-1 [1362 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf libncurses6 armhf 6.3-2 [79.6 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf libprocps8 armhf 2:3.3.17-7 [60.7 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf procps armhf 2:3.3.17-7 [475 kB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 1.1.1n-1 [816 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.41-2 [295 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.41-2 [119 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.41-2 [65.8 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-6 [171 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf rubygems-integration all 1.18 [6704 B]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf rake all 13.0.6-3 [83.9 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf ruby-net-telnet all 0.1.1-2 [12.5 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf ruby-xmlrpc all 0.3.2-1 [24.3 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-1 [28.9 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.6-1 [109 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf libedit2 armhf 3.1-20210910-1 [81.2 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libyaml-0-2 armhf 0.2.2-1 [40.0 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf libruby3.0 armhf 3.0.3-1 [5073 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf ruby3.0 armhf 3.0.3-1 [670 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf ruby-rubygems all 3.3.5-2 [289 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf ruby armhf 1:3.0+1 [12.1 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf ruby-asciidoctor all 2.0.16-2 [210 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf asciidoctor all 2.0.16-2 [87.6 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf libsigsegv2 armhf 2.14-1 [36.6 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.18-5 [186 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-2 [343 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-6 [510 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf bwa armhf 0.7.17-7 [196 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf libicu67 armhf 67.1-7 [8291 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.13+dfsg-1 [593 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf libarchive13 armhf 3.6.0-1 [306 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.43.0-1 [65.3 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3 [161 kB]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.82.0-2 [317 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf libjsoncpp25 armhf 1.9.5-4 [66.7 kB]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf librhash0 armhf 1.4.2-1 [141 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf libuv1 armhf 1.44.1-2+rpi1 [124 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf dh-elpa-helper all 2.0.10 [11.3 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf emacsen-common all 3.0.4 [19.3 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf cmake-data all 3.23.1-1 [1938 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf cmake armhf 3.23.1-1 [3572 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.6 [193 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-3 [526 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.0-1 [15.8 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.186-1 [174 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.14-1 [83.0 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-6 [1214 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.6 [1054 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf python3-lib2to3 all 3.9.12-1 [79.9 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf python3-distutils all 3.9.12-1 [146 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf dh-python all 5.20220403 [113 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf icu-devtools armhf 67.1-7 [172 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-4 [183 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf libbam-dev armhf 0.1.19+dfsg-5 [106 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf libbamtools2.5.1 armhf 2.5.1+dfsg-10+b1 [135 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf libbamtools-dev armhf 2.5.1+dfsg-10+b1 [178 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf libbwa-dev armhf 0.7.17-7 [150 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf libbz2-dev armhf 1.0.8-5 [26.8 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf libz3-4 armhf 4.8.12-1 [5758 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libllvm13 armhf 1:13.0.1-3+rpi1+b1 [17.9 MB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libclang-cpp13 armhf 1:13.0.1-3+rpi1+b1 [9070 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf libcurl3-gnutls armhf 7.82.0-2 [313 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf libcurl4-gnutls-dev armhf 7.82.0-2 [389 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.10-2 [55.4 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf libdeflate-dev armhf 1.10-2 [47.8 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf libffi-dev armhf 3.4.2-4 [61.7 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf libhtscodecs2 armhf 1.2.1-1 [52.7 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libhts3 armhf 1.13+ds-2 [339 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf liblzma-dev armhf 5.2.5-2 [219 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf libhts-dev armhf 1.13+ds-2 [4049 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf libicu-dev armhf 67.1-7 [9228 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf libncurses-dev armhf 6.3-2 [289 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf libnlopt0 armhf 2.7.1-3 [140 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libnlopt-dev armhf 2.7.1-3 [47.8 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libnlopt-cxx0 armhf 2.7.1-3 [158 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libnlopt-cxx-dev armhf 2.7.1-3 [14.6 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libpfm4 armhf 4.11.1+git32-gd0b85fb-1 [43.2 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libpython3.10-stdlib armhf 3.10.4-1 [1625 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libssw0 armhf 1.1-13 [21.0 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libssw-dev armhf 1.1-13 [24.0 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libtinfo-dev armhf 6.3-2 [924 B]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libxml2-dev armhf 2.9.13+dfsg-1 [657 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf libz3-dev armhf 4.8.12-1 [91.9 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf llvm-13-runtime armhf 1:13.0.1-3+rpi1+b1 [238 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf llvm-runtime armhf 1:13.0-54 [9048 B]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf llvm-13-linker-tools armhf 1:13.0.1-3+rpi1+b1 [1013 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf llvm-13 armhf 1:13.0.1-3+rpi1+b1 [9441 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf llvm armhf 1:13.0-54 [11.3 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf python3-pkg-resources all 59.6.0-1.2 [196 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf python3-pygments all 2.11.2+dfsg-2 [744 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf python3-yaml armhf 5.4.1-1 [118 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf llvm-13-tools armhf 1:13.0.1-3+rpi1+b1 [382 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf llvm-13-dev armhf 1:13.0.1-3+rpi1+b1 [31.3 MB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf llvm-dev armhf 1:13.0-54 [9288 B]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf lynx-common all 2.9.0dev.10-1 [1186 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf lynx armhf 2.9.0dev.10-1 [506 kB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf python3.10 armhf 3.10.4-1 [536 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf python3-all armhf 3.9.8-1 [1060 B]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf python3-joblib all 0.17.0-4 [213 kB]
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Setting up libllvm13:armhf (1:13.0.1-3+rpi1+b1) ...
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Setting up autoconf (2.71-2) ...
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Setting up libcurl4:armhf (7.82.0-2) ...
Setting up lynx (2.9.0dev.10-1) ...
update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode
Setting up python3.9 (3.9.12-1+rpi1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Setting up man-db (2.10.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up llvm-13-linker-tools (1:13.0.1-3+rpi1+b1) ...
Setting up dh-autoreconf (20) ...
Setting up libclang-cpp13 (1:13.0.1-3+rpi1+b1) ...
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Setting up llvm (1:13.0-54) ...
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Setting up llvm-13-dev (1:13.0.1-3+rpi1+b1) ...
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Setting up rake (13.0.6-3) ...
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Setting up ruby (1:3.0+1) ...
Setting up ruby-asciidoctor (2.0.16-2) ...
Setting up asciidoctor (2.0.16-2) ...
