schroedinger-coordgenlibs →
3.0.2-1 →
armhf → 2023-09-20 09:11:52
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| schroedinger-coordgenlibs 3.0.2-1 (armhf) Wed, 20 Sep 2023 09:03:55 +0000 |
+==============================================================================+
Package: schroedinger-coordgenlibs
Version: 3.0.2-1
Source Version: 3.0.2-1
Distribution: trixie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/trixie-staging-armhf-sbuild-e6ce03a7-f279-4795-add7-975c2c8ad70e' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.1 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [14.7 MB]
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Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'schroedinger-coordgenlibs' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/schroedinger-coordgenlibs.git
Please use:
git clone https://salsa.debian.org/science-team/schroedinger-coordgenlibs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 173 kB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main schroedinger-coordgenlibs 3.0.2-1 (dsc) [2301 B]
Get:2 http://172.17.4.1/private trixie-staging/main schroedinger-coordgenlibs 3.0.2-1 (tar) [167 kB]
Get:3 http://172.17.4.1/private trixie-staging/main schroedinger-coordgenlibs 3.0.2-1 (diff) [3392 B]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/schroedinger-coordgenlibs-pyyL3c/schroedinger-coordgenlibs-3.0.2' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/schroedinger-coordgenlibs-pyyL3c' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-QoyXop/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-QoyXop/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-QoyXop/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ InRelease
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Get:3 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ Release.gpg [370 B]
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Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
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Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase sensible-utils sgml-base
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 49 not upgraded.
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debconf: delaying package configuration, since apt-utils is not installed
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: cmake, debhelper-compat (= 13), libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-test-dev, libmaeparser-dev, zlib1g-dev
Filtered Build-Depends: cmake, debhelper-compat (= 13), libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-test-dev, libmaeparser-dev, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-schroedinger-coordgenlibs-dummy' in '/<<BUILDDIR>>/resolver-QoyXop/apt_archive/sbuild-build-depends-schroedinger-coordgenlibs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-schroedinger-coordgenlibs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ Sources [553 B]
Get:5 copy:/<<BUILDDIR>>/resolver-QoyXop/apt_archive ./ Packages [633 B]
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Install schroedinger-coordgenlibs build dependencies (apt-based resolver)
-------------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase sgml-base util-linux-extra
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils bsdutils cmake
cmake-data debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libblkid1 libboost-dev libboost-filesystem-dev
libboost-filesystem1.74-dev libboost-filesystem1.74.0 libboost-iostreams-dev
libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-regex1.74-dev
libboost-regex1.74.0 libboost-system1.74-dev libboost-system1.74.0
libboost-test-dev libboost-test1.74-dev libboost-test1.74.0 libboost1.74-dev
libbrotli1 libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libicu-dev libicu72 libjsoncpp25
libmaeparser-dev libmaeparser1 libmagic-mgc libmagic1 libmount1
libnghttp2-14 libpipeline1 libproc2-0 libpsl5 librhash0 librtmp1
libsmartcols1 libssh2-1 libsub-override-perl libtool libuchardet0 libuuid1
libuv1 libxml2 m4 man-db mount po-debconf procps util-linux util-linux-extra
zlib1g zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc cmake-doc cmake-format
elpa-cmake-mode ninja-build dh-make gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip libboost-doc libboost1.74-doc
libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
libboost-context1.74-dev libboost-contract1.74-dev
libboost-coroutine1.74-dev libboost-date-time1.74-dev
libboost-exception1.74-dev libboost-fiber1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev
libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev
libboost-numpy1.74-dev libboost-program-options1.74-dev
libboost-python1.74-dev libboost-random1.74-dev
libboost-serialization1.74-dev libboost-stacktrace1.74-dev
libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev
libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev
libboost-nowide1.74-dev icu-doc cryptsetup-bin libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser nfs-common
libmail-box-perl dosfstools kbd util-linux-locales
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl publicsuffix
libltdl-dev uuid-runtime libmail-sendmail-perl psmisc
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libboost-dev libboost-filesystem-dev
libboost-filesystem1.74-dev libboost-filesystem1.74.0 libboost-iostreams-dev
libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-regex1.74-dev
libboost-regex1.74.0 libboost-system1.74-dev libboost-system1.74.0
libboost-test-dev libboost-test1.74-dev libboost-test1.74.0 libboost1.74-dev
libbrotli1 libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libicu-dev libicu72 libjsoncpp25
libmaeparser-dev libmaeparser1 libmagic-mgc libmagic1 libnghttp2-14
libpipeline1 libproc2-0 libpsl5 librhash0 librtmp1 libssh2-1
libsub-override-perl libtool libuchardet0 libuv1 libxml2 m4 man-db
po-debconf procps sbuild-build-depends-schroedinger-coordgenlibs-dummy
zlib1g-dev
The following packages will be upgraded:
bsdutils libblkid1 libmount1 libsmartcols1 libuuid1 mount util-linux
util-linux-extra zlib1g
9 upgraded, 65 newly installed, 0 to remove and 40 not upgraded.
