Raspbian Package Auto-Building

rdkit → 202303.3-3 → armhf → 2023-09-29 11:10:05

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04

+==============================================================================+
| rdkit 202303.3-3 (armhf)                     Fri, 29 Sep 2023 03:05:50 +0000 |
+==============================================================================+

Package: rdkit
Version: 202303.3-3
Source Version: 202303.3-3
Distribution: trixie-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/trixie-staging-armhf-sbuild-f897c852-e96e-4331-be5b-96fc7213d8f6' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.4.1/private trixie-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private trixie-staging/main Sources [14.1 MB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf Packages [14.7 MB]
Fetched 28.8 MB in 29s (982 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/trixie-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'rdkit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/rdkit.git
Please use:
git clone https://salsa.debian.org/debichem-team/rdkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 62.3 MB of source archives.
Get:1 http://172.17.4.1/private trixie-staging/main rdkit 202303.3-3 (dsc) [2852 B]
Get:2 http://172.17.4.1/private trixie-staging/main rdkit 202303.3-3 (tar) [62.2 MB]
Get:3 http://172.17.4.1/private trixie-staging/main rdkit 202303.3-3 (diff) [102 kB]
Fetched 62.3 MB in 5s (11.4 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/rdkit-6sqwvb/rdkit-202303.3' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/rdkit-6sqwvb' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-UzhxkN/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-UzhxkN/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-UzhxkN/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2613 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap netbase sensible-utils sgml-base util-linux-extra
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 16 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (22.9 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 11775 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: bison, catch2, cmake, debhelper-compat (= 13), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libcairo2-dev, libcoordgen-dev, libeigen3-dev, libfreetype-dev, libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-myst-parser, python3-numpy, python3-pandas, python3-pil | python3-imaging, python3-recommonmark, python3-sphinx, python3-sqlalchemy, rapidjson-dev, tex-gyre, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Filtered Build-Depends: bison, catch2, cmake, debhelper-compat (= 13), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libcairo2-dev, libcoordgen-dev, libeigen3-dev, libfreetype-dev, libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-myst-parser, python3-numpy, python3-pandas, python3-pil, python3-recommonmark, python3-sphinx, python3-sqlalchemy, rapidjson-dev, tex-gyre, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
dpkg-deb: building package 'sbuild-build-depends-rdkit-dummy' in '/<<BUILDDIR>>/resolver-UzhxkN/apt_archive/sbuild-build-depends-rdkit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-rdkit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Sources [750 B]
Get:5 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ Packages [816 B]
Fetched 2899 B in 1s (3920 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install rdkit build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libpam-cap util-linux-extra
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bison bsdextrautils
  ca-certificates catch2 clang-15 cmake cmake-data debhelper dh-autoreconf
  dh-python dh-strip-nondeterminism docutils-common doxygen dwz file flex
  fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
  fonts-lmodern gettext gettext-base groff-base hicolor-icon-theme
  icu-devtools imagemagick imagemagick-6-common imagemagick-6.q16
  intltool-debian latexmk libapache-pom-java libarchive-zip-perl libarchive13
  libblas3 libblkid-dev libboost-atomic1.74-dev libboost-atomic1.74.0
  libboost-chrono1.74-dev libboost-chrono1.74.0 libboost-date-time1.74-dev
  libboost-date-time1.74.0 libboost-dev libboost-iostreams-dev
  libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-python-dev
  libboost-python1.74-dev libboost-python1.74.0 libboost-regex-dev
  libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev
  libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev
  libboost-system1.74.0 libboost-thread-dev libboost-thread1.74-dev
  libboost-thread1.74.0 libboost1.74-dev libbrotli-dev libbrotli1 libbsd0
  libbz2-dev libcairo-gobject2 libcairo-script-interpreter2 libcairo2
  libcairo2-dev libclang-common-15-dev libclang-cpp14 libclang-cpp15
  libclang1-14 libclang1-15 libcommons-logging-java libcommons-parent-java
  libcoordgen-dev libcoordgen3 libcurl3-nss libcurl4 libdatrie1 libdav1d6
  libde265-0 libdebhelper-perl libdeflate0 libedit2 libeigen3-dev libelf1
  libexpat1 libexpat1-dev libffi-dev libfftw3-double3
  libfile-stripnondeterminism-perl libfontbox-java libfontconfig-dev
  libfontconfig1 libfontenc1 libfreetype-dev libfreetype6 libfribidi0 libgc1
  libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
  libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin
  libgraphite2-3 libharfbuzz0b libheif-plugin-dav1d libheif-plugin-libde265
  libheif1 libice-dev libice6 libicu-dev libicu72 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjs-underscore libjson-perl
  libjsoncpp25 libkpathsea6 liblapack3 liblcms2-2 liblerc4 libllvm14 libllvm15
  liblqr-1-0 libltdl7 liblua5.3-0 liblzo2-2 libmaeparser-dev libmaeparser1
  libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6
  libmount-dev libncurses-dev libncurses6 libnghttp2-14 libnspr4 libnss3
  libobjc-12-dev libobjc4 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0
  libpcre2-dev libpcre2-posix3 libpdfbox-java libpfm4 libpipeline1
  libpixman-1-0 libpixman-1-dev libpkgconf3 libpng-dev libpng16-16 libpotrace0
  libpq-dev libpq5 libproc2-0 libpsl5 libptexenc1 libpthread-stubs0-dev
  libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev
  libpython3.11-minimal libpython3.11-stdlib libraqm0 librhash0 librsvg2-2
  librsvg2-bin librtmp1 libselinux1-dev libsepol-dev libsharpyuv0 libsm-dev
  libsm6 libsqlite3-dev libssh2-1 libssl-dev libssl3 libsub-override-perl
  libsynctex2 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtool
  libuchardet0 libuv1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx11-dev libxapian30 libxau-dev libxau6 libxaw7 libxcb-render0
  libxcb-render0-dev libxcb-shm0 libxcb-shm0-dev libxcb1 libxcb1-dev
  libxdmcp-dev libxdmcp6 libxext-dev libxext6 libxi6 libxml2 libxml2-dev
  libxmu6 libxpm4 libxrender-dev libxrender1 libxt6 libyaml-0-2 libz3-4
  libz3-dev libzzip-0-13 llvm-15 llvm-15-dev llvm-15-linker-tools
  llvm-15-runtime llvm-15-tools m4 mailcap man-db media-types mime-support
  nss-plugin-pem openssl pandoc pandoc-data pkg-config pkgconf pkgconf-bin
  po-debconf postgresql-client-16 postgresql-client-common postgresql-common
  postgresql-server-dev-16 postgresql-server-dev-all preview-latex-style
  procps python-babel-localedata python3 python3-alabaster python3-babel
  python3-certifi python3-chardet python3-charset-normalizer
  python3-commonmark python3-dateutil python3-dev python3-distutils
  python3-docutils python3-greenlet python3-idna python3-imagesize
  python3-jinja2 python3-lib2to3 python3-markdown-it python3-markupsafe
  python3-mdit-py-plugins python3-mdurl python3-minimal python3-myst-parser
  python3-numpy python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pkg-resources python3-pygments python3-recommonmark
  python3-requests python3-roman python3-six python3-snowballstemmer
  python3-sphinx python3-sqlalchemy python3-tz python3-urllib3 python3-yaml
  python3.11 python3.11-dev python3.11-minimal rapidjson-dev shared-mime-info
  sphinx-common ssl-cert t1utils tex-common tex-gyre texlive-base
  texlive-binaries texlive-fonts-recommended texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures ucf uuid-dev
  x11-common x11proto-core-dev x11proto-dev xdg-utils xfonts-encodings
  xfonts-utils xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc clang-15-doc wasi-libc
  cmake-doc cmake-format elpa-cmake-mode ninja-build dh-make flit
  python3-build python3-installer python3-wheel doxygen-latex doxygen-doc
  doxygen-gui graphviz flex-doc gettext-doc libasprintf-dev libgettextpo-dev
  groff imagemagick-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg
  gimp gnuplot grads hp2xx html2ps libwmf-bin mplayer povray radiance
  sane-utils transfig ufraw-batch ghostscript lrzip libboost-doc
  libboost1.74-doc gccxml libboost-container1.74-dev libboost-context1.74-dev
  libboost-contract1.74-dev libboost-coroutine1.74-dev
  libboost-exception1.74-dev libboost-fiber1.74-dev
  libboost-filesystem1.74-dev libboost-graph1.74-dev
  libboost-graph-parallel1.74-dev libboost-locale1.74-dev libboost-log1.74-dev
  libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev
  libboost-numpy1.74-dev libboost-program-options1.74-dev
  libboost-random1.74-dev libboost-stacktrace1.74-dev libboost-test1.74-dev
  libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev
  libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev
  libcairo2-doc libavalon-framework-java libcommons-logging-java-doc
  libexcalibur-logkit-java liblog4j1.2-java libeigen3-doc libfftw3-bin
  libfftw3-dev freetype2-doc low-memory-monitor libgirepository1.0-dev
  libglib2.0-doc libgdk-pixbuf2.0-bin libxml2-utils libheif-plugin-rav1e
  libheif-plugin-svtenc libice-doc icu-doc liblcms2-utils
  libmagickcore-6.q16-6-extra ncurses-doc postgresql-doc-16 libsm-doc
  sqlite3-doc libssl-doc libtool-doc gfortran | fortran95-compiler gcj-jdk
  libx11-doc xapian-tools libxcb-doc libxext-doc llvm-15-doc m4-doc apparmor
  less www-browser texlive-xetex texlive-luatex pandoc-citeproc context
  wkhtmltopdf ghc nodejs php python ruby r-base-core libjs-mathjax libjs-katex
  citation-style-language-styles libmail-box-perl postgresql-16 python3-doc
  python3-tk python3-venv python-charset-normalizer-doc docutils-doc
  fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
  python-greenlet-dev python-greenlet-doc python-jinja2-doc gfortran
  python3-pytest python-pandas-doc python3-statsmodels python-pil-doc
  python3-setuptools python-pygments-doc ttf-bitstream-vera
  python3-cryptography python3-openssl python3-socks python-requests-doc
  python3-stemmer dvipng fonts-freefont-otf python3-sphinx-rtd-theme
  sphinx-doc texlive-plain-generic python-sqlalchemy-doc python3-fdb
  python3-pymssql python3-mysqldb python3-psycopg2 python3-asyncpg
  python3-aiosqlite python3-brotli python3.11-venv python3.11-doc
  binfmt-support rapidjson-doc gv | postscript-viewer perl-tk xpdf
  | pdf-viewer xzdec texlive-binaries-sse2 texlive-fonts-recommended-doc
  texlive-latex-base-doc wp2latex icc-profiles libfile-which-perl
  texlive-latex-extra-doc texlive-science texlive-latex-recommended-doc
  texlive-pstricks dot2tex prerex texlive-pictures-doc vprerex
Recommended packages:
  libfl-dev curl | wget | lynx libmagickcore-6.q16-6-extra ghostscript netpbm
  xpdf | pdf-viewer gv | postscript-viewer bzip2-doc libarchive-cpio-perl
  libgdk-pixbuf2.0-bin xdg-user-dirs libheif-plugin-aomenc libheif-plugin-x265
  javascript-common libjson-xs-perl gsfonts libgpm2 libpng-tools publicsuffix
  librsvg2-common libltdl-dev binfmt-support | systemd libmail-sendmail-perl
  logrotate psmisc python3-scipy python3-matplotlib python3-bottleneck
  python3-numexpr python3-odf python3-openpyxl python3-bs4 python3-html5lib
  python3-lxml python3-tables python3-olefile python3-sqlalchemy-ext
  fonts-texgyre fonts-texgyre-math lmodern dvisvgm tipa default-jre
  libspreadsheet-parseexcel-perl texlive-plain-generic ruby tk
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bison bsdextrautils
  ca-certificates catch2 clang-15 cmake cmake-data debhelper dh-autoreconf
  dh-python dh-strip-nondeterminism docutils-common doxygen dwz file flex
  fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono
  fonts-lmodern gettext gettext-base groff-base hicolor-icon-theme
  icu-devtools imagemagick imagemagick-6-common imagemagick-6.q16
  intltool-debian latexmk libapache-pom-java libarchive-zip-perl libarchive13
  libblas3 libblkid-dev libboost-atomic1.74-dev libboost-atomic1.74.0
  libboost-chrono1.74-dev libboost-chrono1.74.0 libboost-date-time1.74-dev
  libboost-date-time1.74.0 libboost-dev libboost-iostreams-dev
  libboost-iostreams1.74-dev libboost-iostreams1.74.0 libboost-python-dev
  libboost-python1.74-dev libboost-python1.74.0 libboost-regex-dev
  libboost-regex1.74-dev libboost-regex1.74.0 libboost-serialization1.74-dev
  libboost-serialization1.74.0 libboost-system-dev libboost-system1.74-dev
  libboost-system1.74.0 libboost-thread-dev libboost-thread1.74-dev
  libboost-thread1.74.0 libboost1.74-dev libbrotli-dev libbrotli1 libbsd0
  libbz2-dev libcairo-gobject2 libcairo-script-interpreter2 libcairo2
  libcairo2-dev libclang-common-15-dev libclang-cpp14 libclang-cpp15
  libclang1-14 libclang1-15 libcommons-logging-java libcommons-parent-java
  libcoordgen-dev libcoordgen3 libcurl3-nss libcurl4 libdatrie1 libdav1d6
  libde265-0 libdebhelper-perl libdeflate0 libedit2 libeigen3-dev libelf1
  libexpat1 libexpat1-dev libffi-dev libfftw3-double3
  libfile-stripnondeterminism-perl libfontbox-java libfontconfig-dev
  libfontconfig1 libfontenc1 libfreetype-dev libfreetype6 libfribidi0 libgc1
  libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
  libglib2.0-bin libglib2.0-data libglib2.0-dev libglib2.0-dev-bin
  libgraphite2-3 libharfbuzz0b libheif-plugin-dav1d libheif-plugin-libde265
  libheif1 libice-dev libice6 libicu-dev libicu72 libimagequant0 libjbig0
  libjpeg62-turbo libjs-jquery libjs-sphinxdoc libjs-underscore libjson-perl
  libjsoncpp25 libkpathsea6 liblapack3 liblcms2-2 liblerc4 libllvm14 libllvm15
  liblqr-1-0 libltdl7 liblua5.3-0 liblzo2-2 libmaeparser-dev libmaeparser1
  libmagic-mgc libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6
  libmount-dev libncurses-dev libncurses6 libnghttp2-14 libnspr4 libnss3
  libobjc-12-dev libobjc4 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0
  libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre2-16-0 libpcre2-32-0
  libpcre2-dev libpcre2-posix3 libpdfbox-java libpfm4 libpipeline1
  libpixman-1-0 libpixman-1-dev libpkgconf3 libpng-dev libpng16-16 libpotrace0
  libpq-dev libpq5 libproc2-0 libpsl5 libptexenc1 libpthread-stubs0-dev
  libpython3-dev libpython3-stdlib libpython3.11 libpython3.11-dev
  libpython3.11-minimal libpython3.11-stdlib libraqm0 librhash0 librsvg2-2
  librsvg2-bin librtmp1 libselinux1-dev libsepol-dev libsharpyuv0 libsm-dev
  libsm6 libsqlite3-dev libssh2-1 libssl-dev libsub-override-perl libsynctex2
  libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtool libuchardet0
  libuv1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libx11-dev
  libxapian30 libxau-dev libxau6 libxaw7 libxcb-render0 libxcb-render0-dev
  libxcb-shm0 libxcb-shm0-dev libxcb1 libxcb1-dev libxdmcp-dev libxdmcp6
  libxext-dev libxext6 libxi6 libxml2 libxml2-dev libxmu6 libxpm4
  libxrender-dev libxrender1 libxt6 libyaml-0-2 libz3-4 libz3-dev libzzip-0-13
  llvm-15 llvm-15-dev llvm-15-linker-tools llvm-15-runtime llvm-15-tools m4
  mailcap man-db media-types mime-support nss-plugin-pem openssl pandoc
  pandoc-data pkg-config pkgconf pkgconf-bin po-debconf postgresql-client-16
  postgresql-client-common postgresql-common postgresql-server-dev-16
  postgresql-server-dev-all preview-latex-style procps python-babel-localedata
  python3 python3-alabaster python3-babel python3-certifi python3-chardet
  python3-charset-normalizer python3-commonmark python3-dateutil python3-dev
  python3-distutils python3-docutils python3-greenlet python3-idna
  python3-imagesize python3-jinja2 python3-lib2to3 python3-markdown-it
  python3-markupsafe python3-mdit-py-plugins python3-mdurl python3-minimal
  python3-myst-parser python3-numpy python3-packaging python3-pandas
  python3-pandas-lib python3-pil python3-pkg-resources python3-pygments
  python3-recommonmark python3-requests python3-roman python3-six
  python3-snowballstemmer python3-sphinx python3-sqlalchemy python3-tz
  python3-urllib3 python3-yaml python3.11 python3.11-dev python3.11-minimal
  rapidjson-dev sbuild-build-depends-rdkit-dummy shared-mime-info
  sphinx-common ssl-cert t1utils tex-common tex-gyre texlive-base
  texlive-binaries texlive-fonts-recommended texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures ucf uuid-dev
  x11-common x11proto-core-dev x11proto-dev xdg-utils xfonts-encodings
  xfonts-utils xml-core xorg-sgml-doctools xtrans-dev zlib1g-dev
The following packages will be upgraded:
  libssl3
1 upgraded, 335 newly installed, 0 to remove and 15 not upgraded.
Need to get 392 MB of archives.
After this operation, 1945 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-UzhxkN/apt_archive ./ sbuild-build-depends-rdkit-dummy 0.invalid.0 [1108 B]
Get:2 http://172.17.4.1/private trixie-staging/main armhf m4 armhf 1.4.19-4 [256 kB]
Get:3 http://172.17.4.1/private trixie-staging/main armhf flex armhf 2.6.4-8.2 [391 kB]
Get:4 http://172.17.4.1/private trixie-staging/main armhf libfftw3-double3 armhf 3.3.10-1 [325 kB]
Get:5 http://172.17.4.1/private trixie-staging/main armhf libexpat1 armhf 2.5.0-2 [76.8 kB]
Get:6 http://172.17.4.1/private trixie-staging/main armhf libbrotli1 armhf 1.0.9-2+b3 [258 kB]
Get:7 http://172.17.4.1/private trixie-staging/main armhf libpng16-16 armhf 1.6.40-1 [258 kB]
Get:8 http://172.17.4.1/private trixie-staging/main armhf libfreetype6 armhf 2.13.2+dfsg-1 [366 kB]
Get:9 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-mono all 2.37-8 [489 kB]
Get:10 http://172.17.4.1/private trixie-staging/main armhf fonts-dejavu-core all 2.37-8 [840 kB]
Get:11 http://172.17.4.1/private trixie-staging/main armhf fontconfig-config armhf 2.14.2-6 [316 kB]
Get:12 http://172.17.4.1/private trixie-staging/main armhf libfontconfig1 armhf 2.14.2-6 [367 kB]
Get:13 http://172.17.4.1/private trixie-staging/main armhf libdav1d6 armhf 1.2.1-2+rpi1 [214 kB]
Get:14 http://172.17.4.1/private trixie-staging/main armhf libheif-plugin-dav1d armhf 1.16.2-2 [8864 B]
Get:15 http://172.17.4.1/private trixie-staging/main armhf libde265-0 armhf 1.0.11-1+rpi1+b1 [137 kB]
Get:16 http://172.17.4.1/private trixie-staging/main armhf libheif-plugin-libde265 armhf 1.16.2-2 [11.8 kB]
Get:17 http://172.17.4.1/private trixie-staging/main armhf libheif1 armhf 1.16.2-2 [188 kB]
Get:18 http://172.17.4.1/private trixie-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:19 http://172.17.4.1/private trixie-staging/main armhf libjpeg62-turbo armhf 1:2.1.5-2 [143 kB]
Get:20 http://172.17.4.1/private trixie-staging/main armhf liblcms2-2 armhf 2.14-2 [124 kB]
Get:21 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-0 armhf 2.78.0-2+rpi1 [1249 kB]
Get:22 http://172.17.4.1/private trixie-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:23 http://172.17.4.1/private trixie-staging/main armhf libltdl7 armhf 2.4.7-7 [390 kB]
Get:24 http://172.17.4.1/private trixie-staging/main armhf libopenjp2-7 armhf 2.5.0-2 [164 kB]
Get:25 http://172.17.4.1/private trixie-staging/main armhf libdeflate0 armhf 1.18-1 [38.3 kB]
Get:26 http://172.17.4.1/private trixie-staging/main armhf liblerc4 armhf 4.0.0+ds-3 [133 kB]
Get:27 http://172.17.4.1/private trixie-staging/main armhf libsharpyuv0 armhf 1.3.2-0.3 [106 kB]
Get:28 http://172.17.4.1/private trixie-staging/main armhf libwebp7 armhf 1.3.2-0.3 [261 kB]
Get:29 http://172.17.4.1/private trixie-staging/main armhf libtiff6 armhf 4.5.1+git230720-1 [298 kB]
Get:30 http://172.17.4.1/private trixie-staging/main armhf libwebpdemux2 armhf 1.3.2-0.3 [106 kB]
Get:31 http://172.17.4.1/private trixie-staging/main armhf libwebpmux3 armhf 1.3.2-0.3 [116 kB]
Get:32 http://172.17.4.1/private trixie-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:33 http://172.17.4.1/private trixie-staging/main armhf libbsd0 armhf 0.11.7-4 [111 kB]
Get:34 http://172.17.4.1/private trixie-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:35 http://172.17.4.1/private trixie-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:36 http://172.17.4.1/private trixie-staging/main armhf libx11-data all 2:1.8.6-1 [323 kB]
Get:37 http://172.17.4.1/private trixie-staging/main armhf libx11-6 armhf 2:1.8.6-1 [726 kB]
Get:38 http://172.17.4.1/private trixie-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:39 http://172.17.4.1/private trixie-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:40 http://172.17.4.1/private trixie-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.3 [571 kB]
Get:41 http://172.17.4.1/private trixie-staging/main armhf imagemagick-6-common all 8:6.9.11.60+dfsg-1.6 [165 kB]
Get:42 http://172.17.4.1/private trixie-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.11.60+dfsg-1.6 [1596 kB]
Get:43 http://172.17.4.1/private trixie-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.11.60+dfsg-1.6 [385 kB]
Get:44 http://172.17.4.1/private trixie-staging/main armhf libjson-perl all 4.10000-1 [87.5 kB]
Get:45 http://172.17.4.1/private trixie-staging/main armhf postgresql-client-common all 255 [36.2 kB]
Get:46 http://172.17.4.1/private trixie-staging/main armhf libssl3 armhf 3.0.11-1 [1620 kB]
Get:47 http://172.17.4.1/private trixie-staging/main armhf openssl armhf 3.0.11-1 [1367 kB]
Get:48 http://172.17.4.1/private trixie-staging/main armhf ssl-cert all 1.1.2 [21.1 kB]
Get:49 http://172.17.4.1/private trixie-staging/main armhf ucf all 3.0043+nmu1 [55.2 kB]
Get:50 http://172.17.4.1/private trixie-staging/main armhf postgresql-common all 255 [180 kB]
Get:51 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-minimal armhf 3.11.5-3 [800 kB]
Get:52 http://172.17.4.1/private trixie-staging/main armhf python3.11-minimal armhf 3.11.5-3 [1676 kB]
Get:53 http://172.17.4.1/private trixie-staging/main armhf python3-minimal armhf 3.11.4-5 [26.2 kB]
Get:54 http://172.17.4.1/private trixie-staging/main armhf media-types all 10.1.0 [26.9 kB]
Get:55 http://172.17.4.1/private trixie-staging/main armhf mailcap all 3.70+nmu1 [32.0 kB]
Get:56 http://172.17.4.1/private trixie-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:57 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-stdlib armhf 3.11.5-3 [1675 kB]
Get:58 http://172.17.4.1/private trixie-staging/main armhf python3.11 armhf 3.11.5-3 [582 kB]
Get:59 http://172.17.4.1/private trixie-staging/main armhf libpython3-stdlib armhf 3.11.4-5 [9200 B]
Get:60 http://172.17.4.1/private trixie-staging/main armhf python3 armhf 3.11.4-5 [26.2 kB]
Get:61 http://172.17.4.1/private trixie-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:62 http://172.17.4.1/private trixie-staging/main armhf groff-base armhf 1.23.0-2 [1033 kB]
Get:63 http://172.17.4.1/private trixie-staging/main armhf bsdextrautils armhf 2.39.2-1 [80.5 kB]
Get:64 http://172.17.4.1/private trixie-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:65 http://172.17.4.1/private trixie-staging/main armhf man-db armhf 2.11.2-3 [1342 kB]
Get:66 http://172.17.4.1/private trixie-staging/main armhf libproc2-0 armhf 2:4.0.3-1 [54.2 kB]
Get:67 http://172.17.4.1/private trixie-staging/main armhf procps armhf 2:4.0.3-1 [731 kB]
Get:68 http://172.17.4.1/private trixie-staging/main armhf ca-certificates all 20230311 [153 kB]
Get:69 http://172.17.4.1/private trixie-staging/main armhf libmagic-mgc armhf 1:5.45-2 [314 kB]
Get:70 http://172.17.4.1/private trixie-staging/main armhf libmagic1 armhf 1:5.45-2 [96.1 kB]
Get:71 http://172.17.4.1/private trixie-staging/main armhf file armhf 1:5.45-2 [41.6 kB]
Get:72 http://172.17.4.1/private trixie-staging/main armhf gettext-base armhf 0.21-13 [156 kB]
Get:73 http://172.17.4.1/private trixie-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:74 http://172.17.4.1/private trixie-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:75 http://172.17.4.1/private trixie-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:76 http://172.17.4.1/private trixie-staging/main armhf autopoint all 0.21-13 [496 kB]
Get:77 http://172.17.4.1/private trixie-staging/main armhf bison armhf 2:3.8.2+dfsg-1 [1114 kB]
Get:78 http://172.17.4.1/private trixie-staging/main armhf catch2 armhf 2.13.10-1 [436 kB]
Get:79 http://172.17.4.1/private trixie-staging/main armhf libedit2 armhf 3.1-20230828-1 [76.0 kB]
Get:80 http://172.17.4.1/private trixie-staging/main armhf libz3-4 armhf 4.8.12-3.1 [5797 kB]
Get:81 http://172.17.4.1/private trixie-staging/main armhf libllvm15 armhf 1:15.0.6-4+rpi1+b1 [20.7 MB]
Get:82 http://172.17.4.1/private trixie-staging/main armhf libclang-cpp15 armhf 1:15.0.6-4+rpi1+b1 [9902 kB]
Get:83 http://172.17.4.1/private trixie-staging/main armhf libgc1 armhf 1:8.2.4-1 [231 kB]
Get:84 http://172.17.4.1/private trixie-staging/main armhf libobjc4 armhf 12.2.0-14+rpi1 [33.6 kB]
Get:85 http://172.17.4.1/private trixie-staging/main armhf libobjc-12-dev armhf 12.2.0-14+rpi1 [159 kB]
Get:86 http://172.17.4.1/private trixie-staging/main armhf libclang-common-15-dev armhf 1:15.0.6-4+rpi1+b1 [3474 kB]
Get:87 http://172.17.4.1/private trixie-staging/main armhf llvm-15-linker-tools armhf 1:15.0.6-4+rpi1+b1 [1053 kB]
Get:88 http://172.17.4.1/private trixie-staging/main armhf libclang1-15 armhf 1:15.0.6-4+rpi1+b1 [5382 kB]
Get:89 http://172.17.4.1/private trixie-staging/main armhf clang-15 armhf 1:15.0.6-4+rpi1+b1 [99.2 kB]
Get:90 http://172.17.4.1/private trixie-staging/main armhf libarchive13 armhf 3.6.2-1 [293 kB]
Get:91 http://172.17.4.1/private trixie-staging/main armhf libnghttp2-14 armhf 1.56.0-1 [60.5 kB]
Get:92 http://172.17.4.1/private trixie-staging/main armhf libpsl5 armhf 0.21.2-1+b1 [57.8 kB]
Get:93 http://172.17.4.1/private trixie-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:94 http://172.17.4.1/private trixie-staging/main armhf libssh2-1 armhf 1.11.0-2 [195 kB]
Get:95 http://172.17.4.1/private trixie-staging/main armhf libcurl4 armhf 7.88.1-10+rpi1 [343 kB]
Get:96 http://172.17.4.1/private trixie-staging/main armhf libjsoncpp25 armhf 1.9.5-6 [64.7 kB]
Get:97 http://172.17.4.1/private trixie-staging/main armhf librhash0 armhf 1.4.3-3 [142 kB]
Get:98 http://172.17.4.1/private trixie-staging/main armhf libuv1 armhf 1.44.2-1+rpi1 [125 kB]
Get:99 http://172.17.4.1/private trixie-staging/main armhf cmake-data all 3.27.6-1 [2103 kB]
Get:100 http://172.17.4.1/private trixie-staging/main armhf cmake armhf 3.27.6-1 [7746 kB]
Get:101 http://172.17.4.1/private trixie-staging/main armhf libdebhelper-perl all 13.11.6 [81.9 kB]
Get:102 http://172.17.4.1/private trixie-staging/main armhf libtool all 2.4.7-7 [517 kB]
Get:103 http://172.17.4.1/private trixie-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:104 http://172.17.4.1/private trixie-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:105 http://172.17.4.1/private trixie-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:106 http://172.17.4.1/private trixie-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:107 http://172.17.4.1/private trixie-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:108 http://172.17.4.1/private trixie-staging/main armhf libelf1 armhf 0.188-2.1+rpi1 [171 kB]
Get:109 http://172.17.4.1/private trixie-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:110 http://172.17.4.1/private trixie-staging/main armhf gettext armhf 0.21-13 [1201 kB]
Get:111 http://172.17.4.1/private trixie-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:112 http://172.17.4.1/private trixie-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:113 http://172.17.4.1/private trixie-staging/main armhf debhelper all 13.11.6 [952 kB]
Get:114 http://172.17.4.1/private trixie-staging/main armhf python3-lib2to3 all 3.11.5-1 [77.5 kB]
Get:115 http://172.17.4.1/private trixie-staging/main armhf python3-distutils all 3.11.5-1 [131 kB]
Get:116 http://172.17.4.1/private trixie-staging/main armhf dh-python all 6.20230825 [106 kB]
Get:117 http://172.17.4.1/private trixie-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:118 http://172.17.4.1/private trixie-staging/main armhf docutils-common all 0.19+dfsg-7 [127 kB]
Get:119 http://172.17.4.1/private trixie-staging/main armhf libllvm14 armhf 1:14.0.6-16+rpi1 [19.5 MB]
Get:120 http://172.17.4.1/private trixie-staging/main armhf libclang-cpp14 armhf 1:14.0.6-16+rpi1 [9466 kB]
Get:121 http://172.17.4.1/private trixie-staging/main armhf libclang1-14 armhf 1:14.0.6-16+rpi1 [5212 kB]
Get:122 http://172.17.4.1/private trixie-staging/main armhf libxapian30 armhf 1.4.22-1 [968 kB]
Get:123 http://172.17.4.1/private trixie-staging/main armhf doxygen armhf 1.9.4-4 [3840 kB]
Get:124 http://172.17.4.1/private trixie-staging/main armhf fontconfig armhf 2.14.2-6 [461 kB]
Get:125 http://172.17.4.1/private trixie-staging/main armhf fonts-lmodern all 2.005-1 [4540 kB]
Get:126 http://172.17.4.1/private trixie-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:127 http://172.17.4.1/private trixie-staging/main armhf icu-devtools armhf 72.1-3 [175 kB]
Get:128 http://172.17.4.1/private trixie-staging/main armhf imagemagick-6.q16 armhf 8:6.9.11.60+dfsg-1.6 [339 kB]
Get:129 http://172.17.4.1/private trixie-staging/main armhf imagemagick armhf 8:6.9.11.60+dfsg-1.6 [122 kB]
Get:130 http://172.17.4.1/private trixie-staging/main armhf tex-common all 6.18 [32.5 kB]
Get:131 http://172.17.4.1/private trixie-staging/main armhf libpaper1 armhf 1.1.29 [11.9 kB]
Get:132 http://172.17.4.1/private trixie-staging/main armhf libpaper-utils armhf 1.1.29 [8416 B]
Get:133 http://172.17.4.1/private trixie-staging/main armhf libkpathsea6 armhf 2023.20230311.66589-6 [144 kB]
Get:134 http://172.17.4.1/private trixie-staging/main armhf libptexenc1 armhf 2023.20230311.66589-6 [42.4 kB]
Get:135 http://172.17.4.1/private trixie-staging/main armhf libsynctex2 armhf 2023.20230311.66589-6 [48.0 kB]
Get:136 http://172.17.4.1/private trixie-staging/main armhf libtexlua53-5 armhf 2023.20230311.66589-6 [82.4 kB]
Get:137 http://172.17.4.1/private trixie-staging/main armhf t1utils armhf 1.41-4 [52.3 kB]
Get:138 http://172.17.4.1/private trixie-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:139 http://172.17.4.1/private trixie-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:140 http://172.17.4.1/private trixie-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:141 http://172.17.4.1/private trixie-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:142 http://172.17.4.1/private trixie-staging/main armhf libcairo2 armhf 1.17.8-3 [418 kB]
Get:143 http://172.17.4.1/private trixie-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:144 http://172.17.4.1/private trixie-staging/main armhf libharfbuzz0b armhf 8.0.1-1 [2098 kB]
Get:145 http://172.17.4.1/private trixie-staging/main armhf libpotrace0 armhf 1.16-2 [23.6 kB]
Get:146 http://172.17.4.1/private trixie-staging/main armhf libteckit0 armhf 2.5.11+ds1-1 [256 kB]
Get:147 http://172.17.4.1/private trixie-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:148 http://172.17.4.1/private trixie-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:149 http://172.17.4.1/private trixie-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:150 http://172.17.4.1/private trixie-staging/main armhf libxt6 armhf 1:1.2.1-1.1 [155 kB]
Get:151 http://172.17.4.1/private trixie-staging/main armhf libxmu6 armhf 2:1.1.3-3 [52.0 kB]
Get:152 http://172.17.4.1/private trixie-staging/main armhf libxpm4 armhf 1:3.5.12-1.1 [42.0 kB]
Get:153 http://172.17.4.1/private trixie-staging/main armhf libxaw7 armhf 2:1.0.14-1 [165 kB]
Get:154 http://172.17.4.1/private trixie-staging/main armhf libxi6 armhf 2:1.8-1 [78.1 kB]
Get:155 http://172.17.4.1/private trixie-staging/main armhf libzzip-0-13 armhf 0.13.72+dfsg.1-1.1 [54.3 kB]
Get:156 http://172.17.4.1/private trixie-staging/main armhf texlive-binaries armhf 2023.20230311.66589-6 [5571 kB]
Get:157 http://172.17.4.1/private trixie-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:158 http://172.17.4.1/private trixie-staging/main armhf texlive-base all 2023.20230613-3 [22.0 MB]
Get:159 http://172.17.4.1/private trixie-staging/main armhf texlive-latex-base all 2023.20230613-3 [1222 kB]
Get:160 http://172.17.4.1/private trixie-staging/main armhf latexmk all 1:4.80-1 [204 kB]
Get:161 http://172.17.4.1/private trixie-staging/main armhf libapache-pom-java all 29-2 [5276 B]
Get:162 http://172.17.4.1/private trixie-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:163 http://172.17.4.1/private trixie-staging/main armhf uuid-dev armhf 2.39.2-1 [38.5 kB]
Get:164 http://172.17.4.1/private trixie-staging/main armhf libblkid-dev armhf 2.39.2-1 [177 kB]
Get:165 http://172.17.4.1/private trixie-staging/main armhf libboost1.74-dev armhf 1.74.0+ds1-22 [9511 kB]
Get:166 http://172.17.4.1/private trixie-staging/main armhf libboost-atomic1.74.0 armhf 1.74.0+ds1-22 [220 kB]
Get:167 http://172.17.4.1/private trixie-staging/main armhf libboost-atomic1.74-dev armhf 1.74.0+ds1-22 [221 kB]
Get:168 http://172.17.4.1/private trixie-staging/main armhf libboost-chrono1.74.0 armhf 1.74.0+ds1-22 [224 kB]
Get:169 http://172.17.4.1/private trixie-staging/main armhf libboost-chrono1.74-dev armhf 1.74.0+ds1-22 [231 kB]
Get:170 http://172.17.4.1/private trixie-staging/main armhf libboost-date-time1.74.0 armhf 1.74.0+ds1-22 [218 kB]
Get:171 http://172.17.4.1/private trixie-staging/main armhf libboost-serialization1.74.0 armhf 1.74.0+ds1-22 [296 kB]
Get:172 http://172.17.4.1/private trixie-staging/main armhf libboost-serialization1.74-dev armhf 1.74.0+ds1-22 [363 kB]
Get:173 http://172.17.4.1/private trixie-staging/main armhf libboost-date-time1.74-dev armhf 1.74.0+ds1-22 [227 kB]
Get:174 http://172.17.4.1/private trixie-staging/main armhf libboost-dev armhf 1.74.0.3+b4 [4824 B]
Get:175 http://172.17.4.1/private trixie-staging/main armhf libboost-regex1.74.0 armhf 1.74.0+ds1-22 [420 kB]
Get:176 http://172.17.4.1/private trixie-staging/main armhf libicu-dev armhf 72.1-3 [9959 kB]
Get:177 http://172.17.4.1/private trixie-staging/main armhf libboost-regex1.74-dev armhf 1.74.0+ds1-22 [526 kB]
Get:178 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams1.74.0 armhf 1.74.0+ds1-22 [235 kB]
Get:179 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams1.74-dev armhf 1.74.0+ds1-22 [245 kB]
Get:180 http://172.17.4.1/private trixie-staging/main armhf libboost-iostreams-dev armhf 1.74.0.3+b4 [4592 B]
Get:181 http://172.17.4.1/private trixie-staging/main armhf libboost-python1.74.0 armhf 1.74.0+ds1-22 [276 kB]
Get:182 http://172.17.4.1/private trixie-staging/main armhf libpython3.11 armhf 3.11.5-3 [1660 kB]
Get:183 http://172.17.4.1/private trixie-staging/main armhf libexpat1-dev armhf 2.5.0-2 [130 kB]
Get:184 http://172.17.4.1/private trixie-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-3 [901 kB]
Get:185 http://172.17.4.1/private trixie-staging/main armhf libpython3.11-dev armhf 3.11.5-3 [3370 kB]
Get:186 http://172.17.4.1/private trixie-staging/main armhf libpython3-dev armhf 3.11.4-5 [9432 B]
Get:187 http://172.17.4.1/private trixie-staging/main armhf python3.11-dev armhf 3.11.5-3 [623 kB]
Get:188 http://172.17.4.1/private trixie-staging/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get:189 http://172.17.4.1/private trixie-staging/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get:190 http://172.17.4.1/private trixie-staging/main armhf libjs-sphinxdoc all 5.3.0-7 [131 kB]
Get:191 http://172.17.4.1/private trixie-staging/main armhf python3-dev armhf 3.11.4-5 [26.2 kB]
Get:192 http://172.17.4.1/private trixie-staging/main armhf libboost-python1.74-dev armhf 1.74.0+ds1-22 [297 kB]
Get:193 http://172.17.4.1/private trixie-staging/main armhf libboost-python-dev armhf 1.74.0.3+b4 [4904 B]
Get:194 http://172.17.4.1/private trixie-staging/main armhf libboost-regex-dev armhf 1.74.0.3+b4 [4876 B]
Get:195 http://172.17.4.1/private trixie-staging/main armhf libboost-system1.74.0 armhf 1.74.0+ds1-22 [218 kB]
Ign:195 http://172.17.4.1/private trixie-staging/main armhf libboost-system1.74.0 armhf 1.74.0+ds1-22
Get:196 http://172.17.4.1/private trixie-staging/main armhf libboost-system1.74-dev armhf 1.74.0+ds1-22 [219 kB]
Get:197 http://172.17.4.1/private trixie-staging/main armhf libboost-system-dev armhf 1.74.0.3+b4 [4744 B]
Get:198 http://172.17.4.1/private trixie-staging/main armhf libboost-thread1.74.0 armhf 1.74.0+ds1-22 [247 kB]
Get:199 http://172.17.4.1/private trixie-staging/main armhf libboost-thread1.74-dev armhf 1.74.0+ds1-22 [260 kB]
Get:200 http://172.17.4.1/private trixie-staging/main armhf libboost-thread-dev armhf 1.74.0.3+b4 [4632 B]
Get:201 http://172.17.4.1/private trixie-staging/main armhf libbrotli-dev armhf 1.0.9-2+b3 [270 kB]
Get:202 http://172.17.4.1/private trixie-staging/main armhf libbz2-dev armhf 1.0.8-5+b2 [26.8 kB]
Get:203 http://172.17.4.1/private trixie-staging/main armhf libcairo-gobject2 armhf 1.17.8-3 [127 kB]
Get:204 http://172.17.4.1/private trixie-staging/main armhf liblzo2-2 armhf 2.10-2 [50.2 kB]
Get:205 http://172.17.4.1/private trixie-staging/main armhf libcairo-script-interpreter2 armhf 1.17.8-3 [48.5 kB]
Get:206 http://172.17.4.1/private trixie-staging/main armhf libpng-dev armhf 1.6.40-1 [336 kB]
Get:207 http://172.17.4.1/private trixie-staging/main armhf libfreetype-dev armhf 2.13.2+dfsg-1 [531 kB]
Get:208 http://172.17.4.1/private trixie-staging/main armhf libpkgconf3 armhf 1.8.1-1 [31.3 kB]
Get:209 http://172.17.4.1/private trixie-staging/main armhf pkgconf-bin armhf 1.8.1-1 [27.8 kB]
Get:210 http://172.17.4.1/private trixie-staging/main armhf pkgconf armhf 1.8.1-1 [25.9 kB]
Get:211 http://172.17.4.1/private trixie-staging/main armhf pkg-config armhf 1.8.1-1 [13.7 kB]
Get:212 http://172.17.4.1/private trixie-staging/main armhf libfontconfig-dev armhf 2.14.2-6 [385 kB]
Get:213 http://172.17.4.1/private trixie-staging/main armhf libffi-dev armhf 3.4.4-1 [60.4 kB]
Get:214 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-data all 2.78.0-2+rpi1 [1230 kB]
Get:215 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-bin armhf 2.78.0-2+rpi1 [106 kB]
Get:216 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-dev-bin armhf 2.78.0-2+rpi1 [153 kB]
Get:217 http://172.17.4.1/private trixie-staging/main armhf libsepol-dev armhf 3.5-1 [309 kB]
Get:218 http://172.17.4.1/private trixie-staging/main armhf libpcre2-16-0 armhf 10.42-4 [211 kB]
Get:219 http://172.17.4.1/private trixie-staging/main armhf libpcre2-32-0 armhf 10.42-4 [201 kB]
Get:220 http://172.17.4.1/private trixie-staging/main armhf libpcre2-posix3 armhf 10.42-4 [55.1 kB]
Get:221 http://172.17.4.1/private trixie-staging/main armhf libpcre2-dev armhf 10.42-4 [648 kB]
Get:222 http://172.17.4.1/private trixie-staging/main armhf libselinux1-dev armhf 3.5-1 [143 kB]
Get:223 http://172.17.4.1/private trixie-staging/main armhf libmount-dev armhf 2.39.2-1 [23.0 kB]
Get:224 http://172.17.4.1/private trixie-staging/main armhf libglib2.0-dev armhf 2.78.0-2+rpi1 [1508 kB]
Get:225 http://172.17.4.1/private trixie-staging/main armhf libpixman-1-dev armhf 0.42.2-1 [480 kB]
Get:226 http://172.17.4.1/private trixie-staging/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get:227 http://172.17.4.1/private trixie-staging/main armhf x11proto-dev all 2023.2-1 [598 kB]
Get:228 http://172.17.4.1/private trixie-staging/main armhf x11proto-core-dev all 2023.2-1 [3288 B]
Get:229 http://172.17.4.1/private trixie-staging/main armhf libice-dev armhf 2:1.0.10-1 [58.7 kB]
Get:230 http://172.17.4.1/private trixie-staging/main armhf libsm-dev armhf 2:1.2.3-1 [35.4 kB]
Get:231 http://172.17.4.1/private trixie-staging/main armhf libxau-dev armhf 1:1.0.9-1 [22.3 kB]
Get:232 http://172.17.4.1/private trixie-staging/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.9 kB]
Get:233 http://172.17.4.1/private trixie-staging/main armhf xtrans-dev all 1.4.0-1 [98.7 kB]
Get:234 http://172.17.4.1/private trixie-staging/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get:235 http://172.17.4.1/private trixie-staging/main armhf libxcb1-dev armhf 1.15-1 [175 kB]
Get:236 http://172.17.4.1/private trixie-staging/main armhf libx11-dev armhf 2:1.8.6-1 [801 kB]
Get:237 http://172.17.4.1/private trixie-staging/main armhf libxcb-render0-dev armhf 1.15-1 [117 kB]
Get:238 http://172.17.4.1/private trixie-staging/main armhf libxcb-shm0-dev armhf 1.15-1 [107 kB]
Get:239 http://172.17.4.1/private trixie-staging/main armhf libxext-dev armhf 2:1.3.4-1 [102 kB]
Get:240 http://172.17.4.1/private trixie-staging/main armhf libxrender-dev armhf 1:0.9.10-1.1 [37.6 kB]
Get:241 http://172.17.4.1/private trixie-staging/main armhf libcairo2-dev armhf 1.17.8-3 [42.0 kB]
Get:242 http://172.17.4.1/private trixie-staging/main armhf libcommons-parent-java all 56-1 [10.8 kB]
Get:243 http://172.17.4.1/private trixie-staging/main armhf libcommons-logging-java all 1.2-3 [62.4 kB]
Get:244 http://172.17.4.1/private trixie-staging/main armhf libcoordgen3 armhf 3.0.2-1 [171 kB]
Get:245 http://172.17.4.1/private trixie-staging/main armhf libcoordgen-dev armhf 3.0.2-1 [46.5 kB]
Get:246 http://172.17.4.1/private trixie-staging/main armhf libnspr4 armhf 2:4.35-1.1 [85.2 kB]
Get:247 http://172.17.4.1/private trixie-staging/main armhf libnss3 armhf 2:3.92-1 [1105 kB]
Get:248 http://172.17.4.1/private trixie-staging/main armhf nss-plugin-pem armhf 1.1.0-1 [40.2 kB]
Get:249 http://172.17.4.1/private trixie-staging/main armhf libcurl3-nss armhf 7.88.1-10+rpi1 [346 kB]
Get:250 http://172.17.4.1/private trixie-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:251 http://172.17.4.1/private trixie-staging/main armhf libeigen3-dev all 3.4.0-4 [1041 kB]
Get:252 http://172.17.4.1/private trixie-staging/main armhf libfontbox-java all 1:1.8.16-4 [211 kB]
Get:253 http://172.17.4.1/private trixie-staging/main armhf libfontenc1 armhf 1:1.1.4-1 [22.3 kB]
Get:254 http://172.17.4.1/private trixie-staging/main armhf libfribidi0 armhf 1.0.13-3 [69.9 kB]
Get:255 http://172.17.4.1/private trixie-staging/main armhf libgdk-pixbuf2.0-common all 2.42.10+dfsg-1 [306 kB]
Get:256 http://172.17.4.1/private trixie-staging/main armhf shared-mime-info armhf 2.2-1 [726 kB]
Get:257 http://172.17.4.1/private trixie-staging/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.10+dfsg-1+b1 [123 kB]
Get:258 http://172.17.4.1/private trixie-staging/main armhf libgfortran5 armhf 12.2.0-14+rpi1 [238 kB]
Get:259 http://172.17.4.1/private trixie-staging/main armhf libimagequant0 armhf 2.17.0-1 [28.0 kB]
Get:260 http://172.17.4.1/private trixie-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:261 http://172.17.4.1/private trixie-staging/main armhf liblua5.3-0 armhf 5.3.6-2 [98.3 kB]
Get:262 http://172.17.4.1/private trixie-staging/main armhf libmaeparser1 armhf 1.3.1-1 [75.9 kB]
Get:263 http://172.17.4.1/private trixie-staging/main armhf libmaeparser-dev armhf 1.3.1-1 [13.3 kB]
Get:264 http://172.17.4.1/private trixie-staging/main armhf libncurses6 armhf 6.4+20230625-2 [79.6 kB]
Get:265 http://172.17.4.1/private trixie-staging/main armhf libncurses-dev armhf 6.4+20230625-2 [290 kB]
Get:266 http://172.17.4.1/private trixie-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:267 http://172.17.4.1/private trixie-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:268 http://172.17.4.1/private trixie-staging/main armhf libpango-1.0-0 armhf 1.51.0+ds-2 [187 kB]
Get:269 http://172.17.4.1/private trixie-staging/main armhf libpangoft2-1.0-0 armhf 1.51.0+ds-2 [40.4 kB]
Get:270 http://172.17.4.1/private trixie-staging/main armhf libpangocairo-1.0-0 armhf 1.51.0+ds-2 [30.0 kB]
Get:271 http://172.17.4.1/private trixie-staging/main armhf libpdfbox-java all 1:1.8.16-4 [5527 kB]
Get:272 http://172.17.4.1/private trixie-staging/main armhf libpfm4 armhf 4.13.0+git15-gefd10fb-2 [45.7 kB]
Get:273 http://172.17.4.1/private trixie-staging/main armhf libpq5 armhf 16.0-2 [193 kB]
Get:274 http://172.17.4.1/private trixie-staging/main armhf libssl-dev armhf 3.0.11-1 [2105 kB]
Get:275 http://172.17.4.1/private trixie-staging/main armhf libpq-dev armhf 16.0-2 [128 kB]
Get:276 http://172.17.4.1/private trixie-staging/main armhf libraqm0 armhf 0.10.1-1 [11.7 kB]
Get:277 http://172.17.4.1/private trixie-staging/main armhf librsvg2-2 armhf 2.54.7+dfsg-2 [2201 kB]
Get:278 http://172.17.4.1/private trixie-staging/main armhf librsvg2-bin armhf 2.54.7+dfsg-2 [1399 kB]
Get:279 http://172.17.4.1/private trixie-staging/main armhf libsqlite3-dev armhf 3.43.1-1 [925 kB]
Get:280 http://172.17.4.1/private trixie-staging/main armhf libxml2-dev armhf 2.9.14+dfsg-1.3 [636 kB]
Get:281 http://172.17.4.1/private trixie-staging/main armhf libyaml-0-2 armhf 0.2.5-1 [44.6 kB]
Get:282 http://172.17.4.1/private trixie-staging/main armhf libz3-dev armhf 4.8.12-3.1 [90.6 kB]
Get:283 http://172.17.4.1/private trixie-staging/main armhf llvm-15-runtime armhf 1:15.0.6-4+rpi1+b1 [441 kB]
Get:284 http://172.17.4.1/private trixie-staging/main armhf llvm-15 armhf 1:15.0.6-4+rpi1+b1 [10.3 MB]
Get:285 http://172.17.4.1/private trixie-staging/main armhf python3-pkg-resources all 68.1.2-1 [241 kB]
Get:286 http://172.17.4.1/private trixie-staging/main armhf python3-pygments all 2.15.1+dfsg-1 [817 kB]
Get:287 http://172.17.4.1/private trixie-staging/main armhf python3-yaml armhf 6.0.1-1 [108 kB]
Get:288 http://172.17.4.1/private trixie-staging/main armhf llvm-15-tools armhf 1:15.0.6-4+rpi1+b1 [387 kB]
Get:289 http://172.17.4.1/private trixie-staging/main armhf llvm-15-dev armhf 1:15.0.6-4+rpi1+b1 [35.7 MB]
Get:290 http://172.17.4.1/private trixie-staging/main armhf pandoc-data all 2.17.1.1-3 [418 kB]
Get:291 http://172.17.4.1/private trixie-staging/main armhf pandoc armhf 2.17.1.1-3 [25.9 MB]
Get:292 http://172.17.4.1/private trixie-staging/main armhf postgresql-client-16 armhf 16.0-2 [1747 kB]
Get:293 http://172.17.4.1/private trixie-staging/main armhf postgresql-server-dev-16 armhf 16.0-2 [1160 kB]
Get:294 http://172.17.4.1/private trixie-staging/main armhf postgresql-server-dev-all armhf 255 [21.4 kB]
Get:295 http://172.17.4.1/private trixie-staging/main armhf preview-latex-style all 12.2-1 [201 kB]
Get:296 http://172.17.4.1/private trixie-staging/main armhf python-babel-localedata all 2.10.3-1 [5615 kB]
Get:297 http://172.17.4.1/private trixie-staging/main armhf python3-alabaster all 0.7.12-1 [20.8 kB]
Get:298 http://172.17.4.1/private trixie-staging/main armhf python3-tz all 2023.3.post1-1 [30.8 kB]
Get:299 http://172.17.4.1/private trixie-staging/main armhf python3-babel all 2.10.3-1 [103 kB]
Get:300 http://172.17.4.1/private trixie-staging/main armhf python3-certifi all 2023.7.22-1 [150 kB]
Get:301 http://172.17.4.1/private trixie-staging/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB]
Get:302 http://172.17.4.1/private trixie-staging/main armhf python3-charset-normalizer all 3.2.0-1 [50.7 kB]
Get:303 http://172.17.4.1/private trixie-staging/main armhf python3-commonmark all 0.9.1-4 [45.1 kB]
Get:304 http://172.17.4.1/private trixie-staging/main armhf python3-six all 1.16.0-4 [17.5 kB]
Get:305 http://172.17.4.1/private trixie-staging/main armhf python3-dateutil all 2.8.2-3 [78.4 kB]
Get:306 http://172.17.4.1/private trixie-staging/main armhf python3-roman all 3.3-3 [9880 B]
Get:307 http://172.17.4.1/private trixie-staging/main armhf python3-docutils all 0.19+dfsg-7 [382 kB]
Get:308 http://172.17.4.1/private trixie-staging/main armhf python3-greenlet armhf 2.0.2-1 [138 kB]
Get:309 http://172.17.4.1/private trixie-staging/main armhf python3-idna all 3.3-2 [39.1 kB]
Get:310 http://172.17.4.1/private trixie-staging/main armhf python3-imagesize all 1.4.1-1 [6688 B]
Get:311 http://172.17.4.1/private trixie-staging/main armhf python3-markupsafe armhf 2.1.3-1 [12.8 kB]
Get:312 http://172.17.4.1/private trixie-staging/main armhf python3-jinja2 all 3.1.2-1 [119 kB]
Get:313 http://172.17.4.1/private trixie-staging/main armhf python3-mdurl all 0.1.2-1 [9444 B]
Get:314 http://172.17.4.1/private trixie-staging/main armhf python3-markdown-it all 3.0.0-2 [62.5 kB]
Get:315 http://172.17.4.1/private trixie-staging/main armhf python3-mdit-py-plugins all 0.4.0-1 [33.0 kB]
Get:316 http://172.17.4.1/private trixie-staging/main armhf sphinx-common all 5.3.0-7 [652 kB]
Get:317 http://172.17.4.1/private trixie-staging/main armhf python3-packaging all 23.1-1 [37.4 kB]
Get:318 http://172.17.4.1/private trixie-staging/main armhf python3-urllib3 all 1.26.16-1 [115 kB]
Get:319 http://172.17.4.1/private trixie-staging/main armhf python3-requests all 2.31.0+dfsg-1 [68.6 kB]
Get:320 http://172.17.4.1/private trixie-staging/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get:321 http://172.17.4.1/private trixie-staging/main armhf python3-sphinx all 5.3.0-7 [550 kB]
Get:322 http://172.17.4.1/private trixie-staging/main armhf python3-myst-parser all 2.0.0-1 [73.7 kB]
Get:323 http://172.17.4.1/private trixie-staging/main armhf python3-numpy armhf 1:1.24.2-1 [3826 kB]
Get:324 http://172.17.4.1/private trixie-staging/main armhf python3-pandas-lib armhf 1.5.3+dfsg-6 [3000 kB]
Get:325 http://172.17.4.1/private trixie-staging/main armhf python3-pandas all 1.5.3+dfsg-6 [2886 kB]
Get:326 http://172.17.4.1/private trixie-staging/main armhf python3-pil armhf 10.0.0-1 [437 kB]
Get:327 http://172.17.4.1/private trixie-staging/main armhf python3-recommonmark all 0.7.1+ds-5 [17.3 kB]
Get:328 http://172.17.4.1/private trixie-staging/main armhf python3-sqlalchemy all 1.4.46+ds1-1+rpi1 [1008 kB]
Get:329 http://172.17.4.1/private trixie-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-7.1 [97.7 kB]
Get:330 http://172.17.4.1/private trixie-staging/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get:331 http://172.17.4.1/private trixie-staging/main armhf xfonts-utils armhf 1:7.7+6 [82.5 kB]
Get:332 http://172.17.4.1/private trixie-staging/main armhf tex-gyre all 20180621-6 [6209 kB]
Get:333 http://172.17.4.1/private trixie-staging/main armhf texlive-fonts-recommended all 2023.20230613-3 [4989 kB]
Get:334 http://172.17.4.1/private trixie-staging/main armhf texlive-latex-recommended all 2023.20230613-3 [8843 kB]
Get:335 http://172.17.4.1/private trixie-staging/main armhf texlive-pictures all 2023.20230613-3 [15.9 MB]
Get:336 http://172.17.4.1/private trixie-staging/main armhf texlive-latex-extra all 2023.20230613-2 [19.5 MB]
Get:195 http://172.17.4.1/private trixie-staging/main armhf libboost-system1.74.0 armhf 1.74.0+ds1-22 [218 kB]
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Setting up imagemagick-6-common (8:6.9.11.60+dfsg-1.6) ...
Setting up libpsl5:armhf (0.21.2-1+b1) ...
Setting up libboost1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up libpixman-1-dev:armhf (0.42.2-1) ...
Setting up libicu72:armhf (72.1-3) ...
Setting up libboost-atomic1.74.0:armhf (1.74.0+ds1-22) ...
Setting up liblerc4:armhf (4.0.0+ds-3) ...
Setting up bsdextrautils (2.39.2-1) ...
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libdatrie1:armhf (0.2.13-2+b2) ...
Setting up libmagic-mgc (1:5.45-2) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libyaml-0-2:armhf (0.2.5-1) ...
Setting up libglib2.0-0:armhf (2.78.0-2+rpi1) ...
No schema files found: doing nothing.
Setting up libboost-iostreams1.74.0:armhf (1.74.0+ds1-22) ...
Setting up libpython3.11-stdlib:armhf (3.11.5-3) ...
Setting up libdebhelper-perl (13.11.6) ...
Setting up libbrotli1:armhf (1.0.9-2+b3) ...
Setting up libfontbox-java (1:1.8.16-4) ...
Setting up libboost-chrono1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up libgdk-pixbuf2.0-common (2.42.10+dfsg-1) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libnghttp2-14:armhf (1.56.0-1) ...
Setting up libmagic1:armhf (1:5.45-2) ...
Setting up libpq5:armhf (16.0-2) ...
Setting up libdeflate0:armhf (1.18-1) ...
Setting up gettext-base (0.21-13) ...
Setting up m4 (1.4.19-4) ...
Setting up liblzo2-2:armhf (2.10-2) ...
Setting up libzzip-0-13:armhf (0.13.72+dfsg.1-1.1) ...
Setting up file (1:5.45-2) ...
Setting up libffi-dev:armhf (3.4.4-1) ...
Setting up libpthread-stubs0-dev:armhf (0.4-1) ...
Setting up libjbig0:armhf (2.1-6.1) ...
Setting up libpcre2-16-0:armhf (10.42-4) ...
Setting up python-babel-localedata (2.10.3-1) ...
Setting up rapidjson-dev (1.1.0+dfsg2-7.1) ...
Setting up libmaeparser1:armhf (1.3.1-1) ...
Setting up xtrans-dev (1.4.0-1) ...
Setting up libfontenc1:armhf (1:1.1.4-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:armhf (4.8.12-3.1) ...
Setting up libpcre2-32-0:armhf (10.42-4) ...
Setting up libblas3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libglib2.0-data (2.78.0-2+rpi1) ...
Setting up libpkgconf3:armhf (1.8.1-1) ...
Setting up libuv1:armhf (1.44.2-1+rpi1) ...
Setting up libpfm4:armhf (4.13.0+git15-gefd10fb-2) ...
Setting up libexpat1-dev:armhf (2.5.0-2) ...
Setting up libjpeg62-turbo:armhf (1:2.1.5-2) ...
Setting up libsqlite3-dev:armhf (3.43.1-1) ...
Setting up libx11-data (2:1.8.6-1) ...
Setting up libnspr4:armhf (2:4.35-1.1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libteckit0:armhf (2.5.11+ds1-1) ...
Setting up uuid-dev:armhf (2.39.2-1) ...
Setting up libapache-pom-java (29-2) ...
Setting up libboost-system1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up libncurses6:armhf (6.4+20230625-2) ...
Setting up xfonts-encodings (1:1.0.4-2.2) ...
Setting up libfribidi0:armhf (1.0.13-3) ...
Setting up libboost-regex1.74.0:armhf (1.74.0+ds1-22) ...
Setting up t1utils (1.41-4) ...
Setting up libtexlua53-5:armhf (2023.20230311.66589-6) ...
Setting up libimagequant0:armhf (2.17.0-1) ...
Setting up libproc2-0:armhf (2:4.0.3-1) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libssl-dev:armhf (3.0.11-1) ...
Setting up libpng16-16:armhf (1.6.40-1) ...
Setting up autopoint (0.21-13) ...
Setting up libjsoncpp25:armhf (1.9.5-6) ...
Setting up icu-devtools (72.1-3) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up libsepol-dev:armhf (3.5-1) ...
Setting up ucf (3.0043+nmu1) ...
Setting up pkgconf-bin (1.8.1-1) ...
Setting up libgc1:armhf (1:8.2.4-1) ...
Setting up libdav1d6:armhf (1.2.1-2+rpi1) ...
Setting up libltdl7:armhf (2.4.7-7) ...
Setting up libfftw3-double3:armhf (3.3.10-1) ...
Setting up libkpathsea6:armhf (2023.20230311.66589-6) ...
Setting up libgfortran5:armhf (12.2.0-14+rpi1) ...
Setting up autoconf (2.71-3) ...
Setting up libwebp7:armhf (1.3.2-0.3) ...
Setting up libboost-atomic1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up libboost-serialization1.74.0:armhf (1.74.0+ds1-22) ...
Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-3) ...
Setting up libpcre2-posix3:armhf (10.42-4) ...
Setting up liblqr-1-0:armhf (0.4.2-2.1) ...
Setting up librhash0:armhf (1.4.3-3) ...
Setting up libtiff6:armhf (4.5.1+git230720-1) ...
Setting up xml-core (0.18+nmu1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up liblua5.3-0:armhf (5.3.6-2) ...
Setting up procps (2:4.0.3-1) ...
Setting up libjson-perl (4.10000-1) ...
Setting up bison (2:3.8.2+dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up fonts-lmodern (2.005-1) ...
Setting up libopenjp2-7:armhf (2.5.0-2) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libthai-data (0.1.29-1) ...
Setting up libssh2-1:armhf (1.11.0-2) ...
Setting up xorg-sgml-doctools (1:1.11-1.1) ...
Setting up cmake-data (3.27.6-1) ...
Setting up libboost-dev:armhf (1.74.0.3+b4) ...
Setting up pandoc-data (2.17.1.1-3) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libboost-date-time1.74.0:armhf (1.74.0+ds1-22) ...
Setting up libcoordgen3:armhf (3.0.2-1) ...
Setting up libboost-python1.74.0 (1.74.0+ds1-22) ...
Setting up libde265-0:armhf (1.0.11-1+rpi1+b1) ...
Setting up openssl (3.0.11-1) ...
Setting up libwebpmux3:armhf (1.3.2-0.3) ...
Setting up libbsd0:armhf (0.11.7-4) ...
Setting up mailcap (3.70+nmu1) ...
Setting up libelf1:armhf (0.188-2.1+rpi1) ...
Setting up libicu-dev:armhf (72.1-3) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.3) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up libbrotli-dev:armhf (1.0.9-2+b3) ...
Setting up libsynctex2:armhf (2023.20230311.66589-6) ...
Setting up libpython3-stdlib:armhf (3.11.4-5) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up libboost-thread1.74.0:armhf (1.74.0+ds1-22) ...
Setting up libbz2-dev:armhf (1.0.8-5+b2) ...
Setting up libpotrace0:armhf (1.16-2) ...
Setting up libmaeparser-dev:armhf (1.3.1-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up libblkid-dev:armhf (2.39.2-1) ...
Setting up libpaper1:armhf (1.1.29) ...