Setting up sbuild-build-depends-spades-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.33-7+rpi1) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.15.0-163-generic armhf (armv8l)
Toolchain package versions: binutils_2.38-3+rpi1 dpkg-dev_1.21.2+rpi1 g++-11_11.2.0-16+rpi1 gcc-11_11.2.0-16+rpi1 libc6-dev_2.33-7+rpi1 libstdc++-11-dev_11.2.0-16+rpi1 libstdc++6_12-20220319-1+rpi1 linux-libc-dev_5.16.14-1+rpi1
Package versions: adduser_3.120 apt_2.4.3 asciidoctor_2.0.16-2 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-6 autotools-dev_20220109.1 base-files_12.2+rpi1 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-3+rpi1 binutils-arm-linux-gnueabihf_2.38-3+rpi1 binutils-common_2.38-3+rpi1 bsdextrautils_2.37.3-1 bsdutils_1:2.37.3-1 build-essential_12.9 bwa_0.7.17-7 bzip2_1.0.8-5 ca-certificates_20211016 cmake_3.23.1-1 cmake-data_3.23.1-1 coreutils_8.32-4.1 cpp_4:11.2.0-2+rpi1 cpp-11_11.2.0-16+rpi1 dash_0.5.11+git20210903+057cd650a4ed-8 debconf_1.5.79 debhelper_13.6 debianutils_5.7-0.1 dh-autoreconf_20 dh-elpa-helper_2.0.10 dh-python_5.20220403 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dirmngr_2.2.27-3+b1 dpkg_1.21.2+rpi1 dpkg-dev_1.21.2+rpi1 dwz_0.14-1 e2fsprogs_1.46.5-2 emacsen-common_3.0.4 fakeroot_1.28-1 file_1:5.41-2 findutils_4.9.0-2 g++_4:11.2.0-2+rpi1 g++-11_11.2.0-16+rpi1 gcc_4:11.2.0-2+rpi1 gcc-11_11.2.0-16+rpi1 gcc-11-base_11.2.0-16+rpi1 gcc-12-base_12-20220319-1+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-6 gettext-base_0.21-6 gnupg_2.2.27-3 gnupg-l10n_2.2.27-3 gnupg-utils_2.2.27-3+b1 gpg_2.2.27-3+b1 gpg-agent_2.2.27-3+b1 gpg-wks-client_2.2.27-3+b1 gpg-wks-server_2.2.27-3+b1 gpgconf_2.2.27-3+b1 gpgsm_2.2.27-3+b1 gpgv_2.2.27-3+b1 grep_3.7-1 groff-base_1.22.4-8 gzip_1.10-4 hostname_3.23 icu-devtools_67.1-7 init-system-helpers_1.62 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libapt-pkg6.0_2.4.3 libarchive-zip-perl_1.68-1 libarchive13_3.6.0-1 libasan6_11.2.0-16+rpi1 libassuan0_2.5.5-1 libatomic1_11.2.0-16+rpi1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1 libaudit1_1:3.0.7-1+b1 libbam-dev_0.1.19+dfsg-5 libbamtools-dev_2.5.1+dfsg-10+b1 libbamtools2.5.1_2.5.1+dfsg-10+b1 libbinutils_2.38-3+rpi1 libblkid1_2.37.3-1 libbrotli1_1.0.9-2+b1 libbsd0_0.11.6-1 libbwa-dev_0.7.17-7 libbz2-1.0_1.0.8-5 libbz2-dev_1.0.8-5 libc-bin_2.33-7+rpi1 libc-dev-bin_2.33-7+rpi1 libc6_2.33-7+rpi1 libc6-dev_2.33-7+rpi1 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-16+rpi1 libclang-cpp13_1:13.0.1-3+rpi1+b1 libcom-err2_1.46.5-2 libcrypt-dev_1:4.4.27-1.1 libcrypt1_1:4.4.27-1.1 libctf-nobfd0_2.38-3+rpi1 libctf0_2.38-3+rpi1 libcurl3-gnutls_7.82.0-2 libcurl4_7.82.0-2 libcurl4-gnutls-dev_7.82.0-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.6 libdeflate-dev_1.10-2 libdeflate0_1.10-2 libdpkg-perl_1.21.2+rpi1 libedit2_3.1-20210910-1 libelf1_0.186-1 libexpat1_2.4.8-1 libext2fs2_1.46.5-2 libfakeroot_1.28-1 libffi-dev_3.4.2-4 libffi8_3.4.2-4 libfile-stripnondeterminism-perl_1.13.0-1 libgcc-11-dev_11.2.0-16+rpi1 libgcc-s1_11.2.0-16+rpi1 libgcrypt20_1.9.4-5 libgdbm-compat4_1.23-1 libgdbm6_1.23-1 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.3-4 libgomp1_11.2.0-16+rpi1 libgpg-error0_1.43-3 libgssapi-krb5-2_1.19.2-2+b1 libhogweed6_3.7.3-1 libhts-dev_1.13+ds-2 libhts3_1.13+ds-2 libhtscodecs2_1.2.1-1 libicu-dev_67.1-7 libicu67_67.1-7 libidn2-0_2.3.2-2 libisl23_0.24-2 libjsoncpp25_1.9.5-4 libk5crypto3_1.19.2-2+b1 libkeyutils1_1.6.1-3+rpi1 libkrb5-3_1.19.2-2+b1 libkrb5support0_1.19.2-2+b1 libksba8_1.6.0-2 libldap-2.5-0_2.5.11+dfsg-1+rpi1 libllvm13_1:13.0.1-3+rpi1+b1 liblz4-1_1.9.3-2 liblzma-dev_5.2.5-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmd0_1.0.4-1 libmount1_2.37.3-1 libmpc3_1.2.1-1 libmpdec3_2.5.1-2+rpi1 libmpfr6_4.1.0-3 libncurses-dev_6.3-2 libncurses6_6.3-2 libncursesw6_6.3-2 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnlopt-cxx-dev_2.7.1-3 libnlopt-cxx0_2.7.1-3 libnlopt-dev_2.7.1-3 libnlopt0_2.7.1-3 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-6 libpam-modules_1.4.0-11 libpam-modules-bin_1.4.0-11 libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.34_5.34.0-3 libpfm4_4.11.1+git32-gd0b85fb-1 libpipeline1_1.5.5-1 libprocps8_2:3.3.17-7 libpsl5_0.21.0-1.2 libpython3-stdlib_3.9.8-1 libpython3.10-minimal_3.10.4-1 libpython3.10-stdlib_3.10.4-1 libpython3.9-minimal_3.9.12-1+rpi1 libpython3.9-stdlib_3.9.12-1+rpi1 libreadline8_8.1.2-1 librhash0_1.4.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libruby3.0_3.0.3-1 libsasl2-2_2.1.28+dfsg-2+b1 libsasl2-modules-db_2.1.28+dfsg-2+b1 libseccomp2_2.5.3-2+rpi1 libselinux1_3.3-1 libsemanage-common_3.3-1 libsemanage2_3.3-1 libsepol1_3.1-1 libsepol2_3.3-1 libsigsegv2_2.14-1 libsmartcols1_2.37.3-1 libsqlite3-0_3.38.1-1 libss2_1.46.5-2 libssh2-1_1.10.0-3 libssl1.1_1.1.1n-1 libssw-dev_1.1-13 libssw0_1.1-13 libstdc++-11-dev_11.2.0-16+rpi1 libstdc++6_12-20220319-1+rpi1 libsub-override-perl_0.09-2 libsystemd0_250.4-1+rpi1 libtasn1-6_4.18.0-4 libtinfo-dev_6.3-2 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.7-3 libubsan1_11.2.0-16+rpi1 libuchardet0_0.0.7-1 libudev1_250.4-1+rpi1 libunistring2_1.0-1 libuuid1_2.37.3-1 libuv1_1.44.1-2+rpi1 libxml2_2.9.13+dfsg-1 libxml2-dev_2.9.13+dfsg-1 libxxhash0_0.8.1-1 libyaml-0-2_0.2.2-1 libz3-4_4.8.12-1 libz3-dev_4.8.12-1 libzstd1_1.4.9+dfsg-1+rpi1 linux-libc-dev_5.16.14-1+rpi1 llvm_1:13.0-54 llvm-13_1:13.0.1-3+rpi1+b1 llvm-13-dev_1:13.0.1-3+rpi1+b1 llvm-13-linker-tools_1:13.0.1-3+rpi1+b1 llvm-13-runtime_1:13.0.1-3+rpi1+b1 llvm-13-tools_1:13.0.1-3+rpi1+b1 llvm-dev_1:13.0-54 llvm-runtime_1:13.0-54 login_1:4.11.1+dfsg1-2 logsave_1.46.5-2 lsb-base_11.1.0+rpi1 lynx_2.9.0dev.10-1 lynx-common_2.9.0dev.10-1 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.2-1 mawk_1.3.4.20200120-3 media-types_7.1.0 mount_2.37.3-1 ncurses-base_6.3-2 ncurses-bin_6.3-2 netbase_6.3 openssl_1.1.1n-1 passwd_1:4.11.1+dfsg1-2 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.34_5.34.0-3 pinentry-curses_1.1.0-4 po-debconf_1.0.21+nmu1 procps_2:3.3.17-7 python3_3.9.8-1 python3-all_3.9.8-1 python3-distutils_3.9.12-1 python3-joblib_0.17.0-4 python3-lib2to3_3.9.12-1 python3-minimal_3.9.8-1 python3-pkg-resources_59.6.0-1.2 python3-pygments_2.11.2+dfsg-2 python3-yaml_5.4.1-1 python3.10_3.10.4-1 python3.10-minimal_3.10.4-1 python3.9_3.9.12-1+rpi1 python3.9-minimal_3.9.12-1+rpi1 rake_13.0.6-3 raspbian-archive-keyring_20120528.2 readline-common_8.1.2-1 rpcsvc-proto_1.4.2-4 ruby_1:3.0+1 ruby-asciidoctor_2.0.16-2 ruby-net-telnet_0.1.1-2 ruby-rubygems_3.3.5-2 ruby-xmlrpc_0.3.2-1 ruby3.0_3.0.3-1 rubygems-integration_1.18 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-spades-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 util-linux_2.37.3-1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-4 zlib1g-dev_1:1.2.11.dfsg-4

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.7MQ5pUS1/trustedkeys.kbx': General error
gpgv: Signature made Tue Apr 12 17:35:19 2022 UTC
gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv:                issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./spades_3.15.4+dfsg-1.dsc
dpkg-source: info: extracting spades in /<<BUILDDIR>>/spades-3.15.4+dfsg
dpkg-source: info: unpacking spades_3.15.4+dfsg.orig.tar.xz
dpkg-source: info: unpacking spades_3.15.4+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 0002_use_debian_packaged_python-joblib.patch
dpkg-source: info: applying 0003_accept-system-bwa.patch
dpkg-source: info: applying 0101_cmake_ignore_removed_python-yaml.patch
dpkg-source: info: applying 0102_cmake_ignore_removed_python-joblib.patch
dpkg-source: info: applying 0103_use-debian-packaged-bwa.patch
dpkg-source: info: applying 0114_use_debian_provided_libs.patch
dpkg-source: info: applying 0118_adjust_spades_home_again.patch
dpkg-source: info: applying fix-bool-cast
dpkg-source: info: applying python3.patch
dpkg-source: info: applying yaml_load.patch
dpkg-source: info: applying debuginfo.patch
dpkg-source: info: applying debian_bwa_zlib.patch
dpkg-source: info: applying workdir_for_test.patch
dpkg-source: info: applying disable_local_convertutf.patch
dpkg-source: info: applying fix-sigill-on-non-popcnt-cpus.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-42ee5848-70ac-4ace-8f78-fd597dafb6d5
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package spades
dpkg-buildpackage: info: source version 3.15.4+dfsg-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean --with python3 --sourcedirectory=assembler/src --buildsystem=cmake
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
dh_auto_clean
find . -name "*.pyc" -delete
rm -rf /<<BUILDDIR>>/spades-3.15.4+dfsg/debian/man_src/*.html /<<BUILDDIR>>/spades-3.15.4+dfsg/debian/man_src/*.?
