schroedinger-coordgenlibs →
1.4.0-2 →
armhf → 2020-05-17 17:48:24
sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on test2019
+==============================================================================+
| schroedinger-coordgenlibs 1.4.0-2 (armhf) Sun, 17 May 2020 17:35:33 +0000 |
+==============================================================================+
Package: schroedinger-coordgenlibs
Version: 1.4.0-2
Source Version: 1.4.0-2
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
Build Type: any
I: NOTICE: Log filtering will replace 'var/run/schroot/mount/bullseye-staging-armhf-sbuild-c202c02e-5b04-4913-954e-a168d498e638' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
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Reading package lists...
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'schroedinger-coordgenlibs' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/science-team/schroedinger-coordgenlibs.git
Please use:
git clone https://salsa.debian.org/science-team/schroedinger-coordgenlibs.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 160 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main schroedinger-coordgenlibs 1.4.0-2 (dsc) [2301 B]
Get:2 http://172.17.0.1/private bullseye-staging/main schroedinger-coordgenlibs 1.4.0-2 (tar) [154 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main schroedinger-coordgenlibs 1.4.0-2 (diff) [3468 B]
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Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/schroedinger-coordgenlibs-wMiSKl/schroedinger-coordgenlibs-1.4.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/schroedinger-coordgenlibs-wMiSKl' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-o83rKT/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-o83rKT/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-o83rKT/gpg/trustdb.gpg: trustdb created
gpg: key E70254B6505CF8F7: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key E70254B6505CF8F7: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key E70254B6505CF8F7: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ InRelease
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Get:3 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Sources [349 B]
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W: copy:///<<BUILDDIR>>/resolver-o83rKT/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
libpam-cap
Use 'apt autoremove' to remove it.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 25 not upgraded.
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Get:1 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
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(Reading database ... 14093 files and directories currently installed.)
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Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: cmake, debhelper-compat (= 13), libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-test-dev, libmaeparser-dev, zlib1g-dev
Filtered Build-Depends: cmake, debhelper-compat (= 13), libboost-dev, libboost-filesystem-dev, libboost-iostreams-dev, libboost-test-dev, libmaeparser-dev, zlib1g-dev
dpkg-deb: building package 'sbuild-build-depends-schroedinger-coordgenlibs-dummy' in '/<<BUILDDIR>>/resolver-o83rKT/apt_archive/sbuild-build-depends-schroedinger-coordgenlibs-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-schroedinger-coordgenlibs-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release.gpg [370 B]
Ign:3 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release.gpg
Get:4 copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Sources [553 B]
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Reading package lists...
W: copy:///<<BUILDDIR>>/resolver-o83rKT/apt_archive/./Release.gpg: The key(s) in the keyring /etc/apt/trusted.gpg.d/sbuild-build-depends-archive.gpg are ignored as the file is not readable by user '_apt' executing apt-key.
W: GPG error: copy:/<<BUILDDIR>>/resolver-o83rKT/apt_archive ./ Release: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY E70254B6505CF8F7
Reading package lists...
