seqtools →
4.44.1+dfsg-3 →
armhf → 2019-01-09 06:49:58
sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-01
+==============================================================================+
| seqtools 4.44.1+dfsg-3 (armhf) Wed, 09 Jan 2019 06:18:57 +0000 |
+==============================================================================+
Package: seqtools
Version: 4.44.1+dfsg-3
Source Version: 4.44.1+dfsg-3
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/buster-staging-armhf-sbuild-e7c67d9c-ff75-4f4f-9de5-bc32dcdccb26' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.1 MB]
Fetched 24.5 MB in 28s (880 kB/s)
Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'seqtools' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/med-team/seqtools.git
Please use:
git clone https://salsa.debian.org/med-team/seqtools.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3865 kB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main seqtools 4.44.1+dfsg-3 (dsc) [2287 B]
Get:2 http://172.17.0.1/private buster-staging/main seqtools 4.44.1+dfsg-3 (tar) [3848 kB]
Get:3 http://172.17.0.1/private buster-staging/main seqtools 4.44.1+dfsg-3 (diff) [14.5 kB]
Fetched 3865 kB in 0s (7812 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/seqtools-p7joX4/seqtools-4.44.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/seqtools-p7joX4' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-scXCD7/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-scXCD7/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-scXCD7/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (3105 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-scXCD7/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n krb5-locales libgpg-error-l10n
libsasl2-modules libssl1.1 openssl
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 5 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15656 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), libgtk2.0-dev, libsqlite3-dev, libcurl4-openssl-dev | libcurl4-dev, libjsoncpp-dev, d-shlibs
Filtered Build-Depends: debhelper (>= 11~), libgtk2.0-dev, libsqlite3-dev, libcurl4-openssl-dev, libjsoncpp-dev, d-shlibs
dpkg-deb: building package 'sbuild-build-depends-seqtools-dummy' in '/<<BUILDDIR>>/resolver-scXCD7/apt_archive/sbuild-build-depends-seqtools-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-seqtools-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Sources [537 B]
Get:5 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Packages [612 B]
Fetched 2482 B in 1s (3310 B/s)
Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-scXCD7/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 35506D9A48F77B2E
Reading package lists...
Install seqtools build dependencies (apt-based resolver)
--------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
ca-certificates e2fsprogs-l10n krb5-locales libgpg-error-l10n
libsasl2-modules openssl
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
adwaita-icon-theme autoconf automake autopoint autotools-dev bsdmainutils
d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gir1.2-atk-1.0
gir1.2-freedesktop gir1.2-gdkpixbuf-2.0 gir1.2-glib-2.0 gir1.2-gtk-2.0
gir1.2-harfbuzz-0.0 gir1.2-pango-1.0 groff-base gtk-update-icon-cache
hicolor-icon-theme icu-devtools intltool-debian libarchive-zip-perl
libatk1.0-0 libatk1.0-data libatk1.0-dev libavahi-client3
libavahi-common-data libavahi-common3 libblkid-dev libbsd0 libcairo-gobject2
libcairo-script-interpreter2 libcairo2 libcairo2-dev libcroco3 libcups2
libcurl4 libcurl4-openssl-dev libdatrie1 libelf1 libexpat1 libexpat1-dev
libffi-dev libfile-stripnondeterminism-perl libfontconfig1
libfontconfig1-dev libfreetype6 libfreetype6-dev libfribidi-dev libfribidi0
libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common
libgdk-pixbuf2.0-dev libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin
libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgraphite2-3
libgraphite2-dev libgtk2.0-0 libgtk2.0-common libgtk2.0-dev libharfbuzz-dev
libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libice-dev libice6
libicu-dev libicu63 libjbig0 libjpeg62-turbo libjsoncpp-dev libjsoncpp1
liblzo2-2 libmagic-mgc libmagic1 libmount-dev libmpdec2 libnghttp2-14
libpango-1.0-0 libpango1.0-dev libpangocairo-1.0-0 libpangoft2-1.0-0
libpangoxft-1.0-0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpixman-1-dev libpng-dev libpsl5
libpthread-stubs0-dev libpython3-stdlib libpython3.7-minimal
libpython3.7-stdlib librsvg2-2 librsvg2-common librtmp1 libselinux1-dev
libsepol1-dev libsigsegv2 libsm-dev libsm6 libsqlite3-dev libssh2-1
libthai-data libthai0 libtiff5 libtool libuchardet0 libwebp6 libx11-6
libx11-data libx11-dev libxau-dev libxau6 libxcb-render0 libxcb-render0-dev
libxcb-shm0 libxcb-shm0-dev libxcb1 libxcb1-dev libxcomposite-dev
libxcomposite1 libxcursor-dev libxcursor1 libxdamage-dev libxdamage1
libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3
libxft-dev libxft2 libxi-dev libxi6 libxinerama-dev libxinerama1 libxml2
libxml2-utils libxrandr-dev libxrandr2 libxrender-dev libxrender1 m4 man-db
mime-support pango1.0-tools pkg-config po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3.7 python3.7-minimal shared-mime-info
ucf uuid-dev x11-common x11proto-composite-dev x11proto-core-dev
x11proto-damage-dev x11proto-dev x11proto-fixes-dev x11proto-input-dev
x11proto-randr-dev x11proto-xext-dev x11proto-xinerama-dev
xorg-sgml-doctools xtrans-dev zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff
libcairo2-doc cups-common libcurl4-doc libidn11-dev libkrb5-dev libldap2-dev
librtmp-dev libssh2-1-dev libssl-dev libglib2.0-doc libgraphite2-utils gvfs
libgtk2.0-doc libice-doc icu-doc imagemagick libpango1.0-doc librsvg2-bin
libsm-doc sqlite3-doc libtool-doc gfortran | fortran95-compiler gcj-jdk
libx11-doc libxcb-doc libxext-doc m4-doc apparmor less www-browser
libmail-box-perl python3-doc python3-tk python3-venv python3.7-venv
python3.7-doc binfmt-support
Recommended packages:
curl | wget | lynx libarchive-cpio-perl freetype2-doc xdg-user-dirs
libgail-common libgtk2.0-bin python libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl
The following NEW packages will be installed:
adwaita-icon-theme autoconf automake autopoint autotools-dev bsdmainutils
d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig
fontconfig-config fonts-dejavu-core gettext gettext-base gir1.2-atk-1.0
gir1.2-freedesktop gir1.2-gdkpixbuf-2.0 gir1.2-glib-2.0 gir1.2-gtk-2.0
gir1.2-harfbuzz-0.0 gir1.2-pango-1.0 groff-base gtk-update-icon-cache
hicolor-icon-theme icu-devtools intltool-debian libarchive-zip-perl
libatk1.0-0 libatk1.0-data libatk1.0-dev libavahi-client3
libavahi-common-data libavahi-common3 libblkid-dev libbsd0 libcairo-gobject2
libcairo-script-interpreter2 libcairo2 libcairo2-dev libcroco3 libcups2
libcurl4 libcurl4-openssl-dev libdatrie1 libelf1 libexpat1 libexpat1-dev
libffi-dev libfile-stripnondeterminism-perl libfontconfig1
libfontconfig1-dev libfreetype6 libfreetype6-dev libfribidi-dev libfribidi0
libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common
libgdk-pixbuf2.0-dev libgirepository-1.0-1 libglib2.0-0 libglib2.0-bin
libglib2.0-data libglib2.0-dev libglib2.0-dev-bin libgraphite2-3
libgraphite2-dev libgtk2.0-0 libgtk2.0-common libgtk2.0-dev libharfbuzz-dev
libharfbuzz-gobject0 libharfbuzz-icu0 libharfbuzz0b libice-dev libice6
libicu-dev libicu63 libjbig0 libjpeg62-turbo libjsoncpp-dev libjsoncpp1
liblzo2-2 libmagic-mgc libmagic1 libmount-dev libmpdec2 libnghttp2-14
libpango-1.0-0 libpango1.0-dev libpangocairo-1.0-0 libpangoft2-1.0-0
libpangoxft-1.0-0 libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5
libpipeline1 libpixman-1-0 libpixman-1-dev libpng-dev libpsl5
libpthread-stubs0-dev libpython3-stdlib libpython3.7-minimal
libpython3.7-stdlib librsvg2-2 librsvg2-common librtmp1 libselinux1-dev
libsepol1-dev libsigsegv2 libsm-dev libsm6 libsqlite3-dev libssh2-1
libthai-data libthai0 libtiff5 libtool libuchardet0 libwebp6 libx11-6
libx11-data libx11-dev libxau-dev libxau6 libxcb-render0 libxcb-render0-dev
libxcb-shm0 libxcb-shm0-dev libxcb1 libxcb1-dev libxcomposite-dev
libxcomposite1 libxcursor-dev libxcursor1 libxdamage-dev libxdamage1
libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxfixes-dev libxfixes3
libxft-dev libxft2 libxi-dev libxi6 libxinerama-dev libxinerama1 libxml2
libxml2-utils libxrandr-dev libxrandr2 libxrender-dev libxrender1 m4 man-db
mime-support pango1.0-tools pkg-config po-debconf python3 python3-distutils
python3-lib2to3 python3-minimal python3.7 python3.7-minimal
sbuild-build-depends-seqtools-dummy shared-mime-info ucf uuid-dev x11-common
x11proto-composite-dev x11proto-core-dev x11proto-damage-dev x11proto-dev
x11proto-fixes-dev x11proto-input-dev x11proto-randr-dev x11proto-xext-dev
x11proto-xinerama-dev xorg-sgml-doctools xtrans-dev zlib1g-dev
0 upgraded, 189 newly installed, 0 to remove and 5 not upgraded.
Need to get 78.2 MB of archives.