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Get:74 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
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W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.40-2+rpi2 dpkg-dev_1.21.22+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-9+rpi1+deb12u1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.1.38-1+rpi1
Package versions: adduser_3.137 apt_2.6.1 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_12.4+rpi1+deb12u1 base-passwd_3.6.1 bash_5.2.15-2 binutils_2.40-2+rpi2 binutils-arm-linux-gnueabihf_2.40-2+rpi2 binutils-common_2.40-2+rpi2 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.9 bzip2_1.0.8-5+b2 cmake_3.27.4-1 cmake-data_3.27.4-1 coreutils_9.1-1 cpp_4:12.2.0-3+rpi1 cpp-12_12.2.0-14+rpi1 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.6 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dirmngr_2.2.40-1.1 dpkg_1.21.22+rpi1 dpkg-dev_1.21.22+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.31-1.2 file_1:5.45-2 findutils_4.9.0-4 g++_4:12.2.0-3+rpi1 g++-12_12.2.0-14+rpi1 gcc_4:12.2.0-3+rpi1 gcc-12_12.2.0-14+rpi1 gcc-12-base_12.2.0-14+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-12 gettext-base_0.21-12 gnupg_2.2.40-1.1 gnupg-l10n_2.2.40-1.1 gnupg-utils_2.2.40-1.1 gpg_2.2.40-1.1 gpg-agent_2.2.40-1.1 gpg-wks-client_2.2.40-1.1 gpg-wks-server_2.2.40-1.1 gpgconf_2.2.40-1.1 gpgsm_2.2.40-1.1 gpgv_2.2.40-1.1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 hostname_3.23+nmu1 icu-devtools_72.1-3 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-3 libacl1_2.3.1-3 libapt-pkg6.0_2.6.1 libarchive-zip-perl_1.68-1 libarchive13_3.6.2-1 libasan8_12.2.0-14+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-14+rpi1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.0.9-1 libbinutils_2.40-2+rpi2 libblkid1_2.39.2-1 libboost-dev_1.74.0.3+b4 libboost-filesystem-dev_1.74.0.3+b4 libboost-filesystem1.74-dev_1.74.0+ds1-21 libboost-filesystem1.74.0_1.74.0+ds1-21 libboost-iostreams-dev_1.74.0.3+b4 libboost-iostreams1.74-dev_1.74.0+ds1-21 libboost-iostreams1.74.0_1.74.0+ds1-21 libboost-regex1.74-dev_1.74.0+ds1-21 libboost-regex1.74.0_1.74.0+ds1-21 libboost-system1.74-dev_1.74.0+ds1-21 libboost-system1.74.0_1.74.0+ds1-21 libboost-test-dev_1.74.0.3+b4 libboost-test1.74-dev_1.74.0+ds1-21 libboost-test1.74.0_1.74.0+ds1-21 libboost1.74-dev_1.74.0+ds1-21 libbrotli1_1.0.9-2+b3 libbz2-1.0_1.0.8-5+b2 libc-bin_2.36-9+rpi1+deb12u1 libc-dev-bin_2.36-9+rpi1+deb12u1 libc6_2.36-9+rpi1+deb12u1 libc6-dev_2.36-9+rpi1+deb12u1 libcap-ng0_0.8.3-1+b1 libcap2_1:2.66-4 libcap2-bin_1:2.66-4 libcc1-0_12.2.0-14+rpi1 libcom-err2_1.47.0-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2+rpi2 libctf0_2.40-2+rpi2 libcurl4_7.88.1-10+rpi1 libdb5.3_5.3.28+dfsg2-1 libdebconfclient0_0.270 libdebhelper-perl_13.11.6 libdpkg-perl_1.21.22+rpi1 libelf1_0.188-2.1+rpi1 libexpat1_2.5.0-1 libext2fs2_1.47.0-2 libfakeroot_1.31-1.2 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-12-dev_12.2.0-14+rpi1 libgcc-s1_12.2.0-14+rpi1 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.9-2 libgomp1_12.2.0-14+rpi1 libgpg-error0_1.46-1 libgssapi-krb5-2_1.20.1-2 libhogweed6_3.8.1-2 libicu-dev_72.1-3 