Install schroedinger-coordgenlibs build dependencies (apt-based resolver)
-------------------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
libpam-cap
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libboost-dev libboost-filesystem-dev
libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev
libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-regex1.67-dev
libboost-regex1.67.0 libboost-system1.67-dev libboost-system1.67.0
libboost-test-dev libboost-test1.67-dev libboost-test1.67.0 libboost1.67-dev
libbrotli1 libbsd0 libcroco3 libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libicu-dev
libicu63 libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
libmaeparser-dev libmaeparser1 libmagic-mgc libmagic1 libncurses6
libnghttp2-14 libpipeline1 libprocps8 libpsl5 librhash0 librtmp1 libsigsegv2
libssh2-1 libssl1.1 libsub-override-perl libtinfo5 libtool libuchardet0
libuv1 libxml2 m4 man-db po-debconf procps sensible-utils zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev
libgettextpo-dev groff lrzip libboost-doc libboost1.67-doc
libboost-atomic1.67-dev libboost-chrono1.67-dev libboost-container1.67-dev
libboost-context1.67-dev libboost-contract1.67-dev
libboost-coroutine1.67-dev libboost-date-time1.67-dev
libboost-exception1.67-dev libboost-fiber1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev
libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev
libboost-numpy1.67-dev libboost-program-options1.67-dev
libboost-python1.67-dev libboost-random1.67-dev
libboost-serialization1.67-dev libboost-signals1.67-dev
libboost-stacktrace1.67-dev libboost-thread1.67-dev libboost-timer1.67-dev
libboost-type-erasure1.67-dev libboost-wave1.67-dev libboost1.67-tools-dev
libmpfrc++-dev libntl-dev krb5-doc krb5-user icu-doc libtool-doc gfortran
| fortran95-compiler gcj-jdk m4-doc apparmor less www-browser
libmail-box-perl
Recommended packages:
curl | wget | lynx ca-certificates libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs krb5-locales libgpm2 publicsuffix libltdl-dev
libmail-sendmail-perl psmisc
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils cmake cmake-data
debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext
gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl
libarchive13 libboost-dev libboost-filesystem-dev
libboost-filesystem1.67-dev libboost-filesystem1.67.0 libboost-iostreams-dev
libboost-iostreams1.67-dev libboost-iostreams1.67.0 libboost-regex1.67-dev
libboost-regex1.67.0 libboost-system1.67-dev libboost-system1.67.0
libboost-test-dev libboost-test1.67-dev libboost-test1.67.0 libboost1.67-dev
libbrotli1 libbsd0 libcroco3 libcurl4 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libglib2.0-0 libgssapi-krb5-2 libicu-dev
libicu63 libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0
libmaeparser-dev libmaeparser1 libmagic-mgc libmagic1 libncurses6
libnghttp2-14 libpipeline1 libprocps8 libpsl5 librhash0 librtmp1 libsigsegv2
libssh2-1 libssl1.1 libsub-override-perl libtinfo5 libtool libuchardet0
libuv1 libxml2 m4 man-db po-debconf procps
sbuild-build-depends-schroedinger-coordgenlibs-dummy sensible-utils
zlib1g-dev
0 upgraded, 78 newly installed, 0 to remove and 25 not upgraded.
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Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-4 [59.8 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-4 [238 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
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Get:15 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
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Get:21 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
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Get:24 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
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Get:40 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3.1 [65.8 kB]
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Get:51 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
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Get:56 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13 [1002 kB]
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Get:60 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-17 [8389 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2+b11 [4464 B]
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Get:65 http://172.17.0.1/private bullseye-staging/main armhf libboost-filesystem1.67-dev armhf 1.67.0-17 [261 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libboost-filesystem-dev armhf 1.67.0.2+b11 [4284 B]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.67.0 armhf 1.67.0-17 [452 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.67-dev armhf 1.67.0-17 [555 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.67.0 armhf 1.67.0-17 [246 kB]
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Get:73 http://172.17.0.1/private bullseye-staging/main armhf libboost-test1.67.0 armhf 1.67.0-17 [423 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libboost-test1.67-dev armhf 1.67.0-17 [498 kB]
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Get:76 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser1 armhf 1.2.3-3 [72.7 kB]
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Get:78 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
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Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Not building database; man-db/auto-update is not 'true'.
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Processing triggers for libc-bin (2.30-7+rpi1) ...