rm -rf /<<BUILDDIR>>/spades-3.15.4+dfsg/debian/man
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
   dh_autoreconf_clean -O--sourcedirectory=assembler/src -O--buildsystem=cmake
   debian/rules override_dh_clean
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
dh_clean -X.orig
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
 debian/rules binary-arch
dh binary-arch --with python3 --sourcedirectory=assembler/src --buildsystem=cmake
   dh_update_autotools_config -a -O--sourcedirectory=assembler/src -O--buildsystem=cmake
   dh_autoreconf -a -O--sourcedirectory=assembler/src -O--buildsystem=cmake
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
dh_auto_configure -- -DBoost_NO_BOOST_CMAKE=TRUE
	cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DBoost_NO_BOOST_CMAKE=TRUE ../assembler/src
CMake Warning (dev) in CMakeLists.txt:
  No project() command is present.  The top-level CMakeLists.txt file must
  contain a literal, direct call to the project() command.  Add a line of
  code such as

    project(ProjectName)

  near the top of the file, but after cmake_minimum_required().

  CMake is pretending there is a "project(Project)" command on the first
  line.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- The C compiler identification is GNU 11.2.0
-- The CXX compiler identification is GNU 11.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11") 
-- Found BZip2: /usr/lib/arm-linux-gnueabihf/libbz2.so (found version "1.0.8") 
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Looking for wsyncup in /usr/lib/arm-linux-gnueabihf/libncurses.so
-- Looking for wsyncup in /usr/lib/arm-linux-gnueabihf/libncurses.so - found
-- Looking for wsyncup in /usr/lib/arm-linux-gnueabihf/libcurses.so
-- Looking for wsyncup in /usr/lib/arm-linux-gnueabihf/libcurses.so - found
-- Found Boost: /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include (found version "1.63.0")  
Making Release Configuration...
Building SPAdes from N/A, sha: N/A
-- Override standard malloc (MI_OVERRIDE=ON)
-- Enable abort() calls on memory allocation failure (MI_XMALLOC=ON)
-- Enable printing of error and warning messages by default (MI_SHOW_ERRORS=ON)
-- Use the C++ compiler to compile (MI_USE_CXX=ON)
-- 
-- Library base name: mimalloc-none
-- Build type       : none
-- Compiler         : /usr/bin/c++
-- Install directory: /usr/lib/mimalloc-1.6
-- Build targets    : object
-- 
-- Looking for open
-- Looking for open - found
-- Looking for execinfo.h
-- Looking for execinfo.h - found
-- Looking for signal.h
-- Looking for signal.h - found
-- Looking for sys/stat.h
-- Looking for sys/stat.h - found
-- Looking for cxxabi.h
-- Looking for cxxabi.h - not found
-- Looking for dlfcn.h
-- Looking for dlfcn.h - found
-- Looking for mach/mach.h
-- Looking for mach/mach.h - not found
-- Looking for link.h
-- Looking for link.h - found
-- Looking for unistd.h
-- Looking for unistd.h - found
-- Looking for sys/mman.h
-- Looking for sys/mman.h - found
-- Looking for fcntl.h
-- Looking for fcntl.h - found
-- Looking for malloc/malloc.h
-- Looking for malloc/malloc.h - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for sys/time.h
-- Looking for sys/time.h - found
-- Looking for sys/resource.h
-- Looking for sys/resource.h - found
-- Looking for backtrace
-- Looking for backtrace - found
-- backtrace facility detected in default set of libraries
-- Found Backtrace: /usr/include  
-- Looking for futimens
-- Looking for futimens - found
-- Looking for futimes
-- Looking for futimes - found
-- Looking for getrusage
-- Looking for getrusage - found
-- Looking for getpagesize
-- Looking for getpagesize - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Looking for mallinfo
-- Looking for mallinfo - found
-- Looking for mallctl
-- Looking for mallctl - not found
-- Looking for malloc_zone_statistics
-- Looking for malloc_zone_statistics - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Looking for pthread_getspecific in pthread
-- Looking for pthread_getspecific in pthread - found
-- Looking for pthread_rwlock_init in pthread
-- Looking for pthread_rwlock_init in pthread - found
-- Looking for pthread_mutex_lock in pthread
-- Looking for pthread_mutex_lock in pthread - found
-- Looking for dlopen in dl
-- Looking for dlopen in dl - found
-- Looking for clock_gettime in rt
-- Looking for clock_gettime in rt - found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Found LibXml2: /usr/lib/arm-linux-gnueabihf/libxml2.so (found version "2.9.13") 
-- Looking for include file endian.h
-- Looking for include file endian.h - found
-- Looking for include file inttypes.h
-- Looking for include file inttypes.h - found
-- Looking for include file stdint.h
-- Looking for include file stdint.h - found
-- Looking for include file strings.h
-- Looking for include file strings.h - found
-- Looking for include file sys/types.h
-- Looking for include file sys/types.h - found
-- Looking for include file sys/param.h
-- Looking for include file sys/param.h - found
-- Looking for include file sys/sysctl.h
-- Looking for include file sys/sysctl.h - not found
-- Looking for include file emmintrin.h
-- Looking for include file emmintrin.h - not found
-- Looking for include file pmmintrin.h
-- Looking for include file pmmintrin.h - not found
-- Looking for include file xmmintrin.h
-- Looking for include file xmmintrin.h - not found
-- Looking for chmod
-- Looking for chmod - found
-- Looking for fseeko
-- Looking for fseeko - found
-- Looking for fstat
-- Looking for fstat - found
-- Looking for getcwd
-- Looking for getcwd - found
-- Looking for getpid
-- Looking for getpid - found
-- Looking for mkstemp
-- Looking for mkstemp - found
-- Looking for popen
-- Looking for popen - found
-- Looking for putenv
-- Looking for putenv - found
-- Looking for stat
-- Looking for stat - found
-- Looking for strcasecmp
-- Looking for strcasecmp - found
-- Looking for sysctl
-- Looking for sysctl - not found
-- Looking for times
-- Looking for times - found
-- Looking for erfc
-- Looking for erfc - not found

CMake Deprecation Warning at /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/googletest/CMakeLists.txt:4 (cmake_minimum_required):
  Compatibility with CMake < 2.8.12 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


CMake Deprecation Warning at /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/googletest/googletest/CMakeLists.txt:56 (cmake_minimum_required):
  Compatibility with CMake < 2.8.12 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Found PythonInterp: /usr/bin/python3.10 (found version "3.10.4") 
CMake Deprecation Warning at projects/mts/CMakeLists.txt:8 (cmake_minimum_required):
  Compatibility with CMake < 2.8.12 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.