libicu72_72.1-3 libidn2-0_2.3.3-1+b2 libisl23_0.25-1 libjansson4_2.14-2 libjsoncpp25_1.9.5-6 libk5crypto3_1.20.1-2 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-2 libkrb5support0_1.20.1-2 libksba8_1.6.3-2 libldap-2.5-0_2.5.13+dfsg-5+rpi1 liblz4-1_1.9.4-1+rpi1+b1 liblzma5_5.4.1-0.2 libmaeparser-dev_1.3.0-1 libmaeparser1_1.3.0-1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.0.4-2 libmount1_2.39.2-1 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libncursesw6_6.4-4 libnettle8_3.8.1-2 libnghttp2-14_1.52.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-cap_1:2.66-4 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-7 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libproc2-0_2:4.0.3-1 libpsl5_0.21.2-1 libreadline8_8.2-1.3 librhash0_1.4.3-3 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg-10 libsasl2-modules-db_2.1.28+dfsg-10 libseccomp2_2.5.4-1+rpi1+b1 libselinux1_3.4-1+b2 libsemanage-common_3.5-1 libsemanage2_3.4-1+b2 libsepol1_3.1-1 libsepol2_3.4-2.1 libsmartcols1_2.39.2-1 libsqlite3-0_3.40.1-2 libss2_1.47.0-2 libssh2-1_1.11.0-2 libssl1.1_1.1.1o-1 libssl3_3.0.9-1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 libsub-override-perl_0.09-4 libsystemd0_252.12-1~deb12u1+rpi1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.4-4 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libubsan1_12.2.0-14+rpi1 libuchardet0_0.0.7-1 libudev1_252.12-1~deb12u1+rpi1 libunistring2_1.0-2 libuuid1_2.39.2-1 libuv1_1.44.2-1+rpi1 libxml2_2.9.14+dfsg-1.3 libxxhash0_0.8.1-1 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.1.38-1+rpi1 login_1:4.13+dfsg1-1 logsave_1.47.0-2 lsb-base_11.6+rpi1 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-3 mawk_1.3.4.20200120-3.1 mount_2.39.2-1 nano_7.2-1 ncurses-base_6.4+20230625-2 ncurses-bin_6.4-4 netbase_6.4 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.36_5.36.0-7 pinentry-curses_1.2.1-1 po-debconf_1.0.21+nmu1 procps_2:4.0.3-1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-schroedinger-coordgenlibs-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sgml-base_1.31 sysvinit-utils_3.06-4 tar_1.34+dfsg-1.2 tzdata_2023c-10 usrmerge_37 util-linux_2.39.2-1 util-linux-extra_2.39.2-1 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: Signature made Wed Jun 14 05:33:51 2023 UTC
gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv: issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./schroedinger-coordgenlibs_3.0.2-1.dsc: no acceptable signature found
dpkg-source: info: extracting schroedinger-coordgenlibs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking schroedinger-coordgenlibs_3.0.2.orig.tar.gz
dpkg-source: info: unpacking schroedinger-coordgenlibs_3.0.2-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=trixie-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=trixie-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=trixie-staging-armhf-sbuild-e6ce03a7-f279-4795-add7-975c2c8ad70e
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package schroedinger-coordgenlibs
dpkg-buildpackage: info: source version 3.0.2-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
dh_auto_configure -a
cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf ..
CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required):
Compatibility with CMake < 3.5 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
-- The C compiler identification is GNU 12.2.0
-- The CXX compiler identification is GNU 12.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- maeparser include dir set as '/usr/include'
-- maeparser libraries set as '/usr/lib/arm-linux-gnueabihf/libmaeparser.so'
-- Found compiled maeparser library at
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.74.0/BoostConfig.cmake (found version "1.74.0")
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.74.0/BoostConfig.cmake (found version "1.74.0") found components: filesystem
-- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.74.0/BoostConfig.cmake (found version "1.74.0") found components: filesystem unit_test_framework
-- Configuring done (2.6s)
-- Generating done (0.1s)
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
FETCHCONTENT_FULLY_DISCONNECTED
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
dh_auto_build -a
cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/coordgen.dir/build.make CMakeFiles/coordgen.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/coordgen.dir/DependInfo.cmake "--color="
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/coordgen.dir/build.make CMakeFiles/coordgen.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 4%] Building CXX object CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o -MF CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o.d -o CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o -c /<<PKGBUILDDIR>>/CoordgenFragmentBuilder.cpp
[ 9%] Building CXX object CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o
[ 14%] Building CXX object CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o -MF CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o.d -o CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o -c /<<PKGBUILDDIR>>/CoordgenFragmenter.cpp
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o -MF CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o.d -o CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o -c /<<PKGBUILDDIR>>/CoordgenMinimizer.cpp
[ 19%] Building CXX object CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o -MF CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o.d -o CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o -c /<<PKGBUILDDIR>>/CoordgenMacrocycleBuilder.cpp
[ 23%] Building CXX object CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o -MF CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o.d -o CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o -c /<<PKGBUILDDIR>>/CoordgenTemplates.cpp
[ 28%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizer.cpp
[ 33%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerAtom.cpp
[ 38%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerBond.cpp
[ 42%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerFragment.cpp
[ 47%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerMarchingSquares.cpp
[ 52%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerMolecule.cpp
[ 57%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerResidue.cpp
[ 61%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerResidueInteraction.cpp
[ 66%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -fPIC -fvisibility=hidden -Wall -Wextra -Werror -MD -MT CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o -MF CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o.d -o CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerRing.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_coordgen.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wextra -Werror -MD -MT test/CMakeFiles/test_smilesparser.dir/test_smilesparser.cpp.o -MF CMakeFiles/test_smilesparser.dir/test_smilesparser.cpp.o.d -o CMakeFiles/test_smilesparser.dir/test_smilesparser.cpp.o -c /<<PKGBUILDDIR>>/test/test_smilesparser.cpp
[ 76%] Building CXX object test/CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DSOURCE_DIR=\"/<<PKGBUILDDIR>>\" -DTEST_SAMPLES_PATH=\"/<<PKGBUILDDIR>>/test\" -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wextra -Werror -MD -MT test/CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o -MF CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o.d -o CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o -c /<<PKGBUILDDIR>>/test/test_coordgen.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/example_dir && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_FILESYSTEM_DYN_LINK -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -Wall -Wextra -Werror -MD -MT example_dir/CMakeFiles/example.dir/example.cpp.o -MF CMakeFiles/example.dir/example.cpp.o.d -o CMakeFiles/example.dir/example.cpp.o -c /<<PKGBUILDDIR>>/example_dir/example.cpp
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/example.dir/example.cpp.o -o example -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf ../libcoordgen.so.3.0.2 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so.1.74.0
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_smilesparser.dir/test_smilesparser.cpp.o -o test_smilesparser -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf ../libcoordgen.so.3.0.2 /usr/lib/arm-linux-gnueabihf/libboost_unit_test_framework.so.1.74.0 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so.1.74.0
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o -o test_coordgen -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf ../libcoordgen.so.3.0.2 -lmaeparser /usr/lib/arm-linux-gnueabihf/libboost_unit_test_framework.so.1.74.0 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so.1.74.0
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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dh_auto_test -a
cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=--verbose ARGS\+=-j4
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j4
UpdateCTestConfiguration from :/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Parse Config file:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
UpdateCTestConfiguration from :/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Parse Config file:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
Start 1: example
1: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/example_dir/example
1: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test
1: Test timeout computed to be: 1500
test 2
Start 2: test_coordgen
2: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/test_coordgen
2: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test
2: Test timeout computed to be: 1500
test 3
Start 3: test_smilesparser
3: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/test_coordgen
3: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test
3: Test timeout computed to be: 1500
1: (-50, 0) (0, 0)
1/3 Test #1: example .......................... Passed 0.02 sec
2: Running 16 test cases...
2:
2: [1;32;49m*** No errors detected
3: Running 16 test cases...