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.19.20-v7+ armhf (armv7l)
Toolchain package versions: binutils_2.34-5+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-11+rpi1 gcc-9_9.3.0-11+rpi1 libc6-dev_2.30-7+rpi1 libstdc++-9-dev_9.3.0-11+rpi1 libstdc++6_10-20200418-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.0 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-5+rpi1 binutils-arm-linux-gnueabihf_2.34-5+rpi1 binutils-common_2.34-5+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.35.1-2 build-essential_12.8 bzip2_1.0.8-2 cmake_3.16.3-3+rpi1 cmake-data_3.16.3-3+rpi1 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-11+rpi1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-2 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-11+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10-20200418-1+rpi1 gcc-9_9.3.0-11+rpi1 gcc-9-base_9.3.0-11+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 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readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-schroedinger-coordgenlibs-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 util-linux_2.35.1-2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue May 12 08:25:56 2020 UTC
gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv: issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./schroedinger-coordgenlibs_1.4.0-2.dsc
dpkg-source: info: extracting schroedinger-coordgenlibs in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking schroedinger-coordgenlibs_1.4.0.orig.tar.gz
dpkg-source: info: unpacking schroedinger-coordgenlibs_1.4.0-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying cmake_standard_dirs.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DBUS_SESSION_BUS_ADDRESS=unix:path=/run/user/112/bus
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
INVOCATION_ID=720b06fe9d064e5ca4b0c1eb263ac862
JOURNAL_STREAM=8:20551
LANG=en_GB.UTF-8
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PWD=/
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=116
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-c202c02e-5b04-4913-954e-a168d498e638
SCHROOT_UID=112
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
XDG_RUNTIME_DIR=/run/user/112
XDG_SESSION_ID=c58803
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package schroedinger-coordgenlibs
dpkg-buildpackage: info: source version 1.4.0-2
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean
dh_clean
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/libcoordgen-dev.substvars debian/libcoordgen1.substvars debian/files
rm -fr -- debian/libcoordgen-dev/ debian/tmp/ debian/libcoordgen1/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary-arch
dh binary-arch
dh_update_autotools_config -a
dh_autoreconf -a
debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DCMAKE_PREFIX_PATH=/usr/lib/arm-linux-gnueabihf/cmake
install -d debian/.debhelper/generated/_source/home debian/.debhelper/generated/_source/xdg-runtime-dir
install -d obj-arm-linux-gnueabihf
cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_AUTOGEN_VERBOSE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_PREFIX_PATH=/usr/lib/arm-linux-gnueabihf/cmake ..
-- The C compiler identification is GNU 9.3.0
-- The CXX compiler identification is GNU 9.3.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- maeparser include dir set as '/usr/include'
-- maeparser libraries set as '/usr/lib/arm-linux-gnueabihf/libmaeparser.so'
-- Found compiled maeparser library at
-- Found Boost: /usr/include (found version "1.67.0")
-- Found Boost: /usr/include (found version "1.67.0") found components: filesystem system
-- Found Boost: /usr/include (found version "1.67.0") found components: filesystem unit_test_framework system
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_AUTOGEN_VERBOSE
CMAKE_EXPORT_NO_PACKAGE_REGISTRY
-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build -a
cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/coordgen.dir/build.make CMakeFiles/coordgen.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/coordgen.dir/DependInfo.cmake --color=
Scanning dependencies of target coordgen
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f CMakeFiles/coordgen.dir/build.make CMakeFiles/coordgen.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o
[ 15%] Building CXX object CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o
[ 15%] Building CXX object CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o
[ 21%] Building CXX object CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o -c /<<PKGBUILDDIR>>/CoordgenFragmentBuilder.cpp