-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY


-- Build files have been written to: /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
dh_auto_build -- all debruijn_test include_test
	cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" all debruijn_test include_test VERBOSE=1
make[2]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -B/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/CMakeFiles /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make  -f ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build.make ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/depend
make  -f ext/bamtools/api/CMakeFiles/BamTools.dir/build.make ext/bamtools/api/CMakeFiles/BamTools.dir/depend
make  -f ext/cppformat/CMakeFiles/format.dir/build.make ext/cppformat/CMakeFiles/format.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/cppformat /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/cppformat /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/cppformat/CMakeFiles/format.dir/DependInfo.cmake --color=
make  -f ext/getopt_pp/CMakeFiles/getopt_pp.dir/build.make ext/getopt_pp/CMakeFiles/getopt_pp.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/getopt_pp /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/getopt_pp /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/getopt_pp/CMakeFiles/getopt_pp.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api/CMakeFiles/BamTools.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make  -f ext/cppformat/CMakeFiles/format.dir/build.make ext/cppformat/CMakeFiles/format.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make  -f ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build.make ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make  -f ext/bamtools/api/CMakeFiles/BamTools.dir/build.make ext/bamtools/api/CMakeFiles/BamTools.dir/build
[  0%] Building CXX object ext/cppformat/CMakeFiles/format.dir/format.cc.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/cppformat && /usr/bin/c++ -DFMT_USE_FILE_DESCRIPTORS=1 -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/cppformat -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -Wextra -pedantic -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/cppformat/CMakeFiles/format.dir/format.cc.o -MF CMakeFiles/format.dir/format.cc.o.d -o CMakeFiles/format.dir/format.cc.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/cppformat/format.cc
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
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make  -f ext/getopt_pp/CMakeFiles/getopt_pp.dir/build.make ext/getopt_pp/CMakeFiles/getopt_pp.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[  0%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/AffineAlignment.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/AffineAlignment.cpp.o -MF CMakeFiles/ConsensusCore.dir/AffineAlignment.cpp.o.d -o CMakeFiles/ConsensusCore.dir/AffineAlignment.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/AffineAlignment.cpp
[  1%] Building CXX object ext/getopt_pp/CMakeFiles/getopt_pp.dir/getopt_pp.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/getopt_pp && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/getopt_pp/CMakeFiles/getopt_pp.dir/getopt_pp.cpp.o -MF CMakeFiles/getopt_pp.dir/getopt_pp.cpp.o.d -o CMakeFiles/getopt_pp.dir/getopt_pp.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/getopt_pp/getopt_pp.cpp
[  1%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o -MF CMakeFiles/BamTools.dir/BamAlignment.cpp.o.d -o CMakeFiles/BamTools.dir/BamAlignment.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/BamAlignment.cpp
[  1%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/BamMultiReader.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -MF CMakeFiles/BamTools.dir/BamMultiReader.cpp.o.d -o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/BamMultiReader.cpp
[  1%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Coverage.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Coverage.cpp.o -MF CMakeFiles/ConsensusCore.dir/Coverage.cpp.o.d -o CMakeFiles/ConsensusCore.dir/Coverage.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Coverage.cpp
[  1%] Linking CXX static library libgetopt_pp.a
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/getopt_pp && /usr/bin/cmake -P CMakeFiles/getopt_pp.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/getopt_pp && /usr/bin/cmake -E cmake_link_script CMakeFiles/getopt_pp.dir/link.txt --verbose=1
/usr/bin/ar qc libgetopt_pp.a CMakeFiles/getopt_pp.dir/getopt_pp.cpp.o
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make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[  1%] Built target getopt_pp
make  -f ext/llvm/CMakeFiles/llvm-support.dir/build.make ext/llvm/CMakeFiles/llvm-support.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm/CMakeFiles/llvm-support.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make  -f ext/llvm/CMakeFiles/llvm-support.dir/build.make ext/llvm/CMakeFiles/llvm-support.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[  1%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/APFloat.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/APFloat.cpp.o -MF CMakeFiles/llvm-support.dir/APFloat.cpp.o.d -o CMakeFiles/llvm-support.dir/APFloat.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/APFloat.cpp
[  1%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Mutation.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Mutation.cpp.o -MF CMakeFiles/ConsensusCore.dir/Mutation.cpp.o.d -o CMakeFiles/ConsensusCore.dir/Mutation.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Mutation.cpp
[  1%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/BamReader.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/BamReader.cpp.o -MF CMakeFiles/BamTools.dir/BamReader.cpp.o.d -o CMakeFiles/BamTools.dir/BamReader.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/BamReader.cpp
[  1%] Building CXX object ext/cppformat/CMakeFiles/format.dir/posix.cc.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/cppformat && /usr/bin/c++ -DFMT_USE_FILE_DESCRIPTORS=1 -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/cppformat -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wall -Wextra -pedantic -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/cppformat/CMakeFiles/format.dir/posix.cc.o -MF CMakeFiles/format.dir/posix.cc.o.d -o CMakeFiles/format.dir/posix.cc.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/cppformat/posix.cc
[  1%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/BamWriter.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/BamWriter.cpp.o -MF CMakeFiles/BamTools.dir/BamWriter.cpp.o.d -o CMakeFiles/BamTools.dir/BamWriter.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/BamWriter.cpp
[  2%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamHeader.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamHeader.cpp.o -MF CMakeFiles/BamTools.dir/SamHeader.cpp.o.d -o CMakeFiles/BamTools.dir/SamHeader.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamHeader.cpp
[  2%] Linking CXX static library libformat.a
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/cppformat && /usr/bin/cmake -P CMakeFiles/format.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/cppformat && /usr/bin/cmake -E cmake_link_script CMakeFiles/format.dir/link.txt --verbose=1
/usr/bin/ar qc libformat.a CMakeFiles/format.dir/format.cc.o CMakeFiles/format.dir/posix.cc.o
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make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[  2%] Built target format
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make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gqf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gqf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gqf/CMakeFiles/gqf.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[  2%] Building C object ext/gqf/CMakeFiles/gqf.dir/gqf.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gqf && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/gqf/CMakeFiles/gqf.dir/gqf.c.o -MF CMakeFiles/gqf.dir/gqf.c.o.d -o CMakeFiles/gqf.dir/gqf.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gqf/gqf.c
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/gqf/gqf.h: In function 'qf_deserialize':
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gqf/gqf.c:1606:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1606 |         fread(qf->metadata, sizeof(qfmetadata), 1, fin);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gqf/gqf.c:1615:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
 1615 |         fread(qf->blocks, qf->metadata->size, 1, fin);
      |         ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  2%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamProgram.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamProgram.cpp.o -MF CMakeFiles/BamTools.dir/SamProgram.cpp.o.d -o CMakeFiles/BamTools.dir/SamProgram.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamProgram.cpp
[  2%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamProgramChain.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamProgramChain.cpp.o -MF CMakeFiles/BamTools.dir/SamProgramChain.cpp.o.d -o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamProgramChain.cpp
[  3%] Linking C static library libgqf.a
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gqf && /usr/bin/cmake -P CMakeFiles/gqf.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gqf && /usr/bin/cmake -E cmake_link_script CMakeFiles/gqf.dir/link.txt --verbose=1
/usr/bin/ar qc libgqf.a CMakeFiles/gqf.dir/gqf.c.o
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make  -f ext/edlib/CMakeFiles/edlib.dir/build.make ext/edlib/CMakeFiles/edlib.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/edlib /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/edlib /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/edlib/CMakeFiles/edlib.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
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[  3%] Building CXX object ext/edlib/CMakeFiles/edlib.dir/edlib.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/edlib && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/edlib/CMakeFiles/edlib.dir/edlib.cpp.o -MF CMakeFiles/edlib.dir/edlib.cpp.o.d -o CMakeFiles/edlib.dir/edlib.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/edlib/edlib.cpp
[  3%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamReadGroup.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -MF CMakeFiles/BamTools.dir/SamReadGroup.cpp.o.d -o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamReadGroup.cpp
[  3%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o -MF CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o.d -o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamReadGroupDictionary.cpp
[  4%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/PairwiseAlignment.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/PairwiseAlignment.cpp.o -MF CMakeFiles/ConsensusCore.dir/PairwiseAlignment.cpp.o.d -o CMakeFiles/ConsensusCore.dir/PairwiseAlignment.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/PairwiseAlignment.cpp
[  4%] Linking CXX static library libedlib.a
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/edlib && /usr/bin/cmake -P CMakeFiles/edlib.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/edlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/edlib.dir/link.txt --verbose=1
/usr/bin/ar qc libedlib.a CMakeFiles/edlib.dir/edlib.cpp.o
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[  4%] Built target edlib
[  4%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/APInt.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/APInt.cpp.o -MF CMakeFiles/llvm-support.dir/APInt.cpp.o.d -o CMakeFiles/llvm-support.dir/APInt.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/APInt.cpp
make  -f ext/gfa1/CMakeFiles/gfa1.dir/build.make ext/gfa1/CMakeFiles/gfa1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1 /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gfa1 /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gfa1/CMakeFiles/gfa1.dir/DependInfo.cmake --color=
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make[4]: Entering directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[  4%] Building C object ext/gfa1/CMakeFiles/gfa1.dir/gfa.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/gfa1 && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/gfa1/CMakeFiles/gfa1.dir/gfa.c.o -MF CMakeFiles/gfa1.dir/gfa.c.o.d -o CMakeFiles/gfa1.dir/gfa.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1/gfa.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1/gfa.c:1093:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1/kdq.h:9:24: error: width of 'front' exceeds its type
    9 |                 size_t front:58, bits:6, count, mask; \
      |                        ^~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1/kdq.h:93:9: note: in expansion of macro '__KDQ_TYPE'
   93 |         __KDQ_TYPE(type) \
      |         ^~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1/kdq.h:104:24: note: in expansion of macro 'KDQ_INIT2'
  104 | #define KDQ_INIT(type) KDQ_INIT2(type, static inline klib_unused)
      |                        ^~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/gfa1/gfa.c:1094:1: note: in expansion of macro 'KDQ_INIT'
 1094 | KDQ_INIT(uint64_t)
      | ^~~~~~~~
make[4]: *** [ext/gfa1/CMakeFiles/gfa1.dir/build.make:79: ext/gfa1/CMakeFiles/gfa1.dir/gfa.c.o] Error 1
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[  5%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamSequence.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamSequence.cpp.o -MF CMakeFiles/BamTools.dir/SamSequence.cpp.o.d -o CMakeFiles/BamTools.dir/SamSequence.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamSequence.cpp
[  5%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o -MF CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o.d -o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/SamSequenceDictionary.cpp
[  5%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/bam/BamHeader_p.cpp
[  5%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Sequence.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Sequence.cpp.o -MF CMakeFiles/ConsensusCore.dir/Sequence.cpp.o.d -o CMakeFiles/ConsensusCore.dir/Sequence.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Sequence.cpp
[  5%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Atomic.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Atomic.cpp.o -MF CMakeFiles/llvm-support.dir/Atomic.cpp.o.d -o CMakeFiles/llvm-support.dir/Atomic.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Atomic.cpp
[  5%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Utils.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Utils.cpp.o -MF CMakeFiles/ConsensusCore.dir/Utils.cpp.o.d -o CMakeFiles/ConsensusCore.dir/Utils.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Utils.cpp
[  5%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Version.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Version.cpp.o -MF CMakeFiles/ConsensusCore.dir/Version.cpp.o.d -o CMakeFiles/ConsensusCore.dir/Version.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Version.cpp
[  5%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/bam/BamMultiReader_p.cpp
[  5%] Building CXX object ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/ConsensusCore && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o -MF CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o.d -o CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Matrix/DenseMatrix.cpp
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/ConsensusCore/Matrix/DenseMatrix.cpp:39:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include/ConsensusCore/Matrix/DenseMatrix.hpp:40:10: fatal error: xmmintrin.h: No such file or directory
   40 | #include <xmmintrin.h>
      |          ^~~~~~~~~~~~~
compilation terminated.