After this operation, 289 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-scXCD7/apt_archive ./ sbuild-build-depends-seqtools-dummy 0.invalid.0 [892 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-1 [782 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.4-3 [1160 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.2-1 [582 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf libexpat1 armhf 2.2.6-1 [76.8 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.2-1 [1454 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.1-3 [36.5 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.2-1 [1663 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.2-1 [323 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.1-3 [20.0 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.1-3 [61.5 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.2-3 [1076 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-3 [235 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-5 [7976 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf shared-mime-info armhf 1.10-1 [762 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [315 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.38.0+dfsg-7 [158 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf gtk-update-icon-cache armhf 3.24.2-3 [80.3 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-2 [602 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3 [61.9 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-1 [170 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-1 [35.8 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-1 [50.9 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.12-1 [69.1 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.0-1 [1130 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf librsvg2-2 armhf 2.44.10-1+rpi1 [958 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf librsvg2-common armhf 2.44.10-1+rpi1 [22.8 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf adwaita-icon-theme all 3.30.1-1 [11.7 MB]
Get:64 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf d-shlibs all 0.83 [17.1 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-6 [547 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.0.0-1 [19.5 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.0.0-1 [12.5 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf debhelper all 12 [1002 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libgirepository-1.0-1 armhf 1.58.3-1 [78.7 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf gir1.2-glib-2.0 armhf 1.58.3-1 [143 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf libatk1.0-data all 2.30.0-2 [145 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libatk1.0-0 armhf 2.30.0-2 [42.7 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf gir1.2-atk-1.0 armhf 2.30.0-2 [25.3 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libcairo-gobject2 armhf 1.16.0-2 [123 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf gir1.2-freedesktop armhf 1.58.3-1 [20.3 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf gir1.2-gdkpixbuf-2.0 armhf 2.38.0+dfsg-7 [18.1 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libgtk2.0-common all 2.24.32-3 [2698 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libpangoxft-1.0-0 armhf 1.42.4-6 [47.1 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf gir1.2-pango-1.0 armhf 1.42.4-6 [55.3 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4+b1 [54.0 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.10-3 [286 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libxcomposite1 armhf 1:0.4.4-2 [16.1 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libxfixes3 armhf 1:5.0.3-1 [20.6 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libxcursor1 armhf 1:1.1.15-2 [33.5 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf libxdamage1 armhf 1:1.1.4-3 [14.0 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libxinerama1 armhf 2:1.1.4-1 [16.2 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libxrandr2 armhf 2:1.5.1-1 [34.5 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libgtk2.0-0 armhf 2.24.32-3 [1501 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf gir1.2-gtk-2.0 armhf 2.24.32-3 [213 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-gobject0 armhf 2.3.0-1 [829 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf gir1.2-harfbuzz-0.0 armhf 2.3.0-1 [837 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-5 [166 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf pkg-config armhf 0.29-4 [59.2 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libffi-dev armhf 3.2.1-9 [159 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libglib2.0-data all 2.58.2-3 [1108 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libglib2.0-bin armhf 2.58.2-3 [116 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.1-1 [78.7 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.1-1 [144 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev-bin armhf 2.58.2-3 [154 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf uuid-dev armhf 2.33-0.2 [92.4 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf libblkid-dev armhf 2.33-0.2 [210 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libmount-dev armhf 2.33-0.2 [209 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf libpcre16-3 armhf 2:8.39-11+rpi1 [234 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libpcre32-3 armhf 2:8.39-11+rpi1 [227 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf libpcrecpp0v5 armhf 2:8.39-11+rpi1 [150 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf libpcre3-dev armhf 2:8.39-11+rpi1 [565 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf libsepol1-dev armhf 2.8-1 [309 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libselinux1-dev armhf 2.8-1+b1 [156 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [206 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf libglib2.0-dev armhf 2.58.2-3 [1371 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libatk1.0-dev armhf 2.30.0-2 [88.3 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf liblzo2-2 armhf 2.10-0.1 [48.4 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libcairo-script-interpreter2 armhf 1.16.0-2 [150 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf libpng-dev armhf 1.6.34-2+rpi1 [275 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libfreetype6-dev armhf 2.9.1-3 [479 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf libfontconfig1-dev armhf 2.13.1-2 [943 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf xorg-sgml-doctools all 1:1.11-1 [21.9 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf x11proto-dev all 2018.4-4 [251 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf x11proto-core-dev all 2018.4-4 [3128 B]
Get:138 http://172.17.0.1/private buster-staging/main armhf libxau-dev armhf 1:1.0.8-1+b2 [22.4 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf x11proto-input-dev all 2018.4-4 [3132 B]
Get:141 http://172.17.0.1/private buster-staging/main armhf xtrans-dev all 1.3.5-1 [100 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libpthread-stubs0-dev armhf 0.3-4 [4042 B]
Get:143 http://172.17.0.1/private buster-staging/main armhf libxcb1-dev armhf 1.13.1-2 [169 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf libx11-dev armhf 2:1.6.7-1 [760 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf libxrender-dev armhf 1:0.9.10-1 [37.7 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf x11proto-xext-dev all 2018.4-4 [3128 B]
Get:147 http://172.17.0.1/private buster-staging/main armhf libxext-dev armhf 2:1.3.3-1+b2 [102 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf x11-common all 1:7.7+19 [251 kB]
Get:149 http://172.17.0.1/private buster-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libsm6 armhf 2:1.2.2-1+b3 [31.2 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf libice-dev armhf 2:1.0.9-2 [58.8 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf libsm-dev armhf 2:1.2.2-1+b3 [33.4 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libpixman-1-dev armhf 0.36.0-1 [477 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libxcb-render0-dev armhf 1.13.1-2 [111 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0-dev armhf 1.13.1-2 [100 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libcairo2-dev armhf 1.16.0-2 [620 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.35.1-1 [70.8 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.62.0-1 [286 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf libcurl4-openssl-dev armhf 7.62.0-1 [359 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf libfribidi-dev armhf 1.0.5-3 [98.9 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-bin armhf 2.38.0+dfsg-7 [22.9 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-dev armhf 2.38.0+dfsg-7 [49.2 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libgraphite2-dev armhf 1.3.12-1 [22.6 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.3.0-1 [817 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-5 [8845 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-dev armhf 2.3.0-1 [1232 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf libxft-dev armhf 2.3.2-2 [60.3 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf pango1.0-tools armhf 1.42.4-6 [53.1 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf libpango1.0-dev armhf 1.42.4-6 [139 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf x11proto-xinerama-dev all 2018.4-4 [3132 B]
Get:174 http://172.17.0.1/private buster-staging/main armhf libxinerama-dev armhf 2:1.1.4-1 [18.6 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf x11proto-fixes-dev all 1:2018.4-4 [3140 B]
Get:176 http://172.17.0.1/private buster-staging/main armhf libxfixes-dev armhf 1:5.0.3-1 [22.7 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf libxi-dev armhf 2:1.7.9-1 [236 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf x11proto-randr-dev all 2018.4-4 [3132 B]
Get:179 http://172.17.0.1/private buster-staging/main armhf libxrandr-dev armhf 2:1.5.1-1 [42.5 kB]
Get:180 http://172.17.0.1/private buster-staging/main armhf libxcursor-dev armhf 1:1.1.15-2 [41.1 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf x11proto-composite-dev all 1:2018.4-4 [3140 B]
Get:182 http://172.17.0.1/private buster-staging/main armhf libxcomposite-dev armhf 1:0.4.4-2 [19.8 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf x11proto-damage-dev all 1:2018.4-4 [3140 B]
Get:184 http://172.17.0.1/private buster-staging/main armhf libxdamage-dev armhf 1:1.1.4-3 [13.9 kB]
Get:185 http://172.17.0.1/private buster-staging/main armhf libxml2-utils armhf 2.9.4+dfsg1-7+b1 [96.1 kB]
Get:186 http://172.17.0.1/private buster-staging/main armhf libgtk2.0-dev armhf 2.24.32-3 [2331 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf libsqlite3-dev armhf 3.26.0+fossilbc891ac6b-1 [680 kB]
Get:188 http://172.17.0.1/private buster-staging/main armhf libjsoncpp1 armhf 1.7.4-3 [66.2 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf libjsoncpp-dev armhf 1.7.4-3 [78.6 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up python3-minimal (3.7.1-3) ...
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Setting up libarchive-zip-perl (1.64-1) ...
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Setting up mime-support (3.61) ...
Installing new version of config file /etc/mime.types ...
Setting up libicu63:armhf (63.1-5) ...
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Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libpthread-stubs0-dev:armhf (0.3-4) ...
Setting up fonts-dejavu-core (2.37-1) ...
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Setting up libelf1:armhf (0.175-2) ...
Setting up libglib2.0-0:armhf (2.58.2-3) ...
No schema files found: doing nothing.
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Setting up uuid-dev:armhf (2.33-0.2) ...
Setting up d-shlibs (0.83) ...
Setting up libffi-dev:armhf (3.2.1-9) ...
Setting up libgdk-pixbuf2.0-common (2.38.0+dfsg-7) ...
Setting up libdatrie1:armhf (0.2.12-1) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up libpipeline1:armhf (1.5.0-2) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ...
Setting up m4 (1.4.18-2) ...
Setting up libbsd0:armhf (0.9.1-1) ...
Setting up ucf (3.0038+nmu1) ...
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Setting up libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up x11proto-dev (2018.4-4) ...
Setting up libfreetype6:armhf (2.9.1-3) ...
Setting up libmagic-mgc (1:5.34-2) ...
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Setting up libgraphite2-3:armhf (1.3.12-1) ...
Setting up libcroco3:armhf (0.6.12-3) ...
Setting up libatk1.0-data (2.30.0-2) ...
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Setting up xtrans-dev (1.3.5-1) ...
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Setting up libssh2-1:armhf (1.8.0-2) ...
Setting up libglib2.0-data (2.58.2-3) ...
Processing triggers for libc-bin (2.28-2) ...
Setting up dwz (0.12-3) ...
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Setting up libpcre32-3:armhf (2:8.39-11+rpi1) ...
Setting up icu-devtools (63.1-5) ...
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Setting up libthai-data (0.1.28-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libglib2.0-bin (2.58.2-3) ...
Setting up libgraphite2-dev:armhf (1.3.12-1) ...
Setting up x11proto-input-dev (2018.4-4) ...
Setting up x11proto-composite-dev (1:2018.4-4) ...
Setting up libx11-data (2:1.6.7-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-9) ...
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Setting up liblzo2-2:armhf (2.10-0.1) ...
Setting up libavahi-common-data:armhf (0.7-4+b1) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ...
Setting up libfile-stripnondeterminism-perl (1.0.0-1) ...
Setting up libjsoncpp1:armhf (1.7.4-3) ...
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Setting up libpcre3-dev:armhf (2:8.39-11+rpi1) ...
Setting up gir1.2-atk-1.0:armhf (2.30.0-2) ...
Setting up libpython3.7-stdlib:armhf (3.7.2-1) ...
Setting up fontconfig-config (2.13.1-2) ...
Setting up x11proto-core-dev (2018.4-4) ...
Setting up gettext (0.19.8.1-9) ...
Setting up groff-base (1.22.4-1) ...
Setting up x11proto-fixes-dev (1:2018.4-4) ...
Setting up libcurl4:armhf (7.62.0-1) ...
Setting up libblkid-dev:armhf (2.33-0.2) ...
Setting up libxml2-utils (2.9.4+dfsg1-7+b1) ...
Setting up libharfbuzz0b:armhf (2.3.0-1) ...
Setting up libtiff5:armhf (4.0.10-3) ...
Setting up libxau-dev:armhf (1:1.0.8-1+b2) ...
Setting up python3.7 (3.7.2-1) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.28-1) ...
Setting up libicu-dev (63.1-5) ...
Setting up file (1:5.34-2) ...
Setting up intltool-debian (0.35.0+20060710.4) ...
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Setting up libfribidi-dev (1.0.5-3) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up man-db (2.8.4-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libavahi-common3:armhf (0.7-4+b1) ...