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o -c /<<PKGBUILDDIR>>/CoordgenFragmenter.cpp
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o -c /<<PKGBUILDDIR>>/CoordgenMacrocycleBuilder.cpp
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o -c /<<PKGBUILDDIR>>/CoordgenMinimizer.cpp
[ 26%] Building CXX object CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o -c /<<PKGBUILDDIR>>/CoordgenTemplates.cpp
[ 31%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizer.cpp
[ 36%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerAtom.cpp
[ 42%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerBond.cpp
[ 47%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerFragment.cpp
[ 52%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerMarchingSquares.cpp
[ 57%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerMolecule.cpp
[ 63%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerResidue.cpp
[ 68%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerResidueInteraction.cpp
[ 73%] Building CXX object CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o
/usr/bin/c++ -DIN_COORDGEN -Dcoordgen_EXPORTS -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -std=gnu++11 -o CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o -c /<<PKGBUILDDIR>>/sketcherMinimizerRing.cpp
[ 78%] Linking CXX shared library libcoordgen.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/coordgen.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libcoordgen.so.1 -o libcoordgen.so.1.4.0 CMakeFiles/coordgen.dir/CoordgenFragmentBuilder.cpp.o CMakeFiles/coordgen.dir/CoordgenFragmenter.cpp.o CMakeFiles/coordgen.dir/CoordgenMacrocycleBuilder.cpp.o CMakeFiles/coordgen.dir/CoordgenMinimizer.cpp.o CMakeFiles/coordgen.dir/CoordgenTemplates.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizer.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerAtom.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerBond.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerFragment.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerMarchingSquares.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerMolecule.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerResidue.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerResidueInteraction.cpp.o CMakeFiles/coordgen.dir/sketcherMinimizerRing.cpp.o
/usr/bin/cmake -E cmake_symlink_library libcoordgen.so.1.4.0 libcoordgen.so.1 libcoordgen.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target coordgen
make -f example_dir/CMakeFiles/example.dir/build.make example_dir/CMakeFiles/example.dir/depend
make -f test/CMakeFiles/test_coordgen.dir/build.make test/CMakeFiles/test_coordgen.dir/depend
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/example_dir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/example_dir /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/example_dir/CMakeFiles/example.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test/CMakeFiles/test_coordgen.dir/DependInfo.cmake --color=
Scanning dependencies of target example
Scanning dependencies of target test_coordgen
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f example_dir/CMakeFiles/example.dir/build.make example_dir/CMakeFiles/example.dir/build
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f test/CMakeFiles/test_coordgen.dir/build.make test/CMakeFiles/test_coordgen.dir/build
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object example_dir/CMakeFiles/example.dir/example.cpp.o
[ 89%] Building CXX object test/CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/example_dir && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -o CMakeFiles/example.dir/example.cpp.o -c /<<PKGBUILDDIR>>/example_dir/example.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DSOURCE_DIR=\"/<<PKGBUILDDIR>>\" -DTEST_SAMPLES_PATH=\"/<<PKGBUILDDIR>>/test\" -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++11 -o CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o -c /<<PKGBUILDDIR>>/test/test_coordgen.cpp
[ 94%] Linking CXX executable example
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/example_dir && /usr/bin/cmake -E cmake_link_script CMakeFiles/example.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/example.dir/example.cpp.o -o example -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf ../libcoordgen.so.1.4.0 /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so /usr/lib/arm-linux-gnueabihf/libboost_system.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target example
[100%] Linking CXX executable test_coordgen