Creating config file /etc/papersize with new version
Setting up libz3-dev:armhf (4.8.12-3.1) ...
Setting up python3.11 (3.11.5-3) ...
Setting up libice6:armhf (2:1.0.10-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up flex (2.6.4-8.2) ...
Setting up liblapack3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.4+20230625-2) ...
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-13) ...
Setting up libpdfbox-java (1:1.8.16-4) ...
Setting up mime-support (3.66) ...
Setting up libpython3.11:armhf (3.11.5-3) ...
Setting up libpcre2-dev:armhf (10.42-4) ...
Setting up libtool (2.4.7-7) ...
Setting up libarchive13:armhf (3.6.2-1) ...
Setting up libxcb-render0:armhf (1.15-1) ...
Setting up libselinux1-dev:armhf (3.5-1) ...
Setting up fontconfig-config (2.14.2-6) ...
Setting up libwebpdemux2:armhf (1.3.2-0.3) ...
Setting up postgresql-client-16 (16.0-2) ...
update-alternatives: using /usr/share/postgresql/16/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode
Setting up libedit2:armhf (3.1-20230828-1) ...
Setting up libboost-system-dev:armhf (1.74.0.3+b4) ...
Setting up libpng-dev:armhf (1.6.40-1) ...
Setting up libcommons-parent-java (56-1) ...
Setting up libcommons-logging-java (1.2-3) ...
Setting up libglib2.0-bin (2.78.0-2+rpi1) ...
Setting up libpq-dev (16.0-2) ...
Setting up libobjc4:armhf (12.2.0-14+rpi1) ...
Setting up python3 (3.11.4-5) ...
Setting up libnss3:armhf (2:3.92-1) ...
Setting up libxcb-shm0:armhf (1.15-1) ...
Setting up libpaper-utils (1.1.29) ...
Setting up python3-markupsafe (2.1.3-1) ...
Setting up python3-tz (2023.3.post1-1) ...
Setting up pkgconf:armhf (1.8.1-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up python3-six (1.16.0-4) ...
Setting up dh-autoreconf (20) ...
Setting up tex-common (6.18) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libthai0:armhf (0.1.29-1) ...
Setting up ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
140 added, 0 removed; done.
Setting up python3-roman (3.3-3) ...
Setting up python3-jinja2 (3.1.2-1) ...
Setting up libxml2-dev:armhf (2.9.14+dfsg-1.3) ...
Setting up python3-packaging (23.1-1) ...
Setting up libptexenc1:armhf (2023.20230311.66589-6) ...
Setting up pandoc (2.17.1.1-3) ...
Setting up libfreetype6:armhf (2.13.2+dfsg-1) ...
Setting up python3-certifi (2023.7.22-1) ...
Setting up ssl-cert (1.1.2) ...
Setting up python3-snowballstemmer (2.2.0-4) ...
Setting up libpython3.11-dev:armhf (3.11.5-3) ...
Setting up python3-mdurl (0.1.2-1) ...
Setting up python3-greenlet (2.0.2-1) ...
Setting up shared-mime-info (2.2-1) ...
Setting up postgresql-common (255) ...
supported-versions: WARNING! Unknown distribution ID in /etc/os-release: raspbian
debian found in ID_LIKE, treating as Debian

Creating config file /etc/postgresql-common/createcluster.conf with new version
Building PostgreSQL dictionaries from installed myspell/hunspell packages...
Removing obsolete dictionary files:
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libeigen3-dev (3.4.0-4) ...
Setting up python3-idna (3.3-2) ...
Setting up pkg-config:armhf (1.8.1-1) ...
Setting up libjs-sphinxdoc (5.3.0-7) ...
Setting up python3-urllib3 (1.26.16-1) ...
Setting up libboost-serialization1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up python3-markdown-it (3.0.0-2) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up libllvm14:armhf (1:14.0.6-16+rpi1) ...
Setting up libobjc-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up dwz (0.15-1) ...
Setting up libboost-regex1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up groff-base (1.23.0-2) ...
Setting up libllvm15:armhf (1:15.0.6-4+rpi1+b1) ...
Setting up libcurl4:armhf (7.88.1-10+rpi1) ...
Setting up libx11-6:armhf (2:1.8.6-1) ...
Setting up libharfbuzz0b:armhf (8.0.1-1) ...
Setting up python3-dateutil (2.8.2-3) ...
Setting up libgdk-pixbuf-2.0-0:armhf (2.42.10+dfsg-1+b1) ...
Setting up libcoordgen-dev:armhf (3.0.2-1) ...
Setting up libboost-regex-dev:armhf (1.74.0.3+b4) ...
Setting up python3-lib2to3 (3.11.5-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libmount-dev:armhf (2.39.2-1) ...
Setting up python3-imagesize (1.4.1-1) ...
Setting up python3-commonmark (0.9.1-4) ...
Setting up python3-pkg-resources (68.1.2-1) ...
Setting up python3-distutils (3.11.5-1) ...
Setting up dh-python (6.20230825) ...
Setting up libglib2.0-dev-bin (2.78.0-2+rpi1) ...
Setting up libpython3-dev:armhf (3.11.4-5) ...
Setting up libxpm4:armhf (1:3.5.12-1.1) ...
Setting up libclang-common-15-dev (1:15.0.6-4+rpi1+b1) ...
Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up python3-babel (2.10.3-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up llvm-15-linker-tools (1:15.0.6-4+rpi1+b1) ...
Setting up python3.11-dev (3.11.5-3) ...
Setting up python3-charset-normalizer (3.2.0-1) ...
Setting up python3-alabaster (0.7.12-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up preview-latex-style (12.2-1) ...
Setting up python3-mdit-py-plugins (0.4.0-1) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up nss-plugin-pem:armhf (1.1.0-1) ...
Setting up libclang1-14 (1:14.0.6-16+rpi1) ...
Setting up python3-yaml (6.0.1-1) ...
Setting up libclang1-15 (1:15.0.6-4+rpi1+b1) ...
Setting up xfonts-utils (1:7.7+6) ...
Setting up man-db (2.11.2-3) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-sqlalchemy (1.4.46+ds1-1+rpi1) ...
Setting up libfreetype-dev:armhf (2.13.2+dfsg-1) ...
Setting up libboost-iostreams1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up libboost-date-time1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up python3-pygments (2.15.1+dfsg-1) ...
Setting up python3-chardet (5.2.0+dfsg-1) ...
Setting up libglib2.0-dev:armhf (2.78.0-2+rpi1) ...
Setting up libraqm0:armhf (0.10.1-1) ...
Setting up sphinx-common (5.3.0-7) ...
Setting up python3-dev (3.11.4-5) ...
Setting up python3-requests (2.31.0+dfsg-1) ...
Setting up libclang-cpp14 (1:14.0.6-16+rpi1) ...
Setting up libxt6:armhf (1:1.2.1-1.1) ...
Setting up python3-numpy (1:1.24.2-1) ...
Setting up libclang-cpp15 (1:15.0.6-4+rpi1+b1) ...
Setting up llvm-15-runtime (1:15.0.6-4+rpi1+b1) ...
Setting up libcurl3-nss:armhf (7.88.1-10+rpi1) ...
Setting up cmake (3.27.6-1) ...
Setting up libboost-thread1.74-dev:armhf (1.74.0+ds1-22) ...
Setting up tex-gyre (20180621-6) ...
Setting up libboost-thread-dev:armhf (1.74.0.3+b4) ...
Setting up llvm-15 (1:15.0.6-4+rpi1+b1) ...
Setting up libxmu6:armhf (2:1.1.3-3) ...
Setting up libxi6:armhf (2:1.8-1) ...
Setting up clang-15 (1:15.0.6-4+rpi1+b1) ...
Setting up python3-pandas-lib:armhf (1.5.3+dfsg-6) ...
Setting up debhelper (13.11.6) ...
Setting up libxaw7:armhf (2:1.0.14-1) ...
Setting up libboost-iostreams-dev:armhf (1.74.0.3+b4) ...
Setting up libboost-python1.74-dev (1.74.0+ds1-22) ...
Setting up libboost-python-dev (1.74.0.3+b4) ...
Setting up llvm-15-tools (1:15.0.6-4+rpi1+b1) ...
Setting up python3-pil:armhf (10.0.0-1) ...
Setting up doxygen (1.9.4-4) ...
Setting up python3-pandas (1.5.3+dfsg-6) ...
Setting up llvm-15-dev (1:15.0.6-4+rpi1+b1) ...
Setting up postgresql-server-dev-16 (16.0-2) ...
Setting up postgresql-server-dev-all:armhf (255) ...
Setting up libheif-plugin-dav1d:armhf (1.16.2-2) ...
Setting up libheif-plugin-libde265:armhf (1.16.2-2) ...
Setting up libheif1:armhf (1.16.2-2) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.14.2-6) ...
Setting up x11proto-dev (2023.2-1) ...
Setting up fontconfig (2.14.2-6) ...
Regenerating fonts cache... done.
Setting up libxau-dev:armhf (1:1.0.9-1) ...
Setting up libice-dev:armhf (2:1.0.10-1) ...
Setting up libfontconfig-dev:armhf (2.14.2-6) ...
Setting up libsm-dev:armhf (2:1.2.3-1) ...
Processing triggers for libc-bin (2.36-9+rpi1+deb12u1) ...
Setting up libpango-1.0-0:armhf (1.51.0+ds-2) ...
Setting up libcairo2:armhf (1.17.8-3) ...
Setting up libxdmcp-dev:armhf (1:1.1.2-3) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.11.60+dfsg-1.6) ...
Setting up x11proto-core-dev (2023.2-1) ...
Setting up texlive-binaries (2023.20230311.66589-6) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up docutils-common (0.19+dfsg-7) ...
Setting up libmagickwand-6.q16-6:armhf (8:6.9.11.60+dfsg-1.6) ...
Setting up libcairo-gobject2:armhf (1.17.8-3) ...
Setting up libpangoft2-1.0-0:armhf (1.51.0+ds-2) ...
Setting up texlive-base (2023.20230613-3) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up libpangocairo-1.0-0:armhf (1.51.0+ds-2) ...
Setting up libcairo-script-interpreter2:armhf (1.17.8-3) ...
Setting up libxcb1-dev:armhf (1.15-1) ...
Setting up libx11-dev:armhf (2:1.8.6-1) ...
Setting up librsvg2-2:armhf (2.54.7+dfsg-2) ...
Setting up libxcb-shm0-dev:armhf (1.15-1) ...
Setting up texlive-latex-base (2023.20230613-3) ...
Setting up texlive-latex-recommended (2023.20230613-3) ...
Setting up libxcb-render0-dev:armhf (1.15-1) ...
Setting up texlive-pictures (2023.20230613-3) ...
Setting up libxext-dev:armhf (2:1.3.4-1) ...
Setting up imagemagick-6.q16 (8:6.9.11.60+dfsg-1.6) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up texlive-fonts-recommended (2023.20230613-3) ...
Setting up libxrender-dev:armhf (1:0.9.10-1.1) ...
Setting up librsvg2-bin (2.54.7+dfsg-2) ...
Setting up latexmk (1:4.80-1) ...
Setting up texlive-latex-extra (2023.20230613-2) ...
Setting up imagemagick (8:6.9.11.60+dfsg-1.6) ...
Setting up libcairo2-dev:armhf (1.17.8-3) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.19+dfsg-7) ...
Setting up python3-sphinx (5.3.0-7) ...
Setting up python3-myst-parser (2.0.0-1) ...
Setting up python3-recommonmark (0.7.1+ds-5) ...
Setting up sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20230311) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.18) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Processing triggers for libc-bin (2.36-9+rpi1+deb12u1) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.40-2+rpi2 dpkg-dev_1.21.22+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-9+rpi1+deb12u1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.1.38-1+rpi1
Package versions: adduser_3.137 apt_2.7.3 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13+rpi1 base-passwd_3.6.1 bash_5.2.15-2 binutils_2.40-2+rpi2 binutils-arm-linux-gnueabihf_2.40-2+rpi2 binutils-common_2.40-2+rpi2 bison_2:3.8.2+dfsg-1 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20230311 catch2_2.13.10-1 clang-15_1:15.0.6-4+rpi1+b1 cmake_3.27.6-1 cmake-data_3.27.6-1 coreutils_9.1-1 cpp_4:12.2.0-3+rpi1 cpp-12_12.2.0-14+rpi1 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.6 debianutils_5.13 dh-autoreconf_20 dh-python_6.20230825 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dirmngr_2.2.40-1.1 docutils-common_0.19+dfsg-7 doxygen_1.9.4-4 dpkg_1.21.22+rpi1 dpkg-dev_1.21.22+rpi1 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-4 flex_2.6.4-8.2 fontconfig_2.14.2-6 fontconfig-config_2.14.2-6 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 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python3-pandas_1.5.3+dfsg-6 python3-pandas-lib_1.5.3+dfsg-6 python3-pil_10.0.0-1 python3-pkg-resources_68.1.2-1 python3-pygments_2.15.1+dfsg-1 python3-recommonmark_0.7.1+ds-5 python3-requests_2.31.0+dfsg-1 python3-roman_3.3-3 python3-six_1.16.0-4 python3-snowballstemmer_2.2.0-4 python3-sphinx_5.3.0-7 python3-sqlalchemy_1.4.46+ds1-1+rpi1 python3-tz_2023.3.post1-1 python3-urllib3_1.26.16-1 python3-yaml_6.0.1-1 python3.11_3.11.5-3 python3.11-dev_3.11.5-3 python3.11-minimal_3.11.5-3 rapidjson-dev_1.1.0+dfsg2-7.1 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rdkit-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sgml-base_1.31 shared-mime-info_2.2-1 sphinx-common_5.3.0-7 ssl-cert_1.1.2 sysvinit-utils_3.07-1 t1utils_1.41-4 tar_1.34+dfsg-1.2 tex-common_6.18 tex-gyre_20180621-6 texlive-base_2023.20230613-3 texlive-binaries_2023.20230311.66589-6 texlive-fonts-recommended_2023.20230613-3 texlive-latex-base_2023.20230613-3 texlive-latex-extra_2023.20230613-2 texlive-latex-recommended_2023.20230613-3 texlive-pictures_2023.20230613-3 tzdata_2023c-10 ucf_3.0043+nmu1 usrmerge_37 util-linux_2.39.2-1 util-linux-extra_2.39.2-1 uuid-dev_2.39.2-1 x11-common_1:7.7+23 x11proto-core-dev_2023.2-1 x11proto-dev_2023.2-1 xdg-utils_1.1.3-4.1 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+6 xml-core_0.18+nmu1 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.4.0-1 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: Signature made Thu Sep 21 08:46:01 2023 UTC
gpgv:                using RSA key 5C48FE6157F49179597087C64C5A6BAB12D2A7AE
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./rdkit_202303.3-3.dsc: no acceptable signature found
dpkg-source: info: extracting rdkit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking rdkit_202303.3.orig.tar.xz
dpkg-source: info: unpacking rdkit_202303.3-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying NoDownloads.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: warning: unexpected end of diff '/<<PKGBUILDDIR>>/debian/patches/sphinx_imgconverter.patch'
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying catch2_header.patch
dpkg-source: info: applying postgres_alternative_test_outputs.patch
dpkg-source: info: applying sphinx_compile_fixes.patch
dpkg-source: info: applying extra_float_digits
dpkg-source: info: applying pg16

Check disc space
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Sufficient free space for build

User Environment
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APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
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PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
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dpkg-buildpackage
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dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 202303.3-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
pg_buildext checkcontrol
supported-versions: WARNING! Unknown distribution ID in /etc/os-release: raspbian
debian found in ID_LIKE, treating as Debian
dh clean --with python3 --buildsystem=cmake
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make[1]: Entering directory '/<<PKGBUILDDIR>>'
find /<<PKGBUILDDIR>> -name "*.pyc" | xargs rm -f
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rm -f -r Docs/Book/_build Code/docs rdkit/docs Code/doxygen_sqlite3.db
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Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_reference.log \
Code/ForceField/MMFF/test_data/MMFF94s_reference.log \
Code/ForceField/MMFF/test_data/testMMFFForceField.log \
Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf \
Code/GraphMol/Depictor/test_data/collisions.out.sdf \
Code/GraphMol/Depictor/test_data/first_200.out.sdf \
Code/GraphMol/Depictor/test_data/test1.out.sdf \
Code/GraphMol/FileParsers/test_data/blah.sdf \
Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.tdt \
Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf \
Code/GraphMol/FileParsers/test_data/outSmiles.csv \
Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf \
Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf \
Code/GraphMol/SLNParse/lex.yysln.cpp \
Code/GraphMol/SLNParse/sln.tab.cpp \
Code/GraphMol/SLNParse/sln.tab.hpp \
Code/GraphMol/SmilesParse/lex.yysmarts.cpp \
Code/GraphMol/SmilesParse/lex.yysmiles.cpp \
Code/GraphMol/SmilesParse/smarts.tab.cpp \
Code/GraphMol/SmilesParse/smarts.tab.hpp \
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Code/RDGeneral/versions.cpp \
Docs/Book/Cartridge.rst \
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Docs/Book/Overview.rst \
rdkit/ML/Data/test_data/testgeneral.dat.pkl \
rdkit/ML/Data/test_data/testquant.qdat.pkl
rm -f Code/RDGeneral/versions.h rdkit/sping/tests/testallps.ps
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make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DPYTHON_EXECUTABLE=/usr/bin/python3.11 ../
	cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DRDK_INSTALL_COMIC_FONTS=OFF -DRDK_BUILD_CAIRO_SUPPORT=ON -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DCATCH_DIR=/usr/include/catch2 -DPYTHON_EXECUTABLE=/usr/bin/python3.11 ../ ..
-- The C compiler identification is GNU 12.2.0
-- The CXX compiler identification is GNU 12.2.0
-- Detecting C compiler ABI info
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-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
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-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Catch2: /usr/include/catch2
CATCH: /usr/include/catch2
CMake Warning (dev) at CMakeLists.txt:276 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

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-- Found PythonInterp: /usr/bin/python3.11 (found version "3.11.5") 
CMake Warning (dev) at CMakeLists.txt:285 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.11.so (found version "3.11.5") 
CMake Warning (dev) at Code/cmake/Modules/FindNumPy.cmake:10 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  CMakeLists.txt:300 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Warning at /usr/share/cmake-3.27/Modules/FindBoost.cmake:2233 (message):
  No header defined for python-py311; skipping header check (note:
  header-only libraries have no designated component)
Call Stack (most recent call first):
  CMakeLists.txt:314 (find_package)


Python Install directory /usr/lib/python3.11/site-packages
PYTHON Py_ENABLE_SHARED: 1
PYTHON USING LINK LINE: -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2
nbval not found, disabling the jupyter tests
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0") 
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: system serialization iostreams regex 
== Using strict rotor definition
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: system iostreams regex 
-- maeparser include dir set as '/usr/include'
-- maeparser libraries set as '/usr/lib/arm-linux-gnueabihf/libmaeparser.so'
-- Found maeparser: /usr/include  
-- coordgen include dir set as /usr/include
-- coordgen libraries set as '/usr/lib/arm-linux-gnueabihf/libcoordgen.so'
-- Found coordgen: /usr/include  
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: iostreams regex 
-- Found Boost: /usr/include (found suitable version "1.74.0", minimum required is "1.58.0") found components: system iostreams regex 
-- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.13")  
CMake Warning (dev) at Code/GraphMol/FilterCatalog/CMakeLists.txt:8 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") 
-- Found Cairo: /usr/include/cairo  
-- Found Freetype: /usr/lib/arm-linux-gnueabihf/libfreetype.so (found version "2.13.2") 
-- Could NOT find Boost (missing: program_options) (found suitable version "1.74.0", minimum required is "1.58.0")
-- Configuring done (18.5s)
-- Generating done (9.3s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_RUNSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR
    FETCHCONTENT_FULLY_DISCONNECTED