make[4]: *** [ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/build.make:177: ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/Matrix/DenseMatrix.cpp.o] Error 1
make[4]: *** Waiting for unfinished jobs....
[  5%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o
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[  6%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/bam/BamReader_p.cpp
[  7%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/CrashRecoveryContext.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/CrashRecoveryContext.cpp.o -MF CMakeFiles/llvm-support.dir/CrashRecoveryContext.cpp.o.d -o CMakeFiles/llvm-support.dir/CrashRecoveryContext.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/CrashRecoveryContext.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make[3]: *** [CMakeFiles/Makefile2:1250: ext/ConsensusCore/CMakeFiles/ConsensusCore.dir/all] Error 2
[  7%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Debug.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Debug.cpp.o -MF CMakeFiles/llvm-support.dir/Debug.cpp.o.d -o CMakeFiles/llvm-support.dir/Debug.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Debug.cpp
[  7%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/bam/BamWriter_p.cpp
[  7%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamIndexFactory_p.cpp
[  7%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Errno.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Errno.cpp.o -MF CMakeFiles/llvm-support.dir/Errno.cpp.o.d -o CMakeFiles/llvm-support.dir/Errno.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Errno.cpp
[  7%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Error.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Error.cpp.o -MF CMakeFiles/llvm-support.dir/Error.cpp.o.d -o CMakeFiles/llvm-support.dir/Error.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Error.cpp
[  7%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/ErrorHandling.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/ErrorHandling.cpp.o -MF CMakeFiles/llvm-support.dir/ErrorHandling.cpp.o.d -o CMakeFiles/llvm-support.dir/ErrorHandling.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/ErrorHandling.cpp
[  7%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp
[  7%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamToolsIndex_p.cpp
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamToolsIndex_p.cpp:10:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BamTools::Internal::BtiBlock&}; _Tp = BamTools::Internal::BtiBlock; _Alloc = std::allocator<BamTools::Internal::BtiBlock>]':
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<BamTools::Internal::BtiBlock>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:67,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamToolsIndex_p.cpp:10:
/usr/include/c++/11/bits/stl_vector.h: In member function 'void BamTools::Internal::BamToolsIndex::ReadBlocks(const BamTools::Internal::BtiReferenceSummary&, BamTools::Internal::BtiBlockVector&)':
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BtiBlock*, std::vector<BamTools::Internal::BtiBlock> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[  9%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/FoldingSet.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/FoldingSet.cpp.o -MF CMakeFiles/llvm-support.dir/FoldingSet.cpp.o.d -o CMakeFiles/llvm-support.dir/FoldingSet.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/FoldingSet.cpp
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamToolsIndex_p.cpp:10:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {BamTools::Internal::BtiReferenceSummary}; _Tp = BamTools::Internal::BtiReferenceSummary; _Alloc = std::allocator<BamTools::Internal::BtiReferenceSummary>]':
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<BamTools::Internal::BtiReferenceSummary>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc: In member function 'void BamTools::Internal::BamToolsIndex::InitializeFileSummary(const int&)':
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BtiReferenceSummary*, std::vector<BamTools::Internal::BtiReferenceSummary> >' changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  9%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/FormatVariadic.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/FormatVariadic.cpp.o -MF CMakeFiles/llvm-support.dir/FormatVariadic.cpp.o.d -o CMakeFiles/llvm-support.dir/FormatVariadic.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/FormatVariadic.cpp
In file included from /usr/include/c++/11/bits/stl_algo.h:61,
                 from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:21:
/usr/include/c++/11/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/11/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:67,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamToolsIndex_p.cpp:10:
/usr/include/c++/11/bits/stl_vector.h: In member function 'virtual bool BamTools::Internal::BamToolsIndex::Create()':
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BtiBlock*, std::vector<BamTools::Internal::BtiBlock> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BtiBlock*, std::vector<BamTools::Internal::BtiBlock> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BtiBlock*, std::vector<BamTools::Internal::BtiBlock> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/11/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Distance = int; _Tp = long long int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/11/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
In file included from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:21:
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
 1819 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1925 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h:1939:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1939 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
 1925 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h:1939:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
 1939 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1819 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
[ 10%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/BamDeviceFactory_p.cpp
/usr/include/c++/11/bits/stl_algo.h: In member function 'void BamTools::Internal::BamStandardIndex::SortLinearOffsets(BamTools::Internal::BaiLinearOffsetVector&)':
/usr/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1954 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1955 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1956 |                                 __comp);
      |                                 ~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1866:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1866 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1871:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1871 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:10:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const BamTools::Internal::BaiAlignmentChunk&}; _Tp = BamTools::Internal::BaiAlignmentChunk; _Alloc = std::allocator<BamTools::Internal::BaiAlignmentChunk>]':
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<BamTools::Internal::BaiAlignmentChunk>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<BamTools::Internal::BaiAlignmentChunk>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/11/vector:67,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:10:
/usr/include/c++/11/bits/stl_vector.h: In member function 'void BamTools::Internal::BamStandardIndex::MergeAlignmentChunks(BamTools::Internal::BaiAlignmentChunkVector&)':
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BaiAlignmentChunk*, std::vector<BamTools::Internal::BaiAlignmentChunk> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BaiAlignmentChunk*, std::vector<BamTools::Internal::BaiAlignmentChunk> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 10%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/BamFile_p.cpp
/usr/include/c++/11/bits/stl_vector.h: In member function 'void BamTools::Internal::BamStandardIndex::SaveAlignmentChunkToBin(BamTools::Internal::BaiBinMap&, const uint32_t&, const uint64_t&, const uint64_t&)':
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BaiAlignmentChunk*, std::vector<BamTools::Internal::BaiAlignmentChunk> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/11/bits/stl_vector.h:1198:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<BamTools::Internal::BaiAlignmentChunk*, std::vector<BamTools::Internal::BaiAlignmentChunk> >' changed in GCC 7.1
 1198 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 10%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/BgzfStream_p.cpp
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:10:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/11/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/11/vector:67,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:10:
/usr/include/c++/11/bits/stl_vector.h: In member function 'void BamTools::Internal::BamStandardIndex::SaveLinearOffsetEntry(BamTools::Internal::BaiLinearOffsetVector&, const int&, const int&, const uint64_t&)':
/usr/include/c++/11/bits/stl_vector.h:960:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  960 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Hashing.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Hashing.cpp.o -MF CMakeFiles/llvm-support.dir/Hashing.cpp.o.d -o CMakeFiles/llvm-support.dir/Hashing.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Hashing.cpp
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAux.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/bamtools/api/BamAlignment.h:14,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:10:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long int}; _Tp = long long int; _Alloc = std::allocator<long long int>]':
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long int>::iterator' changed in GCC 7.1
/usr/include/c++/11/bits/vector.tcc: In member function 'void BamTools::Internal::BamStandardIndex::CalculateCandidateOffsets(const BamTools::Internal::BaiReferenceSummary&, const uint64_t&, std::set<short unsigned int>&, std::vector<long long int>&)':
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:175:1: note: parameter passing for argument of type 'std::vector<long long int>::iterator' changed in GCC 7.1
  175 | }
      | ^
In file included from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/index/BamStandardIndex_p.cpp:21:
/usr/include/c++/11/bits/stl_algo.h: In member function 'void BamTools::Internal::BamStandardIndex::GetOffset(const BamTools::BamRegion&, int64_t&, bool*)':
/usr/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
 1954 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1955 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1956 |                                 __comp);
      |                                 ~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1866:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