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_coordgen.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test_coordgen.dir/test_coordgen.cpp.o -o test_coordgen -Wl,-rpath,/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf ../libcoordgen.so.1.4.0 -lmaeparser /usr/lib/arm-linux-gnueabihf/libboost_unit_test_framework.so /usr/lib/arm-linux-gnueabihf/libboost_filesystem.so /usr/lib/arm-linux-gnueabihf/libboost_system.so
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target test_coordgen
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test -a
cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
Start 1: example
Start 2: test_coordgen
1/2 Test #1: example .......................... Passed 0.01 sec
2/2 Test #2: test_coordgen .................... Passed 0.78 sec
100% tests passed, 0 tests failed out of 2
Total Test time (real) = 0.79 sec
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
create-stamp debian/debhelper-build-stamp
dh_testroot -a
dh_prep -a
rm -f -- debian/libcoordgen-dev.substvars debian/libcoordgen1.substvars
rm -fr -- debian/.debhelper/generated/libcoordgen-dev/ debian/libcoordgen-dev/ debian/tmp/ debian/.debhelper/generated/libcoordgen1/ debian/libcoordgen1/
dh_installdirs -a
install -d debian/libcoordgen-dev/usr/include debian/libcoordgen-dev/usr/lib
install -d debian/libcoordgen1/usr/lib
dh_auto_install -a
install -d /<<PKGBUILDDIR>>/debian/tmp
cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[1]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenConfig.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenFragmentBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenFragmenter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenMacrocycleBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/CoordgenMinimizer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerAtom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerBendInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerBond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerClashInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerEZConstrainInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerFragment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerMarchingSquares.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerMaths.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerMolecule.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerResidue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerResidueInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerRing.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/coordgen/sketcherMinimizerStretchInteraction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/coordgen-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/arm-linux-gnueabihf/cmake/coordgen-config-none.cmake
make[1]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_install -a
cp --reflink=auto -a debian/tmp/usr/include/coordgen debian/libcoordgen-dev//usr/include/
install -d debian/libcoordgen-dev//usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/cmake debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so debian/libcoordgen-dev//usr/lib/arm-linux-gnueabihf/
install -d debian/libcoordgen-dev/usr/share/coordgen
cp --reflink=auto -a ./templates.mae debian/libcoordgen-dev/usr/share/coordgen/
install -d debian/.debhelper/generated/libcoordgen-dev
install -d debian/libcoordgen1//usr/lib/arm-linux-gnueabihf
cp --reflink=auto -a debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1 debian/tmp/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0 debian/libcoordgen1//usr/lib/arm-linux-gnueabihf/
install -d debian/.debhelper/generated/libcoordgen1
dh_installdocs -a
install -d debian/libcoordgen-dev/usr/share/doc/libcoordgen-dev
install -p -m0644 debian/copyright debian/libcoordgen-dev/usr/share/doc/libcoordgen-dev/copyright
install -d debian/libcoordgen1/usr/share/doc/libcoordgen1
cp --reflink=auto -a ./README.md debian/libcoordgen1/usr/share/doc/libcoordgen1
chmod -R u\+rw,go=rX debian/libcoordgen1/usr/share/doc
install -p -m0644 debian/copyright debian/libcoordgen1/usr/share/doc/libcoordgen1/copyright
dh_installchangelogs -a
install -p -m0644 debian/changelog debian/libcoordgen1/usr/share/doc/libcoordgen1/changelog.Debian
install -p -m0644 debian/changelog debian/libcoordgen-dev/usr/share/doc/libcoordgen-dev/changelog.Debian
dh_installexamples -a
install -d debian/libcoordgen-dev/usr/share/doc/libcoordgen-dev/examples
cp --reflink=auto -a ./example_dir/example.cpp debian/libcoordgen-dev/usr/share/doc/libcoordgen-dev/examples
dh_perl -a
dh_link -a
rm -f debian/libcoordgen-dev/usr/lib/arm-linux-gnueabihf/libcoordgen.so
ln -s libcoordgen.so.1 debian/libcoordgen-dev/usr/lib/arm-linux-gnueabihf/libcoordgen.so
rm -f debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1