Setting up libpng-dev:armhf (1.6.34-2+rpi1) ...
Setting up libmount-dev:armhf (2.33-0.2) ...
Setting up libselinux1-dev:armhf (2.8-1+b1) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libharfbuzz-gobject0:armhf (2.3.0-1) ...
Setting up libcurl4-openssl-dev:armhf (7.62.0-1) ...
Setting up libtool (2.4.6-6) ...
Setting up libpython3-stdlib:armhf (3.7.1-3) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up libharfbuzz-icu0:armhf (2.3.0-1) ...
Setting up po-debconf (1.0.21) ...
Setting up python3 (3.7.1-3) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up gir1.2-harfbuzz-0.0:armhf (2.3.0-1) ...
Setting up libfreetype6-dev:armhf (2.9.1-3) ...
Setting up libice-dev:armhf (2:1.0.9-2) ...
Setting up libxcomposite1:armhf (1:0.4.4-2) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libxcb1-dev:armhf (1.13.1-2) ...
Setting up libavahi-client3:armhf (0.7-4+b1) ...
Setting up libx11-dev:armhf (2:1.6.7-1) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up python3-lib2to3 (3.7.1-1) ...
Setting up python3-distutils (3.7.1-1) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libcups2:armhf (2.2.10-3) ...
Setting up libfontconfig1-dev:armhf (2.13.1-2) ...
Setting up libsm-dev:armhf (2:1.2.2-1+b3) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up libglib2.0-dev-bin (2.58.2-3) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
Setting up libxcb-shm0-dev:armhf (1.13.1-2) ...
Setting up libgdk-pixbuf2.0-bin (2.38.0+dfsg-7) ...
Setting up gir1.2-gdkpixbuf-2.0:armhf (2.38.0+dfsg-7) ...
Setting up libxrender-dev:armhf (1:0.9.10-1) ...
Setting up libglib2.0-dev:armhf (2.58.2-3) ...
Setting up libxcb-render0-dev:armhf (1.13.1-2) ...
Setting up libxft-dev:armhf (2.3.2-2) ...
Setting up gtk-update-icon-cache (3.24.2-3) ...
Setting up libgdk-pixbuf2.0-dev:armhf (2.38.0+dfsg-7) ...
Setting up libxcursor1:armhf (1:1.1.15-2) ...
Setting up libxext-dev:armhf (2:1.3.3-1+b2) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up libxfixes-dev:armhf (1:5.0.3-1) ...
Setting up libharfbuzz-dev:armhf (2.3.0-1) ...
Setting up libxrandr2:armhf (2:1.5.1-1) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libcairo2:armhf (1.16.0-2) ...
Setting up libxinerama1:armhf (2:1.1.4-1) ...
Setting up libxcursor-dev:armhf (1:1.1.15-2) ...
Setting up libxdamage1:armhf (1:1.1.4-3) ...
Setting up libxrandr-dev:armhf (2:1.5.1-1) ...
Setting up libxcomposite-dev:armhf (1:0.4.4-2) ...
Setting up libcairo-script-interpreter2:armhf (1.16.0-2) ...
Setting up libcairo-gobject2:armhf (1.16.0-2) ...
Setting up libxdamage-dev:armhf (1:1.1.4-3) ...
Setting up libatk1.0-dev:armhf (2.30.0-2) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up libxinerama-dev:armhf (2:1.1.4-1) ...
Setting up libxi-dev:armhf (2:1.7.9-1) ...
Setting up libcairo2-dev:armhf (1.16.0-2) ...
Setting up gir1.2-freedesktop:armhf (1.58.3-1) ...
Setting up libpangoxft-1.0-0:armhf (1.42.4-6) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up gir1.2-pango-1.0:armhf (1.42.4-6) ...
Setting up librsvg2-2:armhf (2.44.10-1+rpi1) ...
Setting up pango1.0-tools (1.42.4-6) ...
Setting up librsvg2-common:armhf (2.44.10-1+rpi1) ...
Setting up libpango1.0-dev:armhf (1.42.4-6) ...
Setting up adwaita-icon-theme (3.30.1-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libgtk2.0-0:armhf (2.24.32-3) ...
Setting up gir1.2-gtk-2.0:armhf (2.24.32-3) ...
Setting up libgtk2.0-dev:armhf (2.24.32-3) ...
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.0.0-1) ...
Setting up debhelper (12) ...
Setting up sbuild-build-depends-seqtools-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-2) ...
Processing triggers for systemd (240-2+rpi1) ...
Processing triggers for libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.9.0-0.bpo.1-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-13+rpi1 gcc-8_8.2.0-13+rpi1 libc6-dev_2.28-2 libstdc++-8-dev_8.2.0-13+rpi1 libstdc++6_8.2.0-13+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 adwaita-icon-theme_3.30.1-1 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.33-0.2 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-13+rpi1 d-shlibs_0.83 dash_0.5.10.2-4 debconf_1.5.69 debhelper_12 debianutils_4.8.6 dh-autoreconf_19 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 dmsetup_2:1.02.145-4.1+b5 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33-0.2 file_1:5.34-2 findutils_4.6.0+git+20181018-1 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-13+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-13+rpi1 gcc-8-base_8.2.0-13+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gir1.2-atk-1.0_2.30.0-2 gir1.2-freedesktop_1.58.3-1 gir1.2-gdkpixbuf-2.0_2.38.0+dfsg-7 gir1.2-glib-2.0_1.58.3-1 gir1.2-gtk-2.0_2.24.32-3 gir1.2-harfbuzz-0.0_2.3.0-1 gir1.2-pango-1.0_1.42.4-6 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.1-3 groff-base_1.22.4-1 gtk-update-icon-cache_3.24.2-3 gzip_1.9-2.1 hicolor-icon-theme_0.17-2 hostname_3.21 icu-devtools_63.1-5 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-2 krb5-locales_1.16.2-1 libacl1_2.2.52-3 libapparmor1_2.13.1-3+b1 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.1 libasan5_8.2.0-13+rpi1 libassuan0_2.5.2-1 libatk1.0-0_2.30.0-2 libatk1.0-data_2.30.0-2 libatk1.0-dev_2.30.0-2 libatomic1_8.2.0-13+rpi1 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-11+rpi1 libblkid-dev_2.33-0.2 libblkid1_2.33-0.2 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-2 libc-dev-bin_2.28-2 libc6_2.28-2 libc6-dev_2.28-2 libcairo-gobject2_1.16.0-2 libcairo-script-interpreter2_1.16.0-2 libcairo2_1.16.0-2 libcairo2-dev_1.16.0-2 libcap-ng0_0.7.9-1+b1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-13+rpi1 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.6-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.10-3 libcurl4_7.62.0-1 libcurl4-openssl-dev_7.62.0-1 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.12-1 libdebconfclient0_0.246 libdevmapper1.02.1_2:1.02.145-4.1+b5 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libelf1_0.175-2 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33-0.2 libffi-dev_3.2.1-9 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.0.0-1 libfontconfig1_2.13.1-2 libfontconfig1-dev_2.13.1-2 libfreetype6_2.9.1-3 libfreetype6-dev_2.9.1-3 libfribidi-dev_1.0.5-3 libfribidi0_1.0.5-3 libgcc-8-dev_8.2.0-13+rpi1 libgcc1_1:8.2.0-13+rpi1 libgcrypt20_1.8.4-4 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgdk-pixbuf2.0-0_2.38.0+dfsg-7 libgdk-pixbuf2.0-bin_2.38.0+dfsg-7 libgdk-pixbuf2.0-common_2.38.0+dfsg-7 libgdk-pixbuf2.0-dev_2.38.0+dfsg-7 libgirepository-1.0-1_1.58.3-1 libglib2.0-0_2.58.2-3 libglib2.0-bin_2.58.2-3 libglib2.0-data_2.58.2-3 libglib2.0-dev_2.58.2-3 libglib2.0-dev-bin_2.58.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2+rpi1 libgomp1_8.2.0-13+rpi1 libgpg-error-l10n_1.33-3 libgpg-error0_1.33-3 libgraphite2-3_1.3.12-1 libgraphite2-dev_1.3.12-1 libgssapi-krb5-2_1.16.2-1 libgtk2.0-0_2.24.32-3 libgtk2.0-common_2.24.32-3 libgtk2.0-dev_2.24.32-3 libharfbuzz-dev_2.3.0-1 libharfbuzz-gobject0_2.3.0-1 libharfbuzz-icu0_2.3.0-1 libharfbuzz0b_2.3.0-1 libhogweed4_3.4.1~rc1-1 libice-dev_2:1.0.9-2 libice6_2:1.0.9-2 libicu-dev_63.1-5 libicu63_63.1-5 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libip4tc0_1.8.2-3 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libjsoncpp-dev_1.7.4-3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16.2-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-2 libkrb5-3_1.16.2-1 libkrb5support0_1.16.2-1 libksba8_1.3.5-2 libldap-2.4-2_2.4.47+dfsg-1 libldap-common_2.4.47+dfsg-1 liblz4-1_1.8.2-1+rpi1 liblzma5_5.2.2-1.3 liblzo2-2_2.10-0.1 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmount-dev_2.33-0.2 libmount1_2.33-0.2 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-2 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.35.1-1 libnpth0_1.6-1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam0g_1.1.8-3.8 libpango-1.0-0_1.42.4-6 libpango1.0-dev_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libpangoxft-1.0-0_1.42.4-6 libpcre16-3_2:8.39-11+rpi1 libpcre3_2:8.39-11+rpi1 libpcre3-dev_2:8.39-11+rpi1 libpcre32-3_2:8.39-11+rpi1 libpcrecpp0v5_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpixman-1-0_0.36.0-1 libpixman-1-dev_0.36.0-1 libplymouth4_0.9.4-1 libpng-dev_1.6.34-2+rpi1 libpng16-16_1.6.34-2+rpi1 libprocps7_2:3.3.15-2 libpsl5_0.20.2-2 libpthread-stubs0-dev_0.3-4 libpython3-stdlib_3.7.1-3 libpython3.7-minimal_3.7.2-1 libpython3.7-stdlib_3.7.2-1 libreadline7_7.0-5 librsvg2-2_2.44.10-1+rpi1 librsvg2-common_2.44.10-1+rpi1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3+b1 libselinux1_2.8-1+b1 libselinux1-dev_2.8-1+b1 libsemanage-common_2.8-1 libsemanage1_2.8-1+b1 libsepol1_2.8-1 libsepol1-dev_2.8-1 libsigsegv2_2.12-2 libsm-dev_2:1.2.2-1+b3 libsm6_2:1.2.2-1+b3 libsmartcols1_2.33-0.2 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libsqlite3-dev_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-13+rpi1 libstdc++6_8.2.0-13+rpi1 libsystemd0_240-2+rpi1 libtasn1-6_4.13-3 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtool_2.4.6-6 libubsan1_8.2.0-13+rpi1 libuchardet0_0.0.6-3 libudev1_240-2+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33-0.2 libwebp6_0.6.1-2 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx11-dev_2:1.6.7-1 libxau-dev_1:1.0.8-1+b2 libxau6_1:1.0.8-1+b2 libxcb-render0_1.13.1-2 libxcb-render0-dev_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb-shm0-dev_1.13.1-2 libxcb1_1.13.1-2 libxcb1-dev_1.13.1-2 libxcomposite-dev_1:0.4.4-2 libxcomposite1_1:0.4.4-2 libxcursor-dev_1:1.1.15-2 libxcursor1_1:1.1.15-2 libxdamage-dev_1:1.1.4-3 libxdamage1_1:1.1.4-3 libxdmcp-dev_1:1.1.2-3 libxdmcp6_1:1.1.2-3 libxext-dev_2:1.3.3-1+b2 libxext6_2:1.3.3-1+b2 libxfixes-dev_1:5.0.3-1 libxfixes3_1:5.0.3-1 libxft-dev_2.3.2-2 libxft2_2.3.2-2 libxi-dev_2:1.7.9-1 libxi6_2:1.7.9-1 libxinerama-dev_2:1.1.4-1 libxinerama1_2:1.1.4-1 libxml2_2.9.4+dfsg1-7+b1 libxml2-utils_2.9.4+dfsg1-7+b1 libxrandr-dev_2:1.5.1-1 libxrandr2_2:1.5.1-1 libxrender-dev_1:0.9.10-1 libxrender1_1:0.9.10-1 libzstd1_1.3.5+dfsg-2+rpi1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.4-3 mawk_1.3.3-17 mime-support_3.61 mount_2.33-0.2 multiarch-support_2.28-2 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 pango1.0-tools_1.42.4-6 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1 pkg-config_0.29-4 plymouth_0.9.4-1 po-debconf_1.0.21 procps_2:3.3.15-2 python3_3.7.1-3 python3-distutils_3.7.1-1 python3-lib2to3_3.7.1-1 python3-minimal_3.7.1-3 python3.7_3.7.2-1 python3.7-minimal_3.7.2-1 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-seqtools-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 shared-mime-info_1.10-1 systemd_240-2+rpi1 sysvinit-utils_2.93-2 tar_1.30+dfsg-3+rpi1 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-2+rpi1 util-linux_2.33-0.2 uuid-dev_2.33-0.2 x11-common_1:7.7+19 x11proto-composite-dev_1:2018.4-4 x11proto-core-dev_2018.4-4 x11proto-damage-dev_1:2018.4-4 x11proto-dev_2018.4-4 x11proto-fixes-dev_1:2018.4-4 x11proto-input-dev_2018.4-4 x11proto-randr-dev_2018.4-4 x11proto-xext-dev_2018.4-4 x11proto-xinerama-dev_2018.4-4 xorg-sgml-doctools_1:1.11-1 xtrans-dev_1.3.5-1 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Jan 3 14:41:49 2019 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./seqtools_4.44.1+dfsg-3.dsc