 1866 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1871:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long int*, std::vector<long long int> >' changed in GCC 7.1
 1871 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/ByteArray_p.cpp
[ 10%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/ILocalIODevice_p.cpp
[ 10%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Host.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Host.cpp.o -MF CMakeFiles/llvm-support.dir/Host.cpp.o.d -o CMakeFiles/llvm-support.dir/Host.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Host.cpp
[ 11%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/ParallelBgzfStream_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/ParallelBgzfStream_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/ParallelBgzfStream_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/ParallelBgzfStream_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/ParallelBgzfStream_p.cpp
[ 11%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/RollingBuffer_p.cpp
[ 11%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/SerialBgzfStream_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/SerialBgzfStream_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/io/SerialBgzfStream_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/io/SerialBgzfStream_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/SerialBgzfStream_p.cpp
[ 11%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/bgzf.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/bgzf.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/bgzf.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/bgzf.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.c:32:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.c: In function 'bgzf_check_EOF':
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.h:73:34: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result]
   73 | #define _bgzf_read(fp, buf, len) fread(buf, 1, len, (_bgzf_file_t)fp)
      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.c:578:9: note: in expansion of macro '_bgzf_read'
  578 |         _bgzf_read(fp->fp, buf, 28);
      |         ^~~~~~~~~~
[ 11%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/knetfile.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/knetfile.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/knetfile.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/knetfile.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.c
[ 12%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/block.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/block.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/block.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/block.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/block.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.c:46:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.c: In function 'kftp_send_cmd':
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.h:9:32: warning: ignoring return value of 'write' declared with attribute 'warn_unused_result' [-Wunused-result]
    9 | #define netwrite(fd, ptr, len) write(fd, ptr, len)
      |                                ^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.c:236:9: note: in expansion of macro 'netwrite'
  236 |         netwrite(ftp->ctrl_fd, cmd, strlen(cmd));
      |         ^~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.c: In function 'khttp_connect_file':
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.h:9:32: warning: ignoring return value of 'write' declared with attribute 'warn_unused_result' [-Wunused-result]
    9 | #define netwrite(fd, ptr, len) write(fd, ptr, len)
      |                                ^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/knetfile.c:415:9: note: in expansion of macro 'netwrite'
  415 |         netwrite(fp->fd, buf, l);
      |         ^~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/block.c:5:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:8:1: warning: inline function 'safe_mutex_unlock' declared but never defined
    8 | safe_mutex_unlock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:5:1: warning: inline function 'safe_mutex_lock' declared but never defined
    5 | safe_mutex_lock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/block.c:4:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.h:240:11: warning: inline function 'unpackInt16' declared but never defined
  240 |           unpackInt16(const uint8_t* buffer);
      |           ^~~~~~~~~~~
[ 12%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/consumer.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/consumer.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/consumer.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/consumer.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/consumer.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/consumer.c:12:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:8:1: warning: inline function 'safe_mutex_unlock' declared but never defined
    8 | safe_mutex_unlock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:5:1: warning: inline function 'safe_mutex_lock' declared but never defined
    5 | safe_mutex_lock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/consumer.c:11:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.h:240:11: warning: inline function 'unpackInt16' declared but never defined
  240 |           unpackInt16(const uint8_t* buffer);
      |           ^~~~~~~~~~~
[ 12%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/pbgzf.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/pbgzf.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/pbgzf.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/pbgzf.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/pbgzf.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/pbgzf.c:14:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:8:1: warning: inline function 'safe_mutex_unlock' declared but never defined
    8 | safe_mutex_unlock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:5:1: warning: inline function 'safe_mutex_lock' declared but never defined
    5 | safe_mutex_lock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/pbgzf.c:13:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.h:240:11: warning: inline function 'unpackInt16' declared but never defined
  240 |           unpackInt16(const uint8_t* buffer);
      |           ^~~~~~~~~~~
[ 12%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/queue.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/queue.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/queue.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/queue.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/queue.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/queue.c:6:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:8:1: warning: inline function 'safe_mutex_unlock' declared but never defined
    8 | safe_mutex_unlock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:5:1: warning: inline function 'safe_mutex_lock' declared but never defined
    5 | safe_mutex_lock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~
[ 12%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/JSON.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/JSON.cpp.o -MF CMakeFiles/llvm-support.dir/JSON.cpp.o.d -o CMakeFiles/llvm-support.dir/JSON.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/JSON.cpp
[ 12%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/reader.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/reader.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/reader.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/reader.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/reader.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/reader.c:8:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:8:1: warning: inline function 'safe_mutex_unlock' declared but never defined
    8 | safe_mutex_unlock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:5:1: warning: inline function 'safe_mutex_lock' declared but never defined
    5 | safe_mutex_lock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/reader.c:7:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.h:240:11: warning: inline function 'unpackInt16' declared but never defined
  240 |           unpackInt16(const uint8_t* buffer);
      |           ^~~~~~~~~~~
[ 13%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/util.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/util.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/util.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/util.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.c
[ 13%] Building C object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/writer.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cc -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/io/pbgzf/writer.c.o -MF CMakeFiles/BamTools.dir/internal/io/pbgzf/writer.c.o.d -o CMakeFiles/BamTools.dir/internal/io/pbgzf/writer.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/writer.c
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/pbgzf.h:11,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/writer.c:10:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:8:1: warning: inline function 'safe_mutex_unlock' declared but never defined
    8 | safe_mutex_unlock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/util.h:5:1: warning: inline function 'safe_mutex_lock' declared but never defined
    5 | safe_mutex_lock(pthread_mutex_t *mutex);
      | ^~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/writer.c:7:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/io/pbgzf/bgzf.h:240:11: warning: inline function 'unpackInt16' declared but never defined
  240 |           unpackInt16(const uint8_t* buffer);
      |           ^~~~~~~~~~~
[ 13%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/sam/SamFormatParser_p.cpp
[ 13%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/sam/SamFormatPrinter_p.cpp
[ 14%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/LEB128.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/LEB128.cpp.o -MF CMakeFiles/llvm-support.dir/LEB128.cpp.o.d -o CMakeFiles/llvm-support.dir/LEB128.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/LEB128.cpp
[ 14%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/LineIterator.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/LineIterator.cpp.o -MF CMakeFiles/llvm-support.dir/LineIterator.cpp.o.d -o CMakeFiles/llvm-support.dir/LineIterator.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/LineIterator.cpp
[ 14%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/sam/SamHeaderValidator_p.cpp
[ 15%] Building CXX object ext/bamtools/api/CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D_FILE_OFFSET_BITS=64 -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/src -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/bamtools/api/CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -MF CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o.d -o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/bamtools/api/internal/utils/BamException_p.cpp