ln -s libcoordgen.so.1.4.0 debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1
dh_strip_nondeterminism -a
dh_compress -a
cd debian/libcoordgen-dev
cd debian/libcoordgen1
chmod a-x usr/share/doc/libcoordgen-dev/changelog.Debian
chmod a-x usr/share/doc/libcoordgen1/README.md usr/share/doc/libcoordgen1/changelog.Debian
gzip -9nf usr/share/doc/libcoordgen1/README.md usr/share/doc/libcoordgen1/changelog.Debian
gzip -9nf usr/share/doc/libcoordgen-dev/changelog.Debian
cd '/<<PKGBUILDDIR>>'
cd '/<<PKGBUILDDIR>>'
dh_fixperms -a
find debian/libcoordgen-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libcoordgen1 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/libcoordgen1/usr/share/doc -type f -a -true -a ! -regex 'debian/libcoordgen1/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libcoordgen-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcoordgen-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libcoordgen1/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libcoordgen-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/libcoordgen1 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libcoordgen-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libcoordgen1/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/libcoordgen-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/libcoordgen-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
dh_missing -a
dh_dwz -a -a
dwz -- debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0
dh_strip -a -a
install -d debian/.debhelper/libcoordgen1/dbgsym-root/usr/lib/debug/.build-id/8e
objcopy --only-keep-debug --compress-debug-sections debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0 debian/.debhelper/libcoordgen1/dbgsym-root/usr/lib/debug/.build-id/8e/551e568fa6676c04eb6b71984ddc899e41ce25.debug
chmod 0644 -- debian/.debhelper/libcoordgen1/dbgsym-root/usr/lib/debug/.build-id/8e/551e568fa6676c04eb6b71984ddc899e41ce25.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0
objcopy --add-gnu-debuglink debian/.debhelper/libcoordgen1/dbgsym-root/usr/lib/debug/.build-id/8e/551e568fa6676c04eb6b71984ddc899e41ce25.debug debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0
install -d debian/.debhelper/libcoordgen1/dbgsym-root/usr/share/doc
ln -s libcoordgen1 debian/.debhelper/libcoordgen1/dbgsym-root/usr/share/doc/libcoordgen1-dbgsym
dh_makeshlibs -a -a
rm -f debian/libcoordgen-dev/DEBIAN/shlibs
rm -f debian/libcoordgen1/DEBIAN/shlibs
install -d debian/libcoordgen1/DEBIAN
echo "libcoordgen 1 libcoordgen1 (>= 1.4.0)" >> debian/libcoordgen1/DEBIAN/shlibs
chmod 0644 -- debian/libcoordgen1/DEBIAN/shlibs
mv debian/.debhelper/generated/libcoordgen1/triggers.new debian/.debhelper/generated/libcoordgen1/triggers
dh_shlibdeps -a -a
dpkg-shlibdeps -Tdebian/libcoordgen1.substvars debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libcoordgen1/usr/lib/arm-linux-gnueabihf/libcoordgen.so.1.4.0 found in none of the libraries
dh_installdeb -a
install -d debian/libcoordgen-dev/DEBIAN
install -p -m0644 debian/.debhelper/generated/libcoordgen1/triggers debian/libcoordgen1/DEBIAN/triggers
dh_gencontrol -a
echo misc:Depends= >> debian/libcoordgen-dev.substvars
echo misc:Pre-Depends= >> debian/libcoordgen-dev.substvars
dpkg-gencontrol -plibcoordgen-dev -ldebian/changelog -Tdebian/libcoordgen-dev.substvars -Pdebian/libcoordgen-dev
echo misc:Depends= >> debian/libcoordgen1.substvars
echo misc:Pre-Depends= >> debian/libcoordgen1.substvars
install -d debian/.debhelper/libcoordgen1/dbgsym-root/DEBIAN
dpkg-gencontrol -plibcoordgen1 -ldebian/changelog -Tdebian/libcoordgen1.substvars -Pdebian/.debhelper/libcoordgen1/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=libcoordgen1-dbgsym "-DDepends=libcoordgen1 (= \${binary:Version})" "-DDescription=debug symbols for libcoordgen1" -DBuild-Ids=8e551e568fa6676c04eb6b71984ddc899e41ce25 -DSection=debug -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/libcoordgen1/dbgsym-root/DEBIAN/control
dpkg-gencontrol -plibcoordgen1 -ldebian/changelog -Tdebian/libcoordgen1.substvars -Pdebian/libcoordgen1
chmod 0644 -- debian/libcoordgen-dev/DEBIAN/control
chmod 0644 -- debian/libcoordgen1/DEBIAN/control
dh_md5sums -a
cd debian/libcoordgen-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/libcoordgen1 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/libcoordgen1/DEBIAN/md5sums
cd debian/.debhelper/libcoordgen1/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/libcoordgen-dev/DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/libcoordgen1/dbgsym-root/DEBIAN/md5sums
dh_builddeb -a
dpkg-deb --root-owner-group --build debian/libcoordgen-dev ..