3:
3: [1;32;49m*** No errors detected
2: [0;39;49m
3: [0;39;49m
2/3 Test #2: test_coordgen .................... Passed 6.35 sec
3/3 Test #3: test_smilesparser ................ Passed 6.35 sec
100% tests passed, 0 tests failed out of 3
Total Test time (real) = 6.37 sec
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
create-stamp debian/debhelper-build-stamp
dh_prep -a
dh_installdirs -a
dh_auto_install -a
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so.3.0.2
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenConfig.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenFragmentBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenFragmenter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenMacrocycleBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenMinimizer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerAtom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerBendInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerBond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerClashInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerEZConstrainInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerFragment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerMarchingSquares.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerMaths.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerMolecule.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerResidue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerResidueInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerRing.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerStretchInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/coordgen-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/coordgen-config-none.cmake
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_install -a
dh_installdocs -a
dh_installchangelogs -a
dh_installexamples -a
dh_perl -a
dh_link -a
dh_strip_nondeterminism -a
dh_compress -a
dh_fixperms -a
dh_missing -a
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libcoordgen3/usr/lib/arm-linux-gnueabihf/libcoordgen.so.3.0.2 found in none of the libraries
dh_installdeb -a
dh_gencontrol -a
dh_md5sums -a
dh_builddeb -a
dpkg-deb: building package 'libcoordgen3' in '../libcoordgen3_3.0.2-1_armhf.deb'.
dpkg-deb: building package 'libcoordgen-dev' in '../libcoordgen-dev_3.0.2-1_armhf.deb'.
dpkg-deb: building package 'libcoordgen3-dbgsym' in '../libcoordgen3-dbgsym_3.0.2-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../schroedinger-coordgenlibs_3.0.2-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../schroedinger-coordgenlibs_3.0.2-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-09-20T09:11:46Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
schroedinger-coordgenlibs_3.0.2-1_armhf.changes:
------------------------------------------------
Format: 1.8
Date: Wed, 14 Jun 2023 01:28:06 -0400
Source: schroedinger-coordgenlibs
Binary: libcoordgen-dev libcoordgen3 libcoordgen3-dbgsym
Architecture: armhf
Version: 3.0.2-1
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andrius Merkys <merkys@debian.org>
Description:
libcoordgen-dev - 2D coordinate generation for chemical compounds - header files
libcoordgen3 - 2D coordinate generation for chemical compounds
Changes:
schroedinger-coordgenlibs (3.0.2-1) unstable; urgency=medium
.
* Team upload.
* New upstream version 3.0.2
* Update standards version to 4.6.2, no changes needed.
* Add myself to debian/copyright.
* Wrap and sort.
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Checksums-Sha256:
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Files:
5e7236ae49cbd9ac12dffea0334ad943 46548 libdevel optional libcoordgen-dev_3.0.2-1_armhf.deb
740dfe6c9eecd37427dd06e2b9efb16b 3301832 debug optional libcoordgen3-dbgsym_3.0.2-1_armhf.deb
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libcoordgen-dev_3.0.2-1_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 46548 bytes: control archive=1452 bytes.
726 bytes, 19 lines control
2164 bytes, 26 lines md5sums
Package: libcoordgen-dev
Source: schroedinger-coordgenlibs
Version: 3.0.2-1
Architecture: armhf
Maintainer: Debian Science Team <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 318
Depends: libcoordgen3 (= 3.0.2-1)
Breaks: libschroedinger-coordgenlibs-dev
Replaces: libschroedinger-coordgenlibs-dev
Section: libdevel
Priority: optional
Multi-Arch: same
Homepage: https://github.com/schrodinger/coordgenlibs
Description: 2D coordinate generation for chemical compounds - header files
This package provides the Open Source release of Schroedinger's routines
for the 2D coordinate representation of chemical compounds.
.
This package provides header files for developing against the API of that
library.