[ 15%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Locale.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Locale.cpp.o -MF CMakeFiles/llvm-support.dir/Locale.cpp.o.d -o CMakeFiles/llvm-support.dir/Locale.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Locale.cpp
[ 15%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/MD5.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/MD5.cpp.o -MF CMakeFiles/llvm-support.dir/MD5.cpp.o.d -o CMakeFiles/llvm-support.dir/MD5.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/MD5.cpp
[ 15%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/ManagedStatic.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/ManagedStatic.cpp.o -MF CMakeFiles/llvm-support.dir/ManagedStatic.cpp.o.d -o CMakeFiles/llvm-support.dir/ManagedStatic.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/ManagedStatic.cpp
[ 15%] Linking CXX static library libBamTools.a
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cmake -P CMakeFiles/BamTools.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/bamtools/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools.dir/link.txt --verbose=1
/usr/bin/ar qc libBamTools.a CMakeFiles/BamTools.dir/BamAlignment.cpp.o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o CMakeFiles/BamTools.dir/BamReader.cpp.o CMakeFiles/BamTools.dir/BamWriter.cpp.o CMakeFiles/BamTools.dir/SamHeader.cpp.o CMakeFiles/BamTools.dir/SamProgram.cpp.o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o CMakeFiles/BamTools.dir/SamSequence.cpp.o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o CMakeFiles/BamTools.dir/internal/io/ParallelBgzfStream_p.cpp.o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o CMakeFiles/BamTools.dir/internal/io/SerialBgzfStream_p.cpp.o CMakeFiles/BamTools.dir/internal/io/pbgzf/bgzf.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/knetfile.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/block.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/consumer.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/pbgzf.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/queue.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/reader.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/util.c.o CMakeFiles/BamTools.dir/internal/io/pbgzf/writer.c.o CMakeFiles/BamTools.dir/internal/sam/SamFormatParser_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o
/usr/bin/ranlib libBamTools.a
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[ 15%] Built target BamTools
[ 17%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/MemAlloc.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/MemAlloc.cpp.o -MF CMakeFiles/llvm-support.dir/MemAlloc.cpp.o.d -o CMakeFiles/llvm-support.dir/MemAlloc.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/MemAlloc.cpp
[ 17%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/MemoryBuffer.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/MemoryBuffer.cpp.o -MF CMakeFiles/llvm-support.dir/MemoryBuffer.cpp.o.d -o CMakeFiles/llvm-support.dir/MemoryBuffer.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/MemoryBuffer.cpp
[ 17%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/NativeFormatting.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/NativeFormatting.cpp.o -MF CMakeFiles/llvm-support.dir/NativeFormatting.cpp.o.d -o CMakeFiles/llvm-support.dir/NativeFormatting.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/NativeFormatting.cpp
[ 17%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Path.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Path.cpp.o -MF CMakeFiles/llvm-support.dir/Path.cpp.o.d -o CMakeFiles/llvm-support.dir/Path.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Path.cpp
[ 17%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Process.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Process.cpp.o -MF CMakeFiles/llvm-support.dir/Process.cpp.o.d -o CMakeFiles/llvm-support.dir/Process.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.cpp
[ 18%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Program.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Program.cpp.o -MF CMakeFiles/llvm-support.dir/Program.cpp.o.d -o CMakeFiles/llvm-support.dir/Program.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Program.cpp
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.cpp:100:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.inc: In static member function 'static size_t llvm::sys::Process::GetMallocUsage()':
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.inc:94:10: warning: 'mallinfo mallinfo()' is deprecated [-Wdeprecated-declarations]
   94 |   mi = ::mallinfo();
      |          ^~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.inc:35,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.cpp:100:
/usr/include/malloc.h:118:24: note: declared here
  118 | extern struct mallinfo mallinfo (void) __THROW __MALLOC_DEPRECATED;
      |                        ^~~~~~~~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.cpp:100:
/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.inc:94:18: warning: 'mallinfo mallinfo()' is deprecated [-Wdeprecated-declarations]
   94 |   mi = ::mallinfo();
      |        ~~~~~~~~~~^~
In file included from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.inc:35,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Process.cpp:100:
/usr/include/malloc.h:118:24: note: declared here
  118 | extern struct mallinfo mallinfo (void) __THROW __MALLOC_DEPRECATED;
      |                        ^~~~~~~~
[ 18%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Regex.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Regex.cpp.o -MF CMakeFiles/llvm-support.dir/Regex.cpp.o.d -o CMakeFiles/llvm-support.dir/Regex.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Regex.cpp
[ 18%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Signals.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Signals.cpp.o -MF CMakeFiles/llvm-support.dir/Signals.cpp.o.d -o CMakeFiles/llvm-support.dir/Signals.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Signals.cpp
[ 18%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/SmallVector.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/SmallVector.cpp.o -MF CMakeFiles/llvm-support.dir/SmallVector.cpp.o.d -o CMakeFiles/llvm-support.dir/SmallVector.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/SmallVector.cpp
[ 18%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/SourceMgr.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/SourceMgr.cpp.o -MF CMakeFiles/llvm-support.dir/SourceMgr.cpp.o.d -o CMakeFiles/llvm-support.dir/SourceMgr.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/SourceMgr.cpp
[ 19%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/StringExtras.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/StringExtras.cpp.o -MF CMakeFiles/llvm-support.dir/StringExtras.cpp.o.d -o CMakeFiles/llvm-support.dir/StringExtras.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/StringExtras.cpp
[ 19%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/StringMap.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/StringMap.cpp.o -MF CMakeFiles/llvm-support.dir/StringMap.cpp.o.d -o CMakeFiles/llvm-support.dir/StringMap.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/StringMap.cpp
[ 19%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/StringRef.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/StringRef.cpp.o -MF CMakeFiles/llvm-support.dir/StringRef.cpp.o.d -o CMakeFiles/llvm-support.dir/StringRef.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/StringRef.cpp
[ 19%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/StringSaver.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/StringSaver.cpp.o -MF CMakeFiles/llvm-support.dir/StringSaver.cpp.o.d -o CMakeFiles/llvm-support.dir/StringSaver.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/StringSaver.cpp
[ 19%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/ThreadLocal.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/ThreadLocal.cpp.o -MF CMakeFiles/llvm-support.dir/ThreadLocal.cpp.o.d -o CMakeFiles/llvm-support.dir/ThreadLocal.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/ThreadLocal.cpp
[ 20%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Threading.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Threading.cpp.o -MF CMakeFiles/llvm-support.dir/Threading.cpp.o.d -o CMakeFiles/llvm-support.dir/Threading.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Threading.cpp
[ 20%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/TimeProfiler.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/TimeProfiler.cpp.o -MF CMakeFiles/llvm-support.dir/TimeProfiler.cpp.o.d -o CMakeFiles/llvm-support.dir/TimeProfiler.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp
[ 20%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Twine.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Twine.cpp.o -MF CMakeFiles/llvm-support.dir/Twine.cpp.o.d -o CMakeFiles/llvm-support.dir/Twine.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Twine.cpp
[ 20%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/Unicode.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/Unicode.cpp.o -MF CMakeFiles/llvm-support.dir/Unicode.cpp.o.d -o CMakeFiles/llvm-support.dir/Unicode.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/Unicode.cpp
[ 20%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/WithColor.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/WithColor.cpp.o -MF CMakeFiles/llvm-support.dir/WithColor.cpp.o.d -o CMakeFiles/llvm-support.dir/WithColor.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/WithColor.cpp
[ 21%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/YAMLParser.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/YAMLParser.cpp.o -MF CMakeFiles/llvm-support.dir/YAMLParser.cpp.o.d -o CMakeFiles/llvm-support.dir/YAMLParser.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/YAMLParser.cpp
[ 21%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/YAMLTraits.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/YAMLTraits.cpp.o -MF CMakeFiles/llvm-support.dir/YAMLTraits.cpp.o.d -o CMakeFiles/llvm-support.dir/YAMLTraits.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/YAMLTraits.cpp
In file included from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/iterator.h:13,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/STLExtras.h:20,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/Error.h:16,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/TimeProfiler.h:12,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp:13:
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<llvm::TimeTraceProfiler::write(llvm::raw_pwrite_stream&)::<lambda(const NameAndCountAndDurationType&, const NameAndCountAndDurationType&)> >]':
/usr/include/c++/11/bits/stl_algo.h:1799:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1799 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<llvm::TimeTraceProfiler::write(llvm::raw_pwrite_stream&)::<lambda(const NameAndCountAndDurationType&, const NameAndCountAndDurationType&)> >]':