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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeneral.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1 ../../lib/libRDKitRDGeneral.so
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -MF CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o.d -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
In file included from /usr/include/c++/12/functional:64,
                 from /usr/include/catch2/catch.hpp:3483,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/catch_main.cpp:11:
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
In file included from /usr/include/c++/12/bits/stl_algo.h:60:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Distance = int; _Tp = pair<long long unsigned int, const Catch::TestCase*>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  2%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -MF CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o.d -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.cpp
[  2%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o  ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Built target EigenSolvers
[  2%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -MF CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o.d -o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.cpp:15:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[  3%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2023.03.3 CMakeFiles/RDBoost.dir/Wrap.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target RDBoost
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o -MF CMakeFiles/DataStructs.dir/Utils.cpp.o.d -o CMakeFiles/DataStructs.dir/Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Utils.cpp
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o -MF CMakeFiles/testDict.dir/testDict.cpp.o.d -o CMakeFiles/testDict.dir/testDict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o -MF CMakeFiles/DataStructs.dir/base64.cpp.o.d -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/base64.cpp
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o -MF CMakeFiles/testRDValue.dir/testRDValue.cpp.o.d -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o -MF CMakeFiles/DataStructs.dir/BitOps.cpp.o.d -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]',
    inlined from 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)' at /usr/include/catch2/catch.hpp:12875:39:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, const Catch::TestCase*}; _Tp = std::pair<long long unsigned int, const Catch::TestCase*>; _Alloc = std::allocator<std::pair<long long unsigned int, const Catch::TestCase*> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<long long unsigned int, const Catch::TestCase*> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void testGithub2910()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:717:13:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void testGithub2910()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:718:13:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void testGithub2910()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:719:13:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void testGithub940()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:55:16:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/memory:66,
                 from /usr/include/boost/iostreams/stream_buffer.hpp:15,
                 from /usr/include/boost/iostreams/stream.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:18:
/usr/include/c++/12/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]':
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  113 |     __do_uninit_copy(_InputIterator __first, _InputIterator __last,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1617:35,
    inlined from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/vector.tcc:232:44,
    inlined from 'RDKit::Dict& RDKit::Dict::operator=(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:114:21:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:36,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:601:31,
    inlined from 'RDKit::Dict::Dict(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:51:29:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -MF CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o.d -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void testRDAny()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:173:18:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void testVector() [with T = double]' at /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:71:17:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void testVector() [with T = double]' at /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:72:17:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testVector() [with T = double]' at /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:73:17:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator<long double>]',
    inlined from 'void testVector() [with T = long double]' at /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:71:17:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long double; _Alloc = std::allocator<long double>]',
    inlined from 'void testVector() [with T = long double]' at /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:72:17:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long double; _Alloc = std::allocator<long double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testVector() [with T = long double]' at /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:73:17:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -MF CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o.d -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testVectToString()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:444:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testVectToString()' at /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:445:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  4%] Linking CXX executable testRDValue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDValue.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testRDValue.dir/testRDValue.cpp.o -o testRDValue  ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Built target testRDValue
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o -MF CMakeFiles/DataStructs.dir/FPBReader.cpp.o.d -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp
[  4%] Linking CXX executable testDict
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDict.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testDict.dir/testDict.cpp.o -o testDict  ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Built target testDict
make  -f Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/build.make Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/RDGeneral/CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o -MF CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o.d -o CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testConcurrentQueue.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, const Catch::TestCase*}; _Tp = std::pair<long long unsigned int, const Catch::TestCase*>; _Alloc = std::allocator<std::pair<long long unsigned int, const Catch::TestCase*> >]',
    inlined from 'std::vector<Catch::TestCase> Catch::sortTests(const IConfig&, const std::vector<TestCase>&)' at /usr/include/catch2/catch.hpp:14244:47:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<Catch::TestCase> Catch::sortTests(const IConfig&, const std::vector<TestCase>&)' at /usr/include/catch2/catch.hpp:14247:26:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<long long unsigned int, const Catch::TestCase*>*, vector<pair<long long unsigned int, const Catch::TestCase*> > >; _Compare = Catch::sortTests(const IConfig&, const std::vector<TestCase>&)::<lambda(const hashedTest&, const hashedTest&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<Catch::TestCase> Catch::sortTests(const IConfig&, const std::vector<TestCase>&)' at /usr/include/catch2/catch.hpp:14247:26:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<long long unsigned int, const Catch::TestCase*>*, std::vector<std::pair<long long unsigned int, const Catch::TestCase*> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o -MF CMakeFiles/rdBase.dir/RDBase.cpp.o.d -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp
[  5%] Linking CXX executable testConcurrentQueue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConcurrentQueue.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testConcurrentQueue.dir/testConcurrentQueue.cpp.o -o testConcurrentQueue  ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testConcurrentQueue
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -MF CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o.d -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
                 from /usr/include/c++/12/algorithm:61,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:25,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Distance = int; _Tp = pair<double, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:28&, const auto:29&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:28&, const auto:29&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:28&, const auto:29&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1844:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1844 |     __final_insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1844:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:27:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&, long long unsigned int}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&, long long unsigned int}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]',
    inlined from 'void RDKit::detail::tanimotoNeighbors(const FPBReader_impl*, const uint8_t*, double, std::vector<std::pair<double, unsigned int> >&, bool, unsigned int)' at /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:474:25:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&, long long unsigned int&}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&, long long unsigned int&}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]',
    inlined from 'void RDKit::detail::tverskyNeighbors(const FPBReader_impl*, const uint8_t*, double, double, double, std::vector<std::pair<double, unsigned int> >&, bool)' at /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:528:23:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:28&, const auto:29&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:28&, const auto:29&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Compare = Rankers::<lambda(const auto:28&, const auto:29&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTverskyNeighbors(const uint8_t*, double, double, double, bool) const' at /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:745:12:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1940:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1940 |           std::__final_insertion_sort(__first, __last, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:28&, const auto:29&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<double, unsigned int>*, vector<pair<double, unsigned int> > >; _Compare = Rankers::<lambda(const auto:28&, const auto:29&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTanimotoNeighbors(const uint8_t*, double, bool) const' at /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:711:12:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1940:38: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1940 |           std::__final_insertion_sort(__first, __last, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o -MF CMakeFiles/testMatrices.dir/testMatrices.cpp.o.d -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testMatrices.cpp
In file included from /usr/include/c++/12/algorithm:61,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/12/bits/stl_algo.h:60:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Distance = int; _Tp = tuple<double, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -P CMakeFiles/rdkitCatch.dir/cmake_clean_target.cmake
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdkitCatch.dir/link.txt --verbose=1
/usr/bin/ar qc librdkitCatch.a CMakeFiles/rdkitCatch.dir/catch_main.cpp.o
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake "--color="
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[  6%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o -MF CMakeFiles/Catalogs.dir/Catalog.cpp.o.d -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::tuple<double, unsigned int, unsigned int>}; _Tp = std::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<std::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::tuple<double, unsigned int, unsigned int> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::tuple<double, unsigned int, unsigned int>}; _Tp = std::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<std::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<std::tuple<double, unsigned int, unsigned int> >&, T, const sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const sim_args*)]' at /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:125:12:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<tuple<double, unsigned int, unsigned int>*, vector<tuple<double, unsigned int, unsigned int> > >; _Compare = RDKit::{anonymous}::<lambda(const RDKit::MultiFPBReader::ResultTuple&, const RDKit::MultiFPBReader::ResultTuple&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<std::tuple<double, unsigned int, unsigned int> >&, T, const sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const sim_args*)]' at /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:125:12:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<double, unsigned int, unsigned int>*, std::vector<std::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2023.03.3 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -MF CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o.d -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
[  6%] Linking CXX executable testMatCalc
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -o testMatCalc  ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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make  -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -MF CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o.d -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[  6%] Linking CXX executable testQuery
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/cmake -E cmake_link_script CMakeFiles/testQuery.dir/link.txt --verbose=1
[  6%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -MF CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o.d -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.cpp
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testQuery.dir/test.cpp.o -o testQuery  ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o -MF CMakeFiles/Clustering.dir/Clustering.cpp.o.d -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/Clustering.cpp
In file included from /usr/include/c++/12/bits/specfun.h:45,
                 from /usr/include/c++/12/cmath:1935,
                 from /usr/include/c++/12/math.h:36,
                 from /usr/include/python3.11/pyport.h:218,
                 from /usr/include/python3.11/Python.h:38,
                 from /usr/include/boost/python/detail/wrap_python.hpp:178,
                 from /usr/include/boost/python/detail/prefix.hpp:13,
                 from /usr/include/boost/python/args.hpp:8:
/usr/include/c++/12/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]':
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 2059 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  189 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  739 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Tp = double]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:279:49:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Tp = double]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:286:53,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:273:9:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Tp = double]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:279:49:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Tp = double]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:286:53,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:273:9:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  6%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMetricMatrixCalc.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o  ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target rdMetricMatrixCalc
make  -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -MF CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o.d -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp
[  6%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -MF CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o.d -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/Clustering.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[  6%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2023.03.3 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o  ../../lib/libRDKithc.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[  6%] Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Clustering.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/Cluster/Clustering.so CMakeFiles/Clustering.dir/Clustering.cpp.o  ../../../../lib/libRDKithc.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2023.03.3 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target Clustering
[  6%] Built target SimDivPickers
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make  -f Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/build.make Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/build.make Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o -MF CMakeFiles/RDGeometryLib.dir/point.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/point.cpp
[  8%] Building CXX object Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/RDGeneral/CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o -MF CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o.d -o CMakeFiles/dictTestsCatch.dir/catch_dict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/catch_dict.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::pair<double, int>&}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]',
    inlined from 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = std::pair<double, int>; _Sequence = std::vector<std::pair<double, int> >; _Compare = RDInfoTheory::gtDIPair]' at /usr/include/c++/12/bits/stl_queue.h:740:13,
    inlined from 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)' at /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:205:18:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]',
    inlined from 'void std::priority_queue<_Tp, _Sequence, _Compare>::push(const value_type&) [with _Tp = std::pair<double, int>; _Sequence = std::vector<std::pair<double, int> >; _Compare = RDInfoTheory::gtDIPair]' at /usr/include/c++/12/bits/stl_queue.h:740:13,
    inlined from 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)' at /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:208:18:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[  8%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2023.03.3 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2023.03.3 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target InfoTheory
make  -f Code/RDGeneral/CMakeFiles/logTestsCatch.dir/build.make Code/RDGeneral/CMakeFiles/logTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/logTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/logTestsCatch.dir/build.make Code/RDGeneral/CMakeFiles/logTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Building CXX object Code/RDGeneral/CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/RDGeneral/CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o -MF CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o.d -o CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/catch_logs.cpp
[  8%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.cpp
In file included from /usr/include/c++/12/vector:64:
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:134:28,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:128:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_delete_slice(Container&, PySliceObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:697:42,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:256:49:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_item(Container&, index_type) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:124:28,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:263:41:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:134:28,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:128:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_delete_slice(Container&, PySliceObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:697:42,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:256:49:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_item(Container&, index_type) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:124:28,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:263:41:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/catch_dict.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]' at /usr/include/boost/python/suite/indexing/container_utils.hpp:36:36:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]' at /usr/include/boost/python/suite/indexing/container_utils.hpp:44:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::extend(Container&, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:200:29,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:236:36:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::extend(Container&, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:200:29,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:236:36:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:212:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:220:44,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:206:9:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:212:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:220:44,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:206:9:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:664:43:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:672:47:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:116:32,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
[  8%] Linking CXX executable logTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/logTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/logTestsCatch.dir/catch_logs.cpp.o -o logTestsCatch  librdkitCatch.a ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:664:43:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:672:47:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:116:32,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/DataStructs/CMakeFiles/testFPB.dir/testFPB.cpp.o -MF CMakeFiles/testFPB.dir/testFPB.cpp.o.d -o CMakeFiles/testFPB.dir/testFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testFPB.cpp
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.cpp
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -MF CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp
[  9%] Linking CXX executable testFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFPB.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testFPB.dir/testFPB.cpp.o -o testFPB  ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/DataStructs/CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -MF CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o.d -o CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testMultiFPB.cpp
[  9%] Linking CXX shared module ../../../rdkit/rdBase.so
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/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o  ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake "--color="
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[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o -MF CMakeFiles/cDataStructs.dir/DataStructs.cpp.o.d -o CMakeFiles/cDataStructs.dir/DataStructs.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DataStructs.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h:14,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = ExplicitBitVect]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -MF CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o.d -o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DataStructs.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'std::vector<RDGeom::Point3D> RDGeom::findGridTerminalPoints(const UniformGrid3D&, double, double)' at /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:163:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[  9%] Linking CXX shared library ../../lib/libRDKitRDGeometryLib.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeometryLib.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o  ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target RDGeometryLib
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -MF CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o.d -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/testPickers.cpp
[ 10%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -MF CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o.d -o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DiscreteValueVect.cpp
[ 10%] Linking CXX executable testDataStructs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -o testDataStructs  ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target testDataStructs
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -MF CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp
[ 10%] Linking CXX executable testSimDivPickers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -o testSimDivPickers  ../../lib/libRDKitSimDivPickers.so.1.2023.03.3 ../../lib/libRDKithc.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target testSimDivPickers
make  -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -MF CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o.d -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
[ 11%] Linking CXX executable testMultiFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultiFPB.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -o testMultiFPB  ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target testMultiFPB
[ 11%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -MF CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o.d -o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DiscreteValueVect.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 12%] Linking CXX executable pickersTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/pickersTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -o pickersTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSimDivPickers.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKithc.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target pickersTestsCatch
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -MF CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o.d -o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp
[ 12%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -MF CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o.d -o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -MF CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o.d -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcQuantize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o -MF CMakeFiles/cQuantize.dir/cQuantize.cpp.o.d -o CMakeFiles/cQuantize.dir/cQuantize.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Data/cQuantize.cpp
[ 12%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -MF CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o.d -o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/ML/Data/cQuantize.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
[ 13%] Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/cmake -E cmake_link_script CMakeFiles/cQuantize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o  ../../../lib/libRDKitSimDivPickers.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKithc.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o  ../../../lib/libRDKitInfoTheory.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target cQuantize
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o
[ 13%] Built target rdSimDivPickers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -MF CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o.d -o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp
make  -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
[ 13%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemicalFeatures_EXPORTS -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -MF CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o.d -o CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.cpp
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o -MF CMakeFiles/GraphMol.dir/Atom.cpp.o.d -o CMakeFiles/GraphMol.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp
[ 13%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2023.03.3 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2023.03.3 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target ChemicalFeatures
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -MF CMakeFiles/GraphMol.dir/QueryAtom.cpp.o.d -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -MF CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o.d -o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o -MF CMakeFiles/GraphMol.dir/QueryBond.cpp.o.d -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.cpp
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_SparseBV.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o -MF CMakeFiles/GraphMol.dir/Bond.cpp.o.d -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp
[ 13%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdInfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o  ../../../../lib/libRDKitInfoTheory.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target rdInfoTheory
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_SparseBV.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++ -DAlignment_EXPORTS -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o -MF CMakeFiles/Alignment.dir/AlignPoints.cpp.o.d -o CMakeFiles/Alignment.dir/AlignPoints.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/memory:66,
                 from /usr/include/boost/iostreams/stream_buffer.hpp:15,
                 from /usr/include/boost/iostreams/stream.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Bond.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp:10:
/usr/include/c++/12/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]':
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  113 |     __do_uninit_copy(_InputIterator __first, _InputIterator __last,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1617:35,
    inlined from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/vector.tcc:232:44,
    inlined from 'RDKit::Dict& RDKit::Dict::operator=(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:114:21,
    inlined from 'RDKit::Bond& RDKit::Bond::operator=(const RDKit::Bond&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp:62:19:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:601:31,
    inlined from 'RDKit::Dict::Dict(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:51:29,
    inlined from 'RDKit::RDProps::RDProps(const RDKit::RDProps&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:23:33,
    inlined from 'RDKit::Bond::Bond(const RDKit::Bond&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp:24:46:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o -MF CMakeFiles/GraphMol.dir/MolOps.cpp.o.d -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o -MF CMakeFiles/GraphMol.dir/FindRings.cpp.o.d -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp
[ 13%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2023.03.3 CMakeFiles/Alignment.dir/AlignPoints.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target Alignment
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_BitOps.cpp
make  -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o -MF CMakeFiles/testTransforms.dir/testTransforms.cpp.o.d -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testTransforms.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp: In function 'void RDKit::MolOps::findRingFamilies(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:1348:36: warning: unused parameter 'mol' [-Wunused-parameter]
 1348 | void findRingFamilies(const ROMol &mol) {
      |                       ~~~~~~~~~~~~~^~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_BitOps.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Linking CXX executable testTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testTransforms.dir/testTransforms.cpp.o -o testTransforms  ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Built target testTransforms
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o -MF CMakeFiles/GraphMol.dir/ROMol.cpp.o.d -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::MolOps::{anonymous}::addHapticBond(RDKit::RWMol&, unsigned int, std::vector<unsigned int>)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:990:20,
    inlined from 'void RDKit::MolOps::dativeBondsToHaptic(RDKit::RWMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:1037:20:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:774:20:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:785:22:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:774:20:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:785:22:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_FPB.cpp
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:774:20:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:785:22:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFrags(const RDKit::ROMol&, bool, RDKit::INT_VECT*, RDKit::VECT_INT_VECT*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:655:26:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -MF CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o.d -o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_Utils.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_FPB.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o -MF CMakeFiles/testGrid.dir/testGrid.cpp.o.d -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testGrid.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_Utils.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDKit::ROMol::addAtom(RDKit::Atom*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:426:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/memory:66,
                 from /usr/include/boost/iostreams/stream_buffer.hpp:15,
                 from /usr/include/boost/iostreams/stream.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:18:
/usr/include/c++/12/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]':
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  113 |     __do_uninit_copy(_InputIterator __first, _InputIterator __last,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:601:31,
    inlined from 'RDKit::Dict::Dict(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:51:29,
    inlined from 'RDKit::RDProps::RDProps(const RDKit::RDProps&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:23:33,
    inlined from 'RDKit::SubstanceGroup::SubstanceGroup(const RDKit::SubstanceGroup&)' at /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:99:3:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1617:35,
    inlined from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/vector.tcc:232:44,
    inlined from 'RDKit::Dict& RDKit::Dict::operator=(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:114:21,
    inlined from 'void RDKit::ROMol::initFromOther(const RDKit::ROMol&, bool, int)' at /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:145:21:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o -MF CMakeFiles/GraphMol.dir/RWMol.cpp.o.d -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -MF CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp
[ 15%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[ 15%] Linking CXX executable testGrid
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testGrid.dir/testGrid.cpp.o -o testGrid  ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target testGrid
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -MF CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o.d -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target cDataStructs
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o -MF CMakeFiles/GraphMol.dir/atomic_data.cpp.o.d -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.cpp
In file included from /usr/include/c++/12/bits/stl_algobase.h:64,
                 from /usr/include/c++/12/bits/stl_tree.h:63,
                 from /usr/include/c++/12/map:60,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/12/bits/stl_pair.h: In instantiation of 'constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper<typename decay<_Tp2>::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper<typename decay<_Tp>::type>::__type = double; typename decay<_Tp>::type = double]':
/<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:96:57:   required from here
/usr/include/c++/12/bits/stl_pair.h:741:5: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  741 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
[ 15%] Linking CXX executable geometryTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/geometryTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -o geometryTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target geometryTestsCatch
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o -MF CMakeFiles/rdGeometry.dir/Point.cpp.o.d -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/Point.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::atomicData&}; _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::atomicData>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]',
    inlined from 'RDKit::PeriodicTable::PeriodicTable()' at /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:47:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
make  -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Numerics/CMakeFiles/testConrec.dir/testConrec.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Numerics/CMakeFiles/testConrec.dir/testConrec.cpp.o -MF CMakeFiles/testConrec.dir/testConrec.cpp.o.d -o CMakeFiles/testConrec.dir/testConrec.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o -MF CMakeFiles/GraphMol.dir/QueryOps.cpp.o.d -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:81:48:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:85:26:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:97:29:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:105:29:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDKit::RWMol::addAtom(bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:126:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Wrap/Point.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D, RDGeom::Point2D, double&}; _Tp = conrec::ConrecSegment; _Alloc = std::allocator<conrec::ConrecSegment>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<conrec::ConrecSegment>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D, RDGeom::Point2D, double&}; _Tp = conrec::ConrecSegment; _Alloc = std::allocator<conrec::ConrecSegment>]',
    inlined from 'void conrec::Contour(const double*, size_t, size_t, size_t, size_t, const double*, const double*, size_t, double*, std::vector<ConrecSegment>&)' at /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h:196:27,
    inlined from 'void C_A_T_C_H_T_E_S_T_0()' at /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:59:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<conrec::ConrecSegment*, std::vector<conrec::ConrecSegment> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Linking CXX executable testConrec
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConrec.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testConrec.dir/testConrec.cpp.o -o testConrec  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target testConrec
make  -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o -MF CMakeFiles/testAlignment.dir/testAlignment.cpp.o.d -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/testAlignment.cpp
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o -MF CMakeFiles/GraphMol.dir/MolPickler.cpp.o.d -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp: In function 'void RDKit::streamReadPositiveChar(std::istream&, char&, int)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:71:11: warning: comparison is always false due to limited range of data type [-Wtype-limits]
   71 |   if (res < 0) {
      |       ~~~~^~~
[ 15%] Linking CXX executable testAlignment
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testAlignment.dir/testAlignment.cpp.o -o testAlignment  ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp: In instantiation of 'static RDKit::Atom* RDKit::MolPickler::_addAtomFromPickle(std::istream&, RDKit::ROMol*, RDGeom::Point3D&, int, bool) [with T = int; std::istream = std::basic_istream<char>]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1081:39:   required from 'static void RDKit::MolPickler::_depickle(std::istream&, RDKit::ROMol*, int, int, unsigned int) [with T = int; std::istream = std::basic_istream<char>]'
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:854:27:   required from here
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1666:22: warning: comparison is always false due to limited range of data type [-Wtype-limits]
 1666 |         if ((tmpChar < 0 || tmpChar > 127) && version > 9000) {
      |              ~~~~~~~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp: In instantiation of 'static RDKit::Atom* RDKit::MolPickler::_addAtomFromPickle(std::istream&, RDKit::ROMol*, RDGeom::Point3D&, int, bool) [with T = unsigned char; std::istream = std::basic_istream<char>]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1081:39:   required from 'static void RDKit::MolPickler::_depickle(std::istream&, RDKit::ROMol*, int, int, unsigned int) [with T = unsigned char; std::istream = std::basic_istream<char>]'
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:856:33:   required from here
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1666:22: warning: comparison is always false due to limited range of data type [-Wtype-limits]
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target testAlignment
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -MF CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o.d -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o -MF CMakeFiles/GraphMol.dir/Canon.cpp.o.d -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp
[ 16%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -MF CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o.d -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/UniformGrid3D.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Wrap/UniformGrid3D.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Numerics/rdAlignment.so CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o  ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target rdAlignment
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -MF CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o.d -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/testChemicalFeatures.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -MF CMakeFiles/GraphMol.dir/AtomIterators.cpp.o.d -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.cpp
[ 16%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -MF CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o.d -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/rdGeometry.cpp
[ 16%] Linking CXX executable testChemicalFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -o testChemicalFeatures  ../../lib/libRDKitChemicalFeatures.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target testChemicalFeatures
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o -MF CMakeFiles/GraphMol.dir/BondIterators.cpp.o.d -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.cpp
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -MF CMakeFiles/GraphMol.dir/Aromaticity.cpp.o.d -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Wrap/rdGeometry.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o -MF CMakeFiles/GraphMol.dir/Kekulize.cpp.o.d -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Kekulize.cpp
[ 17%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Geometry/rdGeometry.so CMakeFiles/rdGeometry.dir/Point.cpp.o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target rdGeometry
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -MF CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o.d -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ConjugHybrid.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o -MF CMakeFiles/GraphMol.dir/AddHs.cpp.o.d -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o -MF CMakeFiles/GraphMol.dir/Matrices.cpp.o.d -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Kekulize.cpp: In function 'void RDKit::{anonymous}::markDbondCands(RDKit::RWMol&, const RDKit::INT_VECT&, boost::dynamic_bitset<>&, RDKit::INT_VECT&, RDKit::INT_VECT&)':
/<<PKGBUILDDIR>>/Code/GraphMol/Kekulize.cpp:147:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  147 |         numNonCandRings < numAtomRings) {
      |         ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o -MF CMakeFiles/GraphMol.dir/Chirality.cpp.o.d -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o -MF CMakeFiles/GraphMol.dir/RingInfo.cpp.o.d -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o -MF CMakeFiles/GraphMol.dir/Conformer.cpp.o.d -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearProp(const std::string&) const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:145:21:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o -MF CMakeFiles/GraphMol.dir/Renumber.cpp.o.d -o CMakeFiles/GraphMol.dir/Renumber.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearComputedProps() const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:153:25,
    inlined from 'void RDKit::MolOps::addHs(RDKit::RWMol&, bool, bool, const RDKit::UINT_VECT*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:531:30:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -MF CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o.d -o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AdjustQuery.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o -MF CMakeFiles/GraphMol.dir/Resonance.cpp.o.d -o CMakeFiles/GraphMol.dir/Resonance.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:76:37:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:78:24:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/property_map/vector_property_map.hpp:14,
                 from /usr/include/boost/property_map/property_map.hpp:602,
                 from /usr/include/boost/graph/adjacency_list.hpp:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AdjustQuery.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -MF CMakeFiles/GraphMol.dir/StereoGroup.cpp.o.d -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o -MF CMakeFiles/GraphMol.dir/new_canon.cpp.o.d -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -MF CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o.d -o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindStereo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/FindStereo.cpp.o -MF CMakeFiles/GraphMol.dir/FindStereo.cpp.o.d -o CMakeFiles/GraphMol.dir/FindStereo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FindStereo.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o -MF CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o.d -o CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o -MF CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o.d -o CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/NontetrahedralStereo.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::array<RDGeom::Point3D, 3>&}; _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::array<RDGeom::Point3D, 3> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]',
    inlined from 'void RDKit::SubstanceGroup::addBracket(const Bracket&)' at /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:133:23:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::SubstanceGroup::CState>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::SubstanceGroup::addCState(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:147:22:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o -MF CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o.d -o CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/WedgeBonds.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FindStereo.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2023.03.3 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o CMakeFiles/GraphMol.dir/FindStereo.cpp.o CMakeFiles/GraphMol.dir/MonomerInfo.cpp.o CMakeFiles/GraphMol.dir/NontetrahedralStereo.cpp.o CMakeFiles/GraphMol.dir/WedgeBonds.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target GraphMol
make  -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make  -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make  -f Code/GraphMol/GenericGroups/CMakeFiles/GenericGroups.dir/build.make Code/GraphMol/GenericGroups/CMakeFiles/GenericGroups.dir/depend
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups/CMakeFiles/GenericGroups.dir/DependInfo.cmake "--color="
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 19%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o
[ 19%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -MF CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o.d -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DTrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o -MF CMakeFiles/Trajectory.dir/Trajectory.cpp.o.d -o CMakeFiles/Trajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp
[ 21%] Building CXX object Code/GraphMol/GenericGroups/CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -MF CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DGenericGroups_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GENERICGROUPS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/GenericGroups/CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o -MF CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o.d -o CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/GenericGroups.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:103:49:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:105:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/12/bits/vector.tcc:133:5: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' changed in GCC 7.1
  133 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp: In member function 'unsigned int RDKit::Trajectory::insertSnapshot(unsigned int, RDKit::Snapshot)':
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:78:33: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' changed in GCC 7.1
   78 |   return (d_snapshotVect->insert(d_snapshotVect->begin() + snapshotNum, s) -
      |           ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2023.03.3 CMakeFiles/Trajectory.dir/Trajectory.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target Trajectory
make  -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -MF CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o.d -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp:26:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/algorithm:61,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp:10:
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/GenericGroups.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/GenericGroups.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algo.h:60:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Distance = int; _Tp = pair<unsigned int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int&, double&}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int&, double&}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]',
    inlined from 'RDGeom::Transform3D* MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp:286:35:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'RDGeom::Transform3D* MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp:288:16:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)::<lambda(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'RDGeom::Transform3D* MolTransforms::computeCanonicalTransform(const RDKit::Conformer&, const RDGeom::Point3D*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp:288:16:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitGenericGroups.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups && /usr/bin/cmake -E cmake_link_script CMakeFiles/GenericGroups.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitGenericGroups.so.1 -o ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 CMakeFiles/GenericGroups.dir/GenericGroups.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -MF CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1 ../../../lib/libRDKitGenericGroups.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target GenericGroups
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -MF CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target MolTransforms
[ 21%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -MF CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o.d -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -MF CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o.d -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const RDKit::PATH_TYPE&, bool, RDKit::INT_MAP_INT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:95:55:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const RDKit::PATH_TYPE&, bool, RDKit::INT_MAP_INT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:99:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target Subgraphs
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -MF CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o.d -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
make  -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -MF CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o.d -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
make  -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -MF CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o.d -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -MF CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o.d -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void RDKit::computeGasteigerCharges(const ROMol&, std::vector<double>&, int, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:120:15:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void RDKit::computeGasteigerCharges(const ROMol&, std::vector<double>&, int, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:123:14:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void RDKit::computeGasteigerCharges(const ROMol&, std::vector<double>&, int, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:126:15:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -MF CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o.d -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/algorithm/string/detail/classification.hpp:16,
                 from /usr/include/boost/algorithm/string/classification.hpp:18,
                 from /usr/include/boost/algorithm/string/trim.hpp:23,
                 from /usr/include/boost/algorithm/string.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -MF CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o.d -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitPartialCharges.so.1 -o ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target PartialCharges
make  -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -MF CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o.d -o CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp
[ 21%] Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolTransforms.so CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o  ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target rdMolTransforms
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -MF CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o.d -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smarts.tab.cpp
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&, unsigned int) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:420:16:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&, unsigned int) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:444:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/smart_ptr/detail/shared_count.hpp:37,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2023.03.3 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2023.03.3 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target ShapeHelpers
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -MF CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o.d -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smiles.tab.cpp
[ 21%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -MF CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o.d -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
make  -f Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/DependInfo.cmake "--color="
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[ 21%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o -MF CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o.d -o CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/CIPMol.cpp
[ 22%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2023.03.3 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2023.03.3 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 22%] Built target MolCatalog
[ 22%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -MF CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o.d -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
In file included from /usr/include/c++/12/vector:70,
                 from smarts.yy:9:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from smiles.yy:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 22%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o -MF CMakeFiles/MolInterchange.dir/Parser.cpp.o.d -o CMakeFiles/MolInterchange.dir/Parser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o -MF CMakeFiles/SLNParse.dir/SLNParse.cpp.o.d -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o -MF CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o.d -o CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/CIPLabeler.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -MF CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o.d -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
[ 22%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Mancude.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Mancude.cpp.o -MF CMakeFiles/CIPLabeler.dir/Mancude.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Mancude.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Mancude.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from smiles.ll:25:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp:35:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void RDKit::SLNParse::finalizeQueryMol(RDKit::ROMol*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp:113:17:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 23%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 23%] Built target SmilesParse
[ 23%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -MF CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o.d -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::MolInterchange::{anonymous}::readConformer(RDKit::Conformer*, const rapidjson::Value&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:422:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::array<RDGeom::Point3D, 3>}; _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::array<RDGeom::Point3D, 3> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::SubstanceGroup::CState>::iterator' changed in GCC 7.1
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Digraph.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Digraph.cpp.o -MF CMakeFiles/CIPLabeler.dir/Digraph.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Digraph.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Digraph.cpp
make  -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o -MF CMakeFiles/rdqueries.dir/rdqueries.cpp.o.d -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdqueries.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::array<RDGeom::Point3D, 3>}; _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MolInterchange::{anonymous}::readSubstanceGroups(RDKit::RWMol*, const rapidjson::Value&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:334:35:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MolInterchange::{anonymous}::readSubstanceGroups(RDKit::RWMol*, const rapidjson::Value&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:353:34:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::MolInterchange::{anonymous}::processMol.constprop(RDKit::RWMol*, const rapidjson::Value&, const DefaultValueCache&, const DefaultValueCache&, const RDKit::MolInterchange::JSONParseParameters&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:881:52:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp:37:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdqueries.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Node.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Node.cpp.o -MF CMakeFiles/CIPLabeler.dir/Node.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Node.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Node.cpp
[ 24%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o -MF CMakeFiles/MolInterchange.dir/Writer.cpp.o.d -o CMakeFiles/MolInterchange.dir/Writer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Writer.cpp
[ 24%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o -MF CMakeFiles/SLNParse.dir/sln.tab.cpp.o.d -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/sln.tab.cpp
[ 24%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o -MF CMakeFiles/rdqueries.dir/Queries.cpp.o.d -o CMakeFiles/rdqueries.dir/Queries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Queries.cpp
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Edge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Edge.cpp.o -MF CMakeFiles/CIPLabeler.dir/Edge.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Edge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Edge.cpp
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Sort.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/Sort.cpp.o -MF CMakeFiles/CIPLabeler.dir/Sort.cpp.o.d -o CMakeFiles/CIPLabeler.dir/Sort.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Sort.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Queries.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from sln.yy:40:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o -MF CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o.d -o CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Configuration.cpp
[ 24%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -MF CMakeFiles/SLNParse.dir/lex.yysln.cpp.o.d -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/lex.yysln.cpp
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o -MF CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o.d -o CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Sp2Bond.cpp
[ 24%] Linking CXX shared library ../../../lib/libRDKitMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolInterchange.so.1 -o ../../../lib/libRDKitMolInterchange.so.1.2023.03.3 CMakeFiles/MolInterchange.dir/Parser.cpp.o CMakeFiles/MolInterchange.dir/Writer.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInterchange.so.1.2023.03.3 ../../../lib/libRDKitMolInterchange.so.1 ../../../lib/libRDKitMolInterchange.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Built target MolInterchange
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o -MF CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o.d -o CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Tetrahedral.cpp
[ 24%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2023.03.3 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2023.03.3 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Built target SLNParse
make  -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -MF CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o.d -o CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Trajectory.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Sp2Bond.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -MF CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o.d -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
[ 24%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdqueries.so CMakeFiles/rdqueries.dir/rdqueries.cpp.o CMakeFiles/rdqueries.dir/Queries.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Trajectory.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Built target rdqueries
[ 24%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -MF CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o.d -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Configuration.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Tetrahedral.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Tetrahedral.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule1a.cpp
[ 24%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule1b.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule2.cpp
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -MF CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o.d -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -MF CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o.d -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdTrajectory.cpp
[ 25%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule3.cpp
[ 25%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../../lib/libRDKitChemicalFeatures.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[ 25%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule4a.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Built target rdChemicalFeatures
[ 25%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4b.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4b.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule4b.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule4b.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule4b.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdTrajectory.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 26%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target rdtrajectory
[ 26%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4c.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule4c.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule4c.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule4c.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule4c.cpp
[ 26%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -MF CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o.d -o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp
make  -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -MF CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o.d -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.cpp
[ 26%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule5.cpp
[ 26%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule5New.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 26%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -MF CMakeFiles/Optimizer.dir/LinearSearch.cpp.o.d -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/LinearSearch.cpp
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -MF CMakeFiles/graphmolcpTest.dir/cptest.cpp.o.d -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp
[ 26%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule6.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2023.03.3 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target Optimizer
[ 27%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/SequenceRule.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DCIPLabeler_EXPORTS -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/CIPLabeler.dir/rules/SequenceRule.cpp.o -MF CMakeFiles/CIPLabeler.dir/rules/SequenceRule.cpp.o.d -o CMakeFiles/CIPLabeler.dir/rules/SequenceRule.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/SequenceRule.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {unsigned int, double}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {unsigned int, double}; _Tp = std::pair<unsigned int, double>; _Alloc = std::allocator<std::pair<unsigned int, double> >]',
    inlined from 'RDKit::detail::ScoreMatchesByDegreeOfCoreSubstitution::ScoreMatchesByDegreeOfCoreSubstitution(const RDKit::ROMol&, const RDKit::ROMol&, const std::vector<std::vector<std::pair<int, int> > >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:50:37:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 27%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -MF CMakeFiles/graphmolIterTest.dir/itertest.cpp.o.d -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/itertest.cpp
In file included from /usr/include/c++/12/functional:64,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:18:
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
In file included from /usr/include/c++/12/bits/stl_algo.h:60:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Distance = int; _Tp = pair<unsigned int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<std::vector<std::pair<int, int> > > RDKit::detail::ScoreMatchesByDegreeOfCoreSubstitution::sortMatchesByDegreeOfCoreSubstitution()' at /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:63:16,
    inlined from 'std::vector<std::vector<std::pair<int, int> > > RDKit::sortMatchesByDegreeOfCoreSubstitution(const ROMol&, const ROMol&, const std::vector<std::vector<std::pair<int, int> > >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:216:60:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)>]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<unsigned int, double>*, vector<pair<unsigned int, double> > >; _Compare = bool (*)(const pair<unsigned int, double>&, const pair<unsigned int, double>&)]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<std::vector<std::pair<int, int> > > RDKit::detail::ScoreMatchesByDegreeOfCoreSubstitution::sortMatchesByDegreeOfCoreSubstitution()' at /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:63:16,
    inlined from 'std::vector<std::vector<std::pair<int, int> > > RDKit::sortMatchesByDegreeOfCoreSubstitution(const ROMol&, const ROMol&, const std::vector<std::vector<std::pair<int, int> > >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp:216:60:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, double>*, std::vector<std::pair<unsigned int, double> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 28%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o  ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Linking CXX executable graphmolcpTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
[ 28%] Built target SubstructMatch
make  -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -o graphmolcpTest  ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -MF CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o.d -o CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target graphmolcpTest
make  -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -MF CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o.d -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test-valgrind.cpp
[ 28%] Linking CXX shared library ../../../lib/libRDKitCIPLabeler.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/cmake -E cmake_link_script CMakeFiles/CIPLabeler.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitCIPLabeler.so.1 -o ../../../lib/libRDKitCIPLabeler.so.1.2023.03.3 CMakeFiles/CIPLabeler.dir/CIPMol.cpp.o CMakeFiles/CIPLabeler.dir/CIPLabeler.cpp.o CMakeFiles/CIPLabeler.dir/Mancude.cpp.o CMakeFiles/CIPLabeler.dir/Digraph.cpp.o CMakeFiles/CIPLabeler.dir/Node.cpp.o CMakeFiles/CIPLabeler.dir/Edge.cpp.o CMakeFiles/CIPLabeler.dir/Sort.cpp.o CMakeFiles/CIPLabeler.dir/configs/Configuration.cpp.o CMakeFiles/CIPLabeler.dir/configs/Sp2Bond.cpp.o CMakeFiles/CIPLabeler.dir/configs/Tetrahedral.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule1a.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule1b.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule2.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule3.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule4a.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule4b.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule4c.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule5.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule5New.cpp.o CMakeFiles/CIPLabeler.dir/rules/Rule6.cpp.o CMakeFiles/CIPLabeler.dir/rules/SequenceRule.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitCIPLabeler.so.1.2023.03.3 ../../../lib/libRDKitCIPLabeler.so.1 ../../../lib/libRDKitCIPLabeler.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target CIPLabeler
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/moliteratorTestsCatch.dir/DependInfo.cmake "--color="
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[ 28%] Building CXX object Code/GraphMol/CMakeFiles/moliteratorTestsCatch.dir/catch_moliterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/moliteratorTestsCatch.dir/catch_moliterators.cpp.o -MF CMakeFiles/moliteratorTestsCatch.dir/catch_moliterators.cpp.o.d -o CMakeFiles/moliteratorTestsCatch.dir/catch_moliterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_moliterators.cpp
[ 29%] Linking CXX executable graphmolIterTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -o graphmolIterTest  ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 29%] Built target graphmolIterTest
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/queryTestsCatch.dir/DependInfo.cmake "--color="
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[ 29%] Building CXX object Code/GraphMol/CMakeFiles/queryTestsCatch.dir/catch_queries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/queryTestsCatch.dir/catch_queries.cpp.o -MF CMakeFiles/queryTestsCatch.dir/catch_queries.cpp.o.d -o CMakeFiles/queryTestsCatch.dir/catch_queries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_queries.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 30%] Linking CXX executable test-valgrind
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-valgrind.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now "CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o" -o test-valgrind  ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 30%] Built target test-valgrind
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake "--color="
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[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o -MF CMakeFiles/smiTest2.dir/test2.cpp.o.d -o CMakeFiles/smiTest2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test2.cpp
[ 30%] Linking CXX executable graphmolMemTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -o graphmolMemTest1  ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 30%] Built target graphmolMemTest1
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake "--color="
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[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o -MF CMakeFiles/smaTest1.dir/smatest.cpp.o.d -o CMakeFiles/smaTest1.dir/smatest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smatest.cpp
[ 30%] Linking CXX executable moliteratorTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/moliteratorTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/moliteratorTestsCatch.dir/catch_moliterators.cpp.o -o moliteratorTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 30%] Built target moliteratorTestsCatch
make  -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake "--color="
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[ 30%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -MF CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o.d -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp
[ 30%] Linking CXX executable queryTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/queryTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/queryTestsCatch.dir/catch_queries.cpp.o -o queryTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 30%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -MF CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o.d -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
[ 30%] Linking CXX executable smiTest2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/smiTest2.dir/test2.cpp.o -o smiTest2  ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake "--color="
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[ 30%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
[ 30%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -MF CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o.d -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
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[ 31%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o -MF CMakeFiles/testSubgraphs1.dir/test1.cpp.o.d -o CMakeFiles/testSubgraphs1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test1.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -MF CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o.d -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp
[ 31%] Linking CXX executable testSubgraphs1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSubgraphs1.dir/test1.cpp.o -o testSubgraphs1  ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o -MF CMakeFiles/testSubgraphs2.dir/test2.cpp.o.d -o CMakeFiles/testSubgraphs2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test2.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp:32:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 32%] Linking CXX executable smaTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/smaTest1.dir/smatest.cpp.o -o smaTest1  ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 32%] Built target smaTest1
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/DependInfo.cmake "--color="
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[ 32%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Subgraphs/CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o -MF CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/catch_tests.cpp
[ 32%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o -MF CMakeFiles/Fingerprints.dir/MACCS.cpp.o.d -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.cpp
[ 32%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
[ 32%] Linking CXX executable testSubgraphs2
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSubgraphs2.dir/test2.cpp.o -o testSubgraphs2  ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake "--color="
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[ 32%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
[ 32%] Linking CXX executable subgraphsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/subgraphsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/subgraphsCatch.dir/catch_tests.cpp.o -o subgraphsCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o -MF CMakeFiles/testPartialCharges.dir/test1.cpp.o.d -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/test1.cpp
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MHFP.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MHFP.cpp.o -MF CMakeFiles/Fingerprints.dir/MHFP.cpp.o.d -o CMakeFiles/Fingerprints.dir/MHFP.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp
[ 33%] Linking CXX executable testPartialCharges
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testPartialCharges.dir/test1.cpp.o -o testPartialCharges  ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target testPartialCharges
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -MF CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o.d -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp:32:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 33%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
[ 34%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 34%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogRunner.cpp
[ 35%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o  ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target rdPartialCharges
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:18:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:761,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:20:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'unsigned int RDKit::addOrder1Paths(PATH_LIST&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:54:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'unsigned int RDKit::addOrder1Paths(PATH_LIST&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:71:19:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:159:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:161:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:190:19:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:203:19:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const ROMol&, FragCatalog*, DOUBLE_INT_MAP&, const MatchVectType&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:208:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
[ 35%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/map:60,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::vector<int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void RDKit::{anonymous}::duplicateAdditionalOutputBit(RDKit::AdditionalOutput&, RDKit::AdditionalOutput&, OutputType, OutputType) [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:267:42:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::{anonymous}::duplicateAdditionalOutputBit(RDKit::AdditionalOutput&, RDKit::AdditionalOutput&, OutputType, OutputType) [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:267:42:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 35%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
[ 36%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -MF CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
[ 36%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 36%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -MF CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.cpp
[ 36%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = std::vector<std::pair<unsigned int, unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]',
    inlined from 'void RDKit::AtomPair::AtomPairAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:82:56:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::AtomPair::AtomPairAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:86:62:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::AtomPair::AtomPairAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:87:63:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = std::vector<std::pair<unsigned int, unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]',
    inlined from 'void RDKit::AtomPair::AtomPairAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:82:56:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::AtomPair::AtomPairAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:86:62:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::AtomPair::AtomPairAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:87:63:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 36%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp
[ 36%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -MF CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o.d -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
[ 36%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -MF CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o.d -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
[ 36%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -MF CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o.d -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp:33:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 36%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Built target FilterCatalog
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = std::vector<std::pair<unsigned int, unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]',
    inlined from 'void RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp:127:56:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp:133:56:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -MF CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o.d -o CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = std::vector<std::pair<unsigned int, unsigned int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]',
    inlined from 'void RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp:127:56:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp:133:56:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 37%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  739 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/12/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:10:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:761,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:20:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const RDKit::FragCatalog&, const RDKit::MatchVectType&, ExplicitBitVect*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:75:17:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const RDKit::FragCatalog&, const RDKit::MatchVectType&, ExplicitBitVect*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:83:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const RDKit::FragCatalog&, const RDKit::MatchVectType&, ExplicitBitVect*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:114:17:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const RDKit::FragCatalog&, const RDKit::MatchVectType&, ExplicitBitVect*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:141:26:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const RDKit::FragCatalog&, const RDKit::MatchVectType&, ExplicitBitVect*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:151:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = double; _Tp = int; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]',
    inlined from 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const RDKit::FragCatalog&, const RDKit::MatchVectType&, ExplicitBitVect*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:167:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 37%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2023.03.3 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2023.03.3 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target FragCatalog
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolCatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -MF CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o.d -o CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const std::string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:239:30:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::MolChemicalFeatureDef::setWeights(const std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:45:21,
    inlined from 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const std::string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:268:20:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 37%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2023.03.3 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2023.03.3 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target MolChemicalFeatures
make  -f Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCIPLabeler_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/CIPLabeler/Wrap/CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o -MF CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o.d -o CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Wrap/rdCIPLabeler.cpp
In file included from /usr/include/c++/12/bits/stl_tree.h:63,
                 from /usr/include/c++/12/map:60,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:11:
/usr/include/c++/12/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2059 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::vector<int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = std::vector<std::vector<int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]',
    inlined from 'void RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:95:51:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Tp = unsigned int]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'void RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:102:24:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:103:28:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long unsigned int; _Tp = std::vector<std::vector<int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]',
    inlined from 'void RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:95:51:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Tp = unsigned int]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'void RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:102:24:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:103:28:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -MF CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o.d -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Wrap/rdCIPLabeler.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o  ../../../../lib/libRDKitShapeHelpers.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target rdShapeHelpers
[ 38%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -MF CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o.d -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdCIPLabeler.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCIPLabeler.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdCIPLabeler.so CMakeFiles/rdCIPLabeler.dir/rdCIPLabeler.cpp.o  ../../../../lib/libRDKitCIPLabeler.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target rdCIPLabeler
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -MF CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o.d -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o  ../../../../lib/libRDKitMolCatalog.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolInterchange_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -MF CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o.d -o CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv<OutputType>::updateAdditionalOutput(RDKit::AdditionalOutput*, size_t) const [with OutputType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:56:56:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake "--color="
[ 38%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2023.03.3 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/MHFP.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[ 38%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o -MF CMakeFiles/testSLNParse.dir/test.cpp.o.d -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/test.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target Fingerprints
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake "--color="
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -MF CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o.d -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<int>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2023.03.3 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2023.03.3 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target ReducedGraphs
make  -f Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/build.make Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/build.make Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations && /usr/bin/c++ -DAbbreviations_EXPORTS -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_ABBREVIATIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o -MF CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o.d -o CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Abbreviations.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp:35:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolInterchange.so CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o  ../../../../lib/libRDKitMolInterchange.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target rdMolInterchange
[ 38%] Building CXX object Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations && /usr/bin/c++ -DAbbreviations_EXPORTS -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_ABBREVIATIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Abbreviations/CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o -MF CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o.d -o CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/AbbreviationsUtils.cpp
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o  ../../../../lib/libRDKitSLNParse.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target rdSLNParse
make  -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -MF CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o.d -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Abbreviations.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Abbreviations.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Abbreviations.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/AbbreviationsUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = unsigned int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, unsigned int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:298:14,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = unsigned int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'RDKit::ROMol* RDKit::Abbreviations::Utils::detail::createAbbreviationMol(const std::string&, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/AbbreviationsUtils.cpp:181:13:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 38%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -MF CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o.d -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp
[ 38%] Linking CXX shared library ../../../lib/libRDKitAbbreviations.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Abbreviations.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitAbbreviations.so.1 -o ../../../lib/libRDKitAbbreviations.so.1.2023.03.3 CMakeFiles/Abbreviations.dir/Abbreviations.cpp.o CMakeFiles/Abbreviations.dir/AbbreviationsUtils.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAbbreviations.so.1.2023.03.3 ../../../lib/libRDKitAbbreviations.so.1 ../../../lib/libRDKitAbbreviations.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target Abbreviations
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o -MF CMakeFiles/ForceField.dir/ForceField.cpp.o.d -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]',
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:261:32:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]',
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:285:32:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]',
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:364:30:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 38%] Linking CXX executable testOptimizer
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/testOptimizer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -o testOptimizer  ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target testOptimizer
make  -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -MF CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o.d -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MolAlign::alignMolConformers(RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDNumeric::DoubleVector*, bool, unsigned int, std::vector<double>*)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp:309:27:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MolAlign::alignMolConformers(RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDNumeric::DoubleVector*, bool, unsigned int, std::vector<double>*)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp:327:27:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'double ForceFields::ForceField::calcEnergy(std::vector<double>*) const' at /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:316:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:17:
In copy constructor 'RDKit::Snapshot::Snapshot(const RDKit::Snapshot&)',
    inlined from 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = RDKit::Snapshot; _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot]' at /usr/include/c++/12/bits/new_allocator.h:175:4,
    inlined from 'static void std::allocator_traits<std::allocator<_Tp1> >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = RDKit::Snapshot; _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot]' at /usr/include/c++/12/bits/alloc_traits.h:516:17,
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]' at /usr/include/c++/12/bits/stl_vector.h:1281:30,
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:261:32,
    inlined from 'int ForceFields::ForceField::minimize(unsigned int, RDKit::SnapshotVect*, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:289:24:
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:26:31: warning: 'finalForce' may be used uninitialized [-Wmaybe-uninitialized]
   26 | class RDKIT_TRAJECTORY_EXPORT Snapshot {
      |                               ^~~~~~~~
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp: In member function 'int ForceFields::ForceField::minimize(unsigned int, RDKit::SnapshotVect*, unsigned int, double, double)':
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:281:10: note: 'finalForce' was declared here
  281 |   double finalForce;
      |          ^~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]',
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:261:32,
    inlined from 'int ForceFields::ForceField::minimize(unsigned int, RDKit::SnapshotVect*, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:289:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]',
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:285:32,
    inlined from 'int ForceFields::ForceField::minimize(unsigned int, RDKit::SnapshotVect*, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:289:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]',
    inlined from 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]' at /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:364:30,
    inlined from 'int ForceFields::ForceField::minimize(unsigned int, RDKit::SnapshotVect*, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:289:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 38%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolAlign.so.1 -o ../../../lib/libRDKitMolAlign.so.1.2023.03.3 CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target MolAlign
[ 38%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -MF CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.cpp
make  -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -MF CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o.d -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -MF CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.cpp
[ 39%] Linking CXX executable testSLNParse
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSLNParse.dir/test.cpp.o -o testSLNParse  ../../../lib/libRDKitSLNParse.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target testSLNParse
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp:32:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -MF CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.cpp
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 39%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -MF CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o.d -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -MF CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o.d -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -MF CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp:31:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -MF CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 39%] Linking CXX executable graphmolqueryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -o graphmolqueryTest  ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target graphmolqueryTest
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -MF CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.cpp
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMHFPFingerprint_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o -MF CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o.d -o CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/MHFPWrapper.cpp
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -MF CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/MHFPWrapper.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -MF CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.cpp
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o
[ 39%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -MF CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFingerprintGenerator.so CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target rdFingerprintGenerator
[ 40%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o -MF CMakeFiles/ForceField.dir/UFF/Params.cpp.o.d -o CMakeFiles/ForceField.dir/UFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.cpp
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdMHFPFingerprint.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMHFPFingerprint.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMHFPFingerprint.so CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target rdMHFPFingerprint
[ 40%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.cpp
[ 40%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.cpp
[ 40%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.cpp
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o -MF CMakeFiles/testReducedGraphs.dir/test1.cpp.o.d -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/test1.cpp
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.cpp: In function 'std::pair<double, double> ForceFields::MMFF::Utils::calcStbnForceConstants(const ForceFields::MMFF::MMFFStbn*)':
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.cpp:27:35: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
   27 |     const MMFFStbn *mmffStbnParams) {
      |                                   ^
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.cpp
[ 41%] Linking CXX executable testReducedGraphs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testReducedGraphs.dir/test1.cpp.o -o testReducedGraphs  ../../../lib/libRDKitReducedGraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target testReducedGraphs
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.cpp
[ 41%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.cpp
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.cpp
make  -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake "--color="
[ 42%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -MF CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o.d -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -MF CMakeFiles/ForceField.dir/MMFF/Params.cpp.o.d -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o  ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 42%] Built target rdfiltercatalog
make  -f Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/build.make Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAbbreviations_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Abbreviations/Wrap/CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o -MF CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o.d -o CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Wrap/rdAbbreviations.cpp
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o  ../../../../lib/libRDKitReducedGraphs.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdReducedGraphs
[ 42%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -MF CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o.d -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
make  -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o -MF CMakeFiles/Depictor.dir/RDDepictor.cpp.o.d -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:17,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFPBCI&}; _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFPBCI>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFChg&}; _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFChg>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFBond&}; _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFBond>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFHerschbachLaurie&}; _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFHerschbachLaurie>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFCovRadPauEle&}; _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFCovRadPauEle>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFAngle&}; _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFAngle>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFStbn&}; _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFStbn>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFOop&}; _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFOop>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFTor&}; _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFTor>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFVdW&}; _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFVdW>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]',
    inlined from 'ForceFields::MMFF::MMFFOopCollection::MMFFOopCollection(bool, std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:4984:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]',
    inlined from 'ForceFields::MMFF::MMFFChgCollection::MMFFChgCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:772:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]',
    inlined from 'ForceFields::MMFF::MMFFBondCollection::MMFFBondCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:1334:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]',
    inlined from 'ForceFields::MMFF::MMFFBndkCollection::MMFFBndkCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:1885:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Wrap/rdAbbreviations.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]',
    inlined from 'ForceFields::MMFF::MMFFHerschbachLaurieCollection::MMFFHerschbachLaurieCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:1999:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]',
    inlined from 'ForceFields::MMFF::MMFFStbnCollection::MMFFStbnCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:4565:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]',
    inlined from 'ForceFields::MMFF::MMFFAngleCollection::MMFFAngleCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:2149:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]',
    inlined from 'ForceFields::MMFF::MMFFCovRadPauEleCollection::MMFFCovRadPauEleCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:2066:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]',
    inlined from 'ForceFields::MMFF::MMFFTorCollection::MMFFTorCollection(bool, std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:5308:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]',
    inlined from 'ForceFields::MMFF::MMFFPBCICollection::MMFFPBCICollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:616:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]',
    inlined from 'ForceFields::MMFF::MMFFVdWCollection::MMFFVdWCollection(std::string)' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:8295:27:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 42%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2023.03.3 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o  ../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2023.03.3 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target ForceField
[ 42%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -MF CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o.d -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o  ../../../../lib/libRDKitMolChemicalFeatures.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdMolChemicalFeatures
[ 43%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o -MF CMakeFiles/Depictor.dir/DepictUtils.cpp.o.d -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDDepict::copyCoordinate(RDKit::ROMol&, std::__cxx11::list<EmbeddedFrag>&, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:509:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDKit::CoordGen::addCoords(T&, const CoordGenParams*) [with T = RDKit::ROMol]' at /<<PKGBUILDDIR>>/External/CoordGen/CoordGen.h:178:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/list:63,
                 from /usr/include/boost/detail/container_fwd.hpp:92,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:761,
                 from /usr/include/boost/functional/hash/hash.hpp:6,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:53,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:23:
/usr/include/c++/12/bits/stl_list.h: In member function 'void std::__cxx11::list<_Tp, _Alloc>::_M_insert(iterator, _Args&& ...) [with _Args = {const RDDepict::EmbeddedFrag&}; _Tp = RDDepict::EmbeddedFrag; _Alloc = std::allocator<RDDepict::EmbeddedFrag>]':
/usr/include/c++/12/bits/stl_list.h:2003:8: note: parameter passing for argument of type 'std::__cxx11::list<RDDepict::EmbeddedFrag>::iterator' changed in GCC 7.1
 2003 |        _M_insert(iterator __position, _Args&&... __args)
      |        ^~~~~~~~~
In member function 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDDepict::EmbeddedFrag; _Alloc = std::allocator<RDDepict::EmbeddedFrag>]',
    inlined from 'void RDDepict::DepictorLocal::embedFusedSystems(const RDKit::ROMol&, const RDKit::VECT_INT_VECT&, std::__cxx11::list<RDDepict::EmbeddedFrag>&, const RDGeom::INT_POINT2D_MAP*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:286:21:
/usr/include/c++/12/bits/stl_list.h:1306:24: note: parameter passing for argument of type 'std::_List_iterator<RDDepict::EmbeddedFrag>' changed in GCC 7.1
 1306 |       { this->_M_insert(end(), __x); }
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDDepict::EmbeddedFrag; _Alloc = std::allocator<RDDepict::EmbeddedFrag>]',
    inlined from 'void RDDepict::DepictorLocal::embedCisTransSystems(const RDKit::ROMol&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:318:23:
/usr/include/c++/12/bits/stl_list.h:1306:24: note: parameter passing for argument of type 'std::_List_iterator<RDDepict::EmbeddedFrag>' changed in GCC 7.1
 1306 |       { this->_M_insert(end(), __x); }
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDDepict::EmbeddedFrag; _Alloc = std::allocator<RDDepict::EmbeddedFrag>]',
    inlined from 'void RDDepict::computeInitialCoords(RDKit::ROMol&, const RDGeom::INT_POINT2D_MAP*, std::__cxx11::list<EmbeddedFrag>&, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:439:21:
/usr/include/c++/12/bits/stl_list.h:1306:24: note: parameter passing for argument of type 'std::_List_iterator<RDDepict::EmbeddedFrag>' changed in GCC 7.1
 1306 |       { this->_M_insert(end(), __x); }
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::__cxx11::list<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDDepict::EmbeddedFrag; _Alloc = std::allocator<RDDepict::EmbeddedFrag>]',
    inlined from 'void RDDepict::computeInitialCoords(RDKit::ROMol&, const RDGeom::INT_POINT2D_MAP*, std::__cxx11::list<EmbeddedFrag>&, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:487:23:
/usr/include/c++/12/bits/stl_list.h:1306:24: note: parameter passing for argument of type 'std::_List_iterator<RDDepict::EmbeddedFrag>' changed in GCC 7.1
 1306 |       { this->_M_insert(end(), __x); }
      |         ~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const Compute2DCoordParameters&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:651:22:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 43%] Linking CXX shared module ../../../../rdkit/Chem/rdAbbreviations.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAbbreviations.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdAbbreviations.so CMakeFiles/rdAbbreviations.dir/rdAbbreviations.cpp.o  ../../../../lib/libRDKitAbbreviations.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void RDDepict::straightenDepiction(RDKit::ROMol&, int, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:944:35:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 43%] Built target rdAbbreviations
make  -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCoordGen_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -MF CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o.d -o CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {int&, RDDepict::EmbeddedAtom&}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<unsigned int&&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/map:61:
/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1352:16:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1356:16:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::initFromRingCoords(const RDKit::INT_VECT&, const RDGeom::INT_POINT2D_MAP&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:673:20:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::initFromRingCoords(const RDKit::INT_VECT&, const RDGeom::INT_POINT2D_MAP&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:675:16:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::initFromRingCoords(const RDKit::INT_VECT&, const RDGeom::INT_POINT2D_MAP&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:679:16:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::flipAboutBond(unsigned int, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1632:29:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/Templates.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/Templates.cpp.o -MF CMakeFiles/Depictor.dir/Templates.cpp.o.d -o CMakeFiles/Depictor.dir/Templates.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Templates.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'RDDepict::INT_PAIR_VECT RDDepict::findBondsPairsToPermuteDeg4(const RDGeom::Point2D&, const RDKit::INT_VECT&, const VECT_C_POINT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:382:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:117:38:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:117:59:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:118:40:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:318:37:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:328:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:329:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:332:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:334:37:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:334:57:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:333:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:338:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:339:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:341:36:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:341:55:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:341:74:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::setupAttachmentPoints()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:340:19:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:605:34:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:606:34:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:613:33:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:628:35:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:629:35:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1515:32:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1515:53:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1516:34:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1516:55:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1527:38:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1527:59:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:503:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:516:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:517:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:518:27:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:519:27:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:521:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:255:15:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:260:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:266:15:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:266:43:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:272:20:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:281:19:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::ROMol*, const RDGeom::INT_POINT2D_MAP&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:96:17:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'RDDepict::EmbeddedFrag::EmbeddedFrag(unsigned int, const RDKit::ROMol*)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:55:15:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:571:36:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:576:35:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:577:41:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:589:27:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:590:33:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:591:39:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:595:29:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:688:19:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:696:23:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:697:27:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:698:25:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:699:34:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:700:25:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:701:34:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:703:34:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:732:39:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:745:17:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:749:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:753:30:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:772:17:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:802:15:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::addNonRingAtom(unsigned int, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:726:58:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1029:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1030:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1031:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1034:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1036:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1037:21:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1091:29:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1130:17:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1926:44:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1927:43:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:1935:23:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = unsigned int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, unsigned int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:298:14,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = unsigned int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'bool RDDepict::EmbeddedFrag::matchToTemplate(const RDKit::INT_VECT&, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:366:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {int&, RDDepict::EmbeddedAtom&}; _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]',
    inlined from 'std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Tp>, std::_Select1st<std::pair<const _Key, _Tp> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Tp> >::other>::iterator, bool> std::map<_Key, _Tp, _Compare, _Alloc>::emplace(_Args&& ...) [with _Args = {int&, RDDepict::EmbeddedAtom&}; _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]' at /usr/include/c++/12/bits/stl_map.h:599:22,
    inlined from 'bool RDDepict::EmbeddedFrag::matchToTemplate(const RDKit::INT_VECT&, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:415:21:
/usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type 'std::map<unsigned int, RDDepict::EmbeddedAtom>::const_iterator' {aka 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator'} changed in GCC 7.1
  638 |           return _M_t._M_emplace_hint_unique(__pos,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
  639 |                                              std::forward<_Args>(__args)...);
      |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
[ 43%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDepictor.so.1 -o ../../../lib/libRDKitDepictor.so.1.2023.03.3 CMakeFiles/Depictor.dir/RDDepictor.cpp.o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o CMakeFiles/Depictor.dir/DepictUtils.cpp.o CMakeFiles/Depictor.dir/Templates.cpp.o  ../../../lib/libRDKitMolAlign.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1 ../../../lib/libRDKitDepictor.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Built target Depictor
[ 43%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -MF CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o.d -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'unsigned int RDKit::CoordGen::addCoords(T&, const CoordGenParams*) [with T = RDKit::ROMol]' at /<<PKGBUILDDIR>>/External/CoordGen/CoordGen.h:174:15:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'unsigned int RDKit::CoordGen::addCoords(T&, const CoordGenParams*) [with T = RDKit::ROMol]' at /<<PKGBUILDDIR>>/External/CoordGen/CoordGen.h:178:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -MF CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o.d -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
[ 44%] Linking CXX shared module ../../../rdkit/Chem/rdCoordGen.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCoordGen.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdCoordGen.so CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o  /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Built target rdCoordGen
[ 44%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -MF CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o.d -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::details::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:43:52:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void RDKit::details::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:49:28:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'RDKit::ROMol* RDKit::combineMols(const ROMol&, const ROMol&, RDGeom::Point3D)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:855:28:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 44%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'RDKit::ROMol* RDKit::replaceCore(const ROMol&, const ROMol&, const MatchVectType&, bool, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:735:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 44%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp: In function 'void RDKit::MMFF::Tools::addStretchBend(const RDKit::ROMol&, RDKit::MMFF::MMFFMolProperties*, ForceFields::ForceField*)':
/<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp:419:68: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  419 |                 MMFF::Utils::calcStbnForceConstants(&mmffStbnParams);
      |                                                                    ^
[ 44%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o  ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Built target rdDepictor
[ 45%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -MF CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o.d -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:534:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:535:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'std::unique_ptr<RDKit::ROMol> RDKit::molzip(std::vector<boost::shared_ptr<ROMol> >&, const MolzipParams&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:1105:60:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'std::unique_ptr<RDKit::ROMol> RDKit::molzip(std::vector<boost::shared_ptr<ROMol> >&, const MolzipParams&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:1122:28:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o  ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Built target ChemTransforms
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make  -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake "--color="
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o
[ 46%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o -MF CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o.d -o CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -MF CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp
[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o -MF CMakeFiles/rdchem.dir/rdchem.cpp.o.d -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdchem.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'ForceFields::CrystalFF::ExpTorsionAngleCollection::ExpTorsionAngleCollection(const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp:121:26:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Built target ForceFieldHelpers
[ 46%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/MolFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdchem.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::{anonymous}::ParseMol2AtomBlock(std::istream*, RDKit::RWMol*, unsigned int, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:731:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::{anonymous}::ParseMol2AtomBlock(std::istream*, RDKit::RWMol*, unsigned int, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:751:42:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::{anonymous}::ParseMol2AtomBlock(std::istream*, RDKit::RWMol*, unsigned int, RDKit::INT_VECT&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:754:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -MF CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o.d -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(const typename _Container::value_type&) [with _Container = std::vector<double>]' at /usr/include/c++/12/bits/stl_iterator.h:735:22,
    inlined from 'static _OI std::__copy_move<_IsMove, _IsSimple, _Category>::__copy_m(_II, _II, _OI) [with _II = std::istream_iterator<double, char, std::char_traits<char>, int>; _OI = std::back_insert_iterator<std::vector<double> >; bool _IsMove = false; bool _IsSimple = false; _Category = std::input_iterator_tag]' at /usr/include/c++/12/bits/stl_algobase.h:353:16,
    inlined from '_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = false; _II = istream_iterator<double, char, char_traits<char>, int>; _OI = back_insert_iterator<vector<double> >]' at /usr/include/c++/12/bits/stl_algobase.h:495:30,
    inlined from '_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = false; _II = istream_iterator<double, char, char_traits<char>, int>; _OI = back_insert_iterator<vector<double> >]' at /usr/include/c++/12/bits/stl_algobase.h:522:42,
    inlined from '_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = false; _II = istream_iterator<double, char, char_traits<char>, int>; _OI = back_insert_iterator<vector<double> >]' at /usr/include/c++/12/bits/stl_algobase.h:529:31,
    inlined from '_OI std::copy(_II, _II, _OI) [with _II = istream_iterator<double, char, char_traits<char>, int>; _OI = back_insert_iterator<vector<double> >]' at /usr/include/c++/12/bits/stl_algobase.h:620:7,
    inlined from 'std::vector<T> RDKit::{anonymous}::to_vec(const std::string&) [with T = double]' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.cpp:116:12,
    inlined from 'bool RDKit::{anonymous}::parse_fragment(RDKit::RWMol&, boost::property_tree::ptree&, std::map<unsigned int, RDKit::Atom*>&, int&, int)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.cpp:255:41:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'std::__detail::__unique_ptr_t<_Tp> std::make_unique(_Args&& ...) [with _Tp = RDKit::Conformer; _Args = {unsigned int}]' at /usr/include/c++/12/bits/unique_ptr.h:1065:30,
    inlined from 'std::vector<std::unique_ptr<RDKit::RWMol> > RDKit::CDXMLDataStreamToMols(std::istream&, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.cpp:574:73:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'std::vector<std::unique_ptr<RDKit::RWMol> > RDKit::CDXMLDataStreamToMols(std::istream&, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.cpp:593:33:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -MF CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o.d -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/numeric/conversion/converter_policies.hpp:19,
                 from /usr/include/boost/numeric/conversion/converter.hpp:14,
                 from /usr/include/boost/numeric/conversion/cast.hpp:33,
                 from /usr/include/boost/lexical_cast/detail/converter_numeric.hpp:36,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:43,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o -MF CMakeFiles/rdchem.dir/Table.cpp.o.d -o CMakeFiles/rdchem.dir/Table.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Table.cpp
[ 46%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -MF CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o.d -o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.cpp
[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o -MF CMakeFiles/rdchem.dir/Atom.cpp.o.d -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp
[ 46%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -MF CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o.d -o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Table.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 46%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2023.03.3 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o  ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../lib/libRDKitForceField.so.1.2023.03.3 ../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Built target DistGeometry
make  -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o -MF CMakeFiles/rdForceField.dir/ForceField.cpp.o.d -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp
In file included from /usr/include/c++/12/vector:63,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::atomicData*, vector<RDKit::atomicData> >; _ForwardIterator = RDKit::atomicData*]':
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
  113 |     __do_uninit_copy(_InputIterator __first, _InputIterator __last,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >; _ForwardIterator = RDKit::atomicData*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::atomicData*, vector<RDKit::atomicData> >; _ForwardIterator = RDKit::atomicData*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::atomicData*, vector<RDKit::atomicData> >; _ForwardIterator = RDKit::atomicData*; _Tp = RDKit::atomicData]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]' at /usr/include/c++/12/bits/stl_vector.h:601:31,
    inlined from 'RDKit::PeriodicTable::PeriodicTable(const RDKit::PeriodicTable&)' at /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:32:29,
    inlined from 'boost::python::objects::value_holder<Value>::value_holder(PyObject*, A0) [with A0 = boost::reference_wrapper<const RDKit::PeriodicTable>; Value = RDKit::PeriodicTable]' at /usr/include/boost/python/object/value_holder.hpp:131:11,
    inlined from 'static Holder* boost::python::objects::make_instance<T, Holder>::construct(void*, PyObject*, boost::reference_wrapper<const T>) [with T = RDKit::PeriodicTable; Holder = boost::python::objects::value_holder<RDKit::PeriodicTable>]' at /usr/include/boost/python/object/make_instance.hpp:72:16,
    inlined from 'static PyObject* boost::python::objects::make_instance_impl<T, Holder, Derived>::execute(Arg&) [with Arg = const boost::reference_wrapper<const RDKit::PeriodicTable>; T = RDKit::PeriodicTable; Holder = boost::python::objects::value_holder<RDKit::PeriodicTable>; Derived = boost::python::objects::make_instance<RDKit::PeriodicTable, boost::python::objects::value_holder<RDKit::PeriodicTable> >]' at /usr/include/boost/python/object/make_instance.hpp:46:31,
    inlined from 'static PyObject* boost::python::objects::class_cref_wrapper<Src, MakeInstance>::convert(const Src&) [with Src = RDKit::PeriodicTable; MakeInstance = boost::python::objects::make_instance<RDKit::PeriodicTable, boost::python::objects::value_holder<RDKit::PeriodicTable> >]' at /usr/include/boost/python/object/class_wrapper.hpp:29:37,
    inlined from 'static PyObject* boost::python::converter::as_to_python_function<T, ToPython>::convert(const void*) [with T = RDKit::PeriodicTable; ToPython = boost::python::objects::class_cref_wrapper<RDKit::PeriodicTable, boost::python::objects::make_instance<RDKit::PeriodicTable, boost::python::objects::value_holder<RDKit::PeriodicTable> > >]' at /usr/include/boost/python/converter/as_to_python_function.hpp:40:33:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 47%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -MF CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o.d -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/testDistGeom.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 48%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -MF CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o.d -o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp
[ 48%] Linking CXX executable testDistGeom
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -o testDistGeom  ../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../lib/libRDKitForceField.so.1.2023.03.3 ../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target testDistGeom
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o -MF CMakeFiles/rdchem.dir/Bond.cpp.o.d -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o -MF CMakeFiles/DistGeom.dir/DistGeom.cpp.o.d -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/Wrap/DistGeom.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<T> RDKit::SGroupParsing::ParseV3000Array(std::stringstream&, int, bool) [with T = double]' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp:957:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 48%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o
[ 48%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -MF CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o.d -o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o  ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/DistGeom/Wrap/DistGeom.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target rdForceField
[ 48%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -MF CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o.d -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp
[ 48%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target DistGeom
make  -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -MF CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o.d -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DO3AAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolAlign/CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o -MF CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o.d -o CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o -MF CMakeFiles/rdchem.dir/Mol.cpp.o.d -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -MF CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
                 from /usr/include/c++/12/algorithm:61,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Distance = int; _Tp = pair<unsigned int, RDGeom::Point3D>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
[ 49%] Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o  ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Built target rdForceFieldHelpers
[ 50%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o -MF CMakeFiles/rdchem.dir/Conformer.cpp.o.d -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp
[ 50%] Linking CXX shared library ../../../lib/libRDKitO3AAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/O3AAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitO3AAlign.so.1 -o ../../../lib/libRDKitO3AAlign.so.1.2023.03.3 CMakeFiles/O3AAlign.dir/O3AAlignMolecules.cpp.o  ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitO3AAlign.so.1.2023.03.3 ../../../lib/libRDKitO3AAlign.so.1 ../../../lib/libRDKitO3AAlign.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 50%] Built target O3AAlign
[ 50%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = Rankers::<lambda(const auto:31&, const auto:32&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'unsigned int RDKit::{anonymous}::getAtomParityFlag(const RDKit::Atom*, const RDKit::Conformer*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:515:12,
    inlined from 'void RDKit::GetMolFileAtomProperties(const Atom*, const Conformer*, int&, int&, unsigned int&, double&, double&, double&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:578:37:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::<lambda(const auto:31&, const auto:32&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<unsigned int, RDGeom::Point3D>*, vector<pair<unsigned int, RDGeom::Point3D> > >; _Compare = Rankers::<lambda(const auto:31&, const auto:32&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'unsigned int RDKit::{anonymous}::getAtomParityFlag(const RDKit::Atom*, const RDKit::Conformer*)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:515:12,
    inlined from 'void RDKit::GetMolFileAtomProperties(const Atom*, const Conformer*, int&, int&, unsigned int&, double&, double&, double&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:578:37:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o -MF CMakeFiles/rdchem.dir/RingInfo.cpp.o.d -o CMakeFiles/rdchem.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/RingInfo.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/RingInfo.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearComputedProps() const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:153:25,
    inlined from 'void RDKit::MolClearComputedProps(const RDOb&) [with RDOb = Conformer]' at /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/props.hpp:157:25:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearProp(const std::string&) const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:145:21,
    inlined from 'void RDKit::MolClearProp(const RDOb&, const char*) [with RDOb = Conformer]' at /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/props.hpp:152:16:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'boost::python::objects::pointer_holder<Pointer, Value>::pointer_holder(PyObject*, A0) [with A0 = unsigned int; Pointer = boost::shared_ptr<RDKit::Conformer>; Value = RDKit::Conformer]' at /usr/include/boost/python/object/pointer_holder.hpp:195:15,
    inlined from 'static void boost::python::objects::make_holder<1>::apply<Holder, ArgList>::execute(PyObject*, t0) [with Holder = boost::python::objects::pointer_holder<boost::shared_ptr<RDKit::Conformer>, RDKit::Conformer>; ArgList = boost::mpl::vector1<unsigned int>]' at /usr/include/boost/python/object/make_holder.hpp:94:18:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake "--color="
[ 50%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o -MF CMakeFiles/FileParsers.dir/SDWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDWriter.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 50%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -MF CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o.d -o CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'unsigned int RDKit::SDMolSupplier::length()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:261:29:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'virtual RDKit::ROMol* RDKit::SDMolSupplier::next()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:168:23:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'void RDKit::SDMolSupplier::moveTo(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:221:29:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -MF CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o.d -o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp
[ 50%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
[ 50%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o -MF CMakeFiles/rdchem.dir/EditableMol.cpp.o.d -o CMakeFiles/rdchem.dir/EditableMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/EditableMol.cpp
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -MF CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesWriter.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {int&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::DGeomHelpers::detail::embedHelper_(int, int, EmbedArgs*, RDKit::DGeomHelpers::EmbedParameters*)' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:1271:27:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/EditableMol.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'void RDKit::SmilesMolSupplier::moveTo(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:400:28:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::DGeomHelpers::EmbedMultipleConfs(RDKit::ROMol&, RDKit::INT_VECT&, unsigned int, EmbedParameters&)' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:1359:55:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {int&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'unsigned int RDKit::SmilesMolSupplier::length()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:518:28:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/EmbedderUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/EmbedderUtils.cpp.o -MF CMakeFiles/DistGeomHelpers.dir/EmbedderUtils.cpp.o.d -o CMakeFiles/DistGeomHelpers.dir/EmbedderUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/EmbedderUtils.cpp
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -MF CMakeFiles/FileParsers.dir/TDTWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTWriter.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/EmbedderUtils.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -MF CMakeFiles/rdchem.dir/MonomerInfo.cpp.o.d -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MonomerInfo.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::TDTParseUtils::ParseNumberList(std::string, std::vector<T>&, std::istream*) [with T = double]' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:52:22:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -MF CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o.d -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MonomerInfo.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o CMakeFiles/DistGeomHelpers.dir/EmbedderUtils.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target DistGeomHelpers
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o -MF CMakeFiles/rdchem.dir/MolBundle.cpp.o.d -o CMakeFiles/rdchem.dir/MolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolBundle.cpp
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/TplFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp:15:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolBundle.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -MF CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileWriter.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/numeric/conversion/converter_policies.hpp:19,
                 from /usr/include/boost/numeric/conversion/converter.hpp:14,
                 from /usr/include/boost/numeric/conversion/cast.hpp:33,
                 from /usr/include/boost/lexical_cast/detail/converter_numeric.hpp:36,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:43,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o -MF CMakeFiles/FileParsers.dir/PDBParser.cpp.o.d -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/StereoGroup.cpp.o -MF CMakeFiles/rdchem.dir/StereoGroup.cpp.o.d -o CMakeFiles/rdchem.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/StereoGroup.cpp
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o -MF CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o.d -o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -MF CMakeFiles/FileParsers.dir/PDBWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBWriter.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/StereoGroup.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/numeric/conversion/converter_policies.hpp:19,
                 from /usr/include/boost/numeric/conversion/converter.hpp:14,
                 from /usr/include/boost/numeric/conversion/cast.hpp:33,
                 from /usr/include/boost/lexical_cast/detail/converter_numeric.hpp:36,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:43,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBSupplier.cpp
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CMLWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/CMLWriter.cpp.o -MF CMakeFiles/FileParsers.dir/CMLWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/CMLWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CMLWriter.cpp
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Chirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Chirality.cpp.o -MF CMakeFiles/rdchem.dir/Chirality.cpp.o.d -o CMakeFiles/rdchem.dir/Chirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Chirality.cpp
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -MF CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileWriter.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:63:
/usr/include/c++/12/bits/stl_uninitialized.h: In function '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]':
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  113 |     __do_uninit_copy(_InputIterator __first, _InputIterator __last,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_uninitialized.h:113:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::pointer std::vector<_Tp, _Alloc>::_M_allocate_and_copy(size_type, _ForwardIterator, _ForwardIterator) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1617:35,
    inlined from 'std::vector<_Tp, _Alloc>& std::vector<_Tp, _Alloc>::operator=(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/vector.tcc:232:44,
    inlined from 'RDKit::Dict& RDKit::Dict::operator=(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:114:21,
    inlined from 'RDKit::RDProps& RDKit::RDProps::operator=(const RDKit::RDProps&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:28:19,
    inlined from 'RDKit::SubstanceGroup& RDKit::SubstanceGroup::operator=(const RDKit::SubstanceGroup&)' at /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:100:19:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; bool _TrivialValueTypes = false]',
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, vector<RDKit::Dict::Pair> >; _ForwardIterator = RDKit::Dict::Pair*; _Tp = RDKit::Dict::Pair]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'std::vector<_Tp, _Alloc>::vector(const std::vector<_Tp, _Alloc>&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:601:31,
    inlined from 'RDKit::Dict::Dict(const RDKit::Dict&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:51:29,
    inlined from 'RDKit::RDProps::RDProps(const RDKit::RDProps&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:23:33,
    inlined from 'RDKit::SubstanceGroup::SubstanceGroup(const RDKit::SubstanceGroup&)' at /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:99:3:
/usr/include/c++/12/bits/stl_uninitialized.h:137:39: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  137 |         { return std::__do_uninit_copy(__first, __last, __result); }
      |                  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Chirality.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o -MF CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o.d -o CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileParser.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp
[ 54%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o CMakeFiles/rdchem.dir/StereoGroup.cpp.o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o CMakeFiles/rdchem.dir/Chirality.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeWriter.cpp.o -MF CMakeFiles/FileParsers.dir/MaeWriter.cpp.o.d -o CMakeFiles/FileParsers.dir/MaeWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeWriter.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 54%] Built target rdchem
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -MF CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o.d -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/numeric/conversion/converter_policies.hpp:19,
                 from /usr/include/boost/numeric/conversion/converter.hpp:14,
                 from /usr/include/boost/numeric/conversion/cast.hpp:33,
                 from /usr/include/boost/lexical_cast/detail/converter_numeric.hpp:36,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:43,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileParser.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -MF CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o.d -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'RDKit::RWMol* RDKit::XYZDataStreamToMol(std::istream&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileParser.cpp:126:45:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'RDKit::RWMol* RDKit::XYZDataStreamToMol(std::istream&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileParser.cpp:138:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -MF CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o.d -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeWriter.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:15:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearComputedProps() const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:153:25,
    inlined from 'void RDKit::{anonymous}::copyProperties(const RDKit::RDProps&, const RDKit::STR_VECT&, unsigned int, std::function<void(const std::__cxx11::basic_string<char>&, unsigned int, bool)>, std::function<void(const std::__cxx11::basic_string<char>&, unsigned int, int)>, std::function<void(const std::__cxx11::basic_string<char>&, unsigned int, double)>, std::function<void(const std::__cxx11::basic_string<char>&, unsigned int, const std::__cxx11::basic_string<char>&)>)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeWriter.cpp:141:28:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearProp(const std::string&) const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:145:21:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::{anonymous}::addAtoms(const schrodinger::mae::IndexedBlock&, RDKit::RWMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:322:40,
    inlined from 'void RDKit::{anonymous}::build_mol(RDKit::RWMol&, schrodinger::mae::Block&, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:382:11,
    inlined from 'virtual RDKit::ROMol* RDKit::MaeMolSupplier::next()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:512:14:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::{anonymous}::addAtoms(const schrodinger::mae::IndexedBlock&, RDKit::RWMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:339:21,
    inlined from 'void RDKit::{anonymous}::build_mol(RDKit::RWMol&, schrodinger::mae::Block&, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:382:11,
    inlined from 'virtual RDKit::ROMol* RDKit::MaeMolSupplier::next()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:512:14:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o -MF CMakeFiles/FileParsers.dir/SVGParser.cpp.o.d -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PNGParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PNGParser.cpp.o -MF CMakeFiles/FileParsers.dir/PNGParser.cpp.o.d -o CMakeFiles/FileParsers.dir/PNGParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PNGParser.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedMolSupplier.cpp
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o -MF CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o.d -o CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSDMolSupplier.cpp
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::{anonymous}::ptreeToMol(RDKit::RWMol*, const boost::property_tree::ptree&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:46:20,
    inlined from 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:88:17:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void RDKit::{anonymous}::ptreeToMol(RDKit::RWMol*, const boost::property_tree::ptree&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:68:48,
    inlined from 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:88:17:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::{anonymous}::ptreeToMol(RDKit::RWMol*, const boost::property_tree::ptree&)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:70:21,
    inlined from 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:88:17:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedMolSupplier.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedMolSupplier.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSDMolSupplier.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSDMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 55%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2023.03.3 CMakeFiles/FileParsers.dir/CDXMLParser.cpp.o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o CMakeFiles/FileParsers.dir/CMLWriter.cpp.o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o CMakeFiles/FileParsers.dir/XYZFileParser.cpp.o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o CMakeFiles/FileParsers.dir/MaeWriter.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o CMakeFiles/FileParsers.dir/PNGParser.cpp.o CMakeFiles/FileParsers.dir/MultithreadedMolSupplier.cpp.o CMakeFiles/FileParsers.dir/MultithreadedSmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/MultithreadedSDMolSupplier.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 55%] Built target FileParsers
make  -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake "--color="
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake "--color="
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make  -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 55%] Building CXX object External/CoordGen/CMakeFiles/testCoordGen.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT External/CoordGen/CMakeFiles/testCoordGen.dir/test.cpp.o -MF CMakeFiles/testCoordGen.dir/test.cpp.o.d -o CMakeFiles/testCoordGen.dir/test.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/test.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 55%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -MF CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o.d -o CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/testUFFForceField.cpp
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o -MF CMakeFiles/graphmolTest1.dir/test1.cpp.o.d -o CMakeFiles/graphmolTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp
[ 56%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -MF CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o.d -o CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/ForceField/UFF/testUFFForceField.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&, double&}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&, double&}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]',
    inlined from 'void testUFFButaneScan()' at /<<PKGBUILDDIR>>/Code/ForceField/UFF/testUFFForceField.cpp:1687:32:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double&, double&}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double&, double&}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]',
    inlined from 'void testMMFFButaneScan()' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp:1895:32:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testMMFFTorsionConstraints()' at /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp:1689:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable testCoordGen
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoordGen.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testCoordGen.dir/test.cpp.o -o testCoordGen  /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testCoordGen
make  -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -MF CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o.d -o CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp
[ 56%] Linking CXX executable testUFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -o testUFFForceField  ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testUFFForceField
make  -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake "--color="
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[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -MF CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o.d -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearComputedProps() const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:153:25:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearProp(const std::string&) const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:145:21:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmolTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolTest1.dir/test1.cpp.o -o graphmolTest1  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../lib/libRDKitForceField.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[ 57%] Linking CXX executable testMMFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceField.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -o testMMFFForceField  ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolTest1
make  -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -MF CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o.d -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target testMMFFForceField
make  -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -MF CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o.d -o CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:33:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testGlobalPickleProps()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:60:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testGlobalPickleProps()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:61:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testGlobalPickleProps()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:62:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void TestAssignChiralTypesFromMolParity::assignMolParity()' at /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp:2820:21:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -o graphmoltestPicklerGlobalSetting  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPicklerGlobalSetting
make  -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -MF CMakeFiles/hanoiTest.dir/hanoitest.cpp.o.d -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testIssue219()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:313:31:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testGithubIssue2510()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1515:31:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithubIssue2510()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1521:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testGithub2441()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1440:31:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testGithub2441()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1444:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testPickleProps()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1087:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testPickleProps()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1088:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testPickleProps()' at /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:1089:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmoltestChirality
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -o graphmoltestChirality  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestChirality
make  -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake "--color="
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[ 57%] Building CXX object Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -MF CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o.d -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/resMolSupplierTest.cpp
[ 57%] Linking CXX executable hanoiTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -o hanoiTest  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target hanoiTest
make  -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake "--color="
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[ 57%] Building CXX object Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -MF CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o.d -o CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testMolBundle.cpp
[ 57%] Linking CXX executable graphmoltestPickler
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -o graphmoltestPickler  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPickler
make  -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o -MF CMakeFiles/testSGroup.dir/testSGroup.cpp.o.d -o CMakeFiles/testSGroup.dir/testSGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/bits/random.h:34,
                 from /usr/include/c++/12/random:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testAddConformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:2427:33:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testAddConformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:2428:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testAddConformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:2429:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable molBundleTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -o molBundleTest  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testGithubIssue678()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:6273:33:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target molBundleTest
make  -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -MF CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o.d -o CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testIssue212()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:1975:31:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue212()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:1977:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testAddHsCoords()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:2009:31:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testAddHsCoords()' at /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:2011:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable resMolSupplierTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -o resMolSupplierTest  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target resMolSupplierTest
make  -f Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/catch_organometallics.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolOrganometallicsCatch.dir/catch_organometallics.cpp.o -MF CMakeFiles/graphmolOrganometallicsCatch.dir/catch_organometallics.cpp.o.d -o CMakeFiles/graphmolOrganometallicsCatch.dir/catch_organometallics.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_organometallics.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmolOrganometallicsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolOrganometallicsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolOrganometallicsCatch.dir/catch_organometallics.cpp.o -o graphmolOrganometallicsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolOrganometallicsCatch
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -MF CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o.d -o CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp
[ 57%] Linking CXX executable testSGroup
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSGroup.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSGroup.dir/testSGroup.cpp.o -o testSGroup  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target testSGroup
make  -f Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o -MF CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o.d -o CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_adjustquery.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_adjustquery.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void C_A_T_C_H_T_E_S_T_0()' at /<<PKGBUILDDIR>>/Code/GraphMol/catch_adjustquery.cpp:293:47:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmolSGroupCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolSGroupCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -o graphmolSGroupCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolSGroupCatch
make  -f Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o -MF CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o.d -o CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_chirality.cpp
[ 57%] Linking CXX executable graphmolAdjustQueryCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolAdjustQueryCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolAdjustQueryCatch.dir/catch_adjustquery.cpp.o -o graphmolAdjustQueryCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolAdjustQueryCatch
make  -f Code/GraphMol/CMakeFiles/canonTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/canonTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/canonTestsCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/canonTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/canonTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o -MF CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o.d -o CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_canon.cpp
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void C_A_T_C_H_T_E_S_T_35()' at /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:261:34:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void C_A_T_C_H_T_E_S_T_35()' at /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:263:23:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmolMolOpsTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -o graphmolMolOpsTest  ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolMolOpsTest
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o -MF CMakeFiles/smiTest1.dir/test.cpp.o.d -o CMakeFiles/smiTest1.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_canon.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmolTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -o graphmolTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
[ 57%] Linking CXX executable canonTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/canonTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/canonTestsCatch.dir/catch_canon.cpp.o -o canonTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolTestsCatch
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -MF CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o.d -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target canonTestsCatch
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable cxsmilesTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -o cxsmilesTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target cxsmilesTest
make  -f Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SmilesParse/CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o -MF CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o.d -o CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/nontetrahedral_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/nontetrahedral_tests.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable nontetrahedralCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/nontetrahedralCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/nontetrahedralCatch.dir/nontetrahedral_tests.cpp.o -o nontetrahedralCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake "--color="
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[ 58%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o -MF CMakeFiles/testDepictor.dir/testDepictor.cpp.o.d -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp
[ 58%] Linking CXX executable smiTest1
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[ 58%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Depictor/CMakeFiles/depictorCatch.dir/catch_tests.cpp.o -MF CMakeFiles/depictorCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/depictorCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/catch_tests.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/chiralityTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/chiralityTestsCatch.dir/catch_chirality.cpp.o -o chiralityTestsCatch  ../RDGeneral/librdkitCatch.a ../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../lib/libRDKitDepictor.so.1.2023.03.3 ../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
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[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o -MF CMakeFiles/fileParsersTest1.dir/test1.cpp.o.d -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp
[ 58%] Linking CXX executable smiTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -o smiTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake "--color="
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[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -MF CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o.d -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp
[ 58%] Linking CXX executable depictorCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/depictorCatch.dir/link.txt --verbose=1
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o -MF CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o.d -o CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testGeneralFileReader.cpp
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3122141()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:644:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2091304()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:457:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2303566()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:467:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2303566()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:468:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2303566()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:469:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2303566()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:470:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2303566()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:471:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue2303566()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:472:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:661:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:662:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:663:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:664:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:665:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:666:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:667:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:668:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:669:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:670:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:671:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void testIssue3135833()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:672:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:255:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:256:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:257:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:258:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:259:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:260:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:261:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:296:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:297:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:298:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:309:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:310:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:311:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:312:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:313:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:314:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:315:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:316:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:317:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:318:11:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:319:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]',
    inlined from 'void test4()' at /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:320:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable testDepictor
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testDepictor.dir/testDepictor.cpp.o -o testDepictor  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testDepictor
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o -MF CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o.d -o CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMultithreadedMolSupplier.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'void testSetStreamIndices()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:1780:26:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<int>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable testGeneralFileReader
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGeneralFileReader.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testGeneralFileReader.dir/testGeneralFileReader.cpp.o -o testGeneralFileReader  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitRDStreams.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testGeneralFileReader
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -MF CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o.d -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp
[ 58%] Linking CXX executable testMultithreadedMolSupplier
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultithreadedMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMultithreadedMolSupplier.dir/testMultithreadedMolSupplier.cpp.o -o testMultithreadedMolSupplier  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitRDStreams.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testMultithreadedMolSupplier
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o -MF CMakeFiles/testTplParser.dir/testTpls.cpp.o.d -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testTpls.cpp
[ 58%] Linking CXX executable testTplParser
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testTplParser.dir/testTpls.cpp.o -o testTplParser  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testTplParser
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -MF CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o.d -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMol2ToMol.cpp
[ 58%] Linking CXX executable testMolSupplier
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -o testMolSupplier  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitRDStreams.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testMolSupplier
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o -MF CMakeFiles/testSequence.dir/testSequence.cpp.o.d -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testSequence.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2667:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2668:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2669:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2670:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2691:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2692:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2693:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue2963522()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:2694:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable testSequence
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSequence.dir/testSequence.cpp.o -o testSequence  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testSequence
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -MF CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o.d -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testIssue265()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:673:49:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue265()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:677:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue265()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:678:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testIssue265()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:679:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable testMol2ToMol
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -o testMol2ToMol  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testMol2ToMol
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -MF CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o.d -o CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp
[ 58%] Linking CXX executable testMolWriter
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -o testMolWriter  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testMolWriter
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -MF CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o.d -o CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp
[ 59%] Linking CXX executable testExtendedStereoParsing
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -o testExtendedStereoParsing  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target testExtendedStereoParsing
make  -f Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o -MF CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o.d -o CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileParserCatchTest.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable XYZFileParserCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/XYZFileParserCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/XYZFileParserCatchTest.dir/XYZFileParserCatchTest.cpp.o -o XYZFileParserCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target XYZFileParserCatchTest
make  -f Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/build
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp:18:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o -MF CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o.d -o CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/cdxml_parser_catch.cpp
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable testPropertyLists
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPropertyLists.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -o testPropertyLists  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target testPropertyLists
make  -f Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FileParsers/CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o -MF CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o.d -o CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/molfile_stereo_catch.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/molfile_stereo_catch.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable fileParsersTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/fileParsersTest1.dir/test1.cpp.o -o fileParsersTest1  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target fileParsersTest1
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o -MF CMakeFiles/testSubstructMatch.dir/test1.cpp.o.d -o CMakeFiles/testSubstructMatch.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp
[ 59%] Linking CXX executable molfileStereoCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/molfileStereoCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molfileStereoCatchTest.dir/molfile_stereo_catch.cpp.o -o molfileStereoCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target molfileStereoCatchTest
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void C_A_T_C_H_T_E_S_T_65()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp:1573:33:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void C_A_T_C_H_T_E_S_T_65()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp:1577:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void C_A_T_C_H_T_E_S_T_59()' at /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp:1374:35:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable cdxmlParserCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/cdxmlParserCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/cdxmlParserCatchTest.dir/cdxml_parser_catch.cpp.o -o cdxmlParserCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target cdxmlParserCatchTest
make  -f Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/build.make Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/DependInfo.cmake "--color="
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make  -f Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/build.make Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/GenericGroups/CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o -MF CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o.d -o CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/generic_tests.cpp
[ 60%] Linking CXX executable substructTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -o substructTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target substructTestCatch
make  -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o -MF CMakeFiles/Descriptors.dir/Crippen.cpp.o.d -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp
[ 60%] Linking CXX executable fileParsersCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -o fileParsersCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target fileParsersCatchTest
[ 60%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/BCUT.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/BCUT.cpp.o -MF CMakeFiles/Descriptors.dir/BCUT.cpp.o.d -o CMakeFiles/Descriptors.dir/BCUT.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void test5QueryRoot()' at /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp:380:14:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/generic_tests.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::Descriptors::CrippenParams&}; _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Descriptors::CrippenParams>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]',
    inlined from 'RDKit::Descriptors::CrippenParamCollection::CrippenParamCollection(const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:186:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 60%] Linking CXX executable testSubstructMatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testSubstructMatch.dir/test1.cpp.o -o testSubstructMatch  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target testSubstructMatch
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -MF CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o.d -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp: In function 'std::pair<double, double> RDKit::Descriptors::{anonymous}::BCUT2D(std::unique_ptr<Eigen::Matrix<double, -1, -1> >&, const std::vector<double>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp:68:71: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
   68 |                                  const std::vector<double> &atom_props) {
      |                                                                       ^
[ 60%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -MF CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o.d -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.cpp
[ 60%] Linking CXX executable testGenericGroups
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGenericGroups.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testGenericGroups.dir/generic_tests.cpp.o -o testGenericGroups  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target testGenericGroups
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp
[ 61%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o -MF CMakeFiles/Descriptors.dir/MolSurf.cpp.o.d -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::pair<double, double> RDKit::Descriptors::BCUT2D(const RDKit::ROMol&, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp:98:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::vector<double> RDKit::Descriptors::BCUT2D(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp:113:21:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::vector<double> RDKit::Descriptors::BCUT2D(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp:114:22:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/alloc_traits.h:33,
                 from /usr/include/c++/12/ext/alloc_traits.h:34,
                 from /usr/include/c++/12/bits/basic_string.h:39,
                 from /usr/include/c++/12/string:53,
                 from /usr/include/c++/12/bits/locale_classes.h:40,
                 from /usr/include/c++/12/bits/ios_base.h:41,
                 from /usr/include/c++/12/streambuf:41,
                 from /usr/include/c++/12/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/12/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/iterator_range_core.hpp:26,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:11:
In function 'void std::_Construct(_Tp*, _Args&& ...) [with _Tp = pair<int, int>; _Args = {const pair<int, int>&}]',
    inlined from '_ForwardIterator std::__do_uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const pair<int, int>*; _ForwardIterator = pair<int, int>*]' at /usr/include/c++/12/bits/stl_uninitialized.h:120:21,
    inlined from 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const std::pair<int, int>*; _ForwardIterator = std::pair<int, int>*; bool _TrivialValueTypes = false]' at /usr/include/c++/12/bits/stl_uninitialized.h:137:32,
    inlined from '_ForwardIterator std::uninitialized_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = const pair<int, int>*; _ForwardIterator = pair<int, int>*]' at /usr/include/c++/12/bits/stl_uninitialized.h:185:15,
    inlined from '_ForwardIterator std::__uninitialized_copy_a(_InputIterator, _InputIterator, _ForwardIterator, allocator<_Tp>&) [with _InputIterator = const pair<int, int>*; _ForwardIterator = pair<int, int>*; _Tp = pair<int, int>]' at /usr/include/c++/12/bits/stl_uninitialized.h:372:37,
    inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const std::pair<int, int>*; _Tp = std::pair<int, int>; _Alloc = std::allocator<std::pair<int, int> >]' at /usr/include/c++/12/bits/vector.tcc:796:38,
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = std::pair<int, int>; _Alloc = std::allocator<std::pair<int, int> >]' at /usr/include/c++/12/bits/stl_vector.h:1409:17,
    inlined from 'void testReplaceCoreMatchVectMultipleMappingToCore()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:974:17:
/usr/include/c++/12/bits/stl_construct.h:119:7: warning: 'void* __builtin_memcpy(void*, const void*, unsigned int)' writing 56 bytes into a region of size 48 overflows the destination [-Wstringop-overflow=]
  119 |       ::new((void*)__p) _Tp(std::forward<_Args>(__args)...);
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/arm-linux-gnueabihf/c++/12/bits/c++allocator.h:33,
                 from /usr/include/c++/12/bits/allocator.h:46,
                 from /usr/include/c++/12/string:41:
In member function '_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = std::pair<int, int>]',
    inlined from 'static _Tp* std::allocator_traits<std::allocator<_CharT> >::allocate(allocator_type&, size_type) [with _Tp = std::pair<int, int>]' at /usr/include/c++/12/bits/alloc_traits.h:464:28,
    inlined from 'std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = std::pair<int, int>; _Alloc = std::allocator<std::pair<int, int> >]' at /usr/include/c++/12/bits/stl_vector.h:378:33,
    inlined from 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const std::pair<int, int>*; _Tp = std::pair<int, int>; _Alloc = std::allocator<std::pair<int, int> >]' at /usr/include/c++/12/bits/vector.tcc:787:40,
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = std::pair<int, int>; _Alloc = std::allocator<std::pair<int, int> >]' at /usr/include/c++/12/bits/stl_vector.h:1409:17,
    inlined from 'void testReplaceCoreMatchVectMultipleMappingToCore()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:974:17:
/usr/include/c++/12/bits/new_allocator.h:137:55: note: at offset [8, 56] into destination object of size 56 allocated by 'operator new'
  137 |         return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp)));
      |                                                       ^
[ 61%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o -MF CMakeFiles/Descriptors.dir/Lipinski.cpp.o.d -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -MF CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o.d -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
[ 61%] Linking CXX executable testChemTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -o testChemTransforms  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target testChemTransforms
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -MF CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o.d -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o -MF CMakeFiles/Descriptors.dir/MQN.cpp.o.d -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.cpp
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Linking CXX executable chemTransformsTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemTransformsTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -o chemTransformsTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target chemTransformsTestCatch
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o -MF CMakeFiles/testFragCatalog.dir/test1.cpp.o.d -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/test1.cpp
[ 61%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o -MF CMakeFiles/Descriptors.dir/Property.cpp.o.d -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp
[ 61%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -MF CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o.d -o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp:32:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable filterCatalogTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -o filterCatalogTest  ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp:32:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target filterCatalogTest
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake "--color="
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -MF CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::vector<double> RDKit::Descriptors::Properties::computeProperties(const RDKit::ROMol&, bool) const' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp:170:18:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -MF CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o.d -o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.cpp
[ 62%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -MF CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o.d -o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.cpp
[ 62%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -MF CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o.d -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.cpp
[ 62%] Linking CXX executable testFragCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testFragCatalog.dir/test1.cpp.o -o testFragCatalog  ../../../lib/libRDKitFragCatalog.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testFragCatalog
[ 63%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AtomFeat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AtomFeat.cpp.o -MF CMakeFiles/Descriptors.dir/AtomFeat.cpp.o.d -o CMakeFiles/Descriptors.dir/AtomFeat.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 63%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
[ 64%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o -MF CMakeFiles/testFingerprints.dir/test1.cpp.o.d -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o -MF CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o.d -o CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/OxidationNumbers.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'RDKit::DOUBLE_VECT RDKit::GetBitDiscrims(const FragCatalog*, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:106:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'RDKit::DOUBLE_VECT RDKit::GetBitDiscrims(const FragCatalog*, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:107:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'RDKit::DOUBLE_VECT RDKit::GetBitDiscrims(const FragCatalog*, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:108:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/OxidationNumbers.cpp:18:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void RDKit::Descriptors::calcOxidationNumbers(const RDKit::ROMol&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/OxidationNumbers.cpp:97:23:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/EEM.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/EEM.cpp.o -MF CMakeFiles/Descriptors.dir/EEM.cpp.o.d -o CMakeFiles/Descriptors.dir/EEM.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/EEM.cpp
[ 64%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -MF CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o.d -o CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testMHFPFingerprint.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable testMHFPFingerprint
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMHFPFingerprint.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -o testMHFPFingerprint  ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testMHFPFingerprint
[ 64%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -MF CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o.d -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PBF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PBF.cpp.o -MF CMakeFiles/Descriptors.dir/PBF.cpp.o.d -o CMakeFiles/Descriptors.dir/PBF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/EEM.cpp:31:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -MF CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o.d -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.cpp:51:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'double RDKit::Descriptors::PBF(const RDKit::ROMol&, int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.cpp:129:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PMI.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/PMI.cpp.o -MF CMakeFiles/Descriptors.dir/PMI.cpp.o.d -o CMakeFiles/Descriptors.dir/PMI.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PMI.cpp
[ 65%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o  ../../../../lib/libRDKitFragCatalog.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target rdfragcatalog
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o -MF CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o.d -o CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR3D.cpp
[ 65%] Linking CXX executable testFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testFingerprints.dir/test1.cpp.o -o testFingerprints  ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PMI.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 65%] Built target testFingerprints
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/RDF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/RDF.cpp.o -MF CMakeFiles/Descriptors.dir/RDF.cpp.o.d -o CMakeFiles/Descriptors.dir/RDF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MORSE.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MORSE.cpp.o -MF CMakeFiles/Descriptors.dir/MORSE.cpp.o.d -o CMakeFiles/Descriptors.dir/MORSE.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:34:
/usr/include/c++/12/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  739 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getRDFDesc(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:115:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetRDF(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:151:13,
    inlined from 'void RDKit::Descriptors::RDF(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:211:11:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getRDFDesc(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:116:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetRDF(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:151:13,
    inlined from 'void RDKit::Descriptors::RDF(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:211:11:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getRDFDesc(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:117:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetRDF(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:151:13,
    inlined from 'void RDKit::Descriptors::RDF(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:211:11:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getRDFDesc(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:118:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetRDF(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:151:13,
    inlined from 'void RDKit::Descriptors::RDF(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:211:11:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getRDFDesc(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:119:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetRDF(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:151:13,
    inlined from 'void RDKit::Descriptors::RDF(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:211:11:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getRDFDesc(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:120:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetRDF(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:151:13,
    inlined from 'void RDKit::Descriptors::RDF(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.cpp:211:11:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Fingerprints/CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o -MF CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o.d -o CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:34:
/usr/include/c++/12/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  739 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getMORSEDesc(const double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:118:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetMORSE(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:159:15,
    inlined from 'void RDKit::Descriptors::MORSE(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:215:13:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getMORSEDesc(const double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:119:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetMORSE(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:159:15,
    inlined from 'void RDKit::Descriptors::MORSE(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:215:13:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getMORSEDesc(const double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:120:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetMORSE(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:159:15,
    inlined from 'void RDKit::Descriptors::MORSE(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:215:13:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getMORSEDesc(const double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:121:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetMORSE(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:159:15,
    inlined from 'void RDKit::Descriptors::MORSE(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:215:13:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getMORSEDesc(const double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:122:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetMORSE(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:159:15,
    inlined from 'void RDKit::Descriptors::MORSE(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:215:13:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'void RDKit::Descriptors::{anonymous}::getMORSEDesc(const double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:123:12,
    inlined from 'void RDKit::Descriptors::{anonymous}::GetMORSE(double*, const RDKit::ROMol&, const RDKit::Conformer&, std::vector<double>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:159:15,
    inlined from 'void RDKit::Descriptors::MORSE(const RDKit::ROMol&, std::vector<double>&, int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.cpp:215:13:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/GETAWAY.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/GETAWAY.cpp.o -MF CMakeFiles/Descriptors.dir/GETAWAY.cpp.o.d -o CMakeFiles/Descriptors.dir/GETAWAY.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp
In file included from /usr/include/c++/12/vector:64,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:11:
/usr/include/c++/12/bits/stl_vector.h: In function 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:15:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]',
    inlined from 'void RDKit::SparseIntVect<IndexType>::setVal(IndexType, int) [with IndexType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:95:13,
    inlined from 'void testRDKitFP()' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:1460:20:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = long long unsigned int; _Tp = int; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]',
    inlined from 'void RDKit::SparseIntVect<IndexType>::setVal(IndexType, int) [with IndexType = long long unsigned int]' at /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:95:13,
    inlined from 'void testTopologicalTorsionFPOld()' at /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:1592:20:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp: In function 'void C_A_T_C_H_T_E_S_T_35()':
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  666 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  666 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  666 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  666 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:666:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
[ 65%] Linking CXX executable testFingerprintGenerators
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -o testFingerprintGenerators  ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target testFingerprintGenerators
[ 66%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/WHIM.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/WHIM.cpp.o -MF CMakeFiles/Descriptors.dir/WHIM.cpp.o.d -o CMakeFiles/Descriptors.dir/WHIM.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/WHIM.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp: In function 'void C_A_T_C_H_T_E_S_T_29()':
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  537 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  537 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  537 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  537 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:537:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp: In function 'void C_A_T_C_H_T_E_S_T_23()':
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  402 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  402 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:402:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp: In function 'Eigen::MatrixXd RDKit::Descriptors::{anonymous}::GetPinv(const Eigen::MatrixXd&)':
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:282:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Eigen::Index' {aka 'int'} [-Wsign-compare]
  282 |   for (unsigned int i = 0; i < A.cols(); ++i) {
      |                            ~~^~~~~~~~~~
In file included from /usr/include/c++/12/vector:64,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:11:
/usr/include/c++/12/bits/stl_vector.h: In function 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
/usr/include/catch2/catch.hpp: In function 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = __gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >; Sentinel = __gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >]':
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1829 |         std::string rangeToString(InputIterator first, Sentinel last) {
      |                     ^~~~~~~~~~~~~
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::vector<long long unsigned int>]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >; Sentinel = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >]' at /usr/include/catch2/catch.hpp:1833:21:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::vector<long long unsigned int>]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >; Sentinel = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >]' at /usr/include/catch2/catch.hpp:1835:33:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp: In function 'void C_A_T_C_H_T_E_S_T_17()':
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  262 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  262 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:262:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp: In function 'void C_A_T_C_H_T_E_S_T_3()':
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:205:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  205 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:205:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:205:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
  205 | }
      | ^
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:205:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:205:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/fpgen_catch_tests.cpp:205:1: note: parameter passing for argument of type 'std::initializer_list<long long unsigned int>' changed in GCC 7.1
/usr/include/catch2/catch.hpp: In function 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >; Sentinel = std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >]':
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >' changed in GCC 7.1
 1829 |         std::string rangeToString(InputIterator first, Sentinel last) {
      |                     ^~~~~~~~~~~~~
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >' changed in GCC 7.1
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'void Catch::BinaryExpr<LhsT, RhsT>::streamReconstructedExpression(std::ostream&) const [with LhsT = const std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >&; RhsT = const std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >&]' at /usr/include/catch2/catch.hpp:2231:21:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'void Catch::BinaryExpr<LhsT, RhsT>::streamReconstructedExpression(std::ostream&) const [with LhsT = const std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >&; RhsT = const std::map<long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > >&]' at /usr/include/catch2/catch.hpp:2231:21:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::pair<unsigned int, unsigned int> > > >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
/usr/include/catch2/catch.hpp: In function 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = __gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >; Sentinel = __gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >]':
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1829 |         std::string rangeToString(InputIterator first, Sentinel last) {
      |                     ^~~~~~~~~~~~~
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::vector<long long unsigned int>]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >; Sentinel = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >]' at /usr/include/catch2/catch.hpp:1833:21:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::vector<long long unsigned int>]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::vector<long long unsigned int>]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >; Sentinel = __gnu_cxx::__normal_iterator<const std::vector<long long unsigned int>*, std::vector<std::vector<long long unsigned int> > >]' at /usr/include/catch2/catch.hpp:1835:33:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
/usr/include/catch2/catch.hpp: In function 'std::string Catch::Detail::rangeToString(InputIterator, Sentinel) [with InputIterator = std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; Sentinel = std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >' changed in GCC 7.1
 1829 |         std::string rangeToString(InputIterator first, Sentinel last) {
      |                     ^~~~~~~~~~~~~
/usr/include/catch2/catch.hpp:1829:21: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >' changed in GCC 7.1
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::map<long long unsigned int, std::vector<std::vector<int> > >]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::map<long long unsigned int, std::vector<std::vector<int> > >]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::map<long long unsigned int, std::vector<std::vector<int> > >]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'void Catch::BinaryExpr<LhsT, RhsT>::streamReconstructedExpression(std::ostream&) const [with LhsT = const std::map<long long unsigned int, std::vector<std::vector<int> > >&; RhsT = const std::map<long long unsigned int, std::vector<std::vector<int> > >&]' at /usr/include/catch2/catch.hpp:2231:21:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
In function 'std::string Catch::rangeToString(const Range&) [with Range = std::map<long long unsigned int, std::vector<std::vector<int> > >]',
    inlined from 'static std::string Catch::StringMaker<R, typename std::enable_if<(Catch::is_range<T>::value && (! Catch::Detail::IsStreamInsertable<T>::value))>::type>::convert(const R&) [with R = std::map<long long unsigned int, std::vector<std::vector<int> > >]' at /usr/include/catch2/catch.hpp:2042:41,
    inlined from 'std::string Catch::Detail::stringify(const T&) [with T = std::map<long long unsigned int, std::vector<std::vector<int> > >]' at /usr/include/catch2/catch.hpp:1645:123,
    inlined from 'void Catch::BinaryExpr<LhsT, RhsT>::streamReconstructedExpression(std::ostream&) const [with LhsT = const std::map<long long unsigned int, std::vector<std::vector<int> > >&; RhsT = const std::map<long long unsigned int, std::vector<std::vector<int> > >&]' at /usr/include/catch2/catch.hpp:2231:21:
/usr/include/catch2/catch.hpp:2019:77: note: parameter passing for argument of type 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >' changed in GCC 7.1
 2019 |         return ::Catch::Detail::rangeToString( begin( range ), end( range ) );
      |                                                                             ^
[ 66%] Linking CXX executable fpGenTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpGenTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/fpGenTestCatch.dir/fpgen_catch_tests.cpp.o -o fpGenTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
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[ 66%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o -MF CMakeFiles/testMolTransforms.dir/test1.cpp.o.d -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp
[ 66%] Linking CXX executable fpTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -o fpTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target fpTestCatch
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -MF CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o.d -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
                 from /usr/include/c++/12/algorithm:61,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:35:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<greater<double> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:36:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:47:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:58:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:59:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:68:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:69:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:83:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:84:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:98:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:99:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test1Canonicalization()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:100:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<greater<double> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testWeightedCentroid()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:400:24:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 66%] Linking CXX executable testMolTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMolTransforms.dir/test1.cpp.o -o testMolTransforms  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target testMolTransforms
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -MF CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o.d -o CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMultiThread.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<greater<double> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<greater<double> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = greater<double>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<double> RDKit::Descriptors::{anonymous}::clusterArray2(std::vector<double>, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:223:12:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<greater<double> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<greater<double> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<double*, vector<double> >; _Compare = greater<double>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'std::vector<double> RDKit::Descriptors::{anonymous}::clusterArray2(std::vector<double>, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:223:12:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::vector<double> RDKit::Descriptors::{anonymous}::clusterArray2(std::vector<double>, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:233:22:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::vector<double> RDKit::Descriptors::{anonymous}::clusterArray2(std::vector<double>, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:240:24:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::vector<double> RDKit::Descriptors::{anonymous}::clusterArray2(std::vector<double>, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:249:24:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable testMMFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -o testMMFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testMMFFForceFieldHelpers
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -MF CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o.d -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Descriptors::{anonymous}::getGETAWAYDescCustom(Eigen::MatrixXd, Eigen::MatrixXd, Eigen::MatrixXd, int, std::vector<int>, const RDKit::ROMol&, std::vector<double>&, unsigned int, const std::string&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:387:25:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Descriptors::{anonymous}::getGETAWAYDesc(Eigen::MatrixXd, Eigen::MatrixXd, Eigen::MatrixXd, int, std::vector<int>, const RDKit::ROMol&, std::vector<double>&, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.cpp:610:25:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -MF CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o.d -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
[ 67%] Linking CXX executable testMMFFForceFieldHelpersMultiThread
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -o testMMFFForceFieldHelpersMultiThread  ../../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testMMFFForceFieldHelpersMultiThread