dpkg-source: info: extracting seqtools in /<<BUILDDIR>>/seqtools-4.44.1+dfsg
dpkg-source: info: unpacking seqtools_4.44.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking seqtools_4.44.1+dfsg-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying dynamic-lib.patch
dpkg-source: info: applying prevent_usage_of_blatsrc.patch
dpkg-source: info: applying use_debian_packaged_jsoncpp.patch
dpkg-source: info: applying fix_missing_includes.patch
dpkg-source: info: applying spelling.patch
dpkg-source: info: applying ksh2sh.patch
Check disc space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-e7c67d9c-ff75-4f4f-9de5-bc32dcdccb26
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package seqtools
dpkg-buildpackage: info: source version 4.44.1+dfsg-3
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean
dh_clean
debian/rules build-arch
dh build-arch
dh_update_autotools_config -a
dh_autoreconf -a
configure.ac:39: warning: Unknown LT_INIT option `libtool'
configure.ac:39: warning: Unknown LT_INIT option `libtool'
configure.ac:39: warning: Unknown LT_INIT option `libtool'
libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'config'.
libtoolize: copying file 'config/ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltsugar.m4'
libtoolize: copying file 'm4/ltversion.m4'
libtoolize: copying file 'm4/lt~obsolete.m4'
configure.ac:39: warning: Unknown LT_INIT option 'libtool'
configure.ac:39: warning: Unknown LT_INIT option 'libtool'
configure.ac:39: warning: Unknown LT_INIT option 'libtool'
configure.ac:39: warning: Unknown LT_INIT option 'libtool'
configure.ac:39: warning: Unknown LT_INIT option 'libtool'
configure.ac:39: installing 'config/compile'
configure.ac:10: installing 'config/missing'
src/gbtoolsCurl/Makefile.am: installing 'config/depcomp'
dh_auto_configure -a
./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of g++... none
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking how to run the C preprocessor... gcc -E
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for ranlib... ranlib
checking for glib-genmarshal... glib-genmarshal
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for unistd.h... (cached) yes
checking gtk.h usability... no
checking gtk.h presence... no
checking for gtk.h... no
checking sqlite3.h usability... yes
checking sqlite3.h presence... yes
checking for sqlite3.h... yes
checking for pid_t... yes
checking for size_t... yes
checking vfork.h usability... no
checking vfork.h presence... no
checking for vfork.h... no
checking for fork... yes
checking for vfork... yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking for dup2... yes
checking for floor... no
checking for gethostbyname... yes
checking for memset... yes
checking for socket... yes
checking for sqrt... no
checking for strcasecmp... yes
checking for strchr... yes
checking for strcspn... yes
checking for strerror... yes
checking for strncasecmp... yes
checking for strrchr... yes
checking for strstr... yes
checking for strtol... yes
checking for uname... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for DEPS... yes
checking for DEPS_SQLITE3... yes
checking curl/curl.h usability... yes
checking curl/curl.h presence... yes
checking for curl/curl.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating blixemApp/Makefile
config.status: creating dotterApp/Makefile
config.status: creating belvuApp/Makefile
config.status: creating seqtoolsUtils/Makefile
config.status: creating doc/Makefile
config.status: creating doc/User_doc/Makefile
config.status: creating doc/Design_notes/Makefile
config.status: creating doc/Design_notes/modules/Makefile
config.status: creating examples/Makefile
config.status: creating test/Makefile
config.status: creating test/data/Makefile
config.status: creating test/scripts/Makefile
config.status: creating test/scripts/automated/Makefile
config.status: creating test/scripts/automated/belvu/Makefile
config.status: creating test/scripts/automated/blixem/Makefile
config.status: creating test/scripts/automated/dotter/Makefile
config.status: creating test/scripts/manual/Makefile
config.status: creating test/scripts/manual/belvu/Makefile
config.status: creating test/scripts/manual/blixem/Makefile
config.status: creating test/scripts/manual/dotter/Makefile
config.status: creating config.h
config.status: executing depfiles commands
=== configuring in gbtools (/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools)
configure: running /bin/bash ./configure --disable-option-checking '--prefix=/usr' '--build=arm-linux-gnueabihf' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--disable-silent-rules' '--libdir=${prefix}/lib/arm-linux-gnueabihf' '--libexecdir=${prefix}/lib/arm-linux-gnueabihf' '--runstatedir=/run' '--disable-maintainer-mode' '--disable-dependency-tracking' 'build_alias=arm-linux-gnueabihf' 'CXXFLAGS=-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now' 'CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2' 'CFLAGS=-g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' --cache-file=/dev/null --srcdir=.
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... no
checking for mawk... mawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... arm-unknown-linux-gnueabihf
checking host system type... arm-unknown-linux-gnueabihf
checking how to print strings... printf
checking whether make supports the include directive... yes (GNU style)
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for fgrep... /bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop
checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... mt
checking if mt is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... yes
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to run the C preprocessor... gcc -E
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++ accepts -g... (cached) yes
checking dependency style of g++... (cached) none
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for unistd.h... (cached) yes
checking gtk.h usability... no
checking gtk.h presence... no
checking for gtk.h... no
checking for pid_t... yes
checking for size_t... yes
checking vfork.h usability... no
checking vfork.h presence... no
checking for vfork.h... no
checking for fork... yes
checking for vfork... yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for dup2... yes
checking for floor... no
checking for gethostbyname... yes
checking for memset... yes
checking for socket... yes
checking for sqrt... no
checking for strcasecmp... yes
checking for strchr... yes
checking for strcspn... yes
checking for strerror... yes
checking for strncasecmp... yes
checking for strrchr... yes
checking for strstr... yes
checking for strtol... yes
checking for uname... yes
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for DEPS... yes
checking for glib-genmarshal... glib-genmarshal
checking curl/curl.h usability... yes
checking curl/curl.h presence... yes
checking for curl/curl.h... yes
checking stdio.h usability... yes
checking stdio.h presence... yes
checking for stdio.h... yes
checking for stdlib.h... (cached) yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking for sys/types.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for strings.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking assert.h usability... yes
checking assert.h presence... yes
checking for assert.h... yes
checking setjmp.h usability... yes
checking setjmp.h presence... yes
checking for setjmp.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking math.h usability... yes
checking math.h presence... yes
checking for math.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for unistd.h... (cached) yes
checking libgen.h usability... yes
checking libgen.h presence... yes
checking for libgen.h... yes
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking mingw/math.h usability... no
checking mingw/math.h presence... no
checking for mingw/math.h... no
checking for sys/socket.h... (cached) yes
checking for netinet/in.h... (cached) yes
checking for arpa/inet.h... (cached) yes
checking for netdb.h... (cached) yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking regex.h usability... yes
checking regex.h presence... yes
checking for regex.h... yes
checking signal.h usability... yes
checking signal.h presence... yes
checking for signal.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking syslog.h usability... yes
checking syslog.h presence... yes
checking for syslog.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking termios.h usability... yes
checking termios.h presence... yes
checking for termios.h... yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking io.h usability... no
checking io.h presence... no
checking for io.h... no
checking direct.h usability... no
checking direct.h presence... no
checking for direct.h... no
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking sys/file.h usability... yes
checking sys/file.h presence... yes
checking for sys/file.h... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking for execinfo.h... (cached) yes
Got OS type of LINUX
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating src/Makefile
config.status: creating src/include/Makefile
config.status: creating src/gbtoolsUtils/Makefile
config.status: creating src/gbtoolsGUI/Makefile
config.status: creating src/gbtoolsCurl/Makefile
config.status: creating src/gbtoolsTrackhub/Makefile
config.status: creating src/gbtoolsPfetch/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
-------------------------------------------------
gbtools Version 0.6.4
Prefix: '/usr'
Compiler: 'g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2'
Now type 'make [<target>]'
where the optional [<target>] is:
all - build all libraries (default)
install - build and install everything
Warning: Dependencies not found for Bed/bigBed/bigWig support
-------------------------------------------------
-------------------------------------------------
SeqTools Version 4.44.1
Prefix: '/usr'
Compiler: 'gcc -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2'
Now type 'make [<target>]'
where the optional [<target>] is:
all - build all binaries (default)
install - build and install everything
<program> - build specific program
-------------------------------------------------
dh_auto_build -a
make -j4
make[1]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
make all-recursive
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
Making all in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
Making all in gbtools
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make all-recursive
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
Making all in src
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
Making all in include
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/include'
make[6]: Nothing to be done for 'all'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/include'
Making all in gbtoolsUtils
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
Making all in .