dpkg-deb --root-owner-group --build debian/libcoordgen1 ..
dpkg-deb --root-owner-group --build debian/.debhelper/libcoordgen1/dbgsym-root ..
dpkg-deb: building package 'libcoordgen-dev' in '../libcoordgen-dev_1.4.0-2_armhf.deb'.
dpkg-deb: building package 'libcoordgen1' in '../libcoordgen1_1.4.0-2_armhf.deb'.
dpkg-deb: building package 'libcoordgen1-dbgsym' in '../libcoordgen1-dbgsym_1.4.0-2_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian 2019 test autobuilder <root@raspbian.org> >../schroedinger-coordgenlibs_1.4.0-2_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-05-17T17:47:52Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
schroedinger-coordgenlibs_1.4.0-2_armhf.changes:
------------------------------------------------
Format: 1.8
Date: Tue, 12 May 2020 04:17:28 -0400
Source: schroedinger-coordgenlibs
Binary: libcoordgen-dev libcoordgen1 libcoordgen1-dbgsym
Architecture: armhf
Version: 1.4.0-2
Distribution: bullseye-staging
Urgency: medium
Maintainer: Raspbian 2019 test autobuilder <root@raspbian.org>
Changed-By: Andrius Merkys <merkys@debian.org>
Description:
libcoordgen-dev - 2D coordinate generation for chemical compounds - header files
libcoordgen1 - 2D coordinate generation for chemical compounds
Changes:
schroedinger-coordgenlibs (1.4.0-2) unstable; urgency=medium
.
* Team upload.
* Installing templates.mae to usr/share/coordgen.
* Bumping debhelper compat (no changes).
* Adding 'Rules-Requires-Root: no'.
Checksums-Sha1:
f80752909d86f1c228b6242255c80c9f67ff5773 44844 libcoordgen-dev_1.4.0-2_armhf.deb
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+------------------------------------------------------------------------------+
| Buildinfo |
+------------------------------------------------------------------------------+
Format: 1.0
Source: schroedinger-coordgenlibs
Binary: libcoordgen-dev libcoordgen1
Architecture: armhf
Version: 1.4.0-2
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Build-Origin: Raspbian
Build-Architecture: armhf
Build-Date: Sun, 17 May 2020 17:47:50 +0000
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LANG="en_GB.UTF-8"
LC_ALL="POSIX"
SOURCE_DATE_EPOCH="1589271448"
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
libcoordgen-dev_1.4.0-2_armhf.deb
---------------------------------
new Debian package, version 2.0.
size 44844 bytes: control archive=1448 bytes.
726 bytes, 19 lines control
2164 bytes, 26 lines md5sums
Package: libcoordgen-dev
Source: schroedinger-coordgenlibs
Version: 1.4.0-2
Architecture: armhf
Maintainer: Debian Science Team <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 279
Depends: libcoordgen1 (= 1.4.0-2)
Breaks: libschroedinger-coordgenlibs-dev
Replaces: libschroedinger-coordgenlibs-dev
Section: libdevel
Priority: optional
Multi-Arch: same
Homepage: https://github.com/schrodinger/coordgenlibs
Description: 2D coordinate generation for chemical compounds - header files
This package provides the Open Source release of Schroedinger's routines
for the 2D coordinate representation of chemical compounds.
.
This package provides header files for developing against the API of that
library.