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -MF CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o.d -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
[ 67%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/CoulombMat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/CoulombMat.cpp.o -MF CMakeFiles/Descriptors.dir/CoulombMat.cpp.o.d -o CMakeFiles/Descriptors.dir/CoulombMat.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/CoulombMat.cpp
[ 67%] Linking CXX executable testCrystalForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -o testCrystalForceField  ../../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testCrystalForceField
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/DependInfo.cmake "--color="
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make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/DistGeomHelpers/CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o -MF CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/catch_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDescriptors.so.1 -o ../../../lib/libRDKitDescriptors.so.1.2023.03.3 CMakeFiles/Descriptors.dir/Crippen.cpp.o CMakeFiles/Descriptors.dir/BCUT.cpp.o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o CMakeFiles/Descriptors.dir/MolSurf.cpp.o CMakeFiles/Descriptors.dir/Lipinski.cpp.o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o CMakeFiles/Descriptors.dir/MQN.cpp.o CMakeFiles/Descriptors.dir/Property.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o CMakeFiles/Descriptors.dir/AtomFeat.cpp.o CMakeFiles/Descriptors.dir/OxidationNumbers.cpp.o CMakeFiles/Descriptors.dir/EEM.cpp.o CMakeFiles/Descriptors.dir/PBF.cpp.o CMakeFiles/Descriptors.dir/PMI.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR3D.cpp.o CMakeFiles/Descriptors.dir/RDF.cpp.o CMakeFiles/Descriptors.dir/MORSE.cpp.o CMakeFiles/Descriptors.dir/GETAWAY.cpp.o CMakeFiles/Descriptors.dir/WHIM.cpp.o CMakeFiles/Descriptors.dir/CoulombMat.cpp.o  ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target Descriptors
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake "--color="
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[ 67%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/c++ -DBOOST_PYTHON_MAX_ARITY=32 -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -MF CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o.d -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
[ 67%] Linking CXX executable testUFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -o testUFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testUFFForceFieldHelpers
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -MF CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o.d -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/catch_tests.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/catch_tests.cpp:14:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void C_A_T_C_H_T_E_S_T_18()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/catch_tests.cpp:456:23:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void C_A_T_C_H_T_E_S_T_18()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/catch_tests.cpp:487:23:
/usr/include/c++/12/bits/stl_map.h:511:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  511 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |                                             std::tuple<const key_type&>(__k),
      |                                             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |                                             std::tuple<>());
      |                                             ~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable testMolAlign
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
[ 67%] Linking CXX executable distGeomHelpersCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/distGeomHelpersCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/distGeomHelpersCatch.dir/catch_tests.cpp.o -o distGeomHelpersCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -o testMolAlign  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In file included from /usr/include/c++/12/map:60,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'RDKit::INT_VECT RDKit::EmbedMultipleConfs(ROMol&, unsigned int, unsigned int, int, bool, bool, double, bool, unsigned int, double, boost::python::dict&, double, bool, bool, int, bool, bool, bool, bool, bool, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:89:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'int RDKit::EmbedMolecule(ROMol&, unsigned int, int, bool, bool, double, bool, unsigned int, boost::python::dict&, double, bool, bool, bool, bool, bool, bool, bool, unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:40:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testMolAlign
make  -f Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolAlign/CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o -MF CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o.d -o CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testO3AAlign.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target distGeomHelpersCatch
make  -f Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolAlign/CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/catch_tests.cpp
[ 67%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o  ../../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target rdDistGeom
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -MF CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o.d -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:14:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algobase.h:64,
                 from /usr/include/c++/12/string:50,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:17,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testO3AAlign.cpp:11:
/usr/include/c++/12/bits/stl_pair.h: In instantiation of 'constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper<typename decay<_Tp2>::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper<typename decay<_Tp>::type>::__type = double; typename decay<_Tp>::type = double]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testO3AAlign.cpp:643:37:   required from here
/usr/include/c++/12/bits/stl_pair.h:741:5: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  741 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'RDKit::MolAlign::PyO3A* RDKit::MolAlign::getCrippenO3A(RDKit::ROMol&, RDKit::ROMol&, boost::python::list, boost::python::list, int, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:431:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  431 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:446:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  446 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'boost::python::tuple RDKit::MolAlign::getCrippenO3AForConfs(RDKit::ROMol&, RDKit::ROMol&, int, boost::python::list, boost::python::list, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:507:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  507 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:522:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  522 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 67%] Linking CXX executable molAlignCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/molAlignCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molAlignCatchTest.dir/catch_tests.cpp.o -o molAlignCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target molAlignCatchTest
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub2246()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:2216:17:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub2246()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:2238:17:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 67%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o -MF CMakeFiles/testFeatures.dir/testFeatures.cpp.o.d -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:997:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:998:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:999:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1000:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1001:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1025:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1026:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1027:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1028:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testConstrainedEmbedding()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1029:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub55()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1387:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub55()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1388:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub55()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1389:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub55()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1390:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]',
    inlined from 'void testGithub55()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:1391:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void testTemp()' at /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:506:27:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable testO3AAlign
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testO3AAlign.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testO3AAlign.dir/testO3AAlign.cpp.o -o testO3AAlign  ../../../lib/libRDKitO3AAlign.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testO3AAlign
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -MF CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o.d -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
[ 67%] Linking CXX executable testDistGeomHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -o testDistGeomHelpers  ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testDistGeomHelpers
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o -MF CMakeFiles/testMolCatalog.dir/test1.cpp.o.d -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/test1.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o  ../../../../lib/libRDKitO3AAlign.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target rdMolAlign
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o -MF CMakeFiles/FMCS.dir/FMCS.cpp.o.d -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.cpp
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test6()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:417:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test6()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:418:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test6()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:419:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithub2077()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:890:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithub2077()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:891:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithub2077()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:892:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithub2077()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:896:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithub2077()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:897:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void testGithub2077()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:898:19:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/bind.hpp:30,
                 from /usr/include/boost/property_tree/json_parser/detail/parser.hpp:7,
                 from /usr/include/boost/property_tree/json_parser/detail/read.hpp:13,
                 from /usr/include/boost/property_tree/json_parser.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.cpp:16:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable testFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testFeatures.dir/testFeatures.cpp.o -o testFeatures  ../../../lib/libRDKitMolChemicalFeatures.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testFeatures
make  -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/hashfunctions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/hashfunctions.cpp.o -MF CMakeFiles/MolHash.dir/hashfunctions.cpp.o.d -o CMakeFiles/MolHash.dir/hashfunctions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/hashfunctions.cpp
[ 67%] Linking CXX executable testShapeHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -o testShapeHelpers  ../../../lib/libRDKitShapeHelpers.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testShapeHelpers
[ 68%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o -MF CMakeFiles/FMCS.dir/Seed.cpp.o.d -o CMakeFiles/FMCS.dir/Seed.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.cpp
[ 68%] Linking CXX executable testMolCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMolCatalog.dir/test1.cpp.o -o testMolCatalog  ../../../lib/libRDKitMolCatalog.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMolCatalog
[ 68%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -MF CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o.d -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
[ 68%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -MF CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o.d -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
[ 68%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o -MF CMakeFiles/MolHash.dir/normalize.cpp.o.d -o CMakeFiles/MolHash.dir/normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake "--color="
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make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o -MF CMakeFiles/MMPA.dir/MMPA.cpp.o.d -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp
make  -f Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/build.make Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o -MF CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/catch_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 69%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2023.03.3 CMakeFiles/MolHash.dir/hashfunctions.cpp.o CMakeFiles/MolHash.dir/normalize.cpp.o  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2023.03.3 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target MolHash
make  -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -MF CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o.d -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 69%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2023.03.3 CMakeFiles/MMPA.dir/MMPA.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libz.so 
[ 69%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2023.03.3 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libz.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2023.03.3 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target MMPA
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -MF CMakeFiles/molInterchangeTest1.dir/test1.cpp.o.d -o CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target FMCS
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o -MF CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o.d -o CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/molinterchange_catch.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/catch_tests.cpp:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp:13:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 70%] Linking CXX executable trajectoryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -o trajectoryTest  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target trajectoryTest
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -MF CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o.d -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp
[ 70%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o -MF CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/CIPMol.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 71%] Linking CXX executable molInterchangeTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -o molInterchangeTest1  ../../../lib/libRDKitMolInterchange.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target molInterchangeTest1
[ 71%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o -MF CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/CIPLabeler.cpp
[ 72%] Linking CXX executable molInterchangeCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molInterchangeCatchTest.dir/molinterchange_catch.cpp.o -o molInterchangeCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolInterchange.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target molInterchangeCatchTest
[ 72%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Mancude.cpp
make  -f Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/build.make Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/build.make Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Abbreviations/CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o -MF CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o.d -o CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/catch_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Digraph.cpp
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Node.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Node.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Node.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Node.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Node.cpp
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Edge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Edge.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Edge.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Edge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Edge.cpp
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Sort.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/Sort.cpp.o -MF CMakeFiles/testCIPLabeler.dir/Sort.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/Sort.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Sort.cpp
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Configuration.cpp
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Sp2Bond.cpp
[ 72%] Linking CXX executable testAbbreviations
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAbbreviations.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testAbbreviations.dir/catch_tests.cpp.o -o testAbbreviations  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitAbbreviations.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testAbbreviations
[ 72%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeWriter.cpp
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o -MF CMakeFiles/ChemReactions.dir/Reaction.cpp.o.d -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp
[ 72%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -MF CMakeFiles/ChemReactions.dir/MDLParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MDLParser.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Sp2Bond.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 72%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o -MF CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Tetrahedral.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/property_map/vector_property_map.hpp:14,
                 from /usr/include/boost/property_map/property_map.hpp:602,
                 from /usr/include/boost/graph/adjacency_list.hpp:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h:31,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeWriter.cpp:19:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp:35:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Configuration.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Tetrahedral.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs/Tetrahedral.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 73%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule1a.cpp
[ 73%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp
[ 73%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule1b.cpp
[ 73%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -MF CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/DaylightParser.cpp
[ 74%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.cpp
[ 74%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule2.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 74%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule3.cpp
[ 74%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp
[ 74%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule4a.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::setStreamIndices(SDMolSupplier&, boost::python::api::object)' at /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp:35:18:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 74%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule4b.cpp
[ 75%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTMolSupplier.cpp
[ 75%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
[ 75%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule4c.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTMolSupplier.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp:35:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void {anonymous}::setRXNRoleOfAllMoleculeAtoms(RDKit::ROMol&, int)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp:51:19:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesMolSupplier.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionDepict.cpp
[ 75%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule5.cpp
[ 76%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule5New.cpp
[ 76%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/Rule6.cpp
[ 76%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
[ 76%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp
[ 76%] Building CXX object Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_CIPLABELER_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/CIPLabeler/CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o -MF CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o.d -o CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules/SequenceRule.cpp
[ 76%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp
[ 76%] Linking CXX executable testCIPLabeler
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCIPLabeler.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testCIPLabeler.dir/catch_tests.cpp.o CMakeFiles/testCIPLabeler.dir/CIPMol.cpp.o CMakeFiles/testCIPLabeler.dir/CIPLabeler.cpp.o CMakeFiles/testCIPLabeler.dir/Mancude.cpp.o CMakeFiles/testCIPLabeler.dir/Digraph.cpp.o CMakeFiles/testCIPLabeler.dir/Node.cpp.o CMakeFiles/testCIPLabeler.dir/Edge.cpp.o CMakeFiles/testCIPLabeler.dir/Sort.cpp.o CMakeFiles/testCIPLabeler.dir/configs/Configuration.cpp.o CMakeFiles/testCIPLabeler.dir/configs/Sp2Bond.cpp.o CMakeFiles/testCIPLabeler.dir/configs/Tetrahedral.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule1a.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule1b.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule2.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule3.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule4a.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule4b.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule4c.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule5.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule5New.cpp.o CMakeFiles/testCIPLabeler.dir/rules/Rule6.cpp.o CMakeFiles/testCIPLabeler.dir/rules/SequenceRule.cpp.o -o testCIPLabeler  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target testCIPLabeler
[ 76%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -MF CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MoleculeParser.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp:33:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -MF CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o.d -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -MF CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o.d -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -MF CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o.d -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
[ 76%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -MF CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o.d -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
[ 76%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MultithreadedSmilesMolSupplier.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:35:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::ReactionRunnerUtils::generateProductConformers(RDKit::Conformer*, const RDKit::ROMol&, ReactantProductAtomMapping*)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:1313:30:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o -MF CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o.d -o CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MultithreadedSDMolSupplier.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MultithreadedSmilesMolSupplier.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp:32:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o -MF CMakeFiles/testDescriptors.dir/test.cpp.o.d -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp
[ 77%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PNGParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PNGParser.cpp.o -MF CMakeFiles/ChemReactions.dir/PNGParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/PNGParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PNGParser.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MultithreadedSDMolSupplier.cpp:13:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -MF CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o.d -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
[ 77%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o -MF CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o.d -o CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/CDXMLParser.cpp
[ 77%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o CMakeFiles/rdmolfiles.dir/MultithreadedSmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MultithreadedSDMolSupplier.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/testATF.cpp.o -MF CMakeFiles/testATF.dir/testATF.cpp.o.d -o CMakeFiles/testATF.dir/testATF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testATF.cpp
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -o testAUTOCORR2D  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testBCUT.dir/testBCUT.cpp.o -MF CMakeFiles/testBCUT.dir/testBCUT.cpp.o.d -o CMakeFiles/testBCUT.dir/testBCUT.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testBCUT.cpp
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testATF.dir/testATF.cpp.o -o testATF  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -MF CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o.d -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testEEM.dir/DependInfo.cmake "--color="
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testEEM.dir/testEEM.cpp.o -MF CMakeFiles/testEEM.dir/testEEM.cpp.o.d -o CMakeFiles/testEEM.dir/testEEM.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testEEM.cpp
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testBCUT.dir/testBCUT.cpp.o -o testBCUT  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -MF CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o.d -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/algorithm/string/detail/classification.hpp:16,
                 from /usr/include/boost/algorithm/string/classification.hpp:18,
                 from /usr/include/boost/algorithm/string/trim.hpp:23,
                 from /usr/include/boost/algorithm/string.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:16:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void testProperties()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:1892:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testProperties()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:1906:18:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void testProperties()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:1907:18:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable testEEM
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEEM.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testEEM.dir/testEEM.cpp.o -o testEEM  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 77%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -MF CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o.d -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testDescriptors.dir/test.cpp.o -o testDescriptors  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testPBF.dir/testPBF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testPBF.dir/testPBF.cpp.o -MF CMakeFiles/testPBF.dir/testPBF.cpp.o.d -o CMakeFiles/testPBF.dir/testPBF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testPBF.cpp
make  -f Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o -MF CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o.d -o CMakeFiles/testRDFcustom.dir/testRDFcustom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testRDFcustom.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/numeric/conversion/converter_policies.hpp:19,
                 from /usr/include/boost/numeric/conversion/converter.hpp:14,
                 from /usr/include/boost/numeric/conversion/cast.hpp:33,
                 from /usr/include/boost/lexical_cast/detail/converter_numeric.hpp:36,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:43,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/multiprecision/detail/number_base.hpp:20,
                 from /usr/include/boost/multiprecision/traits/is_variable_precision.hpp:10,
                 from /usr/include/boost/multiprecision/detail/precision.hpp:9,
                 from /usr/include/boost/multiprecision/number.hpp:25,
                 from /usr/include/boost/multiprecision/cpp_int.hpp:12,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp:36:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'RDKit::EnumerationTypes::RGROUPS RDKit::getSizesFromBBs(const std::vector<std::vector<T> >&) [with T = boost::shared_ptr<ROMol>]' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h:79:20,
    inlined from 'void RDKit::EnumerationStrategyBase::initialize(const RDKit::ChemicalReaction&, const RDKit::EnumerationTypes::BBS&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h:149:41:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testPBF.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/testRDF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testRDF.dir/testRDF.cpp.o -MF CMakeFiles/testRDF.dir/testRDF.cpp.o.d -o CMakeFiles/testRDF.dir/testRDF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testRDF.cpp
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void testPBFEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testPBF.cpp:116:56:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 78%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2023.03.3 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/PNGParser.cpp.o CMakeFiles/ChemReactions.dir/CDXMLParser.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o  ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testRDFcustom.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target ChemReactions
make  -f Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/testMORSE.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testMORSE.dir/testMORSE.cpp.o -MF CMakeFiles/testMORSE.dir/testMORSE.cpp.o.d -o CMakeFiles/testMORSE.dir/testMORSE.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testMORSE.cpp
[ 78%] Linking CXX executable testPBF
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPBF.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testPBF.dir/testPBF.cpp.o -o testPBF  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/DependInfo.cmake "--color="
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[ 78%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/test3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/test3D.dir/test3D.cpp.o -MF CMakeFiles/test3D.dir/test3D.cpp.o.d -o CMakeFiles/test3D.dir/test3D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp
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/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMORSE.dir/testMORSE.cpp.o -o testMORSE  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o -MF CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o.d -o CMakeFiles/testAUTOCORR3D.dir/testAUTOCORR3D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testAUTOCORR3D.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/algorithm/string/detail/classification.hpp:16,
                 from /usr/include/boost/algorithm/string/classification.hpp:18,
                 from /usr/include/boost/algorithm/string/trim.hpp:23,
                 from /usr/include/boost/algorithm/string.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:21:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test3DEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:453:32:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test3DEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:454:32:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test3DEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:455:32:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test3DEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:456:32:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test3DEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:457:32:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test3DEdges()' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test3D.cpp:458:32:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
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      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 79%] Linking CXX executable testCoulombMat
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoulombMat.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testCoulombMat.dir/testCoulombMat.cpp.o -o testCoulombMat  ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitDistGeomHelpers.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitDistGeometry.so.1.2023.03.3 ../../../lib/libRDKitForceFieldHelpers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitForceField.so.1.2023.03.3 ../../../lib/libRDKitOptimizer.so.1.2023.03.3 ../../../lib/libRDKitTrajectory.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitAlignment.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target testCoulombMat
make  -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -MF CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o.d -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp: In function 'std::pair<double, double> {anonymous}::{anonymous}::BCUT2D_list(const RDKit::ROMol&, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:437:61: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  437 |                                       python::list atomprops) {
      |                                                             ^
In file included from /usr/include/c++/12/bits/stl_algobase.h:64,
                 from /usr/include/c++/12/string:50,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:16:
/usr/include/c++/12/bits/stl_pair.h: In instantiation of 'constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double; _T2 = double; typename __strip_reference_wrapper<typename decay<_Tp2>::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper<typename decay<_Tp>::type>::__type = double; typename decay<_Tp>::type = double]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:538:16:   required from here
/usr/include/c++/12/bits/stl_pair.h:741:5: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  741 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
[ 79%] Linking CXX executable descriptorsTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/descriptorsTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/descriptorsTestCatch.dir/catch_tests.cpp.o -o descriptorsTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target descriptorsTestCatch
[ 79%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
In file included from /usr/include/c++/12/vector:64,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22:
/usr/include/c++/12/bits/stl_vector.h: In constructor 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:18:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h: In function 'void __static_initialization_and_destruction_0(int, int)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:27:32: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   27 | const DashPattern dots{2.0, 6.0};
      |                                ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:28:34: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   28 | const DashPattern dashes{6.0, 4.0};
      |                                  ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:29:39: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   29 | const DashPattern shortDashes{2.0, 2.0};
      |                                       ^
In file included from /usr/include/c++/12/vector:70:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'virtual void RDKit::MolDraw2D::drawArc(const RDGeom::Point2D&, double, double, double, double, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:413:18:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'virtual void RDKit::MolDraw2D::drawRect(const RDGeom::Point2D&, const RDGeom::Point2D&, bool)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:429:18:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDKit::DrawColour>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:69:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:70:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:72:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:73:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:74:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:75:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:76:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:77:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:78:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:79:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:80:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDKit::DrawColour>}; _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'std::__enable_if_t<std::is_constructible<std::pair<const _Key, _Tp>, _Pair>::value, std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Tp>, std::_Select1st<std::pair<const _Key, _Tp> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Tp> >::other>::iterator, bool> > std::map<_Key, _Tp, _Compare, _Alloc>::insert(_Pair&&) [with _Pair = std::pair<unsigned int, RDKit::DrawColour>; _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]' at /usr/include/c++/12/bits/stl_map.h:858:27,
    inlined from 'void RDKit::MolDraw2D::makeReactionComponents(const std::vector<boost::shared_ptr<RDKit::ROMol> >&, const std::vector<int>*, int, std::map<int, RDKit::DrawColour>&, std::vector<std::shared_ptr<RDKit::MolDraw2D_detail::DrawMol> >&, double&, double&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:875:36:
/usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type 'std::map<int, RDKit::DrawColour>::const_iterator' {aka 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator'} changed in GCC 7.1
  638 |           return _M_t._M_emplace_hint_unique(__pos,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
  639 |                                              std::forward<_Args>(__args)...);
      |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::iterator std::map<_Key, _Tp, _Compare, _Alloc>::emplace_hint(const_iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDKit::DrawColour>}; _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'std::__enable_if_t<std::is_constructible<std::pair<const _Key, _Tp>, _Pair>::value, std::pair<typename std::_Rb_tree<_Key, std::pair<const _Key, _Tp>, std::_Select1st<std::pair<const _Key, _Tp> >, _Compare, typename __gnu_cxx::__alloc_traits<_Allocator>::rebind<std::pair<const _Key, _Tp> >::other>::iterator, bool> > std::map<_Key, _Tp, _Compare, _Alloc>::insert(_Pair&&) [with _Pair = std::pair<unsigned int, RDKit::DrawColour>; _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]' at /usr/include/c++/12/bits/stl_map.h:858:27,
    inlined from 'void RDKit::MolDraw2D::makeReactionComponents(const std::vector<boost::shared_ptr<RDKit::ROMol> >&, const std::vector<int>*, int, std::map<int, RDKit::DrawColour>&, std::vector<std::shared_ptr<RDKit::MolDraw2D_detail::DrawMol> >&, double&, double&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:882:32:
/usr/include/c++/12/bits/stl_map.h:638:45: note: parameter passing for argument of type 'std::map<int, RDKit::DrawColour>::const_iterator' {aka 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator'} changed in GCC 7.1
  638 |           return _M_t._M_emplace_hint_unique(__pos,
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
  639 |                                              std::forward<_Args>(__args)...);
      |                                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp:46:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -MF CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o.d -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:14:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::pair<double, double> {anonymous}::{anonymous}::BCUT2D_tuple(const RDKit::ROMol&, boost::python::tuple)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:449:19:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'std::pair<double, double> {anonymous}::{anonymous}::BCUT2D_list(const RDKit::ROMol&, boost::python::list)' at /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:440:19:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 80%] Linking CXX executable testFMCS
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -o testFMCS  ../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target testFMCS
[ 81%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o -MF CMakeFiles/FMCStest.dir/testFMCS.cpp.o.d -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'std::string testChEMBL_Txt(const char*, double, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:550:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
  550 |   fprintf(fres, "%s;%lu;%.1f;%.4f;%u;%u;%s;", test, mols.size(), th, sec,
      |                     ~~^                             ~~~~~~~~~~~
      |                       |                                      |
      |                       long unsigned int                      std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                     %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet_SMI(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1232:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1232 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1244:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1244 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s\n", n, mols.size(),
      |                         ~~^                         ~~~~~~~~~~~
      |                           |                                  |
      |                           long unsigned int                  std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1350:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1350 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1403:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1403 |       fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1492:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1492 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::arcPoints(const RDGeom::Point2D&, const RDGeom::Point2D&, std::vector<RDGeom::Point2D>&, float, float)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:46:21:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'std::vector<RDGeom::Point2D> RDKit::MolDraw2D_detail::handdrawnLine(RDGeom::Point2D, RDGeom::Point2D, double, bool, bool, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:208:16:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'std::vector<RDGeom::Point2D> RDKit::MolDraw2D_detail::handdrawnLine(RDGeom::Point2D, RDGeom::Point2D, double, bool, bool, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:212:18:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'std::vector<RDGeom::Point2D> RDKit::MolDraw2D_detail::handdrawnLine(RDGeom::Point2D, RDGeom::Point2D, double, bool, bool, unsigned int, double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:214:16:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D&, RDGeom::Point2D&, RDGeom::Point2D&, RDGeom::Point2D&}; _Tp = std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D>; _Alloc = std::allocator<std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D&, RDGeom::Point2D&, RDGeom::Point2D&, RDGeom::Point2D&}; _Tp = std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D>; _Alloc = std::allocator<std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D> >]',
    inlined from 'std::vector<std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D> > RDKit::MolDraw2D_detail::getWavyLineSegments(const RDGeom::Point2D&, const RDGeom::Point2D&, unsigned int, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:406:21:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D>*, std::vector<std::tuple<RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D, RDGeom::Point2D> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target rdMolDescriptors
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/../../RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:47:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setPODVal(const std::string&, T) [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:286:20,
    inlined from 'void RDKit::Dict::setVal(const std::string&, int)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:295:60,
    inlined from 'void RDKit::RDProps::setProp(const std::string&, T, bool) const [with T = int]' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:86:19,
    inlined from 'void test504()' at /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:498:18:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o  ../../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target rdFMCS
[ 81%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o -MF CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o.d -o CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/AtomSymbol.cpp
[ 81%] Linking CXX executable FMCStest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCStest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/FMCStest.dir/testFMCS.cpp.o -o FMCStest  ../../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target FMCStest
[ 81%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawAnnotation.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:30,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:28:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D, RDGeom::Point2D, double&}; _Tp = conrec::ConrecSegment; _Alloc = std::allocator<conrec::ConrecSegment>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<conrec::ConrecSegment>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolHash_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -MF CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o.d -o CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D, RDGeom::Point2D, double&}; _Tp = conrec::ConrecSegment; _Alloc = std::allocator<conrec::ConrecSegment>]',
    inlined from 'void conrec::Contour(const double*, size_t, size_t, size_t, size_t, const double*, const double*, size_t, double*, std::vector<ConrecSegment>&)' at /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h:196:27:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<conrec::ConrecSegment*, std::vector<conrec::ConrecSegment> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:60,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:17:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -MF CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o.d -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
[ 81%] Linking CXX executable molHashCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/molHashCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -o molHashCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolHash.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
[ 81%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target molHashCatchTest
[ 81%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 81%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o  ../../../../lib/libRDKitMolHash.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target rdMolHash
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -MF CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o.d -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
In file included from /usr/include/c++/12/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.cpp:13:
/usr/include/c++/12/bits/stl_vector.h: In constructor 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.cpp:15:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h: In function 'void __static_initialization_and_destruction_0(int, int)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:27:32: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   27 | const DashPattern dots{2.0, 6.0};
      |                                ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:28:34: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   28 | const DashPattern dashes{6.0, 4.0};
      |                                  ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:29:39: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   29 | const DashPattern shortDashes{2.0, 2.0};
      |                                       ^
[ 82%] Linking CXX executable testMMPA
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -o testMMPA  ../../../lib/libRDKitMMPA.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target testMMPA
make  -f Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/build.make Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/build.make Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/Deprotect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DDeprotect_EXPORTS -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Deprotect/CMakeFiles/Deprotect.dir/Deprotect.cpp.o -MF CMakeFiles/Deprotect.dir/Deprotect.cpp.o.d -o CMakeFiles/Deprotect.dir/Deprotect.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Deprotect.cpp
In file included from /usr/include/c++/12/vector:70:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMolMCH::makeBondHighlights(std::vector<std::unique_ptr<RDKit::MolDraw2D_detail::DrawShape> >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.cpp:116:29:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMolMCH::makeBondHighlights(std::vector<std::unique_ptr<RDKit::MolDraw2D_detail::DrawShape> >&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.cpp:119:29:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 82%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/algorithm:61,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:13:
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algo.h:60:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Distance = int; _Tp = pair<int, double>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Distance = int; _Tp = RDGeom::Point2D; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1782:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1782 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1802 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Distance = int; _Tp = RDGeom::Point2D; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  224 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1908 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1922 |           std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Deprotect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Deprotect.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:17:
/usr/include/c++/12/bits/stl_vector.h: In constructor 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:27:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h: In function 'void __static_initialization_and_destruction_0(int, int)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:27:32: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   27 | const DashPattern dots{2.0, 6.0};
      |                                ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:28:34: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   28 | const DashPattern dashes{6.0, 4.0};
      |                                  ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:29:39: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   29 | const DashPattern shortDashes{2.0, 2.0};
      |                                       ^
[ 82%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMMPA.so CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o  ../../../../lib/libRDKitMMPA.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target rdMMPA
[ 82%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawText.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawText.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawText.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawText.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawText.cpp
In file included from /usr/include/c++/12/vector:64,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:15:
/usr/include/c++/12/bits/stl_vector.h: In constructor 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:16:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h: In function 'void __static_initialization_and_destruction_0(int, int)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:27:32: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   27 | const DashPattern dots{2.0, 6.0};
      |                                ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:28:34: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   28 | const DashPattern dashes{6.0, 4.0};
      |                                  ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:29:39: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   29 | const DashPattern shortDashes{2.0, 2.0};
      |                                       ^
/usr/include/c++/12/bits/stl_vector.h: In constructor 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<RDGeom::Point2D>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp: In member function 'void RDKit::MolDraw2D_detail::DrawMol::extractAttachments()':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:360:43: note: parameter passing for argument of type 'std::initializer_list<RDGeom::Point2D>' changed in GCC 7.1
  360 |         std::vector<Point2D> points{p1, p2};
      |                                           ^
[ 82%] Linking CXX shared library ../../../lib/libRDKitDeprotect.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect && /usr/bin/cmake -E cmake_link_script CMakeFiles/Deprotect.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDeprotect.so.1 -o ../../../lib/libRDKitDeprotect.so.1.2023.03.3 CMakeFiles/Deprotect.dir/Deprotect.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDeprotect.so.1.2023.03.3 ../../../lib/libRDKitDeprotect.so.1 ../../../lib/libRDKitDeprotect.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target Deprotect
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
In file included from /usr/include/c++/12/vector:70:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'RDKit::MolDraw2D_detail::DrawShapeArrow::DrawShapeArrow(const std::vector<RDGeom::Point2D>&, double, bool, RDKit::DrawColour, bool, int, int, int, double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:107:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'RDKit::MolDraw2D_detail::DrawShapeArrow::DrawShapeArrow(const std::vector<RDGeom::Point2D>&, double, bool, RDKit::DrawColour, bool, int, int, int, double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:108:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:319:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:320:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:321:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:333:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:334:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:335:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:342:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:343:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:344:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:350:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:351:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildSingleColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:352:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:369:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:370:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:371:20:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:373:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:374:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:375:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:376:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:377:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:378:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:390:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:391:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:392:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:393:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:394:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:395:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:407:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:408:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:409:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:410:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:411:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:412:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:413:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:414:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeSolidWedge::buildTwoColorTriangles()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:415:22:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::DrawColour&}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeDashedWedge::buildLines()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:560:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeDashedWedge::buildLines()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:561:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeDashedWedge::buildLines()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:563:31:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawShapeDashedWedge::buildLines()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.cpp:565:31:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompData.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompData.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupDecompData.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupDecompData.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecompData.cpp
In file included from /usr/include/c++/12/vector:70:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::extractAtomCoords()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:247:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'double RDKit::MolDraw2D_detail::DrawMol::getNoteStartAngle(const RDKit::Atom*) const' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:2384:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::MolDraw2D_detail::StringRect&, RDKit::MolDraw2D_detail::OrientType&, unsigned int}; _Tp = std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int>; _Alloc = std::allocator<std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::MolDraw2D_detail::StringRect&, RDKit::MolDraw2D_detail::OrientType&, unsigned int}; _Tp = std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int>; _Alloc = std::allocator<std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int> >]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::extractRadicals()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:470:27:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int>*, std::vector<std::tuple<RDKit::MolDraw2D_detail::StringRect, RDKit::MolDraw2D_detail::OrientType, int> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp: In member function 'void RDKit::MolDraw2D_detail::DrawMol::makeQueryBond(RDKit::Bond*, double)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:1769:48: note: parameter passing for argument of type 'std::initializer_list<RDGeom::Point2D>' changed in GCC 7.1
 1769 |                                  midp + segment};
      |                                                ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:1781:40: note: parameter passing for argument of type 'std::initializer_list<RDGeom::Point2D>' changed in GCC 7.1
 1781 |         std::vector<Point2D> pts{p1, p2};
      |                                        ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:1787:20: note: parameter passing for argument of type 'std::initializer_list<RDGeom::Point2D>' changed in GCC 7.1
 1787 |         pts = std::vector<Point2D>{p1, p2};
      |                    ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<int, double>}; _Tp = std::pair<int, double>; _Alloc = std::allocator<std::pair<int, double> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<int, double> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3364:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3366:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<int, double>}; _Tp = std::pair<int, double>; _Alloc = std::allocator<std::pair<int, double> >]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::pair<int, double>; _Alloc = std::allocator<std::pair<int, double> >]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3379:21:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3381:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<pair<int, double>*, vector<pair<int, double> > >; _Compare = RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)::<lambda(const pair<int, double>&, const pair<int, double>&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3381:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<int, double>*, std::vector<std::pair<int, double> > >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3393:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3394:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeHighlightEnd(const RDKit::Atom*, const RDKit::Atom*, double, const std::vector<RDKit::Atom*>&, std::vector<RDGeom::Point2D>&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:3404:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algobase.h:64,
                 from /usr/include/c++/12/string:50,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawText.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawText.cpp:13:
/usr/include/c++/12/bits/stl_pair.h: In instantiation of 'constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper<typename decay<_Tp2>::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper<typename decay<_Tp>::type>::__type = double; typename decay<_Tp>::type = double]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawText.cpp:166:47:   required from here
/usr/include/c++/12/bits/stl_pair.h:741:5: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  741 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:2245:20:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:2245:20:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]',
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:2256:20:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1937 |           std::__introsort_loop(__first, __last,
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1938 |                                 std::__lg(__last - __first) * 2,
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1939 |                                 __comp);
      |                                 ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]',
    inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)> >]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
    inlined from 'void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator<RDGeom::Point2D*, vector<RDGeom::Point2D> >; _Compare = RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)::<lambda(RDGeom::Point2D&, RDGeom::Point2D&)>]' at /usr/include/c++/12/bits/stl_algo.h:4853:18,
    inlined from 'void RDKit::MolDraw2D_detail::DrawMol::makeBondHighlightLines(double, double)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.cpp:2256:20:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1849 |           std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |           ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1854 |         std::__insertion_sort(__first, __last, __comp);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupData.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::pair<RDGeom::Point2D, RDGeom::Point2D>}; _Tp = std::pair<RDGeom::Point2D, RDGeom::Point2D>; _Alloc = std::allocator<std::pair<RDGeom::Point2D, RDGeom::Point2D> >]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<std::pair<RDGeom::Point2D, RDGeom::Point2D> >::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<RDGeom::Point2D, RDGeom::Point2D>}; _Tp = std::pair<RDGeom::Point2D, RDGeom::Point2D>; _Alloc = std::allocator<std::pair<RDGeom::Point2D, RDGeom::Point2D> >]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<RDGeom::Point2D, RDGeom::Point2D>*, std::vector<std::pair<RDGeom::Point2D, RDGeom::Point2D> > >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp:34:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextNotFT.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupCore.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecompData.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecompData.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o -MF CMakeFiles/rdmolops.dir/rdmolops.cpp.o.d -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolops.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextSVG.cpp
make  -f Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o -MF CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o.d -o CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupData.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupData.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolops.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o -MF CMakeFiles/rdmolops.dir/MolOps.cpp.o.d -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupUtils.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DJS.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextJS.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o -MF CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o.d -o CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.cpp
[ 85%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o -MF CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o.d -o CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/PositionVariation.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupUtils.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o -MF CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o.d -o CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/LinkNode.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextCairo.cpp
[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupCore.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFT.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupCore.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupCore.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearProp(const std::string&) const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:145:21:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearComputedProps() const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:153:25,
    inlined from 'std::pair<boost::shared_ptr<RDKit::RWMol>, bool> RDKit::RCore::extractCoreFromMolMatch(const RDKit::ROMol&, const RDKit::MatchVectType&, const RDKit::RGroupDecompositionParameters&) const' at /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupCore.cpp:149:39:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'std::pair<boost::shared_ptr<RDKit::RWMol>, bool> RDKit::RCore::extractCoreFromMolMatch(const RDKit::ROMol&, const RDKit::MatchVectType&, const RDKit::RGroupDecompositionParameters&) const' at /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupCore.cpp:228:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolEnumerator_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLENUMERATOR_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o -MF CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o.d -o CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/RepeatUnit.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFT.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'virtual void RDKit::MolDraw2D_detail::DrawTextFT::getStringRects(const std::string&, std::vector<std::shared_ptr<RDKit::MolDraw2D_detail::StringRect> >&, std::vector<RDKit::MolDraw2D_detail::TextDrawType>&, std::vector<char>&) const' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFT.cpp:178:21:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTSVG.cpp
[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecompParams.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/RepeatUnit.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTJS.cpp
[ 85%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o -MF CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o.d -o CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTCairo.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecompParams.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecompParams.cpp:11:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o -MF CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o.d -o CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ChiralityOps.cpp
[ 85%] Linking CXX shared library ../../../lib/libRDKitMolEnumerator.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolEnumerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolEnumerator.so.1 -o ../../../lib/libRDKitMolEnumerator.so.1.2023.03.3 CMakeFiles/MolEnumerator.dir/MolEnumerator.cpp.o CMakeFiles/MolEnumerator.dir/PositionVariation.cpp.o CMakeFiles/MolEnumerator.dir/LinkNode.cpp.o CMakeFiles/MolEnumerator.dir/RepeatUnit.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupScore.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolEnumerator.so.1.2023.03.3 ../../../lib/libRDKitMolEnumerator.so.1 ../../../lib/libRDKitMolEnumerator.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target MolEnumerator
[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupFingerprintScore.cpp
[ 86%] Linking CXX shared library ../../../lib/libRDKitMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolDraw2D.so.1 -o ../../../lib/libRDKitMolDraw2D.so.1.2023.03.3 CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o CMakeFiles/MolDraw2D.dir/AtomSymbol.cpp.o CMakeFiles/MolDraw2D.dir/DrawAnnotation.cpp.o CMakeFiles/MolDraw2D.dir/DrawMol.cpp.o CMakeFiles/MolDraw2D.dir/DrawMolMCH.cpp.o CMakeFiles/MolDraw2D.dir/DrawShape.cpp.o CMakeFiles/MolDraw2D.dir/DrawText.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextNotFT.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DJS.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextJS.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DCairo.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextCairo.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFT.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFTSVG.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFTJS.cpp.o CMakeFiles/MolDraw2D.dir/DrawTextFTCairo.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libfreetype.so ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libcairo.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolDraw2D.so.1.2023.03.3 ../../../lib/libRDKitMolDraw2D.so.1 ../../../lib/libRDKitMolDraw2D.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Built target MolDraw2D
[ 86%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupGa.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupGa.cpp.o -MF CMakeFiles/RGroupDecomposition.dir/RGroupGa.cpp.o.d -o CMakeFiles/RGroupDecomposition.dir/RGroupGa.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupGa.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ChiralityOps.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o -MF CMakeFiles/testReaction.dir/testReaction.cpp.o.d -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -MF CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o.d -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
[ 86%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o CMakeFiles/rdmolops.dir/ChiralityOps.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Built target rdmolops
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -MF CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o.d -o CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupGa.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupGa.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::GaResult}; _Tp = RDKit::GaResult; _Alloc = std::allocator<RDKit::GaResult>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::GaResult>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::GaResult&}; _Tp = RDKit::GaResult; _Alloc = std::allocator<RDKit::GaResult>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::GaResult>::iterator' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::GaResult}; _Tp = RDKit::GaResult; _Alloc = std::allocator<RDKit::GaResult>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::GaResult; _Alloc = std::allocator<RDKit::GaResult>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'std::back_insert_iterator<_Container>& std::back_insert_iterator<_Container>::operator=(typename _Container::value_type&&) [with _Container = std::vector<RDKit::GaResult>]' at /usr/include/c++/12/bits/stl_iterator.h:743:22,
    inlined from '_OIter std::transform(_IIter, _IIter, _OIter, _UnaryOperation) [with _IIter = __gnu_cxx::__normal_iterator<future<RDKit::GaResult>*, vector<future<RDKit::GaResult> > >; _OIter = back_insert_iterator<vector<RDKit::GaResult> >; _UnaryOperation = RDKit::RGroupGa::runBatch()::<lambda(future<RDKit::GaResult>&)>]' at /usr/include/c++/12/bits/stl_algo.h:4263:12,
    inlined from 'std::vector<RDKit::GaResult> RDKit::RGroupGa::runBatch()' at /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupGa.cpp:333:19:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::GaResult*, std::vector<RDKit::GaResult> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::GaResult; _Alloc = std::allocator<RDKit::GaResult>]',
    inlined from 'std::vector<RDKit::GaResult> RDKit::RGroupGa::runBatch()' at /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupGa.cpp:339:24:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::GaResult*, std::vector<RDKit::GaResult> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 87%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRGroupDecomposition.so.1 -o ../../../lib/libRDKitRGroupDecomposition.so.1.2023.03.3 CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupDecompData.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupData.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupUtils.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupCore.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupDecompParams.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupScore.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupFingerprintScore.cpp.o CMakeFiles/RGroupDecomposition.dir/RGroupGa.cpp.o  ../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitga.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2023.03.3 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target RGroupDecomposition
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp
[ 87%] Linking CXX executable testReactionFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -o testReactionFingerprints  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target testReactionFingerprints
make  -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -MF CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o.d -o CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp:34:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'RDKit::EnumerationTypes::RGROUPS RDKit::getSizesFromBBs(const std::vector<std::vector<T> >&) [with T = boost::shared_ptr<ROMol>]' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h:79:20,
    inlined from 'void RDKit::EnumerationStrategyBase::initialize(const RDKit::ChemicalReaction&, const RDKit::EnumerationTypes::BBS&)' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h:149:41:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:32:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 87%] Linking CXX executable testEnumeration
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumeration.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -o testEnumeration  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target testEnumeration
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -MF CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o.d -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/specfun.h:45,
                 from /usr/include/c++/12/cmath:1935,
                 from /usr/include/c++/12/math.h:36,
                 from /usr/include/python3.11/pyport.h:218,
                 from /usr/include/python3.11/Python.h:38,
                 from /usr/include/boost/python/detail/wrap_python.hpp:178,
                 from /usr/include/boost/python/detail/prefix.hpp:13,
                 from /usr/include/boost/python/args.hpp:8:
/usr/include/c++/12/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]':
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2059 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator, iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  189 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:189:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  739 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc:739:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Tp = long long unsigned int]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; bool NoProxy = true; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:279:49:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Tp = long long unsigned int]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; bool NoProxy = true; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:286:53,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; bool NoProxy = true; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:273:9:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Tp = long long unsigned int]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:279:49:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Tp = long long unsigned int]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'static bool boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::contains(Container&, const key_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:146:29,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; bool NoProxy = true; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:286:53,
    inlined from 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:273:9:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:134:28,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:128:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_delete_slice(Container&, PySliceObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:697:42,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; bool NoProxy = true; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:256:49:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_item(Container&, index_type) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:124:28,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; bool NoProxy = true; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:263:41:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:134:28,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_slice(Container&, index_type, index_type) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:128:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_delete_slice(Container&, PySliceObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:697:42,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:256:49:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::delete_item(Container&, index_type) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:124:28,
    inlined from 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]' at /usr/include/boost/python/suite/indexing/indexing_suite.hpp:263:41:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o -MF CMakeFiles/MolStandardize.dir/Metal.cpp.o.d -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]' at /usr/include/boost/python/suite/indexing/container_utils.hpp:36:36:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]' at /usr/include/boost/python/suite/indexing/container_utils.hpp:44:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; <template-parameter-2-2> = void; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::extend(Container&, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:200:29,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:236:36:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; <template-parameter-2-2> = void; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::extend(Container&, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:200:29,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:236:36:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:212:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:220:44,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:206:9:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:212:40:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::append(Container&, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:193:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:220:44,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:206:9:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:664:43:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:672:47:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; <template-parameter-2-2> = void; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:116:32,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; <template-parameter-2-2> = void; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:639:43:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:102:32,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:103:33,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, const data_type&) [with Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:95:9,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:648:47:
/usr/include/c++/12/bits/vector.tcc:164:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  164 |         _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |         ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:664:43:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:672:47:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; <template-parameter-2-2> = void; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator, const_iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:116:32,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1561:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1561 |         return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::_M_insert_dispatch(iterator, _InputIterator, _InputIterator, std::__false_type) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
    inlined from 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; <template-parameter-2-2> = void; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1481:22,
    inlined from 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::set_slice(Container&, index_type, index_type, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; Container = std::vector<long long unsigned int>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>]' at /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:33,
    inlined from 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, true> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]' at /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:685:47:
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1779 |           _M_range_insert(__pos, __first, __last,
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1780 |                           std::__iterator_category(__first));
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_vector.h:1779:26: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
[ 87%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -MF CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o.d -o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp
[ 87%] Linking CXX executable rxnTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -o rxnTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o -MF CMakeFiles/MolStandardize.dir/Normalize.cpp.o.d -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target rxnTestCatch
[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o -MF CMakeFiles/MolStandardize.dir/Validate.cpp.o.d -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:34:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake "--color="
[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o -MF CMakeFiles/MolStandardize.dir/Charge.cpp.o.d -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -MF CMakeFiles/moldraw2DTest1.dir/test1.cpp.o.d -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16:
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:175:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  175 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/bits/stl_algobase.h:64,
                 from /usr/include/c++/12/bits/specfun.h:45,
                 from /usr/include/c++/12/cmath:1935,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/12/bits/stl_pair.h: In instantiation of 'constexpr std::pair<typename std::__strip_reference_wrapper<typename std::decay<_Tp>::type>::__type, typename std::__strip_reference_wrapper<typename std::decay<_Tp2>::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper<typename decay<_Tp2>::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper<typename decay<_Tp>::type>::__type = double; typename decay<_Tp>::type = double]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:1600:46:   required from here
/usr/include/c++/12/bits/stl_pair.h:741:5: note: parameter passing for argument of type 'std::pair<double, double>' when C++17 is enabled changed to match C++14 in GCC 10.1
  741 |     make_pair(_T1&& __x, _T2&& __y)
      |     ^~~~~~~~~
In copy constructor 'boost::shared_ptr<T>::shared_ptr(const boost::shared_ptr<T>&) [with T = RDKit::ROMol]',
    inlined from 'PyObject* RDKit::RunReactant(ChemicalReaction*, T, unsigned int) [with T = boost::python::api::object]' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:129:14:
/usr/include/boost/smart_ptr/shared_ptr.hpp:416:66: warning: '*(const boost::shared_ptr<RDKit::ROMol>*)((char*)&<unnamed> + offsetof(boost::python::extract<boost::shared_ptr<RDKit::ROMol> >,boost::python::extract<boost::shared_ptr<RDKit::ROMol> >::<unnamed>.boost::python::converter::extract_rvalue<boost::shared_ptr<RDKit::ROMol> >::m_data.boost::python::converter::rvalue_from_python_data<boost::shared_ptr<RDKit::ROMol> >::<unnamed>.boost::python::converter::rvalue_from_python_storage<boost::shared_ptr<RDKit::ROMol> >::storage)).boost::shared_ptr<RDKit::ROMol>::px' may be used uninitialized [-Wmaybe-uninitialized]
  416 |     shared_ptr( shared_ptr const & r ) BOOST_SP_NOEXCEPT : px( r.px ), pn( r.pn )
      |                                                                ~~^~
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function 'PyObject* RDKit::RunReactant(ChemicalReaction*, T, unsigned int) [with T = boost::python::api::object]':
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:129:30: note: '<anonymous>' declared here
  129 |   ROMOL_SPTR react = python::extract<ROMOL_SPTR>(reactant);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/shared_ptr.hpp:17:
In copy constructor 'boost::detail::shared_count::shared_count(const boost::detail::shared_count&)',
    inlined from 'boost::shared_ptr<T>::shared_ptr(const boost::shared_ptr<T>&) [with T = RDKit::ROMol]' at /usr/include/boost/smart_ptr/shared_ptr.hpp:416:72,
    inlined from 'PyObject* RDKit::RunReactant(ChemicalReaction*, T, unsigned int) [with T = boost::python::api::object]' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:129:14:
/usr/include/boost/smart_ptr/detail/shared_count.hpp:438:67: warning: '((const boost::detail::shared_count*)((char*)&<unnamed> + offsetof(boost::python::extract<boost::shared_ptr<RDKit::ROMol> >,boost::python::extract<boost::shared_ptr<RDKit::ROMol> >::<unnamed>.boost::python::converter::extract_rvalue<boost::shared_ptr<RDKit::ROMol> >::m_data.boost::python::converter::rvalue_from_python_data<boost::shared_ptr<RDKit::ROMol> >::<unnamed>.boost::python::converter::rvalue_from_python_storage<boost::shared_ptr<RDKit::ROMol> >::storage)))[1].boost::detail::shared_count::pi_' may be used uninitialized [-Wmaybe-uninitialized]
  438 |     shared_count(shared_count const & r) BOOST_SP_NOEXCEPT: pi_(r.pi_)
      |                                                                 ~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp: In function 'PyObject* RDKit::RunReactant(ChemicalReaction*, T, unsigned int) [with T = boost::python::api::object]':
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:129:30: note: '<anonymous>' declared here
  129 |   ROMOL_SPTR react = python::extract<ROMOL_SPTR>(reactant);
      |                              ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearComputedProps() const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:153:25,
    inlined from 'void RDKit::MolClearComputedProps(const RDOb&) [with RDOb = ChemicalReaction]' at /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/props.hpp:157:25:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::erase(const_iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void RDKit::Dict::clearVal(const std::string&)' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:321:20,
    inlined from 'void RDKit::RDProps::clearProp(const std::string&) const' at /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h:145:21,
    inlined from 'void RDKit::MolClearProp(const RDOb&, const char*) [with RDOb = ChemicalReaction]' at /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/props.hpp:152:16:
/usr/include/c++/12/bits/stl_vector.h:1530:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1530 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -MF CMakeFiles/MolStandardize.dir/Tautomer.cpp.o.d -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::DrawColour&}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]',
    inlined from 'testGithub2931()::<lambda(const std::vector<int>&, RDKit::DrawColour, std::map<int, std::vector<RDKit::DrawColour> >&)>' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:3684:31:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61:
/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:69:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:70:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:72:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:73:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:74:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:75:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:76:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:77:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:78:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:79:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:80:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'testGithub3305()::<lambda(const std::string&, std::__cxx11::regex&, const std::vector<RDGeom::Point2D>&)>' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:4316:23:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]',
    inlined from 'void test3()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:875:23:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = double; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]',
    inlined from 'void test3()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:876:23:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/function.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:33:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/12/bits/vector.tcc:523:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  523 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2541:27:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2542:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2543:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2544:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'RDKit::Conformer::Conformer(unsigned int)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:55:25,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2551:27:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2552:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]',
    inlined from 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:129:25,
    inlined from 'void RDKit::Conformer::setAtomPos(U, const RDGeom::Point3D&) [with U = int]' at /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:136:22,
    inlined from 'void test25Conformers()' at /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:2553:21:
/usr/include/c++/12/bits/stl_vector.h:1032:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1032 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void test14BWPalette()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:2981:22:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o -MF CMakeFiles/MolStandardize.dir/Fragment.cpp.o.d -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o  ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
[ 88%] Linking CXX executable moldraw2DTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -o moldraw2DTest1  ../../../lib/libRDKitMolDraw2D.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcairo.so /usr/lib/arm-linux-gnueabihf/libfreetype.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target rdChemReactions
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
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[ 88%] Built target moldraw2DTest1
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake "--color="
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[ 88%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/usr/include/freetype2 -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -MF CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o.d -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void test3()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:312:31:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
[ 88%] Linking CXX executable moldraw2DRxnTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -o moldraw2DRxnTest1  ../../../lib/libRDKitMolDraw2D.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libcairo.so /usr/lib/arm-linux-gnueabihf/libfreetype.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target moldraw2DRxnTest1
make  -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake "--color="
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make  -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_CAIRO_SUPPORT -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_FREETYPE_SUPPORT -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDraw2D_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/freetype2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -isystem /usr/include/cairo -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -MF CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o.d -o CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/string:50,
                 from /usr/include/catch2/catch.hpp:477,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:10:
/usr/include/c++/12/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<RDKit::DrawColour*, vector<RDKit::DrawColour> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const RDKit::DrawColour>]':
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 2059 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/12/bits/stl_algobase.h:2059:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
In file included from /usr/include/c++/12/vector:64,
                 from /usr/include/catch2/catch.hpp:566:
/usr/include/c++/12/bits/stl_vector.h: In constructor 'std::vector<_Tp, _Alloc>::vector(std::initializer_list<_Tp>, const allocator_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/stl_vector.h:673:7: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
  673 |       vector(initializer_list<value_type> __l,
      |       ^~~~~~
In file included from /usr/include/c++/12/vector:70:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RDKit::DrawColour&}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2209 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25:
/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:69:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:70:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:72:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:73:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:74:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:75:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:76:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:77:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:78:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:79:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:80:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:87:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:88:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:89:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:89:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:90:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:91:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:92:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:93:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:94:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:95:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:96:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:97:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:98:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:127:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:128:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:129:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:129:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:130:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:131:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:132:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:133:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:134:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:135:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:136:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:137:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:138:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:109:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:110:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:111:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:111:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:112:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:113:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:114:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:115:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:116:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:117:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:118:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:119:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:120:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:121:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:20:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h: In function 'void __static_initialization_and_destruction_0(int, int)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:27:32: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   27 | const DashPattern dots{2.0, 6.0};
      |                                ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:28:34: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   28 | const DashPattern dashes{6.0, 4.0};
      |                                  ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h:29:39: note: parameter passing for argument of type 'std::initializer_list<double>' changed in GCC 7.1
   29 | const DashPattern shortDashes{2.0, 2.0};
      |                                       ^
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void C_A_T_C_H_T_E_S_T_299()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:7386:20:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void C_A_T_C_H_T_E_S_T_297()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:7305:20:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/c++/12/functional:62,
                 from /usr/include/boost/config/no_tr1/functional.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:14,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:60,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5:
/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2457 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/map:61:
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void RDKit::useBWAtomPalette(MolDrawOptions&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:495:18:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::{anonymous}::pyDictToColourMap(boost::python::api::object, RDKit::ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:61:46:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::setMonochromeMode(MolDrawOptions&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:555:28,
    inlined from 'void RDKit::setMonochromeMode_helper1(MolDrawOptions&, boost::python::tuple, boost::python::tuple)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:515:27:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::setMonochromeMode(MolDrawOptions&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:555:28,
    inlined from 'void RDKit::setMonochromeMode(MolDraw2D&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:564:20,
    inlined from 'void RDKit::setMonochromeMode_helper2(MolDraw2D&, boost::python::tuple, boost::python::tuple)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:522:27:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:127:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:128:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:129:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:129:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:130:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:131:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:132:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:133:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:134:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:135:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:136:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:137:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDarkModePalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:138:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:69:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:70:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:71:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:72:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:73:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:74:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:75:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:76:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:77:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:78:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:79:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignDefaultPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:80:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:87:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:88:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:89:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:89:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:90:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:91:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:92:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:93:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:94:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:95:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:96:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:97:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignAvalonPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:98:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:109:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:110:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:111:25:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:111:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:112:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:113:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:114:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:115:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:116:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:117:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:118:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:119:13:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:120:12:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignCDKPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:121:14:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::python::stl_input_iterator<RDGeom::Point2D>; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]' at /usr/include/c++/12/bits/stl_vector.h:1668:20,
    inlined from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::python::stl_input_iterator<RDGeom::Point2D>; <template-parameter-2-2> = void; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]' at /usr/include/c++/12/bits/stl_vector.h:706:23,
    inlined from 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = RDGeom::Point2D]' at /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:140:15:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
    inlined from 'void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::python::stl_input_iterator<double>; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1668:20,
    inlined from 'std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::python::stl_input_iterator<double>; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:706:23,
    inlined from 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = double]' at /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:140:15:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]',
    inlined from 'void C_A_T_C_H_T_E_S_T_306()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:7502:33:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]',
    inlined from 'void C_A_T_C_H_T_E_S_T_306()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:7521:33:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1287 |           _M_realloc_insert(end(), __x);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<RDKit::DrawColour*, vector<RDKit::DrawColour> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const RDKit::DrawColour>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<RDKit::DrawColour*, vector<RDKit::DrawColour> >; _Tp = RDKit::DrawColour]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'void C_A_T_C_H_T_E_S_T_306()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:7520:19:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function '_Iterator std::__find_if(_Iterator, _Iterator, _Predicate) [with _Iterator = __gnu_cxx::__normal_iterator<RDKit::DrawColour*, vector<RDKit::DrawColour> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const RDKit::DrawColour>]',
    inlined from '_IIter std::find(_IIter, _IIter, const _Tp&) [with _IIter = __gnu_cxx::__normal_iterator<RDKit::DrawColour*, vector<RDKit::DrawColour> >; _Tp = RDKit::DrawColour]' at /usr/include/c++/12/bits/stl_algo.h:3851:28,
    inlined from 'void C_A_T_C_H_T_E_S_T_306()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:7501:19:
/usr/include/c++/12/bits/stl_algobase.h:2112:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 2112 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 2113 |                        std::__iterator_category(__first));
      |                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
[ 89%] Linking CXX executable testReaction
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReaction.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testReaction.dir/testReaction.cpp.o -o testReaction  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make  -f Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/build.make Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/DependInfo.cmake "--color="
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[ 89%] Building CXX object Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/Deprotect/CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o -MF CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o.d -o CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/deprotectTest.cpp
[ 89%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/Draw/rdMolDraw2D.so CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o  ../../../../lib/libRDKitMolDraw2D.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcairo.so /usr/lib/arm-linux-gnueabihf/libfreetype.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target rdMolDraw2D
make  -f Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/build.make Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/DependInfo.cmake "--color="
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make  -f Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/build.make Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDeprotect_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o -MF CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o.d -o CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap/rdDeprotect.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void C_A_T_C_H_T_E_S_T_205()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:4564:20:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::setMonochromeMode(MolDrawOptions&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:555:28,
    inlined from 'void RDKit::setMonochromeMode(MolDraw2D&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:564:20,
    inlined from 'void C_A_T_C_H_T_E_S_T_164()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:3761:22:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::setMonochromeMode(MolDrawOptions&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:555:28,
    inlined from 'void RDKit::setMonochromeMode(MolDraw2D&, const DrawColour&, const DrawColour&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:564:20,
    inlined from 'void C_A_T_C_H_T_E_S_T_164()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:3776:22:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap/rdDeprotect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap/rdDeprotect.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 89%] Building CXX object Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DEPROTECT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDeprotect_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/Deprotect/Wrap/CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o -MF CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o.d -o CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap/DeprotectWrap.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
[ 90%] Linking CXX executable deprotectTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect && /usr/bin/cmake -E cmake_link_script CMakeFiles/deprotectTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/deprotectTest.dir/deprotectTest.cpp.o -o deprotectTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitDeprotect.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target deprotectTest
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -MF CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o.d -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap/DeprotectWrap.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]',
    inlined from 'void C_A_T_C_H_T_E_S_T_63()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:1347:25:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
[ 90%] Linking CXX shared module ../../../../rdkit/Chem/rdDeprotect.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDeprotect.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDeprotect.so CMakeFiles/rdDeprotect.dir/rdDeprotect.cpp.o CMakeFiles/rdDeprotect.dir/DeprotectWrap.cpp.o  ../../../../lib/libRDKitDeprotect.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target rdDeprotect
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o -MF CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o.d -o CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/testRGroupInternals.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp:32:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/vector.tcc: In function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -MF CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o.d -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void C_A_T_C_H_T_E_S_T_26()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:846:22:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]',
    inlined from 'void RDKit::assignBWPalette(ColourPalette&)' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h:143:13,
    inlined from 'void C_A_T_C_H_T_E_S_T_26()' at /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:862:22:
/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  530 |           __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  531 |                                         std::forward_as_tuple(std::move(__k)),
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  532 |                                         std::tuple<>());
      |                                         ~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable testRGroupDecompInternals
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecompInternals.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testRGroupDecompInternals.dir/testRGroupInternals.cpp.o -o testRGroupDecompInternals  ../../../lib/libRDKitRGroupDecomposition.so.1.2023.03.3 ../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl ../../../lib/libRDKitga.so.1.2023.03.3 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target testRGroupDecompInternals
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -MF CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o.d -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/RGroupDecomposition/CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o -MF CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o.d -o CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/catch_rgd.cpp
[ 91%] Linking CXX executable moldraw2DTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -o moldraw2DTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolDraw2D.so.1.2023.03.3 ../../../lib/libRDKitCIPLabeler.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcairo.so /usr/lib/arm-linux-gnueabihf/libfreetype.so ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Built target moldraw2DTestCatch
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -MF CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o.d -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
[ 91%] Linking CXX executable testRGroupDecomp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -o testRGroupDecomp  ../../../lib/libRDKitRGroupDecomposition.so.1.2023.03.3 ../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl ../../../lib/libRDKitga.so.1.2023.03.3 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake "--color="
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make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -MF CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o.d -o CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp
make  -f Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolEnumerator/CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o -MF CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o.d -o CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/enumerator_catch.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp:34:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 92%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target MolStandardize
make  -f Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/build.make Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolEnumerator_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolEnumerator/Wrap/CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o -MF CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o.d -o CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/Wrap/rdMolEnumerator.cpp
[ 93%] Linking CXX executable rgroupCatchTests
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/rgroupCatchTests.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/rgroupCatchTests.dir/catch_rgd.cpp.o -o rgroupCatchTests  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitRGroupDecomposition.so.1.2023.03.3 ../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl ../../../lib/libRDKitga.so.1.2023.03.3 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target rgroupCatchTests
make  -f Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/build.make Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/build.make Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_TAUTOMERQUERY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DTautomerQuery_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/TautomerQuery/CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o -MF CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o.d -o CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery/TautomerQuery.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/Wrap/rdMolEnumerator.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 93%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o  ../../../../lib/libRDKitRGroupDecomposition.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitFMCS.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitga.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 93%] Built target rdRGroupDecomposition
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake "--color="
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[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o -MF CMakeFiles/molStandardizeTest.dir/test1.cpp.o.d -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/test1.cpp
[ 93%] Linking CXX executable testMolEnumerator
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolEnumerator.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testMolEnumerator.dir/enumerator_catch.cpp.o -o testMolEnumerator  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolEnumerator.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target testMolEnumerator
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake "--color="
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[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -MF CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o.d -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testNormalize.cpp
[ 93%] Linking CXX shared module ../../../../rdkit/Chem/rdMolEnumerator.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolEnumerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolEnumerator.so CMakeFiles/rdMolEnumerator.dir/rdMolEnumerator.cpp.o  ../../../../lib/libRDKitMolEnumerator.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 93%] Built target rdMolEnumerator
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o -MF CMakeFiles/molValidateTest.dir/testValidate.cpp.o.d -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testValidate.cpp
[ 93%] Linking CXX shared library ../../../lib/libRDKitTautomerQuery.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery && /usr/bin/cmake -E cmake_link_script CMakeFiles/TautomerQuery.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitTautomerQuery.so.1 -o ../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 CMakeFiles/TautomerQuery.dir/TautomerQuery.cpp.o  ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../lib/libRDKitTautomerQuery.so.1 ../../../lib/libRDKitTautomerQuery.so
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[ 93%] Built target TautomerQuery
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake "--color="
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o -MF CMakeFiles/molChargeTest.dir/testCharge.cpp.o.d -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testCharge.cpp
[ 93%] Linking CXX executable molNormalizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -o molNormalizeTest  ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
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[ 94%] Linking CXX executable molValidateTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -MF CMakeFiles/molFragmentTest.dir/testFragment.cpp.o.d -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testFragment.cpp
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[ 95%] Linking CXX executable molStandardizeSmallTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeSmallTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -o molStandardizeSmallTest  ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target molStandardizeSmallTest
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -MF CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
[ 95%] Linking CXX executable molFragmentTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -o molFragmentTest  ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target molFragmentTest
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SCAFFOLDNETWORK_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DScaffoldNetwork_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o -MF CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o.d -o CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/ScaffoldNetwork.cpp
In file included from /usr/include/c++/12/vector:70,
                 from /usr/include/catch2/catch.hpp:566,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:10:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  439 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In member function 'std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]',
    inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
    inlined from 'void RDKit::Dict::setVal(const std::string&, T&) [with T = std::__cxx11::basic_string<char>]' at /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:271:20:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  123 |           _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Validate.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
[ 95%] Linking CXX executable molStandardizeCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -o molStandardizeCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target molStandardizeCatchTest
[ 95%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Charge.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
[ 96%] Linking CXX shared library ../../../lib/libRDKitScaffoldNetwork.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitScaffoldNetwork.so.1 -o ../../../lib/libRDKitScaffoldNetwork.so.1.2023.03.3 CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o  ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitScaffoldNetwork.so.1.2023.03.3 ../../../lib/libRDKitScaffoldNetwork.so.1 ../../../lib/libRDKitScaffoldNetwork.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target ScaffoldNetwork
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Validate.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 97%] Linking CXX executable molTautomerTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -o molTautomerTest  ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target molTautomerTest
make  -f Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/build.make Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/build.make Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/TautomerQuery/CMakeFiles/tautomerQueryTestCatch.dir/catch_tests.cpp.o -MF CMakeFiles/tautomerQueryTestCatch.dir/catch_tests.cpp.o.d -o CMakeFiles/tautomerQueryTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery/catch_tests.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Charge.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Metal.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
[ 97%] Linking CXX executable tautomerQueryTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery && /usr/bin/cmake -E cmake_link_script CMakeFiles/tautomerQueryTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/tautomerQueryTestCatch.dir/catch_tests.cpp.o -o tautomerQueryTestCatch  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make  -f Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/build.make Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/build.make Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdTautomerQuery_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/TautomerQuery/Wrap/CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o -MF CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o.d -o CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery/Wrap/rdTautomerQuery.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target tautomerQueryTestCatch
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o -MF CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o.d -o CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Tautomer.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Metal.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/object/class.hpp:9,
                 from /usr/include/boost/python/class.hpp:13,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:9,
                 from /usr/include/boost/python/suite/indexing/map_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Tautomer.cpp:11:
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery/Wrap/rdTautomerQuery.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -MF CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o.d -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
[ 97%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o -MF CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o.d -o CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/PatternFactory.cpp
[ 97%] Linking CXX shared module ../../../../rdkit/Chem/rdTautomerQuery.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdTautomerQuery.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdTautomerQuery.so CMakeFiles/rdTautomerQuery.dir/rdTautomerQuery.cpp.o  ../../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target rdTautomerQuery
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -MF CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o.d -o CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/catch_tests.cpp
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdScaffoldNetwork_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o -MF CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o.d -o CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap/rdScaffoldNetwork.cpp
[ 98%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o  ../../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target rdMolStandardize
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap/rdScaffoldNetwork.cpp:11:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 98%] Linking CXX shared library ../../../lib/libRDKitSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2023.03.3 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o  ../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2023.03.3 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target SubstructLibrary
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake "--color="
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
[ 99%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/catch2 -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o -MF CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o.d -o CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/catch_tests.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -MD -MT Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -MF CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o.d -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
[ 99%] Linking CXX shared module ../../../../rdkit/Chem/Scaffolds/rdScaffoldNetwork.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/Scaffolds/rdScaffoldNetwork.so CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o  ../../../../lib/libRDKitScaffoldNetwork.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target rdScaffoldNetwork
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake "--color="
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -MF CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o.d -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
[ 99%] Linking CXX executable testScaffoldNetwork
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_link_script CMakeFiles/testScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -o testScaffoldNetwork  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitScaffoldNetwork.so.1.2023.03.3 ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target testScaffoldNetwork
[ 99%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++ -DBOOST_SERIALIZATION_DYN_LINK -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_BUILD_DESCRIPTORS3D -DRDK_BUILD_MAEPARSER_SUPPORT -DRDK_BUILD_THREADSAFE_SSS -DRDK_HAS_EIGEN3 -DRDK_TEST_MULTITHREADED -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.11 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++17 -fPIC -MD -MT Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -MF CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o.d -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp:32:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use <iterator> instead.'
   13 | BOOST_HEADER_DEPRECATED("<iterator>")
      | ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12,
                 from /usr/include/boost/python/converter/arg_to_python.hpp:15,
                 from /usr/include/boost/python/call.hpp:15,
                 from /usr/include/boost/python/object_core.hpp:14,
                 from /usr/include/boost/python/args.hpp:22,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp:33:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
[ 99%] Linking CXX executable substructLibraryCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/substructLibraryCatchTest.dir/catch_tests.cpp.o -o substructLibraryCatchTest  ../../RDGeneral/librdkitCatch.a ../../../lib/libRDKitSubstructLibrary.so.1.2023.03.3 ../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl /usr/lib/arm-linux-gnueabihf/libboost_serialization.so 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target substructLibraryCatchTest
[ 99%] Linking CXX executable substructLibraryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -o substructLibraryTest  ../../../lib/libRDKitSubstructLibrary.so.1.2023.03.3 ../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../lib/libRDKitGraphMol.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so ../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../lib/libRDKitDataStructs.so.1.2023.03.3 ../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target substructLibraryTest
[100%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -shared -Wl,-O1 -Wl,-Bsymbolic-functions   -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o  ../../../../lib/libRDKitSubstructLibrary.so.1.2023.03.3 ../../../../lib/libRDKitRDBoost.so.1.2023.03.3 ../../../../lib/libRDKitTautomerQuery.so.1.2023.03.3 ../../../../lib/libRDKitMolStandardize.so.1.2023.03.3 ../../../../lib/libRDKitChemReactions.so.1.2023.03.3 ../../../../lib/libRDKitFilterCatalog.so.1.2023.03.3 ../../../../lib/libRDKitDescriptors.so.1.2023.03.3 ../../../../lib/libRDKitFileParsers.so.1.2023.03.3 ../../../../lib/libRDKitChemTransforms.so.1.2023.03.3 ../../../../lib/libRDKitDepictor.so.1.2023.03.3 ../../../../lib/libRDKitMolAlign.so.1.2023.03.3 ../../../../lib/libRDKitAlignment.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libcoordgen.so /usr/lib/arm-linux-gnueabihf/libmaeparser.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libboost_system.so /usr/lib/arm-linux-gnueabihf/libboost_iostreams.so /usr/lib/arm-linux-gnueabihf/libboost_regex.so /usr/lib/arm-linux-gnueabihf/libz.so ../../../../lib/libRDKitPartialCharges.so.1.2023.03.3 ../../../../lib/libRDKitMolTransforms.so.1.2023.03.3 ../../../../lib/libRDKitEigenSolvers.so.1.2023.03.3 ../../../../lib/libRDKitFingerprints.so.1.2023.03.3 ../../../../lib/libRDKitSubgraphs.so.1.2023.03.3 ../../../../lib/libRDKitSubstructMatch.so.1.2023.03.3 ../../../../lib/libRDKitGenericGroups.so.1.2023.03.3 ../../../../lib/libRDKitSmilesParse.so.1.2023.03.3 ../../../../lib/libRDKitGraphMol.so.1.2023.03.3 ../../../../lib/libRDKitRDGeometryLib.so.1.2023.03.3 ../../../../lib/libRDKitCatalogs.so.1.2023.03.3 ../../../../lib/libRDKitDataStructs.so.1.2023.03.3 /usr/lib/arm-linux-gnueabihf/libboost_serialization.so /usr/lib/arm-linux-gnueabihf/libpython3.11.so /usr/lib/arm-linux-gnueabihf/libboost_python311.so ../../../../lib/libRDKitRDGeneral.so.1.2023.03.3 -ldl 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdSubstructLibrary
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
STATIC_LINK=0 RDKIT_LIBDIR=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib pg_buildext build /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution ID in /etc/os-release: raspbian
debian found in ID_LIKE, treating as Debian
### PostgreSQL 16 build ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-16'
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o rdkit_io.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o mol_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_murckoscaffold':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:343:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  343 |   CROMol scaffold = MolMurckoScaffold(mol);
      |   ^~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_nm_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:363:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  363 |   char *str = computeNMMolHash(mol, opts);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:365:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  365 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:358:7: warning: unused variable 'len' [-Wunused-variable]
  358 |   int len;
      |       ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_adjust_query_properties':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:378:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  378 |   char *data = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:384:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  384 |   Mol *res = deconstructROMol(adj);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:399:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  399 |   char *legend = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:423:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  423 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol2s_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:491:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  491 |     text *ts = (text *)palloc(ts_size);  // new return value
      |     ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:511:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  511 |     char *smiles = makeMolText(mol, &len, false, false);
      |     ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mols':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:549:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  549 |   int32 ts_size = VARHDRSZ + strlen(str);
      |   ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:455:1: warning: control reaches end of non-void function [-Wreturn-type]
  455 | }
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:590:1: warning: control reaches end of non-void function [-Wreturn-type]
  590 | }
      | ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o sfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o rxn_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:134:3: warning: multi-line comment [-Wcomment]
  134 |   //  /* keep compiler quiet - no extra ; */                                \
      |   ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c: In function 'reaction_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:149:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  149 |   bool highlightByReactants = PG_GETARG_BOOL(1);
      |   ^~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o rdkit_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldistsign':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:218:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  218 |   uint8 *as = (uint8 *)VARDATA(a);
      |   ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldist':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:237:10: warning: unused variable 'd' [-Wunused-variable]
  237 |   double d;
      |          ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gmol_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:483:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  483 |         uint8 *k = (uint8 *)VARDATA(key);
      |         ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:495:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  495 |         uint8 *k = (uint8 *)VARDATA(key);
      |         ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:525:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  525 |         uint8 *k = (uint8 *)VARDATA(key);
      |         ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'rdkit_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:607:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  607 |   int siglen = SIGLEN(query);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:621:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  621 |     uint8 *k = (uint8 *)VARDATA(key);
      |     ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gsfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:653:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  653 |   int sum, overlapSum, overlapN;
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:657:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  657 |   int nKey = (ISALLTRUE(key))
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'greaction_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:721:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  721 |         uint8 *k = (uint8 *)VARDATA(key);
      |         ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:738:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  738 |         uint8 *k = (uint8 *)VARDATA(key);
      |         ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:764:9: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  764 |         uint8 *k = (uint8 *)VARDATA(key);
      |         ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: At top level:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:595:13: warning: 'rdkit_consistent' defined but not used [-Wunused-function]
  595 | static bool rdkit_consistent(GISTENTRY *entry, StrategyNumber strategy,
      |             ^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:236:12: warning: 'soergeldist' defined but not used [-Wunused-function]
  236 | static int soergeldist(bytea *a, bytea *b) {
      |            ^~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bfp_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c: In function 'merge_key':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c:653:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  653 |   int siglen = GBFP_INNER_SIGLEN(result);
      |   ^~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bfp_gin.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o low_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o guc.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o cache.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
g++ -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-function -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"' -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o adapter.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
                 from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
                 from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
                 from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
                 from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
                 from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
                 from /usr/include/boost/shared_ptr.hpp:17,
                 from /usr/include/boost/smart_ptr.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:23,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:49:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
   36 | BOOST_PRAGMA_MESSAGE(
      | ^~~~~~~~~~~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bitstring.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringUnion':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:64:7: warning: unused variable 'i' [-Wunused-variable]
   64 |   int i;
      |       ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringIntersection':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:96:7: warning: unused variable 'i' [-Wunused-variable]
   96 |   int i;
      |       ^
g++ -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wcast-function-type -Wshadow=compatible-local -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -DSTAP_SDT_ARG_CONSTRAINT=g -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fvisibility=hidden -shared -o rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rxn_op.o rdkit_gist.o bfp_gist.o bfp_gin.o low_gist.o guc.o cache.o adapter.o bitstring.o -L/usr/lib/arm-linux-gnueabihf  -Wl,-z,relro -Wl,-z,now -L/usr/lib/llvm-15/lib  -Wl,--as-needed -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -L/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib   -lRDKitMolDraw2D -lRDKitMolTransforms -lRDKitMolHash -lRDKitFMCS -lRDKitChemReactions -lRDKitChemTransforms -lRDKitFileParsers -lRDKitSmilesParse -lRDKitFingerprints -lRDKitSubgraphs -lRDKitDescriptors -lRDKitPartialCharges -lRDKitSubstructMatch  -lRDKitGraphMol -lRDKitEigenSolvers -lRDKitDataStructs -lRDKitDepictor -lRDKitRDGeometryLib -lRDKitRDGeneral -pthread  
sed -e's/@RDKIT_PG_BFP_GIST_FETCH@/FUNCTION    9   gbfp_fetch (internal),/;' \
-e's/@RDKIT_GIN_BFP_TRICONSISTENT@/FUNCTION    6   gin_bfp_triconsistent(internal, int2, bfp, int4, internal, internal, internal),/' \
-e's/@RDKIT_PARALLEL_SAFE@/PARALLEL SAFE/' \
 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.sql.in > rdkit--4.3.0.sql
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o rdkit_io.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o mol_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:455:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:590:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
2 warnings generated.
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o sfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o rxn_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:100:37: warning: passing arguments to 'ReactionSubstructFP' without a prototype is deprecated in all versions of C and is not supported in C2x [-Wdeprecated-non-prototype]
  PG_RETURN_BOOL(ReactionSubstructFP(rxn, rxn2));
                                    ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:115:37: warning: passing arguments to 'ReactionSubstructFP' without a prototype is deprecated in all versions of C and is not supported in C2x [-Wdeprecated-non-prototype]
  PG_RETURN_BOOL(ReactionSubstructFP(rxn2, rxn));
                                    ^
2 warnings generated.
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o rdkit_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bfp_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bfp_gin.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o low_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o guc.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o cache.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/usr/bin/clang-15 -std=c++17 -xc++ -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -emit-llvm -c -o adapter.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
/usr/lib/llvm-15/bin/opt -module-summary -f adapter.bc -o adapter.bc
/usr/bin/clang-15 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -Xclang -no-opaque-pointers -Wno-unused-command-line-argument -Wno-compound-token-split-by-macro -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -DRDK_TOOLKIT_VERSION='"2022.09.01"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/16/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bitstring.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-16'
### End 16 build ###
(cd /<<PKGBUILDDIR>>/Code; doxygen doxygen/doxygen.config)
warning: Tag 'TCL_SUBST' at line 213 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SYMBOL_CACHE_SIZE' at line 337 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 557 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'COLS_IN_ALPHA_INDEX' at line 869 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 971 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'USE_INLINE_TREES' at line 1162 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'LATEX_SOURCE_CODE' at line 1327 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1425 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 1431 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1596 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'CLASS_DIAGRAMS' at line 1608 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1617 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
warning: doxygen no longer ships with the FreeSans font.
  You may want to clear or change DOT_FONTNAME.
  Otherwise you run the risk that the wrong font is being used for dot generated graphs.
Doxygen version used: 1.9.4
Searching for include files...
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Searching for dot files...
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Searching for dia files...
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Searching INPUT for files to process...
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/configs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/rules
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Reading and parsing tag files
Parsing files
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Abbreviations.h...
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Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors3D.h...
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Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
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Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
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Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedMolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedMolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSDMolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSDMolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PNGParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PNGParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/GenericGroups.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/GenericGroups/GenericGroups.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/AtomSymbol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/AtomSymbol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawAnnotation.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawAnnotation.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawShape.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawText.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawText.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextCairo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextCairo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFT.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFT.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTCairo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTCairo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTJS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTJS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTSVG.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextFTSVG.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextJS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextJS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextNotFT.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextNotFT.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextSVG.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawTextSVG.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Fonts/roboto_regular.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol//<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:229: warning: unbalanced grouping commands
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:427: warning: unbalanced grouping commands
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:678: warning: unbalanced grouping commands
MolDraw2D/Fonts/roboto_regular.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Fonts/telex_regular.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Fonts/telex_regular.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DHelpers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DJS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DJS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Qt/DrawTextFTQt.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Qt/DrawTextFTQt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Qt/DrawTextQt.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Qt/DrawTextQt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Qt/MolDraw2DQt.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Qt/MolDraw2DQt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/StringRect.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/StringRect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/LinkNode.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/LinkNode.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
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Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Contribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Contribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:62: warning: documented symbol 'for experimental torsion angle RDKit::DGeomHelpers::preferences' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:1066: warning: documented symbol 'modifies molecule in RDKit::MolOps::place' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:1082: warning: documented symbol 'modifies molecule in RDKit::MolOps::place' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:86: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:141: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:210: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:76: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:131: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:200: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:83: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:138: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:207: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:525: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:534: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:79: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:134: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:203: warning: Found unknown command '\override'
202303.3/Code/Numerics/SquareMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/SymmMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/SymmMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Vector.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Vector.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Grid3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Grid3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/point.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/point.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Utils.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Utils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Features/Feature.h...
Parsing file /<<PKGBUILDDIR>>/Code/Features/Feature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ChemicalFeatures/ChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/ChemicalFeatures/ChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Building concept list...
Computing nesting relations for classes...
Associating documentation with classes...
Associating documentation with concepts...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file Catalog.h...
Generating code for file CatalogEntry.h...
Generating code for file CatalogParams.h...
Generating code for file ChemicalFeature.h...
Generating code for file FreeChemicalFeature.h...
Generating code for file MetricFuncs.h...
Generating code for file MetricMatrixCalc.h...
Generating code for file base64.h...
Generating code for file BitOps.h...
Generating code for file BitVect.h...
Generating code for file BitVects.h...
Generating code for file BitVectUtils.h...
Generating code for file DatastructsException.h...
Generating code for file DatastructsStreamOps.h...
Generating code for file DiscreteDistMat.h...
Generating code for file DiscreteValueVect.h...
Generating code for file ExplicitBitVect.h...
Generating code for file FPBReader.h...
Generating code for file MultiFPBReader.h...
Generating code for file SparseBitVect.h...
Generating code for file SparseIntVect.h...
Generating code for file BoundsMatrix.h...
Generating code for file ChiralSet.h...
Generating code for file ChiralViolationContrib.h...
Generating code for file DistGeomUtils.h...
Generating code for file DistViolationContrib.h...
Generating code for file FourthDimContrib.h...
Generating code for file TriangleSmooth.h...
Generating code for file Feature.h...
Generating code for file Contrib.h...
Generating code for file ForceField.h...
Generating code for file AngleBend.h...
Generating code for file AngleBend.h...
Generating code for file AngleConstraint.h...
Generating code for file AngleConstraint.h...
Generating code for file BondStretch.h...
Generating code for file BondStretch.h...
Generating code for file Contribs.h...
Generating code for file Contribs.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistanceConstraint.h...
Generating code for file Nonbonded.h...
Generating code for file Nonbonded.h...
Generating code for file OopBend.h...
Generating code for file Params.h...
Generating code for file Params.h...
Generating code for file PositionConstraint.h...
Generating code for file PositionConstraint.h...
Generating code for file StretchBend.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionConstraint.h...
Generating code for file Inversion.h...
Generating code for file Grid3D.h...
Generating code for file GridUtils.h...
Generating code for file point.h...
Generating code for file Transform.h...
Generating code for file Transform2D.h...
Generating code for file Transform3D.h...
Generating code for file UniformGrid3D.h...
Generating code for file Utils.h...
Generating code for file Abbreviations.h...
Generating code for file Atom.h...
Generating code for file atomic_data.h...
Generating code for file AtomIterators.h...
Generating code for file Bond.h...
Generating code for file BondIterators.h...
Generating code for file Canon.h...
Generating code for file CartesianProduct.h...
Generating code for file Enumerate.h...
Generating code for file EnumerateBase.h...
Generating code for file EnumerateTypes.h...
Generating code for file EnumerationPickler.h...
Generating code for file EnumerationStrategyBase.h...
Generating code for file EvenSamplePairs.h...
Generating code for file RandomSample.h...
Generating code for file RandomSampleAllBBs.h...
Generating code for file PreprocessRxn.h...
Generating code for file Reaction.h...
Generating code for file ReactionFingerprints.h...
Generating code for file ReactionParser.h...
Generating code for file ReactionPickler.h...
Generating code for file ReactionRunner.h...
Generating code for file ReactionUtils.h...
Generating code for file SanitizeRxn.h...
Generating code for file ChemTransforms.h...
Generating code for file MolFragmenter.h...
Generating code for file Chirality.h...
Generating code for file CIPLabeler.h...
Generating code for file CIPMol.h...
Generating code for file Configuration.h...
Generating code for file Sp2Bond.h...
Generating code for file Tetrahedral.h...
Generating code for file Descriptor.h...
Generating code for file Digraph.h...
Generating code for file Edge.h...
Generating code for file Mancude.h...
Generating code for file Node.h...
Generating code for file Priority.h...
Generating code for file Pairlist.h...
Generating code for file Rule1a.h...
Generating code for file Rule1b.h...
Generating code for file Rule2.h...
Generating code for file Rule3.h...
Generating code for file Rule4a.h...
Generating code for file Rule4b.h...
Generating code for file Rule4c.h...
Generating code for file Rule5.h...
Generating code for file Rule5New.h...
Generating code for file Rule6.h...
Generating code for file Rules.h...
Generating code for file SequenceRule.h...
Generating code for file Sort.h...
Generating code for file TooManyNodesException.h...
Generating code for file Conformer.h...
Generating code for file DepictUtils.h...
Generating code for file EmbeddedFrag.h...
Generating code for file RDDepictor.h...
Generating code for file Templates.h...
Generating code for file TemplateSmiles.h...
Generating code for file Deprotect.h...
Generating code for file AtomFeat.h...
Generating code for file AUTOCORR2D.h...
Generating code for file AUTOCORR3D.h...
Generating code for file BCUT.h...
Generating code for file ConnectivityDescriptors.h...
Generating code for file CoulombMat.h...
Generating code for file Crippen.h...
Generating code for file Data3Ddescriptors.h...
Generating code for file EEM.h...
Generating code for file GETAWAY.h...
Generating code for file Lipinski.h...
Generating code for file MolData3Ddescriptors.h...
Generating code for file MolDescriptors.h...
Generating code for file MolDescriptors3D.h...
Generating code for file MolSurf.h...
Generating code for file MORSE.h...
Generating code for file MQN.h...
Generating code for file OxidationNumbers.h...
Generating code for file PBF.h...
Generating code for file PMI.h...
Generating code for file Property.h...
Generating code for file RDF.h...
Generating code for file RegisterDescriptor.h...
Generating code for file USRDescriptor.h...
Generating code for file WHIM.h...
Generating code for file DetermineBonds.h...
Generating code for file BoundsMatrixBuilder.h...
Generating code for file Embedder.h...
Generating code for file CDXMLParser.h...
Generating code for file FileParsers.h...
Generating code for file FileParserUtils.h...
Generating code for file GeneralFileReader.h...
Generating code for file MolFileStereochem.h...
Generating code for file MolSGroupParsing.h...
Generating code for file MolSGroupWriting.h...
Generating code for file MolSupplier.h...
Generating code for file MolWriters.h...
Generating code for file MultithreadedMolSupplier.h...
Generating code for file MultithreadedSDMolSupplier.h...
Generating code for file MultithreadedSmilesMolSupplier.h...
Generating code for file PNGParser.h...
Generating code for file ProximityBonds.h...
Generating code for file SequenceParsers.h...
Generating code for file SequenceWriters.h...
Generating code for file FilterCatalog.h...
Generating code for file FilterCatalogEntry.h...
Generating code for file FilterMatcherBase.h...
Generating code for file FilterMatchers.h...
Generating code for file Filters.h...
Generating code for file FunctionalGroupHierarchy.h...
Generating code for file AtomPairGenerator.h...
Generating code for file AtomPairs.h...
Generating code for file FingerprintGenerator.h...
Generating code for file Fingerprints.h...
Generating code for file FingerprintUtil.h...
Generating code for file MACCS.h...
Generating code for file MHFP.h...
Generating code for file MorganFingerprints.h...
Generating code for file MorganGenerator.h...
Generating code for file RDKitFPGenerator.h...
Generating code for file TopologicalTorsionGenerator.h...
Generating code for file Composition2N.h...
Generating code for file DebugTrace.h...
Generating code for file DuplicatedSeedCache.h...
Generating code for file FMCS.h...
Generating code for file Graph.h...
Generating code for file MatchTable.h...
Generating code for file MaximumCommonSubgraph.h...
Generating code for file RingMatchTableSet.h...
Generating code for file Seed.h...
Generating code for file SeedSet.h...
Generating code for file SubstructMatchCustom.h...
Generating code for file SubstructureCache.h...
Generating code for file Target.h...
Generating code for file TargetMatch.h...
Generating code for file TorsionAngleM6.h...
Generating code for file TorsionPreferences.h...
Generating code for file FFConvenience.h...
Generating code for file AtomTyper.h...
Generating code for file AtomTyper.h...
Generating code for file Builder.h...
Generating code for file Builder.h...
Generating code for file MMFF.h...
Generating code for file UFF.h...
Generating code for file FragCatalogEntry.h...
Generating code for file FragCatalogUtils.h...
Generating code for file FragCatGenerator.h...
Generating code for file FragCatParams.h...
Generating code for file FragFPGenerator.h...
Generating code for file GenericGroups.h...
Generating code for file GraphMol.h...
Generating code for file MMPA.h...
Generating code for file AlignMolecules.h...
Generating code for file O3AAlignMolecules.h...
Generating code for file MolBundle.h...
Generating code for file MolCatalog.h...
Generating code for file MolCatalogEntry.h...
Generating code for file MolCatalogParams.h...
Generating code for file FeatureParser.h...
Generating code for file MolChemicalFeature.h...
Generating code for file MolChemicalFeatureDef.h...
Generating code for file MolChemicalFeatureFactory.h...
Generating code for file AtomSymbol.h...
Generating code for file DrawAnnotation.h...
Generating code for file DrawMol.h...
Generating code for file DrawMolMCH.h...
Generating code for file DrawShape.h...
Generating code for file DrawText.h...
Generating code for file DrawTextCairo.h...
Generating code for file DrawTextFT.h...
Generating code for file DrawTextFTCairo.h...
Generating code for file DrawTextFTJS.h...
Generating code for file DrawTextFTSVG.h...
Generating code for file DrawTextJS.h...
Generating code for file DrawTextNotFT.h...
Generating code for file DrawTextSVG.h...
Generating code for file roboto_regular.h...
Generating code for file telex_regular.h...
Generating code for file MolDraw2D.h...
Generating code for file MolDraw2DCairo.h...
Generating code for file MolDraw2DDetails.h...
Generating code for file MolDraw2DHelpers.h...
Generating code for file MolDraw2DJS.h...
Generating code for file MolDraw2DSVG.h...
Generating code for file MolDraw2DUtils.h...
Generating code for file MolDraw2Dwx.h...
Generating code for file DrawTextFTQt.h...
Generating code for file DrawTextQt.h...
Generating code for file MolDraw2DQt.h...
Generating code for file StringRect.h...
Generating code for file LinkNode.h...
Generating code for file MolEnumerator.h...
Generating code for file mf.h...
Generating code for file MolHash.h...
Generating code for file nmmolhash.h...
Generating code for file details.h...
Generating code for file details.h...
Generating code for file MolInterchange.h...
Generating code for file MolOps.h...
Generating code for file MolPickler.h...
Generating code for file AcidBaseCatalogEntry.h...
Generating code for file AcidBaseCatalogParams.h...
Generating code for file AcidBaseCatalogUtils.h...
Generating code for file Charge.h...
Generating code for file Fragment.h...
Generating code for file FragmentCatalogEntry.h...
Generating code for file FragmentCatalogParams.h...
Generating code for file FragmentCatalogUtils.h...
Generating code for file Metal.h...
Generating code for file MolStandardize.h...
Generating code for file Normalize.h...
Generating code for file Tautomer.h...
Generating code for file Tautomer.h...
Generating code for file TautomerCatalogEntry.h...
Generating code for file TautomerCatalogParams.h...
Generating code for file TautomerCatalogUtils.h...
Generating code for file TransformCatalogEntry.h...
Generating code for file TransformCatalogParams.h...
Generating code for file TransformCatalogUtils.h...
Generating code for file Validate.h...
Generating code for file MolTransforms.h...
Generating code for file MonomerInfo.h...
Generating code for file new_canon.h...
Generating code for file GasteigerCharges.h...
Generating code for file GasteigerParams.h...
Generating code for file PeriodicTable.h...
Generating code for file QueryAtom.h...
Generating code for file QueryBond.h...
Generating code for file QueryOps.h...
Generating code for file RDKitBase.h...
Generating code for file RDKitQueries.h...
Generating code for file ReducedGraphs.h...
Generating code for file Resonance.h...
Generating code for file RGroupCore.h...
Generating code for file RGroupData.h...
Generating code for file RGroupDecomp.h...
Generating code for file RGroupDecompData.h...
Generating code for file RGroupDecompParams.h...
Generating code for file RGroupFingerprintScore.h...
Generating code for file RGroupGa.h...
Generating code for file RGroupMatch.h...
Generating code for file RGroupScore.h...
Generating code for file RGroupUtils.h...
Generating code for file RingInfo.h...
Generating code for file Rings.h...
Generating code for file ROMol.h...
Generating code for file RWMol.h...
Generating code for file SanitException.h...
Generating code for file detail.h...
Generating code for file ScaffoldNetwork.h...
Generating code for file ShapeEncoder.h...
Generating code for file ShapeUtils.h...
Generating code for file SLNAttribs.h...
Generating code for file SLNParse.h...
Generating code for file SLNParseOps.h...
Generating code for file primes.h...
Generating code for file SmartsWrite.h...
Generating code for file SmilesParse.h...
Generating code for file SmilesParseOps.h...
Generating code for file SmilesWrite.h...
Generating code for file StereoGroup.h...
Generating code for file Pattern.h...
Generating code for file ReCharge.h...
Generating code for file Stereo.h...
Generating code for file StripSmallFragments.h...
Generating code for file StructChecker.h...
Generating code for file StructCheckerOptions.h...
Generating code for file Utilites.h...
Generating code for file Subgraphs.h...
Generating code for file SubgraphUtils.h...
Generating code for file SubstanceGroup.h...
Generating code for file SubstructMatch.h...
Generating code for file SubstructUtils.h...
Generating code for file PatternFactory.h...
Generating code for file SubstructLibrary.h...
Generating code for file SubstructLibrarySerialization.h...
Generating code for file TautomerQuery.h...
Generating code for file Snapshot.h...
Generating code for file Trajectory.h...
Generating code for file CorrMatGenerator.h...
Generating code for file InfoBitRanker.h...
Generating code for file InfoGainFuncs.h...
Generating code for file AlignPoints.h...
Generating code for file Conrec.h...
Generating code for file PowerEigenSolver.h...
Generating code for file Matrix.h...
Generating code for file BFGSOpt.h...
Generating code for file SquareMatrix.h...
Generating code for file SymmMatrix.h...
Generating code for file Vector.h...
Generating code for file AndQuery.h...
Generating code for file EqualityQuery.h...
Generating code for file GreaterEqualQuery.h...
Generating code for file GreaterQuery.h...
Generating code for file LessEqualQuery.h...
Generating code for file LessQuery.h...
Generating code for file NullQueryAlgebra.h...
Generating code for file OrQuery.h...
Generating code for file Query.h...
Generating code for file QueryObjects.h...
Generating code for file RangeQuery.h...
Generating code for file SetQuery.h...
Generating code for file XOrQuery.h...
Generating code for file boost_numpy.h...
Generating code for file import_array.h...
Generating code for file pyint_api.h...
Generating code for file PySequenceHolder.h...
Generating code for file python.h...
Generating code for file python_streambuf.h...
Generating code for file BadFileException.h...
Generating code for file BoostEndInclude.h...
Generating code for file BoostStartInclude.h...
Generating code for file ConcurrentQueue.h...
Generating code for file Dict.h...
Generating code for file Exceptions.h...
Generating code for file export.h...
Generating code for file FileParseException.h...
Generating code for file hanoiSort.h...
Generating code for file Invariant.h...
Generating code for file LocaleSwitcher.h...
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Generating code /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:188: warning: found </tt> at different nesting level (7) than expected (4)
/<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:189: warning: end of comment block while expecting command </tt>
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Generating docs for file/<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h:95: warning: The following parameter of DistGeom::constructForceField(const BoundsMatrix &mmat, RDGeom::PointPtrVect &positions, const VECT_CHIRALSET &csets, double weightChiral=1.0, double weightFourthDim=0.1, std::map< std::pair< int, int >, double > *extraWeights=nullptr, double basinSizeTol=5.0, boost::dynamic_bitset<> *fixedPts=nullptr) is not documented:
  parameter 'fixedPts'
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:144: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:31: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:31: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:28: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:28: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:28: warning: The following parameters of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:28: warning: The following parameter of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) is not documented:
  parameter 'mmffBondParams'
 pyint_api.h...
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Generating docs /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:54: warning: The following parameters of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, double chargeTerm, std::uint8_t dielModel, bool is1_4) are not documented:
  parameter 'chargeTerm'
  parameter 'dielModel'
  parameter 'is1_4'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h:29: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::MMFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:32: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:32: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:31: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:31: warning: The following parameter of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) is not documented:
  parameter 'mmffTorParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:30: warning: The following parameter of ForceFields::MMFF::VdWContrib::VdWContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, const MMFFVdWRijstarEps *mmffVdWConstants) is not documented:
  parameter 'mmffVdWConstants'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:28: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:28: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:28: warning: The following parameters of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h:27: warning: The following parameter of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) is not documented:
  parameter 'oobForceScalingFactor'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h:29: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::UFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
for compound ForceFields::MMFF::EleContrib...
Generating docs for compound ForceFields::MMFF::MMFFAngle...
Generating docs for compound ForceFields::MMFF::MMFFAngleCollection...
Generating docs for compound ForceFields::MMFF::MMFFAromCollection...
Generating docs for compound ForceFields::MMFF::MMFFBndkCollection...
Generating docs for compound ForceFields::MMFF::MMFFBond...
Generating docs for compound ForceFields::MMFF::MMFFBondCollection...
Generating docs for compound ForceFields::MMFF::MMFFChg...
Generating docs for compound ForceFields::MMFF::MMFFChgCollection...
Generating docs for compound ForceFields::MMFF::MMFFCovRadPauEle...
Generating docs for compound ForceFields::MMFF::MMFFCovRadPauEleCollection...
Generating docs for compound ForceFields::MMFF::MMFFDef...
Generating docs for compound ForceFields::MMFF::MMFFDefCollection...
Generating docs for compound ForceFields::MMFF::MMFFDfsbCollection...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurie...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurieCollection...
Generating docs for compound ForceFields::MMFF::MMFFOop...
Generating docs for compound ForceFields::MMFF::MMFFOopCollection...
Generating docs for compound ForceFields::MMFF::MMFFPBCI...
Generating docs for compound ForceFields::MMFF::MMFFPBCICollection...
Generating docs for compound ForceFields::MMFF::MMFFProp...
Generating docs for compound ForceFields::MMFF::MMFFPropCollection...
Generating docs for compound ForceFields::MMFF::MMFFStbn...
Generating docs for compound ForceFields::MMFF::MMFFStbnCollection...
Generating docs for compound ForceFields::MMFF::MMFFTor...
Generating docs for compound ForceFields::MMFF::MMFFTorCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdW...
Generating docs for compound ForceFields::MMFF::MMFFVdWCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdWRijstarEps...
Generating docs for compound ForceFields::MMFF::OopBendContrib...
Generating docs for compound ForceFields::MMFF::PositionConstraintContrib...
Generating docs for compound ForceFields::MMFF::StretchBendContrib...
Generating docs for compound ForceFields::MMFF::TorsionAngleContrib...
Generating docs for compound ForceFields::MMFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::MMFF::VdWContrib...
Generating docs for namespace ForceFields::MMFF::Utils
Generating docs for namespace ForceFields::UFF
Generating docs for compound ForceFields::UFF::AngleBendContrib...
Generating docs for compound ForceFields::UFF::AngleConstraintContrib...
Generating docs for compound ForceFields::UFF::AtomicParams...
Generating docs for compound ForceFields::UFF::BondStretchContrib...
Generating docs for compound ForceFields::UFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::UFF::InversionContrib...
Generating docs for compound ForceFields::UFF::ParamCollection...
Generating docs for compound ForceFields::UFF::PositionConstraintContrib...
Generating docs for compound ForceFields::UFF::TorsionAngleContrib...
Generating docs for compound ForceFields::UFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::UFF::UFFAngle...
Generating docs for compound ForceFields::UFF::UFFBond...
Generating docs for compound ForceFields::UFF::UFFInv...
Generating docs for compound ForceFields::UFF::UFFTor...
Generating docs for compound ForceFields::UFF::UFFVdW...
Generating docs for compound ForceFields::UFF::vdWContrib...
Generating docs for namespace ForceFields::UFF::Params
Generating docs for namespace ForceFields::UFF::Utils
Generating docs for namespace Invar
Generating docs for compound Invar::Invariant...
Generating docs for namespace MolTransforms
Generating docs for namespace Queries
Generating docs for compound Queries::AndQuery...
Generating docs for compound Queries::EqualityQuery...
Generating docs for compound Queries::GreaterEqualQuery...
Generating docs for compound Queries::GreaterQuery...
Generating docs for compound Queries::Int2Type...
Generating docs for compound Queries::LessEqualQuery...
Gene/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:287: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=nullptr, bool acceptFailure=false, bool forceRDKit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:287: warning: The following parameter of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=nullptr, bool acceptFailure=false, bool forceRDKit=false) is not documented:
  parameter 'referencePattern'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:525: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:534: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:278: warning: The following parameter of RDKit::addSubstanceGroup(ROMol &mol, SubstanceGroup sgroup) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.h:42: warning: argument 'fileName' of command @param is not found in the argument list of RDKit::CDXMLFileToMols(const std::string &filename, bool sanitize=true, bool removeHs=true)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/CDXMLParser.h:42: warning: The following parameter of RDKit::CDXMLFileToMols(const std::string &filename, bool sanitize=true, bool removeHs=true) is not documented:
  parameter 'filename'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:105: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:105: warning: The following parameter of RDKit::HELMToMol(const char *helm, bool sanitize=true) is not documented:
  parameter 'helm'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:69: warning: The following parameter of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=nullptr, ExplicitBitVect *setOnlyBits=nullptr, bool branchedPaths=true, const std::vector< std::uint32_t > *fromAtoms=nullptr) is not documented:
  parameter 'fromAtoms'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:525: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:534: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:51: warning: argument 'line' from the argument list of RDKit::MolDataStreamToMol has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:161: warning: argument 'doRandom' of command @param is not found in the argument list of RDKit::MolFragmentToSmiles(const ROMol &mol, const std::vector< int > &atomsToUse, const std::vector< int > *bondsToUse=nullptr, const std::vector< std::string > *atomSymbols=nullptr, const std::vector< std::string > *bondSymbols=nullptr, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:210: warning: The following parameter of RDKit::MolToCXSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) is not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:341: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:341: warning: The following parameter of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) is not documented:
  parameter 'fname'
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:101: warning: The following parameter of RDKit::MolToSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) is not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:120: warning: The following parameter of RDKit::PatternFingerprintMol(const ROMol &mol, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=nullptr, ExplicitBitVect *setOnlyBits=nullptr, bool tautomericFingerprint=false) is not documented:
  parameter 'tautomericFingerprint'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:27: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=nullptr, const std::vector< std::uint32_t > *fromAtoms=nullptr, std::vector< std::vector< std::uint32_t > > *atomBits=nullptr, std::map< std::uint32_t, std::vector< std::vector< int > > > *bitInfo=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:27: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=nullptr, const std::vector< std::uint32_t > *fromAtoms=nullptr, std::vector< std::vector< std::uint32_t > > *atomBits=nullptr, std::map< std::uint32_t, std::vector< std::vector< int > > > *bitInfo=nullptr) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:93: warning: The following parameter of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) is not documented:
  parameter 'product'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h:114: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:66: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:66: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:75: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:75: warning: The following parameter of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:88: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:88: warning: The following parameter of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:143: warning: The following parameter of RDKit::SubstructMatch(T1 &mol, const T2 &query, std::vector< MatchVectType > &matchVect, bool uniquify=true, bool recursionPossible=true, bool useChirality=false, bool useQueryQueryMatches=false, unsigned int maxMatches=1000, int numThreads=1) is not documented:
  parameter 'numThreads'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:123: warning: The following parameters of RDKit::AtomEnvironment::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const=0 are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:219: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:219: warning: The following parameter of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const is not documented:
  parameter 'numProducts'
rating docs for compound Queries::LessQuery...
Generating docs for compound Queries::OrQuery...
Generating docs for compound Queries::Query...
Generating docs for compound Queries::RangeQuery...
Generating docs for compound Queries::SetQuery...
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Generating docs for namespace Rankers
Generating docs for namespace RDCatalog
Generating docs for compound RDCatalog::Catalog...
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Generating docs for nested compound RDCatalog::HierarchCatalog::vertex_entry_t...
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Generating docs for compound RDDataManip::MetricMatrixCalc...
Generating docs for namespace RDDepict
Generating docs for compound RDDepict::Compute2DCoordParameters...
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Generating docs for namespace RDFeatures
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Generating docs for namespace RDInfoTheory
Generating docs for compound RDInfoTheory::BitCorrMatGenerator...
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Generating docs for namespace RDKit
Generating docs for compound RDKit::AdditionalOutput...
Generating docs for compound RDKit::AromaticAtomIterator_...
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Generating docs for compound RDK/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:430: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 101 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: The following parameter of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: The following parameter of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:71: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecule has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:71: warning: The following parameter of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=nullptr, const std::map< int, DrawColour > *highlight_bond_map=nullptr, const std::map< int, double > *highlight_radii=nullptr, int confId=-1) is not documented:
  parameter 'highlight_bonds'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:145: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:145: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:145: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:145: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecules has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:145: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int > > *highlight_atoms=nullptr, const std::vector< std::vector< int > > *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=nullptr, const std::vector< std::map< int, double > > *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
it::DataStructsExplicitBitVecPropHandler...
Generating docs for compound RDKit::Dict...
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Generating docs for compound RDKit::DrawColour...
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Generating docs for compound RDKit::EnumerateLibraryBase...
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Generating docs for compound RDKit::EnumerationStrategyException...
Generating docs for compound RDKit::EvenSamplePairsStrategy...
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Generating docs for compound RDKit::FeatureFileParseException...
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Generating docs for compound RDKit::FilterCatalog...
Generating docs for compound RDKit::FilterCatalogEntry...
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Generating docs for compound RDKit::FilterData_t...
Generating docs for compound RDKit::FilterHierarchyMatcher...
Generating docs for compound RDKit::FilterMatch...
Generating docs for compound RDKit::FilterMatcherBase...
Generating docs for compound RDKit::FilterProperty_t...
Generating docs for compound RDKit::FingerprintArguments...
Generating docs for compound RDKit::FingerprintFuncArguments...
Generating docs for compound RDKit::FingerprintGenerator...
Generating docs for compound RDKit::FingerprintVarianceScoreData...
Generating docs for compound RDKit::FixedMolSizeMolBundle...
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Generating docs for compound RDKit::FragCatalogEntry...
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Generating docs for compound RDKit::FragFPGenerator...
Generating docs for compound RDKit::GaResult...
Generating docs for compound RDKit::GasteigerParams...
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Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, ExplicitBitVect >...
Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, std::string >...
Generating docs for compound RDKit::HeteroatomIterator_...
Generating docs for compound RDKit::KekulizeException...
Generating docs for compound RDKit::KeyFromPropHolder...
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Generating docs for compound RDKit::ltDouble...
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Generating docs for compound RDKit::MCSResult...
Generating docs for compound RDKit::MolBundle...
Generating docs for compound RDKit::MolCatalogEntry...
Generating docs for compound RDKit::MolCatalogParams...
Generating docs for compound RDKit::MolChemicalFeature...
Generating docs for compound RDKit::MolChemicalFeatureDef...
Generating docs for compound RDKit::MolChemicalFeatureFactory...
Generating docs for compound RDKit::MolDraw2D...
Generating docs for compound RDKit::MolDraw2DCairo...
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Generating docs for compound RDKit::MolDraw2DQt...
Generating docs for compound RDKit::MolDraw2DSVG...
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Generating docs for compound RDKit::MolDrawOptions...
Generating docs for compound RDKit::MolFileUnhandledFeatureException...
Generating docs for compound RDKit::MolHolder...
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Generating docs for compound RDKit::MolMatchFinalCheckFunctor...
Generating docs for compound RDKit::MolPickler...
Generating docs for compound RDKit::MolPickler/<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h:114: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:336: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 101 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: The following parameter of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Abbreviations.h:104: warning: The following parameter of RDKit::Abbreviations::findApplicableAbbreviationMatches(const ROMol &mol, const std::vector< AbbreviationDefinition > &abbrevs, double maxCoverage=0.4) is not documented:
  parameter 'mol'
Exception...
Generating docs for compound RDKit::MolSanitizeException...
Generating docs for compound RDKit::MolSupplier...
Generating docs for compound RDKit::MolWriter...
Generating docs for compound RDKit::MolzipParams...
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Generating docs for compound RDKit::PatternHolder...
Generating docs for compound RDKit::PDBMolSupplier...
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Generating docs for compound RDKit::PeriodicTable...
Generating docs for compound RDKit::QueryAtom...
Generating docs for compound RDKit::QueryAtomIterator_...
Generating docs for compound RDKit::QueryBond...
Generating docs for compound RDKit::RandomSampleAllBBsStrategy...
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Generating docs for compound RDKit::RCore...
Generating docs for compound RDKit::RDAny...
Generating docs for compound RDKit::RDProps...
Generating docs for compound RDKit::RDValue...
Generating docs for compound RDKit::ReactionFingerprintParams...
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Generating docs for compound RDKit::ReactionPicklerException...
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Generating docs for compound RDKit::ResonanceMolSupplier...
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Generating docs for nested compound RDKit::RGroupDecompData::UsedLabels...
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Generating docs for compound RDKit::RingInfo...
Generating docs for compound RDKit::ROMol...
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Generating docs for compound RDKit::SLNParseException...
Generating docs for compound RDKit::SmartsMatcher...
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Generating docs for compound RDKit::SmilesMolSupplier...
Generating docs for compound RDKit::SmilesParseException...
Generating docs for compound RDKit::SmilesParserParams...
Generating docs for compound RDKit::SmilesWriteParams...
Generating docs for compound RDKit::SmilesWriter...
Generating docs for compound RDKit::Snapshot...
Generating docs for compound RDKit::SparseIntVect...
Generating docs for compound RDKit::StereoBondThresholds...
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Generating docs for nested compound RDKit::SubstanceGroup::AttachPoint...
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Generating docs for compound RDKit::TautomerPatternHolder...
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Generating docs for compound RDKit::UnimplementedFPException...
Generating docs for compound RDKit::UsedLabelMap...
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Generating docs for namespace RDKit::Abbreviations
Generating docs for compound RDKit::Abbreviations::AbbreviationDefinition...
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Generating docs for namespace RDKit::Abbreviations::common_properties
Generating docs for namespace RDKit::Abbreviations::Utils
Generating docs for namespace RDKit::AtomPair
Genera/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:123: warning: The following parameters of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h:95: warning: The following parameter of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< std::uint32_t > *fromAtoms=nullptr, const std::vector< std::uint32_t > *ignoreAtoms=nullptr, const std::vector< std::uint32_t > *atomInvariants=nullptr, bool includeChirality=false, bool use2D=true, int confId=-1) is not documented:
  parameter 'confId'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h:75: warning: The following parameter of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) is not documented:
  parameter 'includeChirality'
/<<PKGBUILDDIR>>/Code/GraphMol/Canon.h:103: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=nullptr, const std::vector< std::string > *bondSymbols=nullptr, bool doIsomericSmiles=false, bool doRandom=false) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h:132: warning: The following parameter of RDKit::Chirality::findPotentialStereo(ROMol &mol, bool cleanIt, bool flagPossible=true) is not documented:
  parameter 'flagPossible'
/<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h:184: warning: The following parameter of RDKit::Chirality::getTrigonalBipyramidalAxialBond(const Atom *center, int which=0) is not documented:
  parameter 'center'
/<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/CIPLabeler.h:44: warning: The following parameter of RDKit::CIPLabeler::assignCIPLabels(ROMol &mol, unsigned int maxRecursiveIterations=0) is not documented:
  parameter 'maxRecursiveIterations'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:45: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:45: warning: The following parameter of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) is not documented:
  parameter 'useStrictDefinition'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h:68: warning: The following parameter of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int > > &atomIds, int confId=-1) is not documented:
  parameter 'atomIds'
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:37: warning: The following parameter of RDKit::DGeomHelpers::setTopolBounds(const ROMol &mol, DistGeom::BoundsMatPtr mmat, bool set15bounds=true, bool scaleVDW=false, bool useMacrocycle14config=false, bool forceTransAmides=true) is not documented:
  parameter 'forceTransAmides'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:98: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 101 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: The following parameter of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:218: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 101 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: The following parameter of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
ting docs for compound RDKit::AtomPair::AtomPairArguments...
Generating docs for compound RDKit::AtomPair::AtomPairAtomEnv...
Generating docs for compound RDKit::AtomPair::AtomPairAtomInvGenerator...
Generating docs for compound RDKit::AtomPair::AtomPairEnvGenerator...
Generating docs for namespace RDKit::AtomPairs
Generating docs for namespace RDKit::Canon
Generating docs for compound RDKit::Canon::AtomCompareFunctor...
Generating docs for compound RDKit::Canon::bondholder...
Generating docs for compound RDKit::Canon::canon_atom...
Generating docs for compound RDKit::Canon::ChiralAtomCompareFunctor...
Generating docs for compound RDKit::Canon::MolStackElem...
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Generating docs for compound RDKit::Canon::SpecialChiralityAtomCompareFunctor...
Generating docs for compound RDKit::Canon::SpecialSymmetryAtomCompareFunctor...
Generating docs for namespace RDKit::Canon::detail
Generating docs for namespace RDKit::Chirality
Generating docs for compound RDKit::Chirality::BondWedgingParameters...
Generating docs for compound RDKit::Chirality::StereoInfo...
Generating docs for namespace RDKit::Chirality::detail
Generating docs for namespace RDKit::CIPLabeler
Generating docs for compound RDKit::CIPLabeler::CIPMol...
Generating docs for compound RDKit::CIPLabeler::CIPMolSpan...
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Generating docs for compound RDKit::CIPLabeler::SequenceRule...
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Generating docs for compound RDKit::CIPLabeler::Tetrahedral...
Generating docs for compound RDKit::CIPLabeler::TooManyNodesException...
Generating docs for namespace RDKit::CIPLabeler_detail
Generating docs for namespace RDKit::common_properties
Generating docs for namespace RDKit::constants
Generating docs for namespace RDKit::Deprotect
Generating docs for compound RDKit::Deprotect::DeprotectData...
Generating docs for namespace RDKit::Descriptors
Generating docs for compound RDKit::Descriptors::CrippenParamCollection...
Generating docs for compound RDKit::Descriptors::CrippenParams...
Generating docs for compound RDKit::Descriptors::Properties...
Generating docs for compound RDKit::Descriptors::PropertyFunctor...
Generating docs for namespace RDKit::Descriptors::detail
Generating docs for namespace RDKit::detail
Generating docs for namespace RDKit::details
Generating docs for namespace RDKit::DGeomHelpers
Generating docs for compound RDKit::DGeomHelpers::EmbedParameters...
Generating docs for namespace RDKit::DTags
Generating docs for namespace RDKit::EnumerationStrategyPickler
Generating docs for namespace RDKit::EnumerationTypes
Generating docs for namespace RDKit::FileParserUtils
Generating docs for namespace RDKit::FilterMatchOps
Generating docs for compound RDKit::FilterMatchOps::And...
Generating docs for compound RDKit::FilterMatchOps::Not...
Generating docs for compound RDKit::FilterMatchOps::Or/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:161: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 101 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:101: warning: The following parameter of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:102: warning: found </tt> tag without matching <tt>
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:93: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::CreateShingling(const ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=false, unsigned char min_radius=1) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:141: warning: found </tt> tag without matching <tt>
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:132: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::Encode(ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=false, unsigned char min_radius=1) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:191: warning: found </tt> tag without matching <tt>
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:183: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::EncodeSECFP(ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=false, unsigned char min_radius=1, size_t length=2048) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:23: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:44: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:147: warning: argument 'trans' of command @param is not found in the argument list of RDKit::MolAlign::getBestRMS(ROMol &prbMol, const ROMol &refMol, int prbCid=-1, int refCid=-1, const std::vector< MatchVectType > &map=std::vector< MatchVectType >(), int maxMatches=1e6, bool symmetrizeConjugatedTerminalGroups=true, const RDNumeric::DoubleVector *weights=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/AtomSymbol.h:38: warning: The following parameters of RDKit::MolDraw2D_detail::AtomSymbol::AtomSymbol(const std::string &symbol, int atIdx, OrientType orient, const Point2D &cds, const DrawColour &colour, DrawText &textDrawer) are not documented:
  parameter 'atIdx'
  parameter 'cds'
  parameter 'colour'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h:45: warning: argument 'highlightRadii' of command @param is not found in the argument list of RDKit::MolDraw2D_detail::DrawMol::DrawMol(const ROMol &mol, const std::string &legend, int width, int height, const MolDrawOptions &drawOptions, DrawText &textDrawer, const std::vector< int > *highlightAtoms=nullptr, const std::vector< int > *highlightBonds=nullptr, const std::map< int, DrawColour > *highlightAtomMap=nullptr, const std::map< int, DrawColour > *highlightBondMap=nullptr, const std::vector< std::pair< DrawColour, DrawColour > > *bondColours=nullptr, const std::map< int, double > *highlight_radii=nullptr, bool includeAnnotations=true, int confId=-1, bool isReactionMol=false)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMol.h:45: warning: The following parameters of RDKit::MolDraw2D_detail::DrawMol::DrawMol(const ROMol &mol, const std::string &legend, int width, int height, const MolDrawOptions &drawOptions, DrawText &textDrawer, const std::vector< int > *highlightAtoms=nullptr, const std::vector< int > *highlightBonds=nullptr, const std::map< int, DrawColour > *highlightAtomMap=nullptr, const std::map< int, DrawColour > *highlightBondMap=nullptr, const std::vector< std::pair< DrawColour, DrawColour > > *bondColours=nullptr, const std::map< int, double > *highlight_radii=nullptr, bool includeAnnotations=true, int confId=-1, bool isReactionMol=false) are not documented:
  parameter 'bondColours'
  parameter 'highlight_radii'
  parameter 'includeAnnotations'
  parameter 'isReactionMol'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.h:28: warning: argument 'highlightRadii' of command @param is not found in the argument list of RDKit::MolDraw2D_detail::DrawMolMCH::DrawMolMCH(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/DrawMolMCH.h:28: warning: The following parameter of RDKit::MolDraw2D_detail::DrawMolMCH::DrawMolMCH(const ROMol &mol, const std::string &legend, int width, int height, MolDrawOptions &drawOptions, DrawText &textDrawer, const std::map< int, std::vector< DrawColour > > &highlight_atom_map, const std::map< int, std::vector< DrawColour > > &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1) is not documented:
  parameter 'highlight_radii'
...
Generating docs for namespace RDKit::FMCS
Generating docs for compound RDKit::FMCS::Composition2N...
Generating docs for compound RDKit::FMCS::DuplicatedSeedCache...
Generating docs for nested compound RDKit::FMCS::DuplicatedSeedCache::TKey...
Generating docs for compound RDKit::FMCS::ExecStatistics...
Generating docs for compound RDKit::FMCS::Graph...
Generating docs for compound RDKit::FMCS::MaximumCommonSubgraph...
Generating docs for compound RDKit::FMCS::MolFragment...
Generating docs for compound RDKit::FMCS::NewBond...
Generating docs for compound RDKit::FMCS::RingMatchTableSet...
Generating docs for compound RDKit::FMCS::Seed...
Generating docs for compound RDKit::FMCS::SeedSet...
Generating docs for compound RDKit::FMCS::SubstructureCache...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::HashKey...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::KeyNumericMetrics...
Generating docs for compound RDKit::FMCS::Target...
Generating docs for compound RDKit::FMCS::TargetMatch...
Generating docs for compound RDKit::FMCS::TArray2D...
Generating docs for namespace RDKit::ForceFieldsHelper
Generating docs for namespace RDKit::ForceFieldsHelper::detail
Generating docs for namespace RDKit::GeneralMolSupplier
Generating docs for compound RDKit::GeneralMolSupplier::SupplierOptions...
Generating docs for namespace RDKit::GenericGroups
Generating docs for namespace RDKit::GenericGroups::Matchers
Generating docs for namespace RDKit::Local
Generating docs for namespace RDKit::MACCSFingerprints
Generating docs for namespace RDKit::MHFPFingerprints
Generating docs for compound RDKit::MHFPFingerprints::MHFPEncoder...
Generating docs for namespace RDKit::MHFPFingerprints::FNV
Generating docs for namespace RDKit::MMFF
Generating docs for compound RDKit::MMFF::MMFFAtomProperties...
Generating docs for compound RDKit::MMFF::MMFFMolProperties...
Generating docs for namespace RDKit::MMFF::DefaultParameters
Generating docs for namespace RDKit::MMFF::Tools
Generating docs for compound RDKit::MMFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::MMPA
Generating docs for namespace RDKit::MolAlign
Generating docs for compound RDKit::MolAlign::LAP...
Generating docs for compound RDKit::MolAlign::MolAlignException...
Generating docs for compound RDKit::MolAlign::MolHistogram...
Generating docs for compound RDKit::MolAlign::O3A...
Generating docs for compound RDKit::MolAlign::O3AConstraint...
Generating docs for compound RDKit::MolAlign::O3AConstraintVect...
Generating docs for compound RDKit::MolAlign::O3AFuncData...
Generating docs for compound RDKit::MolAlign::SDM...
Generating docs for namespace RDKit::MolDraw2D_detail
Generating docs for compound RDKit::MolDraw2D_detail::AtomSymbol...
Generating docs for compound RDKit::MolDraw2D_detail::DrawAnnotation...
Generating docs for compound RDKit::MolDraw2D_detail::DrawMol...
Generating docs for compound RDKit::MolDraw2D_detail::DrawMolMCH...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShape...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeArc...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeArrow...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeDashedWedge...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeEllipse...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapePolyLine...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeSimpleLine...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeSolidWedge...
Generating docs for compound RDKit::MolDraw2D_detail::DrawShapeWavyLine...
Generating docs for compound RDKit::MolDraw2D_detail::DrawText...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextCairo...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFT...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTCairo...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTJS...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextFTQt...
Generating docs for compou/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:256: warning: The following parameter of RDKit::MolEnumerator::enumerate(const ROMol &mol, size_t maxPerOperation=0) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:131: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:134: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:138: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:141: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:141: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:131: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:138: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:134: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:76: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:79: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:83: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:86: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:86: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:76: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:83: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:79: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:200: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:203: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:207: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:210: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:210: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:200: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:207: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/MolEnumerator.h:203: warning: Found unknown command '\override'
/<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h:81: warning: The following parameter of RDKit::MolInterchange::MolsToJSONData(const std::vector< T > &mols, const JSONWriteParameters &params=defaultJSONWriteParameters) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h:90: warning: The following parameter of RDKit::MolInterchange::MolToJSONData(const T &mol, const JSONWriteParameters &params=defaultJSONWriteParameters) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:787: warning: The following parameter of RDKit::MolOps::getAdjacencyMatrix(const ROMol &mol, bool useBO=false, int emptyVal=0, bool force=false, const char *propNamePrefix=nullptr, const boost::dynamic_bitset<> *bondsToUse=nullptr) is not documented:
  parameter 'bondsToUse'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:281: warning: The following parameters of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false, bool mergeIsotopes=false) are not documented:
  parameter 'mergeUnmappedOnly'
  parameter 'mergeIsotopes'
nd RDKit::MolDraw2D_detail::DrawTextFTSVG...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextJS...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextNotFT...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextQt...
Generating docs for compound RDKit::MolDraw2D_detail::DrawTextSVG...
Generating docs for compound RDKit::MolDraw2D_detail::StringRect...
Generating docs for namespace RDKit::MolDraw2DUtils
Generating docs for compound RDKit::MolDraw2DUtils::ContourParams...
Generating docs for namespace RDKit::MolEnumerator
Generating docs for compound RDKit::MolEnumerator::LinkNode...
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Generating docs for compound RDKit::MolEnumerator::MolEnumeratorOp...
Generating docs for compound RDKit::MolEnumerator::MolEnumeratorParams...
Generating docs for compound RDKit::MolEnumerator::PositionVariationOp...
Generating docs for compound RDKit::MolEnumerator::RepeatUnitOp...
Generating docs for namespace RDKit::MolEnumerator::detail
Generating docs for namespace RDKit::MolEnumerator::utils
Generating docs for namespace RDKit::MolFragmenter
Generating docs for compound RDKit::MolFragmenter::FragmenterBondType...
Generating docs for namespace RDKit::MolHash
Generating docs for namespace RDKit::MolInterchange
Generating docs for compound RDKit::MolInterchange::JSONParseParameters...
Generating docs for compound RDKit::MolInterchange::JSONWriteParameters...
Generating docs for namespace RDKit::MolOps
Generating docs for compound RDKit::MolOps::AdjustQueryParameters...
Generating docs for compound RDKit::MolOps::RemoveHsParameters...
Generating docs for namespace RDKit::MolOps::details
Generating docs for namespace RDKit::MolShapes
Generating docs for namespace RDKit::MolStandardize
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
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Generating docs for compound RDKit::MolStandardize::AllowedAtomsValidation...
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Generating docs for compound RDKit::MolStandardize::TautomerCatalogEntry...
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Generating docs for nested compound RDKit::MolStandardize::TautomerEnumeratorResult::const_iterator...
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Generating docs for compound RD/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:204: warning: argument 'countSimulation' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:204: warning: argument 'includeChirality' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:204: warning: argument 'onlyNonzeroInvariants' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:262: warning: argument 'countSimulation' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:262: warning: argument 'includeChirality' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:262: warning: argument 'onlyNonzeroInvariants' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:123: warning: The following parameters of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h:117: warning: The following parameter of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< boost::uint32_t > *invariants=nullptr, const std::vector< boost::uint32_t > *fromAtoms=nullptr, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=nullptr, bool includeRedundantEnvironments=false) is not documented:
  parameter 'nBits'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:123: warning: The following parameters of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
/<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:26: warning: The following parameter of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<> > *atomTypes=nullptr) is not documented:
  parameter 'atomTypes'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:127: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:127: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:94: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(bool includeChirality=false, uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, bool countSimulation=true, std::uint32_t fpSize=2048, std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, bool ownsAtomInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:94: warning: The following parameter of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(bool includeChirality=false, uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, bool countSimulation=true, std::uint32_t fpSize=2048, std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, bool ownsAtomInvGen=false) is not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:32: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:32: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) is not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:68: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::TopologicalTorsionAtomEnv(OutputType bitId, INT_VECT atomPath) is not documented:
  parameter 'atomPath'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:123: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, AdditionalOutput *AdditionalOutput, const bool hashResults=false, const std::uint64_t fpSize=0) const are not documented:
  parameter 'AdditionalOutput'
  parameter 'fpSize'
Kit::MolStandardize::TransformCatalogEntry...
Generating docs for compound RDKit::MolStandardize::TransformCatalogParams...
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Generating docs for namespace RDKit::MorganFingerprint
Generating docs for compound RDKit::MorganFingerprint::MorganArguments...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomEnv...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganBondInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganEnvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganFeatureAtomInvGenerator...
Generating docs for namespace RDKit::MorganFingerprints
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Generating docs for compound RDKit::ScaffoldNetwork::NetworkEdge...
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Generating docs for compound RDKit::SLNParse::AttribType...
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Generating docs for compound RDKit::StructureCheck::AugmentedAtom...
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Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionArguments...
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Generatin/<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h:48: warning: The following parameter of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const is not documented:
  parameter 'distMat'
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:48: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:48: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:87: warning: The following parameters of RDPickers::LeaderPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize, const RDKit::INT_VECT &firstPicks, double threshold, int nthreads) const are not documented:
  parameter 'threshold'
  parameter 'nthreads'
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:44: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:44: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
g docs for namespace RDNumeric
Generating docs for compound RDNumeric::Matrix...
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lookup cache used 20441/65536 hits=160039 misses=23876
finished...
(cd /<<PKGBUILDDIR>>/Docs/Book; RDBASE=/<<PKGBUILDDIR>> /usr/bin/make html)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book'
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Running Sphinx v5.3.0
WARNING: html_static_path entry '_static' does not exist
myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
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/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:731: WARNING: duplicate label license, other instance in /<<PKGBUILDDIR>>/Docs/Book/BackwardsIncompatibleChanges.md
/<<PKGBUILDDIR>>/Docs/Book/Cookbook.rst:1733: WARNING: Title underline too short.