make[7]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gbtoolsUtils.lo gbtoolsUtils.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gbtoolsUtils.cpp -fPIC -DPIC -o .libs/gbtoolsUtils.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gbtoolsUtils.cpp -o gbtoolsUtils.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libgbtoolsUtils.la gbtoolsUtils.lo
libtool: link: ar cru .libs/libgbtoolsUtils.a .libs/gbtoolsUtils.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libgbtoolsUtils.a
libtool: link: ( cd ".libs" && rm -f "libgbtoolsUtils.la" && ln -s "../libgbtoolsUtils.la" "libgbtoolsUtils.la" )
make[7]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
Making all in gbtoolsGUI
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
Making all in .
make[7]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gbtoolsGUI.lo gbtoolsGUI.cpp
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gbtoolsGUI.cpp -fPIC -DPIC -o .libs/gbtoolsGUI.o
libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c gbtoolsGUI.cpp -o gbtoolsGUI.o >/dev/null 2>&1
/bin/bash ../../libtool --tag=CXX --mode=link g++ -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o libgbtoolsGUI.la gbtoolsGUI.lo
libtool: link: ar cru .libs/libgbtoolsGUI.a .libs/gbtoolsGUI.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libgbtoolsGUI.a
libtool: link: ( cd ".libs" && rm -f "libgbtoolsGUI.la" && ln -s "../libgbtoolsGUI.la" "libgbtoolsGUI.la" )
make[7]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
Making all in gbtoolsCurl
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
Making all in .
make[7]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
/bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I../../src/include -I/usr/include/jsoncpp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o gbtoolsCurl.lo gbtoolsCurl.cpp
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gbtoolsPfetchHttp.cpp: In member function 'virtual bool gbtools::PfetchHttp::fetch(const char*, char**)':
gbtoolsPfetchHttp.cpp:160:18: warning: variable 'result' set but not used [-Wunused-but-set-variable]
bool result ;
^~~~~~
gbtoolsPfetchPipe.cpp: In function 'gboolean gbtools::timeout_pfetch_process(gpointer)':
gbtoolsPfetchPipe.cpp:439:12: warning: variable 'call_again' set but not used [-Wunused-but-set-variable]
bool call_again ;
^~~~~~~~~~
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gbtoolsTrackhub.cpp: In member function 'std::map<std::__cxx11::basic_string<char>, std::__cxx11::list<std::__cxx11::basic_string<char> > > gbtools::trackhub::Registry::assemblies(std::__cxx11::string&)':
gbtoolsTrackhub.cpp:586:8: warning: variable 'ok' set but not used [-Wunused-but-set-variable]
bool ok = true;
^~
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libtool: link: gcc -shared -fPIC -DPIC -Wl,--whole-archive src/gbtoolsGUI/.libs/libgbtoolsGUI.a src/gbtoolsUtils/.libs/libgbtoolsUtils.a src/gbtoolsCurl/.libs/libgbtoolsCurl.a src/gbtoolsPfetch/.libs/libgbtoolsPfetch.a src/gbtoolsTrackhub/.libs/libgbtoolsTrackhub.a -Wl,--no-whole-archive -ljsoncpp -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libgbtools.so.0 -o .libs/libgbtools.so.0.0.0
libtool: link: (cd ".libs" && rm -f "libgbtools.so.0" && ln -s "libgbtools.so.0.0.0" "libgbtools.so.0")
libtool: link: (cd ".libs" && rm -f "libgbtools.so" && ln -s "libgbtools.so.0.0.0" "libgbtools.so")
libtool: link: (cd .libs/libgbtools.lax/libgbtoolsGUI.a && ar x "/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI/.libs/libgbtoolsGUI.a")
libtool: link: (cd .libs/libgbtools.lax/libgbtoolsUtils.a && ar x "/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils/.libs/libgbtoolsUtils.a")
libtool: link: (cd .libs/libgbtools.lax/libgbtoolsCurl.a && ar x "/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl/.libs/libgbtoolsCurl.a")
libtool: link: (cd .libs/libgbtools.lax/libgbtoolsPfetch.a && ar x "/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch/.libs/libgbtoolsPfetch.a")
libtool: link: (cd .libs/libgbtools.lax/libgbtoolsTrackhub.a && ar x "/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub/.libs/libgbtoolsTrackhub.a")
libtool: link: ar cru .libs/libgbtools.a .libs/libgbtools.lax/libgbtoolsGUI.a/gbtoolsGUI.o .libs/libgbtools.lax/libgbtoolsUtils.a/gbtoolsUtils.o .libs/libgbtools.lax/libgbtoolsCurl.a/gbtoolsCurl.o .libs/libgbtools.lax/libgbtoolsPfetch.a/gbtoolsPfetch.o .libs/libgbtools.lax/libgbtoolsPfetch.a/gbtoolsPfetchHttp.o .libs/libgbtools.lax/libgbtoolsPfetch.a/gbtoolsPfetchPipe.o .libs/libgbtools.lax/libgbtoolsTrackhub.a/gbtoolsTrackhub.o
ar: `u' modifier ignored since `D' is the default (see `U')
libtool: link: ranlib .libs/libgbtools.a
libtool: link: rm -fr .libs/libgbtools.lax
libtool: link: ( cd ".libs" && rm -f "libgbtools.la" && ln -s "../libgbtools.la" "libgbtools.la" )
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
Making all in seqtoolsUtils
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
Making all in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utilities.o utilities.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blxmsp.o blxmsp.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o translate.o translate.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o seqtoolsWebBrowser.o seqtoolsWebBrowser.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blxGff3Parser.o blxGff3Parser.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blxparser.o blxparser.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o seqtoolsFetch.o seqtoolsFetch.cpp
rm -f libSeqtoolsUtils.a
ar cru libSeqtoolsUtils.a utilities.o blxmsp.o translate.o seqtoolsWebBrowser.o blxGff3Parser.o blxparser.o seqtoolsFetch.o
ar: `u' modifier ignored since `D' is the default (see `U')
ranlib libSeqtoolsUtils.a
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
Making all in dotterApp
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
Making all in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dotterMain.o dotterMain.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o greyramptool.o greyramptool.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o alignmenttool.o alignmenttool.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dotplot.o dotplot.cpp
dotterMain.cpp:292:40: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../dotterApp/dotter_.hpp:42,
from dotterMain.cpp:38:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../dotterApp/dotter_.hpp:70:63: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define DOTTER_VERSION_COMPILE DOTTER_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
dotterMain.cpp:169:12: note: in expansion of macro 'DOTTER_VERSION_COMPILE'
Version " DOTTER_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~~
dotterMain.cpp:292:40: note: in expansion of macro 'FOOTER_TEXT'
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
dotterMain.cpp:294:46: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s%s", USAGE_TEXT, FOOTER_TEXT);
^
dotterMain.cpp:294:46: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
dotterMain.cpp:306:43: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s\n", UT_MAKE_COMPILE_DATE());
^
dotterMain.cpp:306:43: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dotter.o dotter.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dotterKarlin.o dotterKarlin.cpp
dotter.cpp:4025:55: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
UT_MAKE_COMPILE_DATE(),
^
dotter.cpp:4025:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o seqtoolsExonView.o seqtoolsExonView.cpp
dotter.cpp: In function 'void readmtx(int (*)[24], char*)':
dotter.cpp:2802:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
fgets(line, 1024, fil);
~~~~~^~~~~~~~~~~~~~~~~
g++ -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o dotter dotterMain.o greyramptool.o alignmenttool.o dotplot.o dotter.o dotterKarlin.o seqtoolsExonView.o ../seqtoolsUtils/libSeqtoolsUtils.a -L../gbtools/.libs -lgbtools -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lpangoft2-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lfontconfig -lfreetype -ljsoncpp -lcurl
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
Making all in blixemApp
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
Making all in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxmain.o `test -f 'blxmain.cpp' || echo './'`blxmain.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxview.o `test -f 'blxview.cpp' || echo './'`blxview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxFetch.o `test -f 'blxFetch.cpp' || echo './'`blxFetch.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-sequencecellrenderer.o `test -f 'sequencecellrenderer.cpp' || echo './'`sequencecellrenderer.cpp
blxmain.cpp:404:40: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../blixemApp/blixem_.hpp:46,
from blxmain.cpp:44:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../blixemApp/blixem_.hpp:65:63: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define BLIXEM_VERSION_COMPILE BLIXEM_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
blxmain.cpp:196:12: note: in expansion of macro 'BLIXEM_VERSION_COMPILE'
Version " BLIXEM_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~~
blxmain.cpp:404:40: note: in expansion of macro 'FOOTER_TEXT'
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
blxmain.cpp:406:46: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s%s", USAGE_TEXT, FOOTER_TEXT);
^
blxmain.cpp:406:46: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
blxmain.cpp:419:30: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_string_append(resultStr, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../blixemApp/blixem_.hpp:46,
from blxmain.cpp:44:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../blixemApp/blixem_.hpp:65:63: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define BLIXEM_VERSION_COMPILE BLIXEM_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
blxmain.cpp:196:12: note: in expansion of macro 'BLIXEM_VERSION_COMPILE'
Version " BLIXEM_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~~
blxmain.cpp:419:30: note: in expansion of macro 'FOOTER_TEXT'
g_string_append(resultStr, FOOTER_TEXT);
^~~~~~~~~~~
blxmain.cpp:441:43: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s\n", UT_MAKE_COMPILE_DATE());
^
blxmain.cpp:441:43: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
blxview.cpp:1713:55: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
UT_MAKE_COMPILE_DATE(),
^
blxview.cpp:1713:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxpanel.o `test -f 'blxpanel.cpp' || echo './'`blxpanel.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-bigpicture.o `test -f 'bigpicture.cpp' || echo './'`bigpicture.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-bigpicturegrid.o `test -f 'bigpicturegrid.cpp' || echo './'`bigpicturegrid.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-detailview.o `test -f 'detailview.cpp' || echo './'`detailview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-detailviewtree.o `test -f 'detailviewtree.cpp' || echo './'`detailviewtree.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxwindow.o `test -f 'blxwindow.cpp' || echo './'`blxwindow.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-exonview.o `test -f 'exonview.cpp' || echo './'`exonview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-coverageview.o `test -f 'coverageview.cpp' || echo './'`coverageview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxdotter.o `test -f 'blxdotter.cpp' || echo './'`blxdotter.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxFetchDb.o `test -f 'blxFetchDb.cpp' || echo './'`blxFetchDb.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixem-blxcontext.o `test -f 'blxcontext.cpp' || echo './'`blxcontext.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxmain.o `test -f 'blxmain.cpp' || echo './'`blxmain.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxview.o `test -f 'blxview.cpp' || echo './'`blxview.cpp
blxmain.cpp:404:40: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../blixemApp/blixem_.hpp:46,
from blxmain.cpp:44:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../blixemApp/blixem_.hpp:65:63: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define BLIXEM_VERSION_COMPILE BLIXEM_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
blxmain.cpp:196:12: note: in expansion of macro 'BLIXEM_VERSION_COMPILE'
Version " BLIXEM_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~~
blxmain.cpp:404:40: note: in expansion of macro 'FOOTER_TEXT'
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
blxmain.cpp:406:46: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s%s", USAGE_TEXT, FOOTER_TEXT);
^
blxmain.cpp:406:46: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
blxmain.cpp:419:30: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_string_append(resultStr, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../blixemApp/blixem_.hpp:46,
from blxmain.cpp:44:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../blixemApp/blixem_.hpp:65:63: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define BLIXEM_VERSION_COMPILE BLIXEM_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
blxmain.cpp:196:12: note: in expansion of macro 'BLIXEM_VERSION_COMPILE'
Version " BLIXEM_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~~
blxmain.cpp:419:30: note: in expansion of macro 'FOOTER_TEXT'
g_string_append(resultStr, FOOTER_TEXT);
^~~~~~~~~~~