drwxr-xr-x root/root 0 2020-05-12 08:17 ./
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-rw-r--r-- root/root 6695 2020-03-16 20:41 ./usr/include/coordgen/CoordgenFragmentBuilder.h
-rw-r--r-- root/root 4555 2020-03-16 20:41 ./usr/include/coordgen/CoordgenFragmenter.h
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-rw-r--r-- root/root 24240 2020-03-16 20:41 ./usr/include/coordgen/sketcherMinimizerMaths.h
-rw-r--r-- root/root 3854 2020-03-16 20:41 ./usr/include/coordgen/sketcherMinimizerMolecule.h
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-rw-r--r-- root/root 1053 2020-03-16 20:41 ./usr/include/coordgen/sketcherMinimizerResidueInteraction.h
-rw-r--r-- root/root 2278 2020-03-16 20:41 ./usr/include/coordgen/sketcherMinimizerRing.h
-rw-r--r-- root/root 1394 2020-03-16 20:41 ./usr/include/coordgen/sketcherMinimizerStretchInteraction.h
drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/lib/
drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/lib/arm-linux-gnueabihf/
drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/lib/arm-linux-gnueabihf/cmake/
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-rw-r--r-- root/root 3508 2020-05-12 08:17 ./usr/lib/arm-linux-gnueabihf/cmake/coordgen-config.cmake
lrwxrwxrwx root/root 0 2020-05-12 08:17 ./usr/lib/arm-linux-gnueabihf/libcoordgen.so -> libcoordgen.so.1
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-rw-r--r-- root/root 1849 2020-04-06 07:42 ./usr/share/doc/libcoordgen-dev/copyright
drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/share/doc/libcoordgen-dev/examples/
-rw-r--r-- root/root 771 2020-03-16 20:41 ./usr/share/doc/libcoordgen-dev/examples/example.cpp
libcoordgen1-dbgsym_1.4.0-2_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 3064640 bytes: control archive=568 bytes.
421 bytes, 13 lines control
106 bytes, 1 lines md5sums
Package: libcoordgen1-dbgsym
Source: schroedinger-coordgenlibs
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Auto-Built-Package: debug-symbols
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Installed-Size: 3107
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Section: debug
Priority: optional
Multi-Arch: same
Description: debug symbols for libcoordgen1
Build-Ids: 8e551e568fa6676c04eb6b71984ddc899e41ce25
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lrwxrwxrwx root/root 0 2020-05-12 08:17 ./usr/share/doc/libcoordgen1-dbgsym -> libcoordgen1
libcoordgen1_1.4.0-2_armhf.deb
------------------------------
new Debian package, version 2.0.
size 163764 bytes: control archive=888 bytes.
642 bytes, 16 lines control
309 bytes, 4 lines md5sums
38 bytes, 1 lines shlibs
63 bytes, 2 lines triggers
Package: libcoordgen1
Source: schroedinger-coordgenlibs
Version: 1.4.0-2
Architecture: armhf
Maintainer: Debian Science Team <debian-science-maintainers@lists.alioth.debian.org>
Installed-Size: 460
Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.5), libstdc++6 (>= 5.2)
Breaks: libschroedinger-coordgenlibs1
Replaces: libschroedinger-coordgenlibs1
Section: libs
Priority: optional
Multi-Arch: same
Homepage: https://github.com/schrodinger/coordgenlibs
Description: 2D coordinate generation for chemical compounds
This package provides the Open Source release of Schroedinger's routines
for the 2D coordinate representation of chemical compounds.
drwxr-xr-x root/root 0 2020-05-12 08:17 ./
drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/
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drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/share/
drwxr-xr-x root/root 0 2020-05-12 08:17 ./usr/share/doc/
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-rw-r--r-- root/root 2255 2020-03-16 20:41 ./usr/share/doc/libcoordgen1/README.md.gz
-rw-r--r-- root/root 1037 2020-05-12 08:17 ./usr/share/doc/libcoordgen1/changelog.Debian.gz
-rw-r--r-- root/root 1849 2020-04-06 07:42 ./usr/share/doc/libcoordgen1/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build Type: any
Build-Space: 55796
Build-Time: 175
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 500
Job: schroedinger-coordgenlibs_1.4.0-2
Machine Architecture: armhf
Package: schroedinger-coordgenlibs
Package-Time: 739
Source-Version: 1.4.0-2
Space: 55796
Status: successful
Version: 1.4.0-2
--------------------------------------------------------------------------------
Finished at 2020-05-17T17:47:52Z
Build needed 00:12:19, 55796k disk space