Contiguous Rotatable Bonds
=========================
/<<PKGBUILDDIR>>/Docs/Book/Cookbook.rst:1733: WARNING: Title underline too short.

Contiguous Rotatable Bonds
=========================
/<<PKGBUILDDIR>>/Docs/Book/Cookbook.rst:7: WARNING: duplicate label introduction, other instance in /<<PKGBUILDDIR>>/Docs/Book/Cartridge.md
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/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:207: WARNING: duplicate label writing molecules, other instance in /<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md
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/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:430: WARNING: duplicate label working with molecules, other instance in /<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md
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/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:664: WARNING: duplicate label working with 3d molecules, other instance in /<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:787: WARNING: duplicate label preserving molecules, other instance in /<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md
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WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst:28: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Avalon.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst:113: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Avalon.rst
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst:21: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2DQt' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolStandardize.rst:6: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolStandardize.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst:14: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.RegistrationHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.rdScaffoldNetwork' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdAbbreviations' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCIPLabeler' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDeprotect' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDetermineBonds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdEHTTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMHFPFingerprint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolEnumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdTautomerQuery' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst:18: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst:18: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst:24: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst:38: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst:19: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst:14: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst:19: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.cQuantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst:23: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Neural.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Neural.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst:24: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.utils.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst:37: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.utils.rst
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Avalon.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Avalon.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst
WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst:28: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Avalon.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst:113: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Avalon.rst
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.AtomPairs.rst
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst:21: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.ChemUtils.rst
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2DQt' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Draw.rst
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.EState.rst
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.FeatMaps.rst
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Features.rst
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fingerprints.rst
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Fraggle.rst
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDb.rst
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolKey.rst
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst:14: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm2D.rst
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.RegistrationHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Pharm3D.rst
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.rdScaffoldNetwork' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Scaffolds.rst
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Subshape.rst
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.Suppliers.rst
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdAbbreviations' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCIPLabeler' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDeprotect' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDetermineBonds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdEHTTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMHFPFingerprint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolEnumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdTautomerQuery' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.fmcs.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst:18: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.Metric.rst
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst:18: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataStructs.rst
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Dbase.rst
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DistanceGeometry.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.DataManip.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst:24: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst:38: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Geometry.rst
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst:19: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst:14: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Cluster.rst
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst:19: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Composite.rst
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.cQuantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst:23: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Data.rst
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.DecTree.rst
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst:15: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Descriptors.rst
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rst
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.KNN.rst
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.MLUtils.rst
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.ModelPackage.rst
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Neural.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Neural.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.NaiveBayes.rst
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.SLT.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Neural.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.SLT.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Neural.rst
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Scoring.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.SLT.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Scoring.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.SLT.rst
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Numerics.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Scoring.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Numerics.rst:12: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.Scoring.rst
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDLogger' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDRandom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.SimDivFilters.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Numerics.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.SimDivFilters.rst:13: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Numerics.rst
WARNING: autodoc: failed to import module 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'TestRunner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.rst:5: WARNING: duplicate label subpackages, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.rst:12: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.SimDivFilters.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.rst:23: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.SimDivFilters.rst
WARNING: autodoc: failed to import module 'VLib.Filter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Node' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.NodeLib.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.NodeLib.rst:19: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.rst
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Output' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Supply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Transform' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdBase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'six' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.utils.rst:5: WARNING: duplicate label submodules, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.NodeLib.rst
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.utils.rst:16: WARNING: duplicate label module contents, other instance in /<<PKGBUILDDIR>>/Docs/Book/source/rdkit.VLib.NodeLib.rst
WARNING: autodoc: failed to import module 'utils.cactvs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.fileutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.listutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.spiral' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /<<PKGBUILDDIR>>/Docs/Book/data/README.md: WARNING: document isn't included in any toctree
done
processing RDKit.tex... index Overview Install GettingStartedInPython RDKit_Book Cookbook Cartridge BackwardsIncompatibleChanges api-docs source/rdkit source/rdkit.Avalon source/rdkit.Avalon.pyAvalonTools source/rdkit.Chem source/rdkit.Chem.AtomPairs source/rdkit.Chem.AtomPairs.Pairs source/rdkit.Chem.AtomPairs.Sheridan source/rdkit.Chem.AtomPairs.Torsions source/rdkit.Chem.AtomPairs.Utils source/rdkit.Chem.ChemUtils source/rdkit.Chem.ChemUtils.AlignDepict source/rdkit.Chem.ChemUtils.BulkTester source/rdkit.Chem.ChemUtils.DescriptorUtilities source/rdkit.Chem.ChemUtils.SDFToCSV source/rdkit.Chem.ChemUtils.TemplateExpand source/rdkit.Chem.Draw source/rdkit.Chem.Draw.IPythonConsole source/rdkit.Chem.Draw.MolDrawing source/rdkit.Chem.Draw.SimilarityMaps source/rdkit.Chem.Draw.rdMolDraw2D source/rdkit.Chem.Draw.rdMolDraw2DQt source/rdkit.Chem.Draw.aggCanvas source/rdkit.Chem.Draw.cairoCanvas source/rdkit.Chem.Draw.canvasbase source/rdkit.Chem.Draw.mplCanvas source/rdkit.Chem.Draw.qtCanvas source/rdkit.Chem.EState source/rdkit.Chem.EState.AtomTypes source/rdkit.Chem.EState.EState source/rdkit.Chem.EState.EState_VSA source/rdkit.Chem.EState.Fingerprinter source/rdkit.Chem.FeatMaps source/rdkit.Chem.FeatMaps.FeatMapParser source/rdkit.Chem.FeatMaps.FeatMapPoint source/rdkit.Chem.FeatMaps.FeatMapUtils source/rdkit.Chem.FeatMaps.FeatMaps source/rdkit.Chem.Features source/rdkit.Chem.Features.FeatDirUtilsRD source/rdkit.Chem.Features.ShowFeats source/rdkit.Chem.Fingerprints source/rdkit.Chem.Fingerprints.ClusterMols source/rdkit.Chem.Fingerprints.DbFpSupplier source/rdkit.Chem.Fingerprints.FingerprintMols source/rdkit.Chem.Fingerprints.MolSimilarity source/rdkit.Chem.Fingerprints.SimilarityScreener source/rdkit.Chem.Fraggle source/rdkit.Chem.Fraggle.FraggleSim source/rdkit.Chem.MolDb source/rdkit.Chem.MolDb.FingerprintUtils source/rdkit.Chem.MolDb.Loader source/rdkit.Chem.MolDb.Loader_orig source/rdkit.Chem.MolDb.Loader_sa source/rdkit.Chem.MolKey source/rdkit.Chem.MolKey.InchiInfo source/rdkit.Chem.MolKey.MolKey source/rdkit.Chem.Pharm2D source/rdkit.Chem.Pharm2D.Generate source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D source/rdkit.Chem.Pharm2D.Matcher source/rdkit.Chem.Pharm2D.SigFactory source/rdkit.Chem.Pharm2D.Utils source/rdkit.Chem.Pharm3D source/rdkit.Chem.Pharm3D.EmbedLib source/rdkit.Chem.Pharm3D.ExcludedVolume source/rdkit.Chem.Pharm3D.Pharmacophore source/rdkit.Chem.Scaffolds source/rdkit.Chem.Scaffolds.MurckoScaffold source/rdkit.Chem.Scaffolds.rdScaffoldNetwork source/rdkit.Chem.SimpleEnum source/rdkit.Chem.SimpleEnum.Enumerator source/rdkit.Chem.Subshape source/rdkit.Chem.Subshape.BuilderUtils source/rdkit.Chem.Subshape.SubshapeAligner source/rdkit.Chem.Subshape.SubshapeBuilder source/rdkit.Chem.Subshape.SubshapeObjects source/rdkit.Chem.Suppliers source/rdkit.Chem.Suppliers.DbMolSupplier source/rdkit.Chem.Suppliers.MolSupplier source/rdkit.Chem.fmcs source/rdkit.Chem.fmcs.fmcs source/rdkit.Chem.AllChem source/rdkit.Chem.BRICS source/rdkit.Chem.BuildFragmentCatalog source/rdkit.Chem.ChemicalFeatures source/rdkit.Chem.ChemicalForceFields source/rdkit.Chem.Crippen source/rdkit.Chem.Descriptors source/rdkit.Chem.Descriptors3D source/rdkit.Chem.EnumerateHeterocycles source/rdkit.Chem.EnumerateStereoisomers source/rdkit.Chem.FastSDMolSupplier source/rdkit.Chem.FeatFinderCLI source/rdkit.Chem.FilterCatalog source/rdkit.Chem.FragmentCatalog source/rdkit.Chem.FragmentMatcher source/rdkit.Chem.Fragments source/rdkit.Chem.FunctionalGroups source/rdkit.Chem.GraphDescriptors source/rdkit.Chem.Graphs source/rdkit.Chem.Lipinski source/rdkit.Chem.MACCSkeys source/rdkit.Chem.MCS source/rdkit.Chem.MolCatalog source/rdkit.Chem.MolStandardize source/rdkit.Chem.MolStandardize.rdMolStandardize source/rdkit.Chem.MolSurf source/rdkit.Chem.PandasTools source/rdkit.Chem.PeriodicTable source/rdkit.Chem.PropertyMol source/rdkit.Chem.PyMol source/rdkit.Chem.QED source/rdkit.Chem.Randomize source/rdkit.Chem.Recap source/rdkit.Chem.ReducedGraphs source/rdkit.Chem.RegistrationHash source/rdkit.Chem.SATIS source/rdkit.Chem.SaltRemover source/rdkit.Chem.ShowMols source/rdkit.Chem.TemplateAlign source/rdkit.Chem.TorsionFingerprints source/rdkit.Chem.inchi source/rdkit.Chem.rdchem source/rdkit.Chem.rdDistGeom source/rdkit.Chem.rdqueries source/rdkit.Chem.rdFMCS source/rdkit.Chem.rdMolAlign source/rdkit.Chem.rdMolHash source/rdkit.Chem.rdReducedGraphs source/rdkit.Chem.rdtrajectory source/rdkit.Chem.rdMolTransforms source/rdkit.Chem.rdmolfiles source/rdkit.Chem.rdPartialCharges source/rdkit.Chem.rdMolCatalog source/rdkit.Chem.rdCoordGen source/rdkit.Chem.rdMolChemicalFeatures source/rdkit.Chem.rdMMPA source/rdkit.Chem.rdRGroupDecomposition source/rdkit.Chem.rdForceFieldHelpers source/rdkit.Chem.rdDepictor source/rdkit.Chem.rdChemicalFeatures source/rdkit.Chem.rdmolops source/rdkit.Chem.rdFreeSASA source/rdkit.Chem.rdMolInterchange source/rdkit.Chem.rdShapeHelpers source/rdkit.Chem.rdinchi source/rdkit.Chem.rdChemReactions source/rdkit.Chem.rdSubstructLibrary source/rdkit.Chem.rdfiltercatalog source/rdkit.Chem.rdfragcatalog source/rdkit.Chem.rdMolDescriptors source/rdkit.Chem.rdFingerprintGenerator source/rdkit.Chem.rdMHFPFingerprint source/rdkit.Chem.rdSLNParse source/rdkit.Chem.rdAbbreviations source/rdkit.Chem.rdDeprotect source/rdkit.Chem.rdMolEnumerator source/rdkit.Chem.rdCIPLabeler source/rdkit.Chem.rdTautomerQuery source/rdkit.Chem.rdEHTTools source/rdkit.Chem.rdDetermineBonds source/rdkit.DataManip source/rdkit.DataManip.Metric source/rdkit.DataManip.Metric.rdMetricMatrixCalc source/rdkit.DataStructs source/rdkit.DataStructs.BitEnsemble source/rdkit.DataStructs.BitEnsembleDb source/rdkit.DataStructs.BitUtils source/rdkit.DataStructs.LazySignature source/rdkit.DataStructs.TopNContainer source/rdkit.DataStructs.VectCollection source/rdkit.DataStructs.cDataStructs source/rdkit.Dbase source/rdkit.Dbase.DbConnection source/rdkit.Dbase.DbInfo source/rdkit.Dbase.DbModule source/rdkit.Dbase.DbReport source/rdkit.Dbase.DbResultSet source/rdkit.Dbase.DbUtils source/rdkit.Dbase.StorageUtils source/rdkit.DistanceGeometry source/rdkit.DistanceGeometry.DistGeom source/rdkit.ForceField source/rdkit.ForceField.rdForceField source/rdkit.Geometry source/rdkit.Geometry.rdGeometry source/rdkit.ML source/rdkit.ML.Cluster source/rdkit.ML.Cluster.Butina source/rdkit.ML.Cluster.ClusterUtils source/rdkit.ML.Cluster.ClusterVis source/rdkit.ML.Cluster.Clusters source/rdkit.ML.Cluster.Murtagh source/rdkit.ML.Cluster.Resemblance source/rdkit.ML.Cluster.Standardize source/rdkit.ML.Cluster.Clustering source/rdkit.ML.Composite source/rdkit.ML.Composite.AdjustComposite source/rdkit.ML.Composite.BayesComposite source/rdkit.ML.Composite.Composite source/rdkit.ML.Data source/rdkit.ML.Data.DataUtils source/rdkit.ML.Data.FindQuantBounds source/rdkit.ML.Data.MLData source/rdkit.ML.Data.Quantize source/rdkit.ML.Data.cQuantize source/rdkit.ML.Data.SplitData 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Chapter 1.
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[]\T1/qtm/m/n/10 Chem-in-for-mat-ics nodes for KN-IME (dis-tributed from the KN
-IME com-mu-nity site:
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Chapter 2.
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[]\T1/qtm/m/n/10 If you want to use the python wrap-pers: \T1/txtt/m/n/10 ./boo
tstrap.sh [][]with[]libraries=python,
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[]\T1/qtm/m/n/10 You can en-able sup-port for gen-er-at-ing InChI strings and I
nChI keys by adding the ar-gu-ment
[11] [12] [13] [14]
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\T1/qtm/m/n/10 This sec-tion as-sumes that python is in-stalled in \T1/txtt/m/n
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[]\T1/txtt/m/n/10 DRDK_BUILD_AVALON_SUPPORT=ON []DRDK_BUILD_PGSQL=ON []DPostgre
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Chapter 3.
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[]\T1/qtm/m/n/10 An-other op-tion for Com-pute2DCoords al-lows you to gen-er-at
e 2D de-pic-tions for molecules that