blxmain.cpp:441:43: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s\n", UT_MAKE_COMPILE_DATE());
^
blxmain.cpp:441:43: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxFetch.o `test -f 'blxFetch.cpp' || echo './'`blxFetch.cpp
blxview.cpp:1713:55: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
UT_MAKE_COMPILE_DATE(),
^
blxview.cpp:1713:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-sequencecellrenderer.o `test -f 'sequencecellrenderer.cpp' || echo './'`sequencecellrenderer.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxpanel.o `test -f 'blxpanel.cpp' || echo './'`blxpanel.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-bigpicture.o `test -f 'bigpicture.cpp' || echo './'`bigpicture.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-bigpicturegrid.o `test -f 'bigpicturegrid.cpp' || echo './'`bigpicturegrid.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-detailview.o `test -f 'detailview.cpp' || echo './'`detailview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-detailviewtree.o `test -f 'detailviewtree.cpp' || echo './'`detailviewtree.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxwindow.o `test -f 'blxwindow.cpp' || echo './'`blxwindow.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-exonview.o `test -f 'exonview.cpp' || echo './'`exonview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-coverageview.o `test -f 'coverageview.cpp' || echo './'`coverageview.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxdotter.o `test -f 'blxdotter.cpp' || echo './'`blxdotter.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxFetchDb.o `test -f 'blxFetchDb.cpp' || echo './'`blxFetchDb.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -DSQLITE3 -DPFETCH_HTML -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blixemh-blxcontext.o `test -f 'blxcontext.cpp' || echo './'`blxcontext.cpp
g++ -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o blixem blixem-blxmain.o blixem-blxview.o blixem-blxFetch.o blixem-sequencecellrenderer.o blixem-blxpanel.o blixem-bigpicture.o blixem-bigpicturegrid.o blixem-detailview.o blixem-detailviewtree.o blixem-blxwindow.o blixem-exonview.o blixem-coverageview.o blixem-blxdotter.o blixem-blxFetchDb.o blixem-blxcontext.o ../seqtoolsUtils/libSeqtoolsUtils.a -L../gbtools/.libs -lgbtools -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lpangoft2-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lfontconfig -lfreetype -ljsoncpp -lcurl -lsqlite3
g++ -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o blixemh blixemh-blxmain.o blixemh-blxview.o blixemh-blxFetch.o blixemh-sequencecellrenderer.o blixemh-blxpanel.o blixemh-bigpicture.o blixemh-bigpicturegrid.o blixemh-detailview.o blixemh-detailviewtree.o blixemh-blxwindow.o blixemh-exonview.o blixemh-coverageview.o blixemh-blxdotter.o blixemh-blxFetchDb.o blixemh-blxcontext.o ../seqtoolsUtils/libSeqtoolsUtils.a -L../gbtools/.libs -lgbtools -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lpangoft2-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lfontconfig -lfreetype -ljsoncpp -lcurl -lsqlite3
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
Making all in belvuApp
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
Making all in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o belvuMain.o belvuMain.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o belvu.o belvu.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o belvuWindow.o belvuWindow.cpp
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o belvuAlignment.o belvuAlignment.cpp
belvuMain.cpp:328:40: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../belvuApp/belvu_.hpp:43,
from belvuMain.cpp:38:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../belvuApp/belvu_.hpp:59:60: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define BELVU_VERSION_COMPILE BELVU_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
belvuMain.cpp:313:12: note: in expansion of macro 'BELVU_VERSION_COMPILE'
Version " BELVU_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~
belvuMain.cpp:328:40: note: in expansion of macro 'FOOTER_TEXT'
g_message_info("%s%s", USAGE_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
belvuMain.cpp:330:46: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s%s", USAGE_TEXT, FOOTER_TEXT);
^
belvuMain.cpp:330:46: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
belvuMain.cpp:339:39: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message_info("%s%s", HELP_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
In file included from ../belvuApp/belvu_.hpp:43,
from belvuMain.cpp:38:
../seqtoolsUtils/version.hpp:108:1: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
__TIME__ " " __DATE__
^~~~~~~~
../belvuApp/belvu_.hpp:59:60: note: in expansion of macro 'UT_MAKE_COMPILE_DATE'
#define BELVU_VERSION_COMPILE BELVU_VERSION_STRING " " UT_MAKE_COMPILE_DATE()
^~~~~~~~~~~~~~~~~~~~
belvuMain.cpp:313:12: note: in expansion of macro 'BELVU_VERSION_COMPILE'
Version " BELVU_VERSION_COMPILE "\n\
^~~~~~~~~~~~~~~~~~~~~
belvuMain.cpp:339:39: note: in expansion of macro 'FOOTER_TEXT'
g_message_info("%s%s", HELP_TEXT, FOOTER_TEXT);
^~~~~~~~~~~
belvuMain.cpp:341:45: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s%s", HELP_TEXT, FOOTER_TEXT);
^
belvuMain.cpp:341:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
belvuMain.cpp:353:43: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
g_message("%s\n", UT_MAKE_COMPILE_DATE());
^
belvuMain.cpp:353:43: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
belvu.cpp:2609:55: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time]
UT_MAKE_COMPILE_DATE(),
^
belvu.cpp:2609:55: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time]
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o belvuTree.o belvuTree.cpp
belvuAlignment.cpp: In function 'gboolean onExposeBelvuSequence(GtkWidget*, GdkEventExpose*, gpointer)':
belvuAlignment.cpp:665:44: warning: '%3d' directive writing between 3 and 10 bytes into a region of size 9 [-Wformat-overflow=]
sprintf(collapseStr, "[%3d]", collapseRes);
^~~~~~~
belvuAlignment.cpp:665:44: note: directive argument in the range [0, 2147483647]
In file included from /usr/include/stdio.h:873,
from /usr/include/pango-1.0/pango/pango-utils.h:25,
from /usr/include/pango-1.0/pango/pango.h:46,
from /usr/include/gtk-2.0/gdk/gdktypes.h:37,
from /usr/include/gtk-2.0/gdk/gdkscreen.h:32,
from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:31,
from /usr/include/gtk-2.0/gdk/gdk.h:32,
from /usr/include/gtk-2.0/gtk/gtk.h:32,
from ../seqtoolsUtils/utilities.hpp:41,
from ../belvuApp/belvu_.hpp:41,
from ../belvuApp/belvuAlignment.hpp:41,
from belvuAlignment.cpp:38:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 6 and 13 bytes into a destination of size 10
return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
__bos (__s), __fmt, __va_arg_pack ());
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -DHAVE_CONFIG_H -I. -I.. -pthread -I/usr/include/gtk-2.0 -I/usr/lib/arm-linux-gnueabihf/gtk-2.0/include -I/usr/include/gio-unix-2.0 -I/usr/include/cairo -I/usr/include/pango-1.0 -I/usr/include/atk-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/gdk-pixbuf-2.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/fribidi -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/jsoncpp -I.. -I../gbtools/src/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -c -o belvuConsPlot.o belvuConsPlot.cpp
g++ -std=c++11 -g -Wall -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/seqtools-4.44.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o belvu belvuMain.o belvu.o belvuWindow.o belvuAlignment.o belvuTree.o belvuConsPlot.o ../seqtoolsUtils/libSeqtoolsUtils.a -L../gbtools/.libs -lgbtools -lgtk-x11-2.0 -lgdk-x11-2.0 -lpangocairo-1.0 -latk-1.0 -lcairo -lgdk_pixbuf-2.0 -lgio-2.0 -lpangoft2-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lfontconfig -lfreetype -ljsoncpp -lcurl
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
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Making all in doc
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Making all in User_doc
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Making all in data
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dh_auto_test -a
make -j4 check VERBOSE=1
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Making check in .
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Making check in .
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make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
Making check in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
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make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
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make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
Making check in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
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make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
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make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
Making check in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
Making check in doc
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
Making check in User_doc
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
Making check in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
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make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
Making check in Design_notes
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
Making check in modules
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes/modules'
Making check in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes/modules'
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make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
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make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
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make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
Making check in test
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test'
Making check in data
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/data'
Making check in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/data'
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make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/data'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/data'
Making check in scripts
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts'
Making check in automated
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated'
Making check in belvu
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
Making check in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
make[6]: Nothing to be done for 'check-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
Making check in blixem
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/blixem'
Making check in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/blixem'
make[6]: Nothing to be done for 'check-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/blixem'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/blixem'
Making check in dotter
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/dotter'
Making check in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/dotter'
make[6]: Nothing to be done for 'check-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/dotter'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/dotter'
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated'
make[5]: Nothing to be done for 'check-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated'
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make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual'
Making check in belvu
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/belvu'
Making check in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/belvu'
make[6]: Nothing to be done for 'check-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/belvu'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/belvu'
Making check in blixem
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/blixem'
Making check in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/blixem'
make[6]: Nothing to be done for 'check-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/blixem'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/blixem'
Making check in dotter
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
Making check in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
make[6]: Nothing to be done for 'check-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual'
make[5]: Nothing to be done for 'check-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts'
make[4]: Nothing to be done for 'check-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts'
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test'
Making check in examples
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
Making check in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
make[3]: Nothing to be done for 'check-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
make[1]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch
dh_testroot -a
dh_prep -a
dh_auto_install -a
make -j4 install DESTDIR=/<<BUILDDIR>>/seqtools-4.44.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
Making install in .