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1819 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
In file included from /usr/include/c++/11/bits/stl_algo.h:61,
                 from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/iterator.h:13,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/STLExtras.h:20,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/Error.h:16,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/TimeProfiler.h:12,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp:13:
/usr/include/c++/11/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >; _Distance = int; _Tp = std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<llvm::TimeTraceProfiler::write(llvm::raw_pwrite_stream&)::<lambda(const NameAndCountAndDurationType&, const NameAndCountAndDurationType&)> >]':
/usr/include/c++/11/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
[ 21%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/raw_os_ostream.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/raw_os_ostream.cpp.o -MF CMakeFiles/llvm-support.dir/raw_os_ostream.cpp.o.d -o CMakeFiles/llvm-support.dir/raw_os_ostream.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/raw_os_ostream.cpp
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/ArrayRef.h:25,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/StringExtras.h:16,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/Error.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/TimeProfiler.h:12,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp:13:
/usr/include/c++/11/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, const std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > >&}; _Tp = std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >; _Alloc = std::allocator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > >]':
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > >::iterator' changed in GCC 7.1
In file included from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/iterator.h:13,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/STLExtras.h:20,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/Error.h:16,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/TimeProfiler.h:12,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp:13:
/usr/include/c++/11/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<llvm::TimeTraceProfiler::write(llvm::raw_pwrite_stream&)::<lambda(const NameAndCountAndDurationType&, const NameAndCountAndDurationType&)> >]':
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1925 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1925:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
/usr/include/c++/11/bits/stl_algo.h:1939:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1939 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/vector:72,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/ArrayRef.h:25,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/StringExtras.h:16,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/Error.h:18,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/TimeProfiler.h:12,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp:13:
/usr/include/c++/11/bits/vector.tcc: In member function 'void llvm::TimeTraceProfiler::write(llvm::raw_pwrite_stream&)':
/usr/include/c++/11/bits/vector.tcc:121:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
  121 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/11/algorithm:62,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/iterator.h:13,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/ADT/STLExtras.h:20,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/Error.h:16,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include/llvm/Support/TimeProfiler.h:12,
                 from /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/TimeProfiler.cpp:13:
/usr/include/c++/11/bits/stl_algo.h:1954:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1954 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1955 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1956 |                                 __comp);
      |                                 ~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1866:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1866 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/11/bits/stl_algo.h:1871:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > >*, std::vector<std::pair<std::__cxx11::basic_string<char>, std::pair<unsigned int, std::chrono::duration<long long int, std::ratio<1, 1000000000> > > > > >' changed in GCC 7.1
 1871 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Building CXX object ext/llvm/CMakeFiles/llvm-support.dir/raw_ostream.cpp.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/c++ -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -std=gnu++14 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/raw_ostream.cpp.o -MF CMakeFiles/llvm-support.dir/raw_ostream.cpp.o.d -o CMakeFiles/llvm-support.dir/raw_ostream.cpp.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/raw_ostream.cpp
[ 21%] Building C object ext/llvm/CMakeFiles/llvm-support.dir/regcomp.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/regcomp.c.o -MF CMakeFiles/llvm-support.dir/regcomp.c.o.d -o CMakeFiles/llvm-support.dir/regcomp.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/regcomp.c
[ 22%] Building C object ext/llvm/CMakeFiles/llvm-support.dir/regerror.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/regerror.c.o -MF CMakeFiles/llvm-support.dir/regerror.c.o.d -o CMakeFiles/llvm-support.dir/regerror.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/regerror.c
[ 22%] Building C object ext/llvm/CMakeFiles/llvm-support.dir/regexec.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/regexec.c.o -MF CMakeFiles/llvm-support.dir/regexec.c.o.d -o CMakeFiles/llvm-support.dir/regexec.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/regexec.c
[ 22%] Building C object ext/llvm/CMakeFiles/llvm-support.dir/regfree.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/regfree.c.o -MF CMakeFiles/llvm-support.dir/regfree.c.o.d -o CMakeFiles/llvm-support.dir/regfree.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/regfree.c
[ 22%] Building C object ext/llvm/CMakeFiles/llvm-support.dir/regstrlcpy.c.o
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cc -DNDEBUG -DUSE_GLIBCXX_PARALLEL=1 -D__STDC_CONSTANT_MACROS -D__STDC_LIMIT_MACROS -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/include -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/common -I/<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/src/../ext/include -isystem /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/include -g -O2 -ffile-prefix-map=/<<BUILDDIR>>/spades-3.15.4+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -Wno-deprecated -O2 -MD -MT ext/llvm/CMakeFiles/llvm-support.dir/regstrlcpy.c.o -MF CMakeFiles/llvm-support.dir/regstrlcpy.c.o.d -o CMakeFiles/llvm-support.dir/regstrlcpy.c.o -c /<<BUILDDIR>>/spades-3.15.4+dfsg/assembler/ext/src/llvm/regstrlcpy.c
[ 22%] Linking CXX static library libllvm-support.a
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cmake -P CMakeFiles/llvm-support.dir/cmake_clean_target.cmake
cd /<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf/ext/llvm && /usr/bin/cmake -E cmake_link_script CMakeFiles/llvm-support.dir/link.txt --verbose=1
/usr/bin/ar qc libllvm-support.a "CMakeFiles/llvm-support.dir/APFloat.cpp.o" "CMakeFiles/llvm-support.dir/APInt.cpp.o" "CMakeFiles/llvm-support.dir/Atomic.cpp.o" "CMakeFiles/llvm-support.dir/CrashRecoveryContext.cpp.o" "CMakeFiles/llvm-support.dir/Debug.cpp.o" "CMakeFiles/llvm-support.dir/Errno.cpp.o" "CMakeFiles/llvm-support.dir/Error.cpp.o" "CMakeFiles/llvm-support.dir/ErrorHandling.cpp.o" "CMakeFiles/llvm-support.dir/FoldingSet.cpp.o" "CMakeFiles/llvm-support.dir/FormatVariadic.cpp.o" "CMakeFiles/llvm-support.dir/Hashing.cpp.o" "CMakeFiles/llvm-support.dir/Host.cpp.o" "CMakeFiles/llvm-support.dir/JSON.cpp.o" "CMakeFiles/llvm-support.dir/LEB128.cpp.o" "CMakeFiles/llvm-support.dir/LineIterator.cpp.o" "CMakeFiles/llvm-support.dir/Locale.cpp.o" "CMakeFiles/llvm-support.dir/MD5.cpp.o" "CMakeFiles/llvm-support.dir/ManagedStatic.cpp.o" "CMakeFiles/llvm-support.dir/MemAlloc.cpp.o" "CMakeFiles/llvm-support.dir/MemoryBuffer.cpp.o" "CMakeFiles/llvm-support.dir/NativeFormatting.cpp.o" "CMakeFiles/llvm-support.dir/Path.cpp.o" "CMakeFiles/llvm-support.dir/Process.cpp.o" "CMakeFiles/llvm-support.dir/Program.cpp.o" "CMakeFiles/llvm-support.dir/Regex.cpp.o" "CMakeFiles/llvm-support.dir/Signals.cpp.o" "CMakeFiles/llvm-support.dir/SmallVector.cpp.o" "CMakeFiles/llvm-support.dir/SourceMgr.cpp.o" "CMakeFiles/llvm-support.dir/StringExtras.cpp.o" "CMakeFiles/llvm-support.dir/StringMap.cpp.o" "CMakeFiles/llvm-support.dir/StringRef.cpp.o" "CMakeFiles/llvm-support.dir/StringSaver.cpp.o" "CMakeFiles/llvm-support.dir/ThreadLocal.cpp.o" "CMakeFiles/llvm-support.dir/Threading.cpp.o" "CMakeFiles/llvm-support.dir/TimeProfiler.cpp.o" "CMakeFiles/llvm-support.dir/Twine.cpp.o" "CMakeFiles/llvm-support.dir/Unicode.cpp.o" "CMakeFiles/llvm-support.dir/WithColor.cpp.o" "CMakeFiles/llvm-support.dir/YAMLParser.cpp.o" "CMakeFiles/llvm-support.dir/YAMLTraits.cpp.o" "CMakeFiles/llvm-support.dir/raw_os_ostream.cpp.o" "CMakeFiles/llvm-support.dir/raw_ostream.cpp.o" "CMakeFiles/llvm-support.dir/regcomp.c.o" "CMakeFiles/llvm-support.dir/regerror.c.o" "CMakeFiles/llvm-support.dir/regexec.c.o" "CMakeFiles/llvm-support.dir/regfree.c.o" "CMakeFiles/llvm-support.dir/regstrlcpy.c.o"
/usr/bin/ranlib libllvm-support.a
make[4]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Built target llvm-support
make[3]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
make[2]: *** [Makefile:169: all] Error 2
make[2]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg/obj-arm-linux-gnueabihf'
dh_auto_build: error: cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" all debruijn_test include_test VERBOSE=1 returned exit code 2
make[1]: *** [debian/rules:29: override_dh_auto_build] Error 25
make[1]: Leaving directory '/<<BUILDDIR>>/spades-3.15.4+dfsg'
make: *** [debian/rules:14: binary-arch] Error 2
dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2
--------------------------------------------------------------------------------
Build finished at 2022-04-15T17:02:26Z

Finished
--------


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
E: Build failure (dpkg-buildpackage died)

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 165092
Build-Time: 214
Distribution: bookworm-staging
Fail-Stage: build
Host Architecture: armhf
Install-Time: 510
Job: spades_3.15.4+dfsg-1
Machine Architecture: armhf
Package: spades
Package-Time: 755
Source-Version: 3.15.4+dfsg-1
Space: 165092
Status: attempted
Version: 3.15.4+dfsg-1
--------------------------------------------------------------------------------
Finished at 2022-04-15T17:02:26Z
Build needed 00:12:35, 165092k disk space