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[]\T1/qtm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/txtt/m/n/10 rdkit.Chem.rdDepictor.
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[]\T1/txtt/m/n/10 [cH:5]1[cH:6][c:7]2[cH:8][n:9][cH:10][cH:11][c:12]2[c:3]([cH:
4]1)[C:2](=[O:1])[N:13]=[N+:14]=[N- 
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[]\T1/qtm/m/n/10 Acidic| 
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Chapter 4.
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[]\T1/qtm/m/n/10 The clas-sic ex-am-ple of this is cis-platin - \T1/txtt/m/n/10
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\T1/qtm/m/n/10 Here's the rd-kitj-son rep-re-sen-ta-tion of the stereo groups f
rom the molecule
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xpand.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_tran
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[]\T1/qtm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/txtt/m
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m.
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Chapter 5.
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ng>] [134 <./RDKitCB_23_im0.png> <./RDKitCB_23_im1.png>] [135 <./RDKitCB_32_im0
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[]\T1/txtt/m/n/10 CC(C)C(O)C1C(=O)NC(CC)C(=O)N(C)CC(=O)N(C)C(CC(C)C)C(=O)NC(C(C
)C)C(=O)N(C)C(CC(C)C)C(=O)NC(C)C(=O)NC(C)C(=O)N(C)C(CC(C)C)C(=O)N(C)C(CC(C)C)C(
=O)N(C)C(C(C)C)C(=O)N1C[][] 
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Chapter 7.
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Chapter 8.
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Chapter 9.
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Chapter 10.
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Chapter 11.
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(see the transcript file for additional information)</usr/share/texlive/texmf-d
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Chapter 1.
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[]\T1/qtm/m/n/10 Chem-in-for-mat-ics nodes for KN-IME (dis-tributed from the KN
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Chapter 2.
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[]\T1/qtm/m/n/10 If you want to use the python wrap-pers: \T1/txtt/m/n/10 ./boo
tstrap.sh [][]with[]libraries=python,
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[]\T1/qtm/m/n/10 You can en-able sup-port for gen-er-at-ing InChI strings and I
nChI keys by adding the ar-gu-ment
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Chapter 3.
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[]\T1/qtm/m/n/10 An-other op-tion for Com-pute2DCoords al-lows you to gen-er-at
e 2D de-pic-tions for molecules that