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
make[3]: Nothing to be done for 'install-exec-am'.
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
Making install in gbtools
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
Making install in src
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
Making install in include
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/include'
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/include'
make[5]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/include'
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/include/gbtools'
/usr/bin/install -c -m 644 gbtools/gbtools.hpp gbtools/gbtoolsCurl.hpp gbtools/gbtoolsTrackhub.hpp gbtools/gbtoolsGUI.hpp gbtools/gbtoolsPfetch.hpp gbtools/gbtoolsUtils.hpp '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/include/gbtools'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/include'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/include'
Making install in gbtoolsUtils
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
Making install in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsUtils'
Making install in gbtoolsGUI
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
Making install in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsGUI'
Making install in gbtoolsCurl
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
Making install in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsCurl'
Making install in gbtoolsPfetch
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch'
Making install in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch'
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsPfetch'
Making install in gbtoolsTrackhub
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub'
Making install in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub'
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub'
make[6]: Nothing to be done for 'install-exec-am'.
make[6]: Nothing to be done for 'install-data-am'.
make[6]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src/gbtoolsTrackhub'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
make[5]: Nothing to be done for 'install-exec-am'.
make[5]: Nothing to be done for 'install-data-am'.
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools/src'
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
/bin/bash ./libtool --mode=install /usr/bin/install -c libgbtools.la '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf'
libtool: install: /usr/bin/install -c .libs/libgbtools.so.0.0.0 /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0
libtool: install: (cd /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libgbtools.so.0.0.0 libgbtools.so.0 || { rm -f libgbtools.so.0 && ln -s libgbtools.so.0.0.0 libgbtools.so.0; }; })
libtool: install: (cd /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libgbtools.so.0.0.0 libgbtools.so || { rm -f libgbtools.so && ln -s libgbtools.so.0.0.0 libgbtools.so; }; })
libtool: install: /usr/bin/install -c .libs/libgbtools.lai /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.la
libtool: install: /usr/bin/install -c .libs/libgbtools.a /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.a
libtool: install: chmod 644 /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.a
libtool: install: ranlib /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.a
libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/gbtools'
Making install in seqtoolsUtils
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
Making install in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
make[4]: Nothing to be done for 'install-exec-am'.
make[4]: Nothing to be done for 'install-data-am'.
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/seqtoolsUtils'
Making install in dotterApp
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
Making install in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c dotter '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/bin'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/dotterApp'
Making install in blixemApp
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
Making install in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c blixem blixemh '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/bin'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/blixemApp'
Making install in belvuApp
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
Making install in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
make[4]: Nothing to be done for 'install-data-am'.
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/bin'
/usr/bin/install -c belvu '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/bin'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
make[2]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/belvuApp'
Making install in doc
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
Making install in User_doc
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
Making install in .
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
make[5]: Nothing to be done for 'install-exec-am'.
/bin/mkdir -p '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/share/doc/seqtools'
/usr/bin/install -c -m 644 todo.html release_notes.html belvu_quick_start.html blixem_quick_start.html dotter_quick_start.html belvu_usage.txt blixem_usage.txt dotter_usage.txt Blixem_manual/Blixem_manual.pdf Dotter_manual/Dotter_manual.pdf Belvu_manual/Belvu_manual.pdf '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/share/doc/seqtools'
make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/User_doc'
Making install in Design_notes
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
Making install in modules
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes/modules'
Making install in .
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes/modules'
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make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
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make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc/Design_notes'
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/doc'
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Making install in test
make[2]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test'
Making install in data
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/data'
Making install in .
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make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/data'
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Making install in scripts
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts'
Making install in automated
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated'
Making install in belvu
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
Making install in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
make[7]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
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make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/belvu'
Making install in blixem
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Making install in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/blixem'
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make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/blixem'
Making install in dotter
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/dotter'
Making install in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated/dotter'
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make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/automated'
Making install in manual
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Making install in belvu
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Making install in .
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Making install in blixem
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make[5]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/blixem'
Making install in dotter
make[5]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
Making install in .
make[6]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
make[7]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
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make[7]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/test/scripts/manual/dotter'
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Making install in examples
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Making install in .
make[3]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
make[4]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
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make[4]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
make[3]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg/examples'
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make[1]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
dh_install
d-shlibmove --commit \
--multiarch \
--devunversioned \
--override s/libjsoncpp1-dev/libjsoncpp-dev/ \
--exclude-la \
--movedev debian/tmp/usr/include/* usr/include \
debian/tmp/usr/lib/*/*.so
Library package automatic movement utility
--> libjsoncpp-dev package exists.
set -e
install -d -m 755 debian/libgbtools-dev/usr/lib/arm-linux-gnueabihf
install -d -m 755 debian/libgbtools0/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.a debian/libgbtools-dev/usr/lib/arm-linux-gnueabihf
mv debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.so debian/libgbtools-dev/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.so.0 debian/libgbtools0/usr/lib/arm-linux-gnueabihf
mv /<<BUILDDIR>>/seqtools-4.44.1+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 debian/libgbtools0/usr/lib/arm-linux-gnueabihf
PKGDEV=libgbtools-dev
PKGSHL=libgbtools0
install -d -m 755 debian/libgbtools-dev/usr/include
mv debian/tmp/usr/include/gbtools debian/libgbtools-dev/usr/include
make[1]: Leaving directory '/<<BUILDDIR>>/seqtools-4.44.1+dfsg'
dh_installdocs -a
dh_installchangelogs -a
dh_installman -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol g_spawn_async_with_pipes used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol _ZSt19__throw_logic_errorPKc used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol g_strdup_printf used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol _ZNSt8ios_baseC2Ev used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol _ZNSo5flushEv used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol _ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE7reserveEj used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol _ZTVN10__cxxabiv120__si_class_type_infoE used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol _Znwj used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol g_value_get_boolean used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: symbol g_io_channel_get_flags used by debian/libgbtools0/usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0 found in none of the libraries
dpkg-shlibdeps: warning: 121 other similar warnings have been skipped (use -v to see them all)
dpkg-shlibdeps: warning: debian/dotter/usr/bin/dotter contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libfontconfig.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libcurl.so.4 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libjsoncpp.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libgio-2.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libfreetype.so.6 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libpangoft2-1.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libgdk_pixbuf-2.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/dotter/usr/bin/dotter was not linked against libatk-1.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libpangocairo-1.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libgdk_pixbuf-2.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libatk-1.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against ld-linux-armhf.so.3 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libgio-2.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libjsoncpp.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libfontconfig.so.1 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libpangoft2-1.0.so.0 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libfreetype.so.6 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/belvu/usr/bin/belvu was not linked against libcurl.so.4 (it uses none of the library's symbols)
dpkg-shlibdeps: warning: debian/blixem/usr/bin/blixem contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: debian/blixem/usr/bin/blixemh contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libgio-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against ld-linux-armhf.so.3 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libatk-1.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libjsoncpp.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libfontconfig.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libfreetype.so.6 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libpangoft2-1.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libcurl.so.4 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libgdk_pixbuf-2.0.so.0 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/blixem/usr/bin/blixem debian/blixem/usr/bin/blixemh were not linked against libpangocairo-1.0.so.0 (they use none of the library's symbols)
dh_installdeb -a
dh_gencontrol -a
dpkg-gencontrol: warning: Depends field of package libgbtools-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package libgbtools-dev: substitution variable ${devlibs:Depends} unused, but is defined
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'blixem-dbgsym' in '../blixem-dbgsym_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'belvu' in '../belvu_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'libgbtools0' in '../libgbtools0_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'libgbtools0-dbgsym' in '../libgbtools0-dbgsym_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'belvu-dbgsym' in '../belvu-dbgsym_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'libgbtools-dev' in '../libgbtools-dev_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'blixem' in '../blixem_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'dotter' in '../dotter_4.44.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'dotter-dbgsym' in '../dotter-dbgsym_4.44.1+dfsg-3_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../seqtools_4.44.1+dfsg-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-01-09T06:49:46Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
seqtools_4.44.1+dfsg-3_armhf.changes:
-------------------------------------
Format: 1.8
Date: Thu, 03 Jan 2019 15:28:58 +0100
Source: seqtools
Binary: libgbtools0 libgbtools-dev belvu blixem dotter
Architecture: armhf
Version: 4.44.1+dfsg-3
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
belvu - multiple sequence alignment viewer and phylogenetic tool
blixem - interactive browser of sequence alignments
dotter - detailed comparison of two genomic sequences
libgbtools-dev - library for visualising sequence alignments (devel)
libgbtools0 - library for visualising sequence alignments
Changes:
seqtools (4.44.1+dfsg-3) unstable; urgency=medium
.
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.3.0
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
belvu-dbgsym_4.44.1+dfsg-3_armhf.deb
------------------------------------
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377 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: belvu-dbgsym
Source: seqtools
Version: 4.44.1+dfsg-3
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Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
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Depends: belvu (= 4.44.1+dfsg-3)
Section: debug
Priority: optional
Description: debug symbols for belvu
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lrwxrwxrwx root/root 0 2019-01-03 14:28 ./usr/share/doc/belvu-dbgsym -> belvu
belvu_4.44.1+dfsg-3_armhf.deb
-----------------------------
new Debian package, version 2.0.
size 182860 bytes: control archive=1436 bytes.
2405 bytes, 44 lines control
317 bytes, 5 lines md5sums
Package: belvu
Source: seqtools
Version: 4.44.1+dfsg-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 327
Depends: libatk1.0-0 (>= 1.12.4), libc6 (>= 2.4), libcairo2 (>= 1.2.4), libcurl4 (>= 7.16.2), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgbtools0, libgcc1 (>= 1:3.5), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.22.0), libgtk2.0-0 (>= 2.12.0), libjsoncpp1 (>= 1.7.4), libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libpangoft2-1.0-0 (>= 1.14.0), libstdc++6 (>= 4.1.1)
Conflicts: acedb-other-belvu (<< 4.9.39+dfsg.02-2)
Replaces: acedb-other-belvu (<< 4.9.39+dfsg.02-2)
Provides: acedb-other-belvu
Section: science
Priority: optional
Homepage: http://www.sanger.ac.uk/science/tools/seqtools
Description: multiple sequence alignment viewer and phylogenetic tool
Belvu is a multiple sequence alignment viewer and phylogenetic tool with
an extensive set of user-configurable modes to color residues.
.
* View multiple sequence alignments.
* Residues can be coloured by conservation, with user-configurable
cutoffs and colours.
* Residues can be coloured by residue type (user-configurable).
* Colour schemes can be imported or exported.
* Swissprot (or PIR) entries can be fetched by double clicking.
* The position in the alignment can be easily tracked.
* Manual deletion of rows and columns.