drwxr-xr-x root/root 0 2023-06-14 05:28 ./
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/include/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/include/coordgen/
-rw-r--r-- root/root 338 2023-02-01 20:47 ./usr/include/coordgen/CoordgenConfig.hpp
-rw-r--r-- root/root 6693 2023-02-01 20:47 ./usr/include/coordgen/CoordgenFragmentBuilder.h
-rw-r--r-- root/root 3617 2023-02-01 20:47 ./usr/include/coordgen/CoordgenFragmenter.h
-rw-r--r-- root/root 12695 2023-02-01 20:47 ./usr/include/coordgen/CoordgenMacrocycleBuilder.h
-rw-r--r-- root/root 14232 2023-02-01 20:47 ./usr/include/coordgen/CoordgenMinimizer.h
-rw-r--r-- root/root 21803 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizer.h
-rw-r--r-- root/root 9992 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerAtom.h
-rw-r--r-- root/root 4827 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerBendInteraction.h
-rw-r--r-- root/root 3765 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerBond.h
-rw-r--r-- root/root 2270 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerClashInteraction.h
-rw-r--r-- root/root 3201 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerEZConstrainInteraction.h
-rw-r--r-- root/root 8625 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerFragment.h
-rw-r--r-- root/root 2025 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerInteraction.h
-rw-r--r-- root/root 2909 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerMarchingSquares.h
-rw-r--r-- root/root 24110 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerMaths.h
-rw-r--r-- root/root 3854 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerMolecule.h
-rw-r--r-- root/root 1841 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerResidue.h
-rw-r--r-- root/root 1053 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerResidueInteraction.h
-rw-r--r-- root/root 2278 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerRing.h
-rw-r--r-- root/root 1566 2023-02-01 20:47 ./usr/include/coordgen/sketcherMinimizerStretchInteraction.h
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/cmake/
-rw-r--r-- root/root 851 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/cmake/coordgen-config-none.cmake
-rw-r--r-- root/root 4155 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/cmake/coordgen-config.cmake
lrwxrwxrwx root/root 0 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/libcoordgen.so -> libcoordgen.so.3
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/coordgen/
-rw-r--r-- root/root 158294 2023-02-01 20:47 ./usr/share/coordgen/templates.mae
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/doc/libcoordgen-dev/
-rw-r--r-- root/root 1360 2023-06-14 05:28 ./usr/share/doc/libcoordgen-dev/changelog.Debian.gz
-rw-r--r-- root/root 1905 2023-06-14 05:27 ./usr/share/doc/libcoordgen-dev/copyright
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/doc/libcoordgen-dev/examples/
-rw-r--r-- root/root 771 2023-02-01 20:47 ./usr/share/doc/libcoordgen-dev/examples/example.cpp
libcoordgen3-dbgsym_3.0.2-1_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 3301832 bytes: control archive=568 bytes.
421 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libcoordgen3-dbgsym
Source: schroedinger-coordgenlibs
Version: 3.0.2-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian Science Team <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 3336
Depends: libcoordgen3 (= 3.0.2-1)
Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libcoordgen3
Build-Ids: 1bff128c134428033c5b14aa3bc44f9fd41f4f4b
drwxr-xr-x root/root 0 2023-06-14 05:28 ./
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/debug/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/debug/.build-id/1b/
-rw-r--r-- root/root 3404924 2023-06-14 05:28 ./usr/lib/debug/.build-id/1b/ff128c134428033c5b14aa3bc44f9fd41f4f4b.debug
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-06-14 05:28 ./usr/share/doc/libcoordgen3-dbgsym -> libcoordgen3
libcoordgen3_3.0.2-1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 170708 bytes: control archive=892 bytes.
641 bytes, 16 lines control
309 bytes, 4 lines md5sums
38 bytes, 1 lines shlibs
68 bytes, 2 lines triggers
Package: libcoordgen3
Source: schroedinger-coordgenlibs
Version: 3.0.2-1
Architecture: armhf
Maintainer: Debian Science Team <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 480
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libstdc++6 (>= 11)
Breaks: libschroedinger-coordgenlibs1
Replaces: libschroedinger-coordgenlibs1
Section: libs
Priority: optional
Multi-Arch: same
Homepage: https://github.com/schrodinger/coordgenlibs
Description: 2D coordinate generation for chemical compounds
This package provides the Open Source release of Schroedinger's routines
for the 2D coordinate representation of chemical compounds.
drwxr-xr-x root/root 0 2023-06-14 05:28 ./
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/
lrwxrwxrwx root/root 0 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/libcoordgen.so.3 -> libcoordgen.so.3.0.2
-rw-r--r-- root/root 472480 2023-06-14 05:28 ./usr/lib/arm-linux-gnueabihf/libcoordgen.so.3.0.2
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/doc/
drwxr-xr-x root/root 0 2023-06-14 05:28 ./usr/share/doc/libcoordgen3/
-rw-r--r-- root/root 2298 2023-02-01 20:47 ./usr/share/doc/libcoordgen3/README.md.gz
-rw-r--r-- root/root 1359 2023-06-14 05:28 ./usr/share/doc/libcoordgen3/changelog.Debian.gz
-rw-r--r-- root/root 1905 2023-06-14 05:27 ./usr/share/doc/libcoordgen3/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 60344
Build-Time: 144
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 303
Job: schroedinger-coordgenlibs_3.0.2-1
Machine Architecture: armhf
Package: schroedinger-coordgenlibs
Package-Time: 471
Source-Version: 3.0.2-1
Space: 60344
Status: successful
Version: 3.0.2-1
--------------------------------------------------------------------------------
Finished at 2023-09-20T09:11:46Z
Build needed 00:07:51, 60344k disk space