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[]\T1/qtm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/txtt/m/n/10 rdkit.Chem.rdDepictor.
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[]\T1/qtm/m/n/10 Acidic| 
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Chapter 4.
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ng> <./potential_stereo_double_bond3.png>] [98] [99] [100 <./nontetstereo_sp1.p
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[]\T1/qtm/m/n/10 The clas-sic ex-am-ple of this is cis-platin - \T1/txtt/m/n/10
 Cl[Pt@SP1](Cl)(<[][NH3])<[][NH3] \T1/qtm/m/n/10 - vs trans-platin -
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\T1/qtm/m/n/10 Here's the rd-kitj-son rep-re-sen-ta-tion of the stereo groups f
rom the molecule
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xpand.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_tran
s_expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_b
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[]\T1/qtm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/txtt/m
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m.
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Chapter 5.
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ng>] [134 <./RDKitCB_23_im0.png> <./RDKitCB_23_im1.png>] [135 <./RDKitCB_32_im0
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Chapter 6.
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Chapter 7.
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\T1/qtm/m/n/10 Un-charger::uncharge() will now neu-tral-ize \T1/txtt/m/n/10 [Cl
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\T1/txtt/m/n/10 [N+](=O)([O[]])[O[]], P(=O)([O[]])[O[]], P(=O)([O[]])([O[]])[O[
]], S([O[]])[O[]], S(=O)([O[]])[O[]],
[211] [212] [213] [214]
Chapter 8.
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Chapter 9.
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\T1/qtm/m/n/10 Groups of molecules are read us-ing a Sup-plier (for ex-am-ple, 
an \T1/txtt/m/n/10 RDKit::SDMolSupplier \T1/qtm/m/n/10 or an
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[]\T1/qtm/m/n/10 The \T1/txtt/m/n/10 auto\TS1/txtt/m/n/10 ' \T1/txtt/m/n/10 key
word here is hiding the fact that \T1/qtm/m/n/10 get-Bond-Be-tweenAtoms\T1/txtt
/m/n/10 returns the index of the
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Chapter 10.
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Chapter 11.
(./RDKit.ind) [261] (./RDKit.aux) )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
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Output written on RDKit.pdf (271 pages, 2652704 bytes).
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[]\T1/qtm/m/n/10 Chem-in-for-mat-ics nodes for KN-IME (dis-tributed from the KN
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Chapter 2.
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[]\T1/qtm/m/n/10 If you want to use the python wrap-pers: \T1/txtt/m/n/10 ./boo
tstrap.sh [][]with[]libraries=python,
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[]\T1/qtm/m/n/10 You can en-able sup-port for gen-er-at-ing InChI strings and I
nChI keys by adding the ar-gu-ment
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Chapter 3.
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[]\T1/qtm/m/n/10 An-other op-tion for Com-pute2DCoords al-lows you to gen-er-at
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[]\T1/qtm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
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[]\T1/qtm/m/n/10 Acidic| 
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Chapter 4.
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ng> <./potential_stereo_double_bond3.png>] [98] [99] [100 <./nontetstereo_sp1.p
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[]\T1/qtm/m/n/10 The clas-sic ex-am-ple of this is cis-platin - \T1/txtt/m/n/10
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\T1/qtm/m/n/10 Here's the rd-kitj-son rep-re-sen-ta-tion of the stereo groups f
rom the molecule
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xpand.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_tran
s_expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_b
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[]\T1/qtm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/txtt/m
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m.
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Chapter 5.
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ng>] [134 <./RDKitCB_23_im0.png> <./RDKitCB_23_im1.png>] [135 <./RDKitCB_32_im0
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ng (PNG copy)>] [138 <./RDKitCB_2_im0.png> <./RDKitCB_2_im1.png>] [139 <./RDKit
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[142 <./RDKitCB_39_im0.png (PNG copy)>] [143 <./RDKitCB_17_im0.png> <./RDKitCB_
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@H]([C@@H]([C@H](C(=O)O1)C)O[C@H]2C[C@@]([C@H]([C@@H](O2)C)O)(C)OC)C)O[C@H]3[C@
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Chapter 6.
[189] [190] [191] [192] [193]
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[194] [195] [196] [197] [198] [199]
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[200] [201] [202] [203] [204] [205] [206] [207] [208]
Chapter 7.
[209] [210]
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\T1/qtm/m/n/10 Un-charger::uncharge() will now neu-tral-ize \T1/txtt/m/n/10 [Cl
,Br,I][O[]], [Cl,Br,I](=O)[O[]], [Cl,

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\T1/txtt/m/n/10 Br,I](=O)(=O)[O[]], [Cl,Br,I](=O)(=O)(=O)[O[]], [O[]]N=N[O[]], 
[N,P](=O)[O[]],

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\T1/txtt/m/n/10 [N+](=O)([O[]])[O[]], P(=O)([O[]])[O[]], P(=O)([O[]])([O[]])[O[
]], S([O[]])[O[]], S(=O)([O[]])[O[]],
[211] [212] [213] [214]
Chapter 8.
[215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226]
[227] [228] [229] [230] [231] [232]
Chapter 9.
[233] [234] [235]
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\T1/qtm/m/n/10 Groups of molecules are read us-ing a Sup-plier (for ex-am-ple, 
an \T1/txtt/m/n/10 RDKit::SDMolSupplier \T1/qtm/m/n/10 or an
[236] [237] [238] [239] [240] [241] [242]
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[]\T1/qtm/m/n/10 The \T1/txtt/m/n/10 auto\TS1/txtt/m/n/10 ' \T1/txtt/m/n/10 key
word here is hiding the fact that \T1/qtm/m/n/10 get-Bond-Be-tweenAtoms\T1/txtt
/m/n/10 returns the index of the
[243] [244] [245] [246]
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[251] [252] [253] [254] [255] [256] [257] [258]
Chapter 10.
[259] [260]
Chapter 11.
(./RDKit.ind) [261] (./RDKit.aux) )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texmf/fonts/type1/public/tex-
gyre/qhvb.pfb></usr/share/texmf/fonts/type1/public/tex-gyre/qhvbi.pfb></usr/sha
re/texmf/fonts/type1/public/tex-gyre/qhvr.pfb></usr/share/texmf/fonts/type1/pub
lic/tex-gyre/qtmb.pfb></usr/share/texmf/fonts/type1/public/tex-gyre/qtmr.pfb></
usr/share/texmf/fonts/type1/public/tex-gyre/qtmri.pfb></usr/share/texlive/texmf
-dist/fonts/type1/public/txfonts/t1xbtt.pfb></usr/share/texlive/texmf-dist/font
s/type1/public/txfonts/t1xtt.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/txfonts/t1xtt.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/txfonts
/tcxtt.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb>
Output written on RDKit.pdf (271 pages, 2652704 bytes).
Transcript written on RDKit.log.
Latexmk: Getting log file 'RDKit.log'
Latexmk: Examining 'RDKit.fls'
Latexmk: Examining 'RDKit.log'
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Log file says output to 'RDKit.pdf'
Latexmk: All targets () are up-to-date

make[3]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book/_build/latex'
pdflatex finished; the PDF files are in _build/latex.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp -r rdkit obj-*/
find /<<PKGBUILDDIR>> -name rdchem.so
/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/rdchem.so
#export RDBASE=/<<PKGBUILDDIR>> PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:"
PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//rdkit/Chem/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:" dh_auto_test
	cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=--verbose ARGS\+=-j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process --verbose -j4
UpdateCTestConfiguration  from :/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Parse Config file:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
 Add coverage exclude regular expressions.
UpdateCTestConfiguration  from :/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Parse Config file:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/DartConfiguration.tcl
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
        Start   1: testCoordGen

1: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/testCoordGen
1: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen
1: Test timeout computed to be: 1500
test 2
        Start   2: pyCoordGen

2: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/External/CoordGen/Wrap/testCoordGen.py"
2: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap
2: Test timeout computed to be: 1500
test 3
        Start   3: testDict

3: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/testDict
3: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral
3: Test timeout computed to be: 1500
test 4
        Start   4: testRDValue

4: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/testRDValue
4: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral
4: Test timeout computed to be: 1500
3: [10:12:02] Testing Github940: property dictionaries leaking memory
3: [10:12:02] 	done
3: Testing RDValue
3: Testing RDAny
3: dict set int vect
3: dict get int vect
4: -- running tests -- 
4: min: -2147483648 -2147483648
4: min: 0 0
4: min: 2.22507e-308 2.22507e-308
4: min: 1.17549e-38 1.17549e-38
4: min: 0 0
4: == int
4: == double
4: == float
4: == unsigned int
4: == bool
4: == std::string
  1/213 Test   #4: testRDValue ............................   Passed    0.19 sec
test 5
        Start   5: testConcurrentQueue

5: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/testConcurrentQueue
5: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral
5: Test timeout computed to be: 1500
5: [10:12:02] 
5: -----------------------------------------
5: [10:12:02] Finished: testPushAndPop() 
5: [10:12:02] 
5: -----------------------------------------
5: [10:12:02] 
5: -----------------------------------------
1: core
1:      RDKit          2D
1: 
1:   4  4  0  0  0  0  0  0  0  0999 V2000
1:     0.6824    0.1850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.1850   -0.6824    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.6824   -0.1850    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.1850    0.6824    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  1  1  0
1: M  END
1: 
1: core+sidechain
1:      RDKit          2D
1: 
1:   7  7  0  0  0  0  0  0  0  0999 V2000
1:     0.6496    0.9080    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.3926   -0.0584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.4726   -0.5600    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.3396   -0.0616    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.2048   -0.5634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.3590   -0.3156    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.6160    0.6508    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   2  6  1  0
1:   6  7  1  0
1:   7  1  1  0
1: M  END
1: 
1: templated
1:      RDKit          2D
1: 
1:   7  7  0  0  0  0  0  0  0  0999 V2000
1:     0.6824    0.1850    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   2  6  1  0
1:   6  7  1  0
1:   7  1  1  0
1: M  END
1: 
1: core
1:      RDKit          2D
1: 
1:  10 10  0  0  0  0  0  0  0  0999 V2000
1:    -1.2956   -1.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   9 10  1  0
1:  10  1  1  0
1: M  END
1: 
1: core+sidechain
1:      RDKit          2D
1: 
1:  12 12  0  0  0  0  0  0  0  0999 V2000
1:     0.2846   -0.7516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.2790   -1.7516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:    -0.5732    0.7532    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
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1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   9 10  1  0
1:   8 11  1  0
1:  11 12  1  0
1:  12  1  1  0
1: M  END
1: 
1: templated
1:      RDKit          2D
1: 
1:  12 12  0  0  0  0  0  0  0  0999 V2000
1:    -1.2984   -0.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.4338    0.2488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   9 10  1  0
1:   8 11  1  0
1:  11 12  1  0
1:  12  1  1  0
1: M  END
1: 
1: core
1:      RDKit          2D
1: 
1:  10 10  0  0  0  0  0  0  0  0999 V2000
1:    -1.2956   -1.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.2984   -0.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:     1.2956    1.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.2984    0.2536    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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1:     0.4366   -1.2488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   9 10  1  0
1:  10  1  1  0
1: M  END
1: 
1: core+sidechain
1:      RDKit          2D
1: 
1:  16 16  0  0  0  0  0  0  0  0999 V2000
1:     1.7868    0.7799    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.6532    1.2791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
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1:  12 13  1  0
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1:   8 15  1  0
1:  15 16  1  0
1:  16  1  1  0
1: M  END
1: 
1: templated
1:      RDKit          2D
1: 
1:  16 16  0  0  0  0  0  0  0  0999 V2000
1:    -1.2984   -0.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   9 10  1  0
1:  10 11  1  0
1:  11 12  1  0
1:  12 13  1  0
1:  13 14  1  0
1:   8 15  1  0
1:  15 16  1  0
1:  16  1  1  0
1: M  END
1: 
1: core
1:      RDKit          2D
1: 
1:   9 10  0  0  0  0  0  0  0  0999 V2000
1:     0.6718   -0.9994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.5374   -0.4988    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   6  1  1  0
1:   9  5  1  0
1: M  END
1: 
1: core+sidechain
1:      RDKit          2D
1: 
1:  19 21  0  0  0  0  0  0  0  0999 V2000
1:    -0.5657   -0.9286    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   2  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
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1:   7 12  1  0
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1:  13  1  1  0
1:  19 12  1  0
1:  11  9  1  0
1: M  END
1: 
1: templated
1:      RDKit          2D
1: 
1:  19 21  0  0  0  0  0  0  0  0999 V2000
1:     0.5360   -0.9365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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1:   4  5  1  0
1:   2  6  1  0
1:   6  7  1  0
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1:  13  1  1  0
1:  19 12  1  0
1:  11  9  1  0
1: M  END
1: 
1: core
1:      RDKit          2D
1: 
1:   5  4  0  0  0  0  0  0  0  0999 V2000
1:     1.2134   -0.4976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.3464    0.0006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.3444    1.0006    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.5186   -0.5010    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.3856   -0.0028    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   2  4  1  0
1:   4  5  1  0
1: M  END
1: 
1: core+sidechain
1:      RDKit          2D
1: 
1:   7  6  0  0  0  0  0  0  0  0999 V2000
1:    -1.7333   -0.5679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.8661   -0.0697    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.8641    0.9303    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.0011   -0.5713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.8659   -0.0731    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.8679    0.9269    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.7309   -0.5749    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   2  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   5  7  1  0
1: M  END
1: 
1: templated
1:      RDKit          2D
1: 
1:   7  6  0  0  0  0  0  0  0  0999 V2000
1:     1.2227   -0.4921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.3464    0.0006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.3350    1.0058    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.5185   -0.5117    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.3902   -0.0216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.2506   -0.5314    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.4014    0.9784    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   2  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   5  7  1  0
1: M  END
1: 
1: test1
1:      RDKit          2D
1: 
1:  12 12  0  0  0  0  0  0  0  0999 V2000
1:    -0.2902    0.4155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.5740    0.9187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.4418    0.4219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.3060    0.9249    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.3024    1.9249    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.4454   -0.5781    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.5812   -1.0813    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.2866   -0.5843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.1508   -1.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.0186   -0.5905    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.0222    0.4095    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.8828   -1.0937    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  2  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   3  6  2  0
1:   6  7  1  0
1:   7  8  2  0
1:   8  9  1  0
1:   9 10  1  0
1:  10 11  2  0
1:  10 12  1  0
1:   8  1  1  0
1: M  END
1: 
1: test2
1:      RDKit          2D
1: 
1:   5  4  0  0  0  0  0  0  0  0999 V2000
1:    -0.4980    0.7210    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.0004   -0.1464    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.8678   -0.6440    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.5020    0.7182    0.0000 F   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.8642   -0.6488    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   2  4  1  0
1:   2  5  1  0
1: M  END
1: 
1: cyclosporine a
1:      RDKit          2D
1: 
1:  85 85  0  0  0  0  0  0  0  0999 V2000
1:     1.4840   -0.8529    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.6174   -1.3521    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.6176   -2.3509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.4860   -2.8479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.4912   -3.8491    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.3504   -2.3385    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.3352   -1.3311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.1902   -0.7993    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.1580    0.1961    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.0642   -1.2607    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.9260   -0.7295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.9144    0.3303    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     5.7766    0.8337    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.0008    0.8409    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.8596    1.9125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.8162    2.2071    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.2038    1.4219    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.2560    3.1855    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.5280    4.2325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.7128    4.8927    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.8530    5.8895    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.7676    4.5077    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.0820    5.0835    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.9744    4.6151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.8344    5.1337    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.9792    3.6203    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.8192    3.0813    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.7974    3.5817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.7998    4.5809    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.7790    3.0789    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.8812    2.0705    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.1202    1.6015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.4194    2.0931    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.0590    0.6211    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.8626    0.0983    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.8096   -0.8961    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -4.6470   -1.4375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.9122   -1.3587    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.8776   -2.3565    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.9982   -2.8425    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.1382   -2.3311    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.9886   -3.8459    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.1202   -4.3461    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.2526   -3.8491    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.6116   -4.3521    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.2494   -2.8505    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.1228   -5.3475    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.2584   -5.8507    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.6092   -5.3541    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.2624   -6.8511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.6018   -7.3547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.5982   -8.3547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.4624   -8.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.9906   -5.8449    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.8520   -4.3501    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.7288   -2.8719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.7098   -3.8701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -4.6032   -2.3871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.0646   -0.8235    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -4.7362    0.5679    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -5.5794    0.0605    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -5.5618   -0.9361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -6.4498    0.5487    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.1628    0.1727    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -4.7698    1.6253    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -5.5952    2.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -6.4896    1.7311    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -5.5292    3.1711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -4.6054    3.6407    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.7186    2.0867    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.0328    6.0847    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.4396    4.6417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.4580    5.6909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.3220    6.1985    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.5836    6.2065    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.2682    3.0557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.6630    2.5215    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     5.5876    2.1073    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.5648    3.5065    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     5.7968   -1.2481    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     6.6786   -0.7913    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     7.5218   -1.3355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     6.7252    0.2017    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.0970   -2.2659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.2220   -2.8307    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   3  2  1  1
1:   3  4  1  0
1:   4  5  2  0
1:   4  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  2  0
1:   8 10  1  0
1:  10 11  1  0
1:  11 12  1  0
1:  12 13  2  0
1:  12 14  1  0
1:  14 15  1  0
1:  15 16  1  0
1:  16 17  2  0
1:  16 18  1  0
1:  18 19  1  0
1:  19 20  1  0
1:  20 21  2  0
1:  20 22  1  0
1:  22 23  1  0
1:  23 24  1  0
1:  24 25  2  0
1:  24 26  1  0
1:  26 27  1  0
1:  27 28  1  0
1:  28 29  2  0
1:  28 30  1  0
1:  30 31  1  0
1:  31 32  1  0
1:  32 33  2  0
1:  32 34  1  0
1:  34 35  1  0
1:  35 36  1  0
1:  36 37  2  0
1:  36 38  1  0
1:  38 39  1  0
1:  39 40  1  0
1:  40 41  2  0
1:  40 42  1  0
1:  43 42  1  6
1:  43 44  1  0
1:  44 45  2  0
1:  44 46  1  0
1:  43 47  1  0
1:  47 48  1  0
1:  48 49  1  6
1:  48 50  1  0
1:  50 51  1  0
1:  51 52  2  0
1:  52 53  1  0
1:  47 54  1  1
1:  42 55  1  0
1:  39 56  1  6
1:  56 57  1  0
1:  56 58  1  0
1:  38 59  1  0
1:  35 60  1  6
1:  60 61  1  0
1:  61 62  1  0
1:  61 63  1  0
1:  34 64  1  0
1:  31 65  1  6
1:  65 66  1  0
1:  66 67  1  0
1:  66 68  1  0
1:  30 69  1  0
1:  27 70  1  6
1:  23 71  1  6
1:  19 72  1  6
1:  72 73  1  0
1:  73 74  1  0
1:  73 75  1  0
1:  18 76  1  0
1:  15 77  1  6
1:  77 78  1  0
1:  77 79  1  0
1:  11 80  1  6
1:  80 81  1  0
1:  81 82  1  0
1:  81 83  1  0
1:  10 84  1  0
1:   6 85  1  0
1:  46  3  1  0
1: M  END
1: 
1: single-double
1:      RDKit          2D
1: 
1:  17 16  0  0  0  0  0  0  0  0999 V2000
1:    -6.9282   -0.2298    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -6.0618    0.2696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -5.1962   -0.2312    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -4.3298    0.2682    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -3.4642   -0.2326    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.5978    0.2668    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.7322   -0.2340    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.8658    0.2654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.0002   -0.2352    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.8662    0.2640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.7318   -0.2366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.5982    0.2626    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.4638   -0.2380    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     4.3302    0.2612    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     5.1958   -0.2394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     6.0622    0.2598    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:     6.9278   -0.2408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  2  3
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   9 10  1  0
1:  10 11  2  3
1:  11 12  1  0
1:  12 13  2  3
1:  13 14  1  0
1:  14 15  2  3
1:  15 16  1  0
1:  16 17  1  0
1: M  END
1: 
1: cis-trans
1:      RDKit          2D
1: 
1:  10  9  0  0  0  0  0  0  0  0999 V2000
1:    -3.6370   -0.2028    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
1:    -2.7706   -0.7022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.9050   -0.2016    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.0386   -0.7008    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.1730   -0.2002    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.6934   -0.6994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.5590   -0.1988    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.5582    0.8012    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     2.4238    1.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     3.2902    0.8026    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  2  0
1:   3  4  1  0
1:   4  5  2  0
1:   5  6  1  0
1:   6  7  2  0
1:   7  8  1  0
1:   8  9  2  0
1:   9 10  1  0
1: M  END
1: 
1: admntn
1:      RDKit          2D
1: 
1:  10 12  0  0  0  0  0  0  0  0999 V2000
1:     1.3505   -0.5360    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.5267   -1.1020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.4629   -1.0366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.7523    0.0052    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -1.4741    0.5660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.4761    0.5032    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.3505    1.0730    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     1.0611    0.5080    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:     0.0643    0.5686    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:    -0.1877   -0.5490    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   3  4  1  0
1:   4  5  1  0
1:   5  6  1  0
1:   6  7  1  0
1:   7  8  1  0
1:   8  9  1  0
1:   6 10  1  0
1:   8  1  1  0
1:   9  4  1  0
1:  10  2  1  0
1: M  END
1: 
1: github 4845 - nan coordinates but no crash
1:      RDKit          2D
1: 
1:  42 44  0  0  0  0  0  0  0  0999 V2000
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan O   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan O   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan C   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:        nan       nan       nan H   0  0  0  0  0  0  0  0  0  0  0  0
1:   1  2  1  0
1:   2  3  1  0
1:   2  4  2  0
1:   4  5  1  0
1:   5  6  3  0
1:   6  7  1  0
1:   7  8  2  0
1:   8  9  1  0
1:   9 10  3  0
1:  10 11  1  0
1:  11 12  2  0
1:  12 13  1  0
1:  13 14  3  0
1:  14 15  1  0
1:  15 16  2  0
1:  16 17  1  0
1:  16 18  1  0
1:  12 19  1  0
1:  19 20  2  0
1:  20 21  1  0
1:  20 22  1  0
1:  19 23  1  0
1:  23 24  3  0
1:  24 25  1  0
1:  25 26  1  0
1:  26 27  2  0
1:  27 28  2  0
1:  26 29  1  0
1:  29 30  3  0
1:   8 31  1  0
1:  31 32  2  0
1:  32 33  1  0
1:  32 34  1  0
1:  31 35  1  0
1:  35 36  3  0
1:  36 37  1  0
1:  37 38  2  0
1:  37 39  1  0
1:  39 40  2  0
1:  40 41  1  0
1:  40 42  1  0
1:  39  4  1  0
1:  15  7  1  0
1:  30 11  1  0
1: M  END
1: 
  2/213 Test   #1: testCoordGen ...........................   Passed    3.47 sec
test 6
        Start   6: dictTestsCatch

6: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/dictTestsCatch
6: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral
6: Test timeout computed to be: 1500
6: ===============================================================================
6: All tests passed (32 assertions in 2 test cases)
6: 
  3/213 Test   #6: dictTestsCatch .........................   Passed    0.14 sec
test 7
        Start   7: logTestsCatch

7: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/logTestsCatch
7: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral
7: Test timeout computed to be: 1500
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: [10:12:05] should not be silent
7: ===============================================================================
7: All tests passed (26 assertions in 3 test cases)
7: 
  4/213 Test   #7: logTestsCatch ..........................   Passed    0.10 sec
test 8
        Start   8: testDataStructs

8: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/testDataStructs
8: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs
8: Test timeout computed to be: 1500
8: 10, 11, 14, 
8: t1: 10, 11, 14, 
8: t2: 10, 11, 15, 17, 
8: t1|t2: 10, 11, 14, 15, 17, 
8: t1&t2: 10, 11, 
8: t1^t2: 14, 15, 17, 
8: ~t1: 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 15, 16, 17, 18, 19, 
8:  except 
3: static boost any:2.99011 s
8: 10, 11, 14, 
8: t1: 10, 11, 14, 
8: t2: 10, 11, 15, 17, 
8: t1|t2: 10, 11, 14, 15, 17, 
8: t1&t2: 10, 11, 
8: t1^t2: 14, 15, 17, 
8: ~t1: 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 12, 13, 15, 16, 17, 18, 19, 
8:  except 
  5/213 Test   #8: testDataStructs ........................   Passed    0.27 sec
test 9
        Start   9: testFPB

9: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/testFPB
9: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs
9: Test timeout computed to be: 1500
  6/213 Test   #9: testFPB ................................   Passed    0.14 sec
test 10
        Start  10: testMultiFPB

10: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/testMultiFPB
10: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs
10: Test timeout computed to be: 1500
  7/213 Test  #10: testMultiFPB ...........................   Passed    0.19 sec
test 11
        Start  11: pyBV

11: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/DataStructs/Wrap/testBV.py"
11: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap
11: Test timeout computed to be: 1500
2: ....
2: ----------------------------------------------------------------------
2: Ran 4 tests in 0.244s
2: 
2: OK
  8/213 Test   #2: pyCoordGen .............................   Passed    5.16 sec
test 12
        Start  12: pyDiscreteValueVect