* Automatic editing of rows and columns based on customisable criteria:
- removal of all-gap columns;
- removal of all gaps;
- removal of redundant sequences;
- removal of a column by a user-specified percentage of gaps;
- filtering of sequences by percent identity;
- removal of sequences by a user-specified percentage of gaps;
- removal of partial sequences (those starting or ending with
gaps); and
- removal of columns by conservation (with user-specified
upper/lower cutoffs).
* The alignment can be saved in Stockholm, Selex, MSF or FASTA format.
* Distance matrices between sequences can be generated using a variety
of distance metrics.
* Distance matrices can be imported or exported.
* Phylogenetic trees can be constructed based on various distance-based
tree reconstruction algorithms.
* Trees can be saved in New Hampshire format.
* Belvu can perform bootstrap phylogenetic reconstruction.
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blixem-dbgsym_4.44.1+dfsg-3_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 2292288 bytes: control archive=608 bytes.
422 bytes, 12 lines control
212 bytes, 2 lines md5sums
Package: blixem-dbgsym
Source: seqtools
Version: 4.44.1+dfsg-3
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Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 2478
Depends: blixem (= 4.44.1+dfsg-3)
Section: debug
Priority: optional
Description: debug symbols for blixem
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lrwxrwxrwx root/root 0 2019-01-03 14:28 ./usr/share/doc/blixem-dbgsym -> blixem
blixem_4.44.1+dfsg-3_armhf.deb
------------------------------
new Debian package, version 2.0.
size 286888 bytes: control archive=1336 bytes.
1846 bytes, 31 lines control
438 bytes, 7 lines md5sums
Package: blixem
Source: seqtools
Version: 4.44.1+dfsg-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 895
Depends: libatk1.0-0 (>= 1.12.4), libc6 (>= 2.4), libcairo2 (>= 1.2.4), libcurl4 (>= 7.16.2), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgbtools0, libgcc1 (>= 1:3.5), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.35.9), libgtk2.0-0 (>= 2.14.0), libjsoncpp1 (>= 1.7.4), libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libpangoft2-1.0-0 (>= 1.14.0), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 5.2)
Section: science
Priority: optional
Homepage: http://www.sanger.ac.uk/science/tools/seqtools
Description: interactive browser of sequence alignments
Blixem is an interactive browser of sequence alignments that have been
stacked up in a "master-slave" multiple alignment; it is not a 'true'
multiple alignment but a 'one-to-many' alignment.
.
* Overview section showing the positions of genes and alignments around
the alignment window
* Detail section showing the actual alignment of protein or nucleotide
sequences to the genomic DNA sequence.
* View alignments against both strands of the reference sequence.
* View sequences in nucleotide or protein mode; in protein mode, Blixem
will display the three-frame translation of the reference sequence.
* Residues are highlighted in different colours depending on whether
they are an exact match, conserved substitution or mismatch.
* Gapped alignments are supported, with insertions and deletions being
highlighted in the match sequence.
* Matches can be sorted and filtered.
* SNPs and other variations can be highlighted in the reference
sequence.
* Poly(A) tails can be displayed and poly(A) signals highlighted in the
reference sequence.
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dotter-dbgsym_4.44.1+dfsg-3_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 554616 bytes: control archive=544 bytes.
380 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: dotter-dbgsym
Source: seqtools
Version: 4.44.1+dfsg-3
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 608
Depends: dotter (= 4.44.1+dfsg-3)
Section: debug
Priority: optional
Description: debug symbols for dotter
Build-Ids: 5e79a2ed867d148ace735bc143d9243054485e35
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drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/doc/
lrwxrwxrwx root/root 0 2019-01-03 14:28 ./usr/share/doc/dotter-dbgsym -> dotter
dotter_4.44.1+dfsg-3_armhf.deb
------------------------------
new Debian package, version 2.0.
size 189080 bytes: control archive=1512 bytes.
2303 bytes, 41 lines control
322 bytes, 5 lines md5sums
Package: dotter
Source: seqtools
Version: 4.44.1+dfsg-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 339
Depends: libatk1.0-0 (>= 1.12.4), libc6 (>= 2.7), libcairo2 (>= 1.2.4), libcurl4 (>= 7.16.2), libfontconfig1 (>= 2.12.6), libfreetype6 (>= 2.2.1), libgbtools0, libgcc1 (>= 1:3.5), libgdk-pixbuf2.0-0 (>= 2.22.0), libglib2.0-0 (>= 2.22.0), libgtk2.0-0 (>= 2.12.0), libjsoncpp1 (>= 1.7.4), libpango-1.0-0 (>= 1.14.0), libpangocairo-1.0-0 (>= 1.14.0), libpangoft2-1.0-0 (>= 1.14.0), libstdc++6 (>= 5.2)
Conflicts: acedb-other-dotter (<< 4.9.39+dfsg.02-2)
Replaces: acedb-other-dotter (<< 4.9.39+dfsg.02-2)
Provides: acedb-other-dotter
Section: science
Priority: optional
Homepage: http://www.sanger.ac.uk/science/tools/seqtools
Description: detailed comparison of two genomic sequences
Dotter is a graphical dot-matrix program for detailed comparison of two
sequences.
.
* Every residue in one sequence is compared to every residue in the
other, and a matrix of scores is calculated.
* One sequence is plotted on the x-axis and the other on the y-axis.
* Noise is filtered out so that alignments appear as diagonal lines.
* Pairwise scores are averaged over a sliding window to make the score
matrix more intelligible.
* The averaged score matrix forms a three-dimensional landscape,
with the two sequences in two dimensions and the height of the
peaks in the third. This landscape is projected onto two
dimensions using a grey-scale image - the darker grey of a peak,
the higher the score is.
* The contrast and threshold of the grey-scale image can be adjusted
interactively, without having to recalculate the score matrix.
* An Alignment Tool is provided to examine the sequence alignment that
the grey-scale image represents.
* Known high-scoring pairs can be loaded from a GFF file and overlaid
onto the plot.
* Gene models can be loaded from GFF and displayed alongside the
relevant axis.
* Compare a sequence against itself to find internal repeats.
* Find overlaps between multiple sequences by making a dot-plot of all
sequences versus themselves.
* Run Dotter in batch mode to create large, time-consuming dot-plots as
a background process.
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drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/doc/
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-rw-r--r-- root/root 324 2019-01-03 14:28 ./usr/share/doc/dotter/changelog.Debian.gz
-rw-r--r-- root/root 98661 2019-01-03 14:28 ./usr/share/doc/dotter/changelog.gz
-rw-r--r-- root/root 1162 2019-01-03 14:28 ./usr/share/doc/dotter/copyright
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/man/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/man/man1/
-rw-r--r-- root/root 1533 2019-01-03 14:28 ./usr/share/man/man1/dotter.1.gz
libgbtools-dev_4.44.1+dfsg-3_armhf.deb
--------------------------------------
new Debian package, version 2.0.
size 139012 bytes: control archive=920 bytes.
557 bytes, 15 lines control
729 bytes, 10 lines md5sums
Package: libgbtools-dev
Source: seqtools
Version: 4.44.1+dfsg-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 268
Depends: libgbtools0 (= 4.44.1+dfsg-3)
Section: libdevel
Priority: optional
Homepage: http://www.sanger.ac.uk/science/tools/seqtools
Description: library for visualising sequence alignments (devel)
The SeqTools package contains three tools for visualising sequence
alignments: Blixem, Dotter and Belvu.
.
This package contains the static library and header files.
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lrwxrwxrwx root/root 0 2019-01-03 14:28 ./usr/lib/arm-linux-gnueabihf/libgbtools.so -> libgbtools.so.0.0.0
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-rw-r--r-- root/root 1162 2019-01-03 14:28 ./usr/share/doc/libgbtools-dev/copyright
libgbtools0-dbgsym_4.44.1+dfsg-3_armhf.deb
------------------------------------------
new Debian package, version 2.0.
size 440696 bytes: control archive=548 bytes.
395 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: libgbtools0-dbgsym
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Version: 4.44.1+dfsg-3
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 463
Depends: libgbtools0 (= 4.44.1+dfsg-3)
Section: debug
Priority: optional
Description: debug symbols for libgbtools0
Build-Ids: 1ef2bd4c37b8cfc6b01e46e574438c98a4c546eb
drwxr-xr-x root/root 0 2019-01-03 14:28 ./
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/lib/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/lib/debug/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/lib/debug/.build-id/1e/
-rw-r--r-- root/root 463540 2019-01-03 14:28 ./usr/lib/debug/.build-id/1e/f2bd4c37b8cfc6b01e46e574438c98a4c546eb.debug
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/doc/
lrwxrwxrwx root/root 0 2019-01-03 14:28 ./usr/share/doc/libgbtools0-dbgsym -> libgbtools0
libgbtools0_4.44.1+dfsg-3_armhf.deb
-----------------------------------
new Debian package, version 2.0.
size 131124 bytes: control archive=856 bytes.
583 bytes, 15 lines control
305 bytes, 4 lines md5sums
25 bytes, 1 lines shlibs
63 bytes, 2 lines triggers
Package: libgbtools0
Source: seqtools
Version: 4.44.1+dfsg-3
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Installed-Size: 197
Depends: libc6 (>= 2.15), libgcc1 (>= 1:3.5), libjsoncpp1 (>= 1.7.4)
Section: libs
Priority: optional
Homepage: http://www.sanger.ac.uk/science/tools/seqtools
Description: library for visualising sequence alignments
The SeqTools package contains three tools for visualising sequence
alignments: Blixem, Dotter and Belvu.
.
This package contains the library all three tools are linked against.
drwxr-xr-x root/root 0 2019-01-03 14:28 ./
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/lib/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2019-01-03 14:28 ./usr/lib/arm-linux-gnueabihf/libgbtools.so.0 -> libgbtools.so.0.0.0
-rw-r--r-- root/root 87456 2019-01-03 14:28 ./usr/lib/arm-linux-gnueabihf/libgbtools.so.0.0.0
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/doc/
drwxr-xr-x root/root 0 2019-01-03 14:28 ./usr/share/doc/libgbtools0/
-rw-r--r-- root/root 324 2019-01-03 14:28 ./usr/share/doc/libgbtools0/changelog.Debian.gz
-rw-r--r-- root/root 98661 2019-01-03 14:28 ./usr/share/doc/libgbtools0/changelog.gz
-rw-r--r-- root/root 1162 2019-01-03 14:28 ./usr/share/doc/libgbtools0/copyright
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Build Architecture: armhf
Build-Space: 86664
Build-Time: 655
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1137
Job: seqtools_4.44.1+dfsg-3
Machine Architecture: armhf
Package: seqtools
Package-Time: 1849
Source-Version: 4.44.1+dfsg-3
Space: 86664
Status: successful
Version: 4.44.1+dfsg-3
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Finished at 2019-01-09T06:49:46Z
Build needed 00:30:49, 86664k disc space