12: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/DataStructs/Wrap/testDiscreteValueVect.py"
12: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap
12: Test timeout computed to be: 1500
12: ......
12: ----------------------------------------------------------------------
12: Ran 6 tests in 0.018s
12: 
12: OK
  9/213 Test  #12: pyDiscreteValueVect ....................   Passed    1.83 sec
test 13
        Start  13: pySparseIntVect

13: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/DataStructs/Wrap/testSparseIntVect.py"
13: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap
13: Test timeout computed to be: 1500
13: .........
13: ----------------------------------------------------------------------
13: Ran 9 tests in 0.054s
13: 
13: OK
 10/213 Test  #13: pySparseIntVect ........................   Passed    1.72 sec
test 14
        Start  14: pyFPB

14: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/DataStructs/Wrap/testFPB.py"
14: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap
14: Test timeout computed to be: 1500
3: dynamic boost any:5.51884 s
3: static RDAny:0.21815 s
14: .........
14: ----------------------------------------------------------------------
14: Ran 9 tests in 0.039s
14: 
14: OK
 11/213 Test  #14: pyFPB ..................................   Passed    1.67 sec
test 15
        Start  15: testTransforms

15: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/testTransforms
15: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry
15: Test timeout computed to be: 1500
15: ****************************************
15: testPointND
15: ****************************************
15: testPointOps3D
15: ****************************************
15: testPointOps2D
15: ****************************************
15: test12D
15: ref1: 2.17715 3.42676  ref2: 0.702465 0.730051 
15: pt1: 2.25256 3.57288  pt2: 3.95394 3.7319 
15: ****************************************
15: test23D
15: ****************************************
15: test3MatMultiply
15: Pt1: 1 0 0  Pt2: 2 0 0 
15: -Pt1: -1 -0 -0 
15: tp1: 0 0 0  tp2: 0 0 0 
15: tp1: 0 0 0  tp2: 0 0 0 
15: tp1: 0 0 3  tp2: 0 0 3 
15: npt1: 0 0 3  npt2: 0 0 4 
15: Pt1: 0 0 3  Pt2: 6.12323e-17 0 4 
15: ****************************************
15: testFromQuaternion
15: ****************************************
 12/213 Test  #15: testTransforms .........................   Passed    0.40 sec
test 16
        Start  16: testGrid

16: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/testGrid
16: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry
16: Test timeout computed to be: 1500
16: ***********************************************************
16: Testing Grid
16: 	---------------------------------
16: 	 testUniformGrid1 
16: 
16: 	---------------------------------
16: 	 testUniformGrid2 
16: 
16: 	---------------------------------
16: 	 testUniformGridPickling 
16: 
16: 	---------------------------------
16: 	 testGridOps 
16: 
16: 	---------------------------------
16: 	 testUniformGridIndexing 
16: 
 13/213 Test  #16: testGrid ...............................   Passed    0.48 sec
test 17
        Start  17: geometryTestsCatch

17: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/geometryTestsCatch
17: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry
17: Test timeout computed to be: 1500
17: ===============================================================================
17: All tests passed (50 assertions in 5 test cases)
17: 
 14/213 Test  #17: geometryTestsCatch .....................   Passed    0.13 sec
test 18
        Start  18: testPyGeometry

18: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/Geometry/Wrap/testGeometry.py"
18: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap
18: Test timeout computed to be: 1500
3: dynamic RDAny:3.35183 s
3: static RDValue:7e-06 s
3: dynamic RDValue:0.204742 s
3: deleted!
3: [10:12:15] -------------------------------------
3: [10:12:15] Testing String Pickle Roundtrips.
3: [10:12:15] 	done
3: [10:12:15] -------------------------------------
3: [10:12:15] Testing conversion of vect to string.
3: [10:12:15] 	done
3: [10:12:15] -------------------------------------
3: [10:12:15] Testing returning const references.
3: [10:12:15] any cast
3: [10:12:15] done: 0.004501 300000
3: [10:12:15] copy
3: [10:12:15] done: 0.004667 300000
3: [10:12:15] ref
3: [10:12:15] done: 0.004626 300000
3: [10:12:15] dict
3: [10:12:15] done: 0.032082 300000
3: [10:12:15] ref with hasVal
3: [10:12:15] done: 0.011436 300000
3: [10:12:15] 	done
3: [10:12:15] -------------------------------------
3: [10:12:15] Testing dict update.
3: [10:12:15] 	done
3: deleted!
3: deleted!
3: deleted!
3: deleted!
3: deleted!
3: deleted!
 15/213 Test   #3: testDict ...............................   Passed   13.31 sec
test 19
        Start  19: testMatrices

19: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/testMatrices
19: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics
19: Test timeout computed to be: 1500
18: ...........
18: ----------------------------------------------------------------------
18: Ran 11 tests in 0.442s
18: 
18: OK
18: Testing Geometry wrapper
19: [10:12:15] -----------------------------------------
19: [10:12:15] Testing RDNumerics: vectors and matrices Code
19: [10:12:15] ---------------------------------------
19: [10:12:15] 	 test1Vector
19: [10:12:15] ---------------------------------------
19: [10:12:15] 	 test2Matrix
19: [10:12:15] ---------------------------------------
19: [10:12:15] 	 test3SquareMatrix
19: [10:12:15] ---------------------------------------
19: [10:12:15] 	 test4SymmMatrix
 16/213 Test  #19: testMatrices ...........................   Passed    0.06 sec
test 20
        Start  20: testConrec

20: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/testConrec
20: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics
20: Test timeout computed to be: 1500
 17/213 Test  #18: testPyGeometry .........................   Passed    2.35 sec
test 21
        Start  21: testAlignment

21: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/testAlignment
21: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment
21: Test timeout computed to be: 1500
20: ===============================================================================
20: test cases: 1 | 1 passed
20: assertions: - none -
20: 
 18/213 Test  #20: testConrec .............................   Passed    0.44 sec
test 22
        Start  22: pyAlignment

22: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/testAlignment.py"
22: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap
22: Test timeout computed to be: 1500
21: -----------------------------------------
21: Testing Alignment Code
21: ---------------------------------------
21: 	 testBasic
21: ---------------------------------------
21: 	 testTriangle
21: ---------------------------------------
21: 	 testFourPts
21: ---------------------------------------
21: 	 testReflection
21: ---------------------------------------
 19/213 Test  #21: testAlignment ..........................   Passed    0.11 sec
test 23
        Start  23: testOptimizer

23: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/testOptimizer
23: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer
23: Test timeout computed to be: 1500
23: -------------------------------------
23: Testing linear search.
23:   done
23: -------------------------------------
23: Testing BFGS optimization.
23:   done
 20/213 Test  #23: testOptimizer ..........................   Passed    0.03 sec
test 24
        Start  24: testUFFForceField

24: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/testUFFForceField
24: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF
24: Test timeout computed to be: 1500
24: -------------------------------------
24: Unit tests for force field basics.
24:   done
24: -------------------------------------
24: Unit tests for basics of UFF bond-stretch terms.
24:   done
24: -------------------------------------
24: Unit tests for UFF bond-stretch terms.
24:   done
24: -------------------------------------
24: Unit tests for basics of UFF angle terms.
24:   done
24: -------------------------------------
24: Unit tests for UFF angle-bend terms.
24: theta = 3.14159; theta0 = 3.14159
24: theta = 2.094395, param1.theta0 = 2.094395
24:   done
24: -------------------------------------
24:  Test Simple UFF molecule optimizations.
24:   done
24: -------------------------------------
24: Unit tests for UFF nonbonded terms.
24:   done
24: -------------------------------------
24:  Test UFF torsional terms.
24:   done
24: -------------------------------------
24:  Test UFF Parameter objects
24: -------------------------------------
24:  Test Simple UFF molecule optimization, part 2.
24:   done
24: -------------------------------------
24:  Test UFF Torsion Conflicts.
24: C 0.4783 -0.7477 -0.0753 
24: C -0.5465 -0.0176 0.3519 
24: C -0.5114 1.4472 0.0870 
24: H -1.5201 -0.4838 0.2485 
24: H 0.4696 1.8363 0.3367 
24: O -1.2618 1.9423 0.6934 
24: F -0.7163 1.6298 -0.9622 
24:   done
24: -------------------------------------
24: Unit tests for UFF distance constraint terms.
24:   done
24: -------------------------------------
24: Unit tests for all UFF constraint terms.
24:   done
24: -------------------------------------
24: Unit tests for copying UFF ForceFields.
24:   done
24: -------------------------------------
24: Unit test for UFF butane scan.
22: .....
22: ----------------------------------------------------------------------
22: Ran 5 tests in 0.013s
22: 
22: OK
22: Testing Alignment Wrapper code:
 21/213 Test  #22: pyAlignment ............................   Passed    1.62 sec
test 25
        Start  25: testMMFFForceField

25: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/testMMFFForceField
25: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF
25: Test timeout computed to be: 1500
25: -------------------------------------
25: Official MMFF validation suite.
25: 
25: Computing MMFF94 energies for /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_dative.sdf...
24:   done
 22/213 Test  #24: testUFFForceField ......................   Passed    2.93 sec
test 26
        Start  26: pyForceFieldConstraints

26: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/ForceField/Wrap/testConstraints.py"
26: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap
26: Test timeout computed to be: 1500
26: ...[10:12:21] Warning: molecule is tagged as 3D, but all Z coords are zero
26: [10:12:21] Molecule does not have explicit Hs. Consider calling AddHs()
26: [10:12:21] 
26: 
26: ****
26: Invariant Violation
26: bad direction in linearSearch
26: Violation occurred on line 240 in file ./Code/Numerics/Optimizer/BFGSOpt.h
26: Failed Expression: status >= 0
26: ****
26: 
26: ......[10:12:22] Warning: molecule is tagged as 3D, but all Z coords are zero
26: [10:12:22] Molecule does not have explicit Hs. Consider calling AddHs()
26: [10:12:22] 
26: 
26: ****
26: Invariant Violation
26: bad direction in linearSearch
26: Violation occurred on line 240 in file ./Code/Numerics/Optimizer/BFGSOpt.h
26: Failed Expression: status >= 0
26: ****
26: 
26: ...
26: ----------------------------------------------------------------------
26: Ran 12 tests in 1.831s
26: 
26: OK
 23/213 Test  #26: pyForceFieldConstraints ................   Passed    4.25 sec
test 27
        Start  27: testDistGeom

27: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/testDistGeom
27: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom
27: Test timeout computed to be: 1500
27: ***********************************************************
27:    test1 
27: ***********************************************************
27:    testIssue216 
27: Rows: 4 Columns: 4
27:       0      1      1      1
27:       1      0      1      1
27:       1      1      0      1
27:       1      1      1      0
27: ***********************************************************
27: 
 24/213 Test  #27: testDistGeom ...........................   Passed    0.13 sec
test 28
        Start  28: pyDistGeom

28: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/DistGeom/Wrap/rough_test.py"
28: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap
28: Test timeout computed to be: 1500
28: ......
28: ----------------------------------------------------------------------
28: Ran 6 tests in 0.008s
28: 
28: OK
 25/213 Test  #28: pyDistGeom .............................   Passed    1.64 sec
test 29
        Start  29: graphmolTest1

29: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolTest1
29: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
29: Test timeout computed to be: 1500
29: Atoms:
29: 	0 8 O chg: 0  deg: 2 exp: 2 imp: 0 hyb: 0 arom?: 0 chi: 0
29: 	1 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 0 arom?: 0 chi: 0
29: 	2 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 0 arom?: 0 chi: 0
29: 	3 6 C chg: 0  deg: 1 exp: 1 imp: 3 hyb: 0 arom?: 0 chi: 0
29: 	4 6 C chg: 0  deg: 1 exp: 1 imp: 3 hyb: 0 arom?: 0 chi: 0
29: 	5 6 C chg: 0  deg: 1 exp: 3 imp: 1 hyb: 0 arom?: 0 chi: 0
29: 	6 6 C chg: 0  deg: 2 exp: 4 imp: 0 hyb: 0 arom?: 0 chi: 0
29: 	7 7 N chg: 0  deg: 2 exp: 1 imp: 2 hyb: 0 arom?: 1 chi: 0
29: 	8 22 Ti chg: 0  deg: 1 exp: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: getExplicitValence() called without call to calcExplicitValence()
29: Violation occurred on line 306 in file ./Code/GraphMol/Atom.cpp
29: Failed Expression: d_explicitValence > -1
29: ****
29: 
29: N/A imp: -1 hyb: 0 arom?: 0 chi: 0
29: Bonds:
29: 	0 0->1 order: 1 conj?: 0 aromatic?: 0
29: 	1 1->2 order: 2 conj?: 0 aromatic?: 0
29: 	2 2->3 order: 1 conj?: 0 aromatic?: 0
29: 	3 0->4 order: 1 conj?: 0 aromatic?: 0
29: 	4 5->6 order: 3 conj?: 0 aromatic?: 0
29: 	5 6->7 order: 1 conj?: 0 aromatic?: 0
29: 	6 7->8 order: 2 conj?: 0 aromatic?: 0
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: bond already exists
29: Violation occurred on line 380 in file ./Code/GraphMol/RWMol.cpp
29: Failed Expression: !(boost::edge(atomIdx1, atomIdx2, d_graph).second)
29: ****
29: 
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: bond already exists
29: Violation occurred on line 380 in file ./Code/GraphMol/RWMol.cpp
29: Failed Expression: !(boost::edge(atomIdx1, atomIdx2, d_graph).second)
29: ****
29: 
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: attempt to add self-bond
29: Violation occurred on line 379 in file ./Code/GraphMol/RWMol.cpp
29: Failed Expression: atomIdx1 != atomIdx2
29: ****
29: 
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: bond already exists
29: Violation occurred on line 440 in file ./Code/GraphMol/ROMol.cpp
29: Failed Expression: !(boost::edge(bond_pin->getBeginAtomIdx(), bond_pin->getEndAtomIdx(), d_graph) .second)
29: ****
29: 
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: attempt to add self-bond
29: Violation occurred on line 438 in file ./Code/GraphMol/ROMol.cpp
29: Failed Expression: bond_pin->getBeginAtomIdx() != bond_pin->getEndAtomIdx()
29: ****
29: 
29: [10:12:25] Explicit valence for atom # 0 B, 4, is greater than permitted
29: [10:12:25] Explicit valence for atom # 0 B, 5, is greater than permitted
29: [10:12:25] 
29: 
29: ****
29: Post-condition Violation
29: Element 'Xx' not found
29: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
29: Failed Expression: anum > -1
29: ****
29: 
29: [10:12:25] -------------------------------------
29: [10:12:25]     Test github381: thread-safe initialization of the periodic table
29: [10:12:25]   done
29: [10:12:25] -------------------------------------
29: [10:12:25]     Test github1041: Segfault for atom with no owner (expect some warnings)
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: no owner
29: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
29: Failed Expression: dp_mol
29: ****
29: 
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: no owner
29: Violation occurred on line 185 in file ./Code/GraphMol/Bond.h
29: Failed Expression: dp_mol
29: ****
29: 
29: [10:12:25]   done
29: [10:12:25] -------------------------------------
29: [10:12:25]     Test github1041: Segfault for atom with no owner (expect some warnings)
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: no owner
29: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
29: Failed Expression: dp_mol
29: ****
29: 
29: [10:12:25] 
29: 
29: ****
29: Pre-condition Violation
29: no owner
29: Violation occurred on line 185 in file ./Code/GraphMol/Bond.h
29: Failed Expression: dp_mol
29: ****
29: 
29: [10:12:25]   done
29: [10:12:25] -------------------------------------
29: [10:12:25]     Test github1453: RWMol.clear() should reset the numBonds count.
29: [10:12:25]   done
29: [10:12:25] -------------------------------------
29: [10:12:25]     Test range-based for loops.
29: [10:12:25]   done
29: [10:12:25] -------------------------------------
29: [10:12:25]     Test github1642: Atom index type is too low for big molecules.
11: ..................
11: ----------------------------------------------------------------------
11: Ran 18 tests in 28.314s
11: 
11: OK
 26/213 Test  #11: pyBV ...................................   Passed   30.42 sec
test 30
        Start  30: graphmolcpTest

30: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolcpTest
30: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
30: Test timeout computed to be: 1500
30: 
30: 
30: 
30: COPY
 27/213 Test  #30: graphmolcpTest .........................   Passed    0.20 sec
test 31
        Start  31: graphmolqueryTest

31: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolqueryTest
31: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
31: Test timeout computed to be: 1500
31: [10:12:36] ---------------------- Test1
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test2
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test3
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test4
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test5
31: [10:12:37] Done!
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test issue 2892580
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test github issue 53: query molecules not matching [R]
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test queries using qualifiers instead of ==
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test Github issue 165: radicals not used in atom-atom matching
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test extra atom queries
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test extra bond queries
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test num heteroatom neighbor queries
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test atom type queries
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Test Github #2471: dummy atom queries are flagged as complex
31: [10:12:37] Done!
31: [10:12:37] ---------------------- Testing hasBondTypeQuery() and hasComplexBondTypeQuery()
31: [10:12:37] Done!
 28/213 Test  #31: graphmolqueryTest ......................   Passed    0.19 sec
test 32
        Start  32: graphmolMolOpsTest

32: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolMolOpsTest
32: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
32: Test timeout computed to be: 1500
32: 1 1 2 
32: 1 1 1 
32: 2 1 0.75 
32: path: 2
32: [10:12:37] Warning: conflicting stereochemistry at atom 10 ignored by rule 1a.
32: [10:12:37] Warning: conflicting stereochemistry at atom 10 ignored by rule 1a.
32: [10:12:37] Explicit valence for atom # 0 B, 5, is greater than permitted
32: [10:12:37] Explicit valence for atom # 1 C, 5, is greater than permitted
32: [10:12:37] Explicit valence for atom # 1 C, 5, is greater than permitted
32: [10:12:37] Explicit valence for atom # 1 C, 5, is greater than permitted
32: [10:12:37] Explicit valence for atom # 1 Si, 7, is greater than permitted
32: smi: Cc1ccc(S(=O)(=O)/N=C2\CC(=N\C(C)(C)C)/C2=N\C(C)(C)C)cc1
32: [10:12:38] non-ring atom 0 marked aromatic
32: [10:12:38] non-ring atom 0 marked aromatic
32: [10:12:38] Conflicting single bond directions around double bond at index 17.
32: [10:12:38]   BondStereo set to STEREONONE and single bond directions set to NONE.
32: starting ring finding
32: done
32: starting ring finding
32: done
32: starting ring finding
32: done
32: C/C=N/c1ccc(cc1)c1cc2cc(c1)c1ccc(cc1)N=Cc1ccc(cc1)c1cc(cc(c1)c1ccc(cc1)C)c1ccc(cc1)C=Nc1ccc(cc1)c1cc(cc(c1)c1ccc(cc1)/N=C/C)c1ccc(cc1)N=Cc1ccc(cc1)c1cc(c3ccc(C=Nc4ccc(c5cc6c7ccc(N=Cc8ccc(c9cc(c%10ccc(C=Nc%11ccc2cc%11)cc%10)cc(c9)c2ccc(cc2)C=Nc2ccc(cc2)c2cc(cc(c2)c2ccc(cc2)N=Cc2ccc(cc2)c2cc(cc(c2)c2ccc(cc2)C)c2ccc(cc2)C=Nc2ccc(cc2)c2cc(c9ccc(N=Cc%10ccc(c%11cc(c%12ccc(C=Nc%13ccc(c(c6)c5)cc%13)cc%12)cc(c%11)c5ccc(cc5)C)cc%10)cc9)cc(c2)c2ccc(cc2)/N=C/C)c2ccc(cc2)/N=C/C)cc8)cc7)cc4)cc3)cc(c1)c1ccc(cc1)C
32: starting sanitization
32: done
32: starting sanitization
32: done
32: starting ring finding
32: done
32: starting ring finding
32: done
32: smiles: CC[C@]1(C(=O)c([nH])n)CC[C@](C)(O)CC1
32: [10:12:38] WARNING: not removing hydrogen atom with dummy atom neighbors
32: -------------------------------
32: [10:12:38] Explicit valence for atom # 0 N, 4, is greater than permitted
32: [10:12:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
32: [10:12:38] Can't kekulize mol.  Unkekulized atoms: 6 7 8 9 10
32: [10:12:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
32: [10:12:38] WARNING: merging explicit H queries involved in ORs is not supported. This query will not be merged
32: [10:12:38] WARNING: not removing hydrogen atom with dummy atom neighbors
32: [10:12:41] Maximum BFS search size exceeded.
32: This is likely due to a highly symmetric fused ring system.
32: [10:12:43] Maximum BFS search size exceeded.
32: This is likely due to a highly symmetric fused ring system.
32: F/C=C/Cl
32: [H]/C(F)=C(/[H])Cl
32: F/C=C/Cl
32: F/C=C/Cl
32: C/C(F)=C(/C)Cl
25: Checking against /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_reference.log...
 29/213 Test  #32: graphmolMolOpsTest .....................   Passed    6.68 sec
test 33
        Start  33: graphmoltestChirality

33: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmoltestChirality
33: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
33: Test timeout computed to be: 1500
33: --------------------------
33: --------------------------
33: C/C=C/C(C)Cl
25: All 191 tests passed
33: [10:12:45] Conflicting single bond directions around double bond at index 2.
33: [10:12:45]   BondStereo set to STEREONONE and single bond directions set to NONE.
33: [10:12:45] Conflicting single bond directions around double bond at index 4.
33: [10:12:45]   BondStereo set to STEREONONE and single bond directions set to NONE.
33: [10:12:45] Conflicting single bond directions around double bond at index 15.
33: [10:12:45]   BondStereo set to STEREONONE and single bond directions set to NONE.
33: [10:12:45] Conflicting single bond directions around double bond at index 2.
33: [10:12:45]   BondStereo set to STEREONONE and single bond directions set to NONE.
33: [10:12:45] Conflicting single bond directions around double bond at index 1.
33: [10:12:45]   BondStereo set to STEREONONE and single bond directions set to NONE.
33: --------------------------------------------------
 30/213 Test  #33: graphmoltestChirality ..................   Passed    1.80 sec
test 34
        Start  34: graphmoltestPickler

34: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmoltestPickler
34: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
34: Test timeout computed to be: 1500
34: [10:12:45] -------------------------------------
34: [10:12:45] Testing String Pickle Roundtrips.
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing reading existing pickle file (v2).
25: 
25: Computing MMFF94 energies for /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_hypervalent.sdf...
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing combining molecules using pickles.
34: Atoms:
34: 	0 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
34: 	1 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
34: 	2 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
34: 	3 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
34: 	4 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
34: 	5 8 O chg: 0  deg: 2 exp: 2 imp: 0 hyb: 4 arom?: 0 chi: 0
34: 	6 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
34: Bonds:
34: 	0 0->1 order: 1 conj?: 0 aromatic?: 0
34: 	1 1->2 order: 1 conj?: 0 aromatic?: 0
34: 	2 2->0 order: 1 conj?: 0 aromatic?: 0
34: 	3 3->4 order: 1 conj?: 0 aromatic?: 0
34: 	4 4->5 order: 1 conj?: 0 aromatic?: 0
34: 	5 5->6 order: 1 conj?: 0 aromatic?: 0
34: 	6 6->3 order: 1 conj?: 0 aromatic?: 0
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing Issue164: Roundtrip Pickle Failure.
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing Issue219: Pickle Failure with Conformations.
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing Issue220: Pickle problems with bond stereochemistry.
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing query serialization.
34: [10:12:46] C=[$(C=O)]
34: [10:12:46] S(=O)(=O)-[C&H2][F,Br,I,Cl] S(=O)(=O)-[C&H2][F,Br,I,Cl]
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing radical handling in pickles.
34: [10:12:46] 	done
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing sf.net issue 2788233.
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing sf.net issue 3202580.
34:   mass! 13.0034
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing sf.net issue 3316407.
34: [10:12:46] 	done
34: [10:12:46] -------------------------------------
34: [10:12:46] Testing sf.net issue 3496759.
34: smi match: *C *C
34: smi match: **=* **=*
34: smi match: [N-]=[N+]=NC=O [N-]=[N+]=NC=O
34: smi match: *OS(=O)OC *OS(=O)OC
34: smi match: *S(=O)(=O)OC *S(=O)(=O)OC
34: smi match: O=COC=O O=COC=O
34: smi match: OO OO
34: smi match: O=COc1c(F)c(F)c(F)c(F)c1F O=COc1c(F)c(F)c(F)c(F)c1F
34: smi match: O=COc1ccc(N(=O)=O)cc1 O=COc1ccc(N(=O)=O)cc1
34: smi match: nnnOC=O nnnOC=O
34: smi match: *=C=N *=C=N
34: smi match: OS(=O)(=O)C(F)(F)F OS(=O)(=O)C(F)(F)F
34: smi match: SP(S)=S SP(S)=S
34: smi match: NP(N)(N)=O NP(N)(N)=O
34: smi match: cN=[N+]=[N-] cN=[N+]=[N-]
34: smi match: *CC=O *CC=O
34: smi match: NNC=O NNC=O
34: smi match: * *
34: smi match: C=P C=P
34: smi match: CC(=N)Cl CC(=N)Cl
34: smi match: N=O N=O
34: smi match: ** **
34: smi match: N=C=N N=C=N
34: smi match: [C-]#[NH+] [C-]#[NH+]
34: smi match: O=CON(C=O)C=O O=CON(C=O)C=O
34: smi match: N#CC[OH] N#CC[OH]
34: smi match: N#CC=O N#CC=O
34: smi match: N#CS(=O)=O N#CS(=O)=O
34: smi match: CCOP(=O)(C#N)OCC CCOP(=O)(C#N)OCC
34: smi match: N#CN=N N#CN=N
34: smi match: N=NCC=O N=NCC=O
34: smi match: CCCCCCC CCCCCCC
34: smi match: OCCOCCO OCCOCCO
34: smi match: SS SS
34: smi match: [SH] [SH]
34: smi match: *1CC1 *1CC1
34: smi match: [OH]ccc([OH])c[OH] [OH]ccc([OH])c[OH]
34: smi match: [OH]cc([OH])c[OH] [OH]cc([OH])c[OH]
34: smi match: NC(=S)N=N NC(=S)N=N
34: smi match: N#CS N#CS
34: smi match: cC[N+] cC[N+]
34: smi match: C*C=S C*C=S
34: smi match: N[CH2]C#N N[CH2]C#N
34: smi match: O=C1CCO1 O=C1CCO1
34: smi match: O=P([OH])OP(=O)[OH] O=P([OH])OP(=O)[OH]
34: smi match: O=C1CCN1 O=C1CCN1
34: smi match: O=C1C~CC(=O)C~C1 O=C1C~CC(=O)C~C1
34: smi match: C=CC=CC=CC=C C=CC=CC=CC=C
34: smi match: C1CCC(OC2CCC3CCCCC3C2)OC1 C1CCC(OC2CCC3CCCCC3C2)OC1
34: smi match: O=C1NCC2CCCCC21 O=C1NCC2CCCCC21
34: smi match: O=C1CCCC(=O)N1 O=C1CCCC(=O)N1
34: smi match: C1CCC(C2CCCO2)OC1 C1CCC(C2CCCO2)OC1
34: smi match: [OH]C1Cc2c([OH])cc([OH])cc2OC1c1ccc([OH])c([OH])c1 [OH]C1Cc2c([OH])cc([OH])cc2OC1c1ccc([OH])c([OH])c1
34: smi match: C1CC2CCC(O1)O2 C1CC2CCC(O1)O2
34: smi match: cN(=O)~O cN(=O)~O
34: smi match: *[CH2]N1C(=O)CCC1=O *[CH2]N1C(=O)CCC1=O
34: smi match: N~NC=O N~NC=O
34: smi match: *=N~C *=N~C
34: smi match: CO*(=O)=O CO*(=O)=O
34: smi match: * *
34: smi match: * *
34: smi match: *C=C *C=C
34: smi match: N#CS N#CS
34: smi match: *C=S *C=S
34: smi match: *N *N
34: smi match: *C(=C)C=O *C(=C)C=O
34: smi match: *C#C *C#C
34: smi match: N#CCO N#CCO
34: smi match: O=N(=O)CCO O=N(=O)CCO
34: smi match: N=CS N=CS
34: smi match: O=CNC(O)C=O O=CNC(O)C=O
34: smi match: C=C(C=O)C=O C=C(C=O)C=O
34: smi match: N=CC=O N=CC=O
34: smi match: *C(C=O)C=O *C(C=O)C=O
34: smi match: *C(C=O)=C(*)C=O *C(C=O)=C(*)C=O
34: smi match: O=CC=CC=O O=CC=CC=O
34: smi match: O=CN(O)C=O O=CN(O)C=O
34: smi match: O=CN(S)C=O O=CN(S)C=O
34: smi match: O=CNC=O O=CNC=O
34: smi match: O=CNN=O O=CNN=O
34: smi match: O=CNNC=O O=CNNC=O
34: smi match: O=CNOC=O O=CNOC=O
34: smi match: O=CS O=CS
34: smi match: O=CSC=S O=CSC=S
34: smi match: S=CS S=CS
34: smi match: C=O C=O
34: smi match: *C=N *C=N
34: smi match: CCCCCCC CCCCCCC
34: smi match: CN=O CN=O
34: smi match: CS(=O)(=O)O CS(=O)(=O)O
34: smi match: O=C1CCO1 O=C1CCO1
34: smi match: C=C(S)[SH]=O C=C(S)[SH]=O
34: smi match: C=CCO C=CCO
34: smi match: C=CC=N C=CC=N
34: smi match: C=CC=O C=CC=O
34: smi match: C=CC(=O)C=C C=CC(=O)C=C
34: smi match: C=CC=S C=CC=S
34: smi match: C=CC(=S)S C=CC(=S)S
34: smi match: *C=C(*)C=C *C=C(*)C=C
34: smi match: C=CC=N C=CC=N
34: smi match: *N(*)C=C *N(*)C=C
34: smi match: C=CN(=O)=O C=CN(=O)=O
34: smi match: C=CN(O)=O C=CN(O)=O
34: smi match: C=CO C=CO
34: smi match: C=COC=O C=COC=O
34: smi match: C=CS C=CS
34: smi match: C=C[SH](=O)=O C=C[SH](=O)=O
34: smi match: C=NCO C=NCO
34: smi match: C=NC=O C=NC=O
34: smi match: C=NN C=NN
34: smi match: C=NN=C C=NN=C
34: smi match: C=NO C=NO
34: smi match: C=NOC=O C=NOC=O
34: smi match: C=N=O C=N=O
34: smi match: N#CS N#CS
34: smi match: *CN=O *CN=O
34: smi match: NCN NCN
34: smi match: ON=CCN=O ON=CCN=O
34: smi match: NC(S)=N[SH](=O)=O NC(S)=N[SH](=O)=O
34: smi match: N=C(N)S N=C(N)S
34: smi match: NC(=O)Oc1ccccc1 NC(=O)Oc1ccccc1
34: smi match: NC=S NC=S
34: smi match: NC(N)=S NC(N)=S
34: smi match: C=CN C=CN
34: smi match: NOC=O NOC=O
34: smi match: C1CN1 C1CN1
34: smi match: O=C1NNNN1 O=C1NNNN1
34: smi match: N=C(N)C(=N)N N=C(N)C(=N)N
34: smi match: N=C(N)O N=C(N)O
34: smi match: N=C(N)C(=N)S N=C(N)C(=N)S
34: smi match: *C=N *C=N
34: smi match: N=CC=O N=CC=O
34: smi match: N=CS N=CS
34: smi match: N=C=N N=C=N
34: smi match: N=C=O N=C=O
34: smi match: N=C=S N=C=S
34: smi match: NOC(=O)O NOC(=O)O
34: smi match: *C(O)=S *C(O)=S
34: smi match: C=CO C=CO
34: smi match: ON=CC=NO ON=CC=NO
34: smi match: *C[SH](=O)=O *C[SH](=O)=O
34: smi match: OS(=O)=O OS(=O)=O
34: smi match: N#CS N#CS
34: smi match: C=C(S)S C=C(S)S
34: smi match: N=C(N)S N=C(N)S
34: smi match: N=C(S)S N=C(S)S
34: smi match: NC(=S)S NC(=S)S
34: smi match: O=CNS O=CNS
34: smi match: S S
34: smi match: [SiH4] [SiH4]
34: smi match: NS NS
34: smi match: NCN NCN
34: smi match: cC(c)(O)O cC(c)(O)O
34: smi match: *C(c)O *C(c)O
34: smi match: C=CS(c)(=O)=O C=CS(c)(=O)=O
34: smi match: cS(=O)(=O)O cS(=O)(=O)O
34: smi match: *c1ccccn1=O *c1ccccn1=O
34: smi match: *c1ccccn1 *c1ccccn1
34: smi match: *c1nccccn1 *c1nccccn1
34: smi match: C1COCOC1 C1COCOC1
34: smi match: C=S C=S
34: smi match: c=S c=S
34: smi match: S=CS S=CS
34: smi match: C=CN(=O)=O C=CN(=O)=O
34: smi match: C=CN(=O)O C=CN(=O)O
34: smi match: N=CC=O N=CC=O
34: smi match: C=CS C=CS
34: smi match: SC(S)(S)S SC(S)(S)S
34: smi match: OS(O)(O)O OS(O)(O)O
34: smi match: O=N(=O)C[SH](=O)=O O=N(=O)C[SH](=O)=O
34: smi match: O=N(O)C[SH](=O)=O O=N(O)C[SH](=O)=O
34: smi match: N#CS N#CS
34: smi match: C=NO C=NO
34: smi match: C=N[SH]=N C=N[SH]=N
34: smi match: O=C(S)S O=C(S)S
34: smi match: N=C(S)S N=C(S)S
34: smi match: N=C(=N)S N=C(=N)S
34: smi match: O=N=O O=N=O
34: smi match: O=NO O=NO
34: smi match: ONO ONO
34: smi match: C1SCS1 C1SCS1
34: smi match: N=C=S N=C=S
34: smi match: N=C=N N=C=N
34: smi match: C1N=N1 C1N=N1
34: smi match: *CS *CS
34: smi match: SC(S)=C(S)S SC(S)=C(S)S
34: smi match: N=CC=NO N=CC=NO
34: smi match: N#CCC#N N#CCC#N
34: smi match: CON=O CON=O
34: smi match: C=CN C=CN
34: smi match: C=N[SH](=O)=O C=N[SH](=O)=O
34: smi match: NN=O NN=O
34: smi match: NC(=O)S NC(=O)S
34: smi match: N#CS N#CS
34: smi match: NC(=O)C(N)=O NC(=O)C(N)=O
34: smi match: c=N c=N
34: smi match: C1COCO1 C1COCO1
34: smi match: C=NN[SH](=O)=O C=NN[SH](=O)=O
34: smi match: O=CC=O O=CC=O
34: smi match: O=CNOC=O O=CNOC=O
34: smi match: O=C1C=CC(=O)C=C1 O=C1C=CC(=O)C=C1
34: smi match: ONO ONO
34: smi match: ON(~O)~O ON(~O)~O
34: smi match: OC1COC(O)C1 OC1COC(O)C1
34: smi match: OC1CCOC1O OC1CCOC1O
34: smi match: OC1CCOC(O)C1 OC1CCOC(O)C1
34: smi match: N=[N+]=N N=[N+]=N
34: smi match: N#CN N#CN
34: smi match: C=NN=C C=NN=C
34: smi match: *CCN(C)C *CCN(C)C
34: smi match: CNN CNN
34: smi match: *CC *CC
34: smi match: OCS OCS
34: smi match: C1NO1 C1NO1
34: smi match: COS(C)(=O)=O COS(C)(=O)=O
34: smi match: C1CO1 C1CO1
34: smi match: *c1-c-c-ccN1 *c1-c-c-ccN1
34: smi match: *C(*)=C *C(*)=C
34: smi match: N#[NH+] N#[NH+]
34: smi match: C#NO C#NO
34: smi match: OOO OOO
34: smi match: OO OO
34: smi match: O~Cl(~O)~O O~Cl(~O)~O
34: smi match: O~Cl(~O)(~O)~O O~Cl(~O)(~O)~O
34: smi match: [OH]~C(~O)~O [OH]~C(~O)~O
34: smi match: *N *N
34: smi match: *P *P
34: smi match: *S *S
34: smi match: *C(*)(*)C=C *C(*)(*)C=C
34: smi match: *C(*)(*)C=C *C(*)(*)C=C
34: smi match: *C(*)C=C *C(*)C=C
34: smi match: *CC=C *CC=C
34: smi match: CN=C=O CN=C=O
34: smi match: CN=C=S CN=C=S
34: smi match: *C=O *C=O
34: smi match: N=N N=N
34: smi match: SS SS
34: smi match: O=C1CCNC(=O)O1 O=C1CCNC(=O)O1
34: smi match: CSC(C)=N CSC(C)=N
34: smi match: COC(C)=N COC(C)=N
34: smi match: C=C=C C=C=C
34: smi match: *C(=O)OC=O *C(=O)OC=O
34: smi match: C=CC#N C=CC#N
34: smi match: C=CC=O C=CC=O
34: smi match: CC=CC(C)=O CC=CC(C)=O
34: smi match: CC=CC(=O)OCC CC=CC(=O)OCC
34: smi match: C#CC#N C#CC#N
34: smi match: C#CC=O C#CC=O
34: smi match: C#CC(=O)OCC C#CC(=O)OCC
34: smi match: C#CC=O C#CC=O
34: smi match: *C(=O)C#C *C(=O)C#C
34: smi match: C=CC=O C=CC=O
34: smi match: *C(*)(*)O *C(*)(*)O
34: smi match: COS(O)(=O)=O COS(O)(=O)=O
34: smi match: CS(=O)(=O)[O-] CS(=O)(=O)[O-]
34: smi match: NS(=O)(=O)[O-] NS(=O)(=O)[O-]
34: smi match: *C(*)(*)C=O *C(*)(*)C=O
34: smi match: *C(*)(*)C=O *C(*)(*)C=O
34: smi match: *C(*)C=O *C(*)C=O
34: smi match: *CC=O *CC=O
34: smi match: *C(*)(*)[SH](=O)=O *C(*)(*)[SH](=O)=O
34: smi match: *C(*)(*)[SH](=O)=O *C(*)(*)[SH](=O)=O
34: smi match: *C(*)[SH](=O)=O *C(*)[SH](=O)=O
34: smi match: *C[SH](=O)=O *C[SH](=O)=O
34: smi match: * *
34: smi match: *1CC1 *1CC1
34: smi match: O=COC=O O=COC=O
34: smi match: N=C=O N=C=O
34: smi match: N=C=S N=C=S
34: smi match: O~O O~O
34: smi match: N~[SiH4] N~[SiH4]
34: smi match: *P *P
34: smi match: C=N=N C=N=N
34: smi match: *N#[NH+] *N#[NH+]
34: smi match: *S* *S*
34: smi match: ** **
34: smi match: *CC* *CC*
34: smi match: *O[SiH3] *O[SiH3]
34: smi match: *OS(*)~O *OS(*)~O
34: smi match: N~N~O N~N~O
34: smi match: *N(~O)(~O)~O *N(~O)(~O)~O
34: smi match: *[N+](=C)[O-] *[N+](=C)[O-]
34: smi match: * *
34: smi match: *C(*)NCN(*)* *C(*)NCN(*)*
34: smi match: *OCC#N *OCC#N
34: smi match: **C=C **C=C
34: smi match: C=C[O-] C=C[O-]
34: smi match: C=CO C=CO
34: smi match: * *
34: smi match: O=CON1C(=O)CCC1=O O=CON1C(=O)CCC1=O
34: smi match: O=COn1ccnc1 O=COn1ccnc1
34: smi match: O=COc1c(F)c(F)c(F)c(F)c1F O=COc1c(F)c(F)c(F)c(F)c1F
34: smi match: CC(C)(C)S CC(C)(C)S
34: smi match: [CH2][CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~C [CH2][CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~C
34: smi match: [CH]=O [CH]=O
34: smi match: C~[CH2]~[CH2]~[CH2]~[CH2]~[CH2]~C C~[CH2]~[CH2]~[CH2]~[CH2]~[CH2]~C
34: smi match: SS SS
34: smi match: [SH] [SH]
34: smi match: *C* *C*
34: smi match: * *
34: smi match: C[nH3+] C[nH3+]
34: smi match: cC(=N)[NH2] cC(=N)[NH2]
34: smi match: O=CN[OH] O=CN[OH]
34: smi match: NN NN
34: smi match: * *
34: smi match: *OP(=O)O* *OP(=O)O*
34: smi match: * *
34: smi match: * *
34: smi match: * *
34: smi match: *N=C(*)* *N=C(*)*
34: smi match: *C(*)(*)C=O *C(*)(*)C=O
34: smi match: CSC=O CSC=O
34: smi match: * *
34: smi match: O=CCl O=CCl
34: smi match: *** ***
34: smi match: *C=O *C=O
34: smi match: C[OH] C[OH]
34: smi match: C[OH] C[OH]
34: smi match: C[OH] C[OH]
34: smi match: C[OH] C[OH]
34: smi match: C[CH]=O C[CH]=O
34: smi match: *=* *=*
34: smi match: *C *C
34: smi match: C#C C#C
34: smi match: *[CH]C=C *[CH]C=C
34: smi match: cCC(=O)[OH] cCC(=O)[OH]
34: smi match: *C(*)(*)C(=O)[OH] *C(*)(*)C(=O)[OH]
34: smi match: CC(=O)C(=O)[OH] CC(=O)C(=O)[OH]
34: smi match: C=CC(=O)[OH] C=CC(=O)[OH]
34: smi match: N#CC(=O)[OH] N#CC(=O)[OH]
34: smi match: O=C([OH])CN(~O)~O O=C([OH])CN(~O)~O
34: smi match: *N(*)C*=O *N(*)C*=O
34: smi match: O=*C[OH] O=*C[OH]
34: smi match: *=C*=O *=C*=O
34: smi match: *=CC#N *=CC#N
34: smi match: *C[OH] *C[OH]
34: smi match: ** **
34: smi match: *C[OH] *C[OH]
34: smi match: *C(*)=O *C(*)=O
34: smi match: * *
34: smi match: *CC(=O)[OH] *CC(=O)[OH]
34: smi match: CC(=O)OC(C)=O CC(=O)OC(C)=O
34: smi match: *c *c
34: smi match: CN(C)c CN(C)c
34: smi match: c c
34: smi match: *c *c
34: smi match: *c *c
34: smi match: **:*cF **:*cF
34: smi match: cB([OH])[OH] cB([OH])[OH]
34: smi match: N~N~N N~N~N
34: smi match: *N=N* *N=N*
34: smi match: *CC[OH] *CC[OH]
34: smi match: *CC[OH] *CC[OH]
34: smi match: *=CCC(=O)[OH] *=CCC(=O)[OH]
34: smi match: O=C([OH])CC[OH] O=C([OH])CC[OH]
34: smi match: *CCC(=O)[OH] *CCC(=O)[OH]
34: smi match: CC(=O)CC(=O)[OH] CC(=O)CC(=O)[OH]
34: smi match: *OC(=O)CC(C)=O *OC(=O)CC(C)=O
34: smi match: *OC(*)=O *OC(*)=O
34: smi match: *C(=O)[OH] *C(=O)[OH]
34: smi match: O=C[OH] O=C[OH]
34: smi match: *OC(=O)O* *OC(=O)O*
34: smi match: * *
34: smi match: *OC(=O)Cl *OC(=O)Cl
34: smi match: *C#N *C#N
34: smi match: NCC(=O)NCC=O NCC(=O)NCC=O
34: smi match: SS SS
34: smi match: * *
34: smi match: *=* *=*
34: smi match: *=* *=*
34: smi match: *=* *=*
34: smi match: *=* *=*
34: smi match: C1CO1 C1CO1
34: smi match: *OC(*)=O *OC(*)=O
34: smi match: * *
34: smi match: *O*[OH] *O*[OH]
34: smi match: COC(C)(C)O COC(C)(C)O
34: smi match: *[OH] *[OH]
34: smi match: ** **
34: smi match: C=N[NH2] C=N[NH2]
34: smi match: C=NC=O C=NC=O
34: smi match: * *
34: smi match: C#NC C#NC
34: smi match: CN=C=O CN=C=O
34: smi match: CN=C=S CN=C=S
34: smi match: *OC(*)(*)O* *OC(*)(*)O*
34: smi match: *C(*)=O *C(*)=O
34: smi match: C~C~C~C~C~C~C C~C~C~C~C~C~C
34: smi match: *~*=O *~*=O
34: smi match: *~*=O *~*=O
34: smi match: OC(=O)CC(=O)[OH] OC(=O)CC(=O)[OH]
34: smi match: * *
34: smi match: *C#N *C#N
34: smi match: *N(=O)~O *N(=O)~O
34: smi match: N N
34: smi match: OC(=O)C(O)=O OC(=O)C(O)=O
34: smi match: C=NO C=NO
34: smi match: O~O O~O
34: smi match: c[OH] c[OH]
34: smi match: O=P(~[OH])~O O=P(~[OH])~O
34: smi match: CO~P(=O)~O CO~P(=O)~O
34: smi match: O=P(~[OH])(~O)~O O=P(~[OH])(~O)~O
34: smi match: CO~P(=O)(~O)~O CO~P(=O)(~O)~O
34: smi match: O=P(~O)~O O=P(~O)~O
34: smi match: O=P(~O)(~O)~O O=P(~O)(~O)~O
34: smi match: C[NH2] C[NH2]
34: smi match: O~*1~**~*(~O)~**~1 O~*1~**~*(~O)~**~1
34: smi match: * *
34: smi match: *1~*~*~C2~C(~*~1)~*~*~C1~C3~*~*~*~C~3~*~*~C~2~1 *1~*~*~C2~C(~*~1)~*~*~C1~C3~*~*~*~C~3~*~*~C~2~1
34: smi match: CS(C)~O CS(C)~O
34: smi match: CS(C)(~O)~O CS(C)(~O)~O
34: smi match: CS(N)(~O)~O CS(N)(~O)~O
34: smi match: CS([OH])(~O)~O CS([OH])(~O)~O
34: smi match: COS(C)(~O)~O COS(C)(~O)~O
34: smi match: *S(C)(~O)~O *S(C)(~O)~O
34: smi match: CN(C)C CN(C)C
34: smi match: *c1nnc(=N)s1 *c1nnc(=N)s1
34: smi match: *C(*)=S *C(*)=S
34: smi match: *OC(*)=S *OC(*)=S
34: smi match: * *
34: smi match: C[SH] C[SH]
34: smi match: c[SH] c[SH]
34: smi match: NC(N)=S NC(N)=S
34: smi match: * *
34: smi match: ***** *****
34: smi match: NC(N)=O NC(N)=O
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing sf.net issue 280.
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing sf.net issue 285.
34: [10:12:48] 	done
34: [10:12:48] 	done
34: [10:12:48] 	done
34: [10:12:48] 	done
34: [10:12:48] 	done
34: [10:12:48] 	done
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing Github2441: Add RDProps interface to Conformers.
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing Issue2510: Pickle Confs as double.
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing Github #2465: Negative atom-map numbers cause depickling to fail.
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing loading pickled mols with conformers
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing conformer reading/writing options
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing property reading options
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing property reading options
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing boost::serialization integration
34: [10:12:48] 	done
34: [10:12:48] -------------------------------------
34: [10:12:48] Testing github issue 6036
 31/213 Test  #34: graphmoltestPickler ....................   Passed    2.90 sec
test 35
        Start  35: graphmoltestPicklerGlobalSetting

35: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmoltestPicklerGlobalSetting
35: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
35: Test timeout computed to be: 1500
35: [10:12:48] 	done
 32/213 Test  #35: graphmoltestPicklerGlobalSetting .......   Passed    0.21 sec
test 36
        Start  36: graphmolIterTest

36: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolIterTest
36: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
36: Test timeout computed to be: 1500
 33/213 Test  #36: graphmolIterTest .......................   Passed    0.19 sec
test 37
        Start  37: hanoiTest

37: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/hanoiTest
37: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
37: Test timeout computed to be: 1500
 34/213 Test  #37: hanoiTest ..............................   Passed   18.97 sec
test 38
        Start  38: graphmolMemTest1

38: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolMemTest1
38: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
38: Test timeout computed to be: 1500
 35/213 Test  #38: graphmolMemTest1 .......................   Passed    0.40 sec
test 39
        Start  39: resMolSupplierTest

39: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/resMolSupplierTest
39: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
39: Test timeout computed to be: 1500
25: Checking against /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_reference.log...
25: All 191 tests passed
25: 
25: Computing MMFF94 energies for /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_dative.smi...
 36/213 Test  #39: resMolSupplierTest .....................   Passed   28.95 sec
test 40
        Start  40: molBundleTest

40: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/molBundleTest
40: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
40: Test timeout computed to be: 1500
 37/213 Test  #40: molBundleTest ..........................   Passed    0.47 sec
test 41
        Start  41: testSGroup

41: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/testSGroup
41: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
41: Test timeout computed to be: 1500
 38/213 Test  #41: testSGroup .............................   Passed    0.27 sec
test 42
        Start  42: test-valgrind

42: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/test-valgrind
42: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
42: Test timeout computed to be: 1500
 39/213 Test  #42: test-valgrind ..........................   Passed    0.19 sec
test 43
        Start  43: graphmolTestsCatch

43: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolTestsCatch
43: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
43: Test timeout computed to be: 1500
43: [10:13:38] WARNING: not removing hydrogen atom without neighbors
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] Explicit valence for atom # 1 N, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 1 N, 6, is greater than permitted
43: [10:13:38] Explicit valence for atom # 1 N, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 1 N, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 2 O, 3, is greater than permitted
43: [10:13:38] Explicit valence for atom # 2 O, 3, is greater than permitted
43: [10:13:38] non-ring atom 2 marked aromatic
43: [10:13:38] non-ring atom 2 marked aromatic
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 1 2 3
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 1 2 3
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2
43: [10:13:38] Explicit valence for atom # 1 O, 3, is greater than permitted
43: [10:13:38] Explicit valence for atom # 4 F, 2, is greater than permitted
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 6 7 8
43: [10:13:38] Explicit valence for atom # 1 C, 5, is greater than permitted
43: [10:13:38] WARNING: not removing hydrogen atom with dummy atom neighbors
43: [10:13:38] WARNING: not removing hydrogen atom with dummy atom neighbors
43: [10:13:38] WARNING: not removing hydrogen atom with wedged bond
43: [10:13:38] WARNING: not removing hydrogen atom without neighbors
43: [10:13:38] WARNING: not removing hydrogen atom without neighbors
43: [10:13:38] WARNING: not removing hydrogen atom without neighbors
43: [10:13:38] WARNING: not removing hydrogen atom without neighbors
43: [10:13:38] Unreasonable formal charge on hydrogen # 0.
43: [10:13:38] batchEdit mode already enabled, ignoring additional call to beginBatchEdit()
43: [10:13:38] batchEdit mode already enabled, ignoring additional call to beginBatchEdit()
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: no atom
43: Violation occurred on line 183 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: at
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: atom not associated with a molecule
43: Violation occurred on line 184 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: at->hasOwningMol()
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: atom not associated with this molecule
43: Violation occurred on line 185 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: &at->getOwningMol() == this
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: no atom
43: Violation occurred on line 382 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: at
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: atom not associated with a molecule
43: Violation occurred on line 383 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: at->hasOwningMol()
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: atom not associated with this molecule
43: Violation occurred on line 384 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: &at->getOwningMol() == this
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: no atom
43: Violation occurred on line 390 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: at
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: atom not associated with a molecule
43: Violation occurred on line 391 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: at->hasOwningMol()
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: atom not associated with this molecule
43: Violation occurred on line 392 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: &at->getOwningMol() == this
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: null atom passed in
43: Violation occurred on line 406 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: atom_pin
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: cannot take ownership of an atom which already has an owner
43: Violation occurred on line 407 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: !takeOwnership || !atom_pin->hasOwningMol() || &atom_pin->getOwningMol() == this
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: cannot take ownership of an bond which already has an owner
43: Violation occurred on line 433 in file ./Code/GraphMol/ROMol.cpp
43: Failed Expression: !takeOwnership || !bond_pin->hasOwningMol() || &bond_pin->getOwningMol() == this
43: ****
43: 
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] WARNING: not removing hydrogen atom without neighbors
43: [10:13:38] Explicit valence for atom # 1 F greater than permitted
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: plain atoms have no Query
43: Violation occurred on line 626 in file ./Code/GraphMol/Atom.cpp
43: Failed Expression: 0
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: plain atoms have no Query
43: Violation occurred on line 631 in file ./Code/GraphMol/Atom.cpp
43: Failed Expression: 0
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: plain bonds have no Query
43: Violation occurred on line 206 in file ./Code/GraphMol/Bond.cpp
43: Failed Expression: 0
43: ****
43: 
43: [10:13:38] 
43: 
43: ****
43: Pre-condition Violation
43: plain bonds have no query
43: Violation occurred on line 227 in file ./Code/GraphMol/Bond.cpp
43: Failed Expression: 0
43: ****
43: 
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 6 7 8 9 10
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 6 7 8 9 10
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
43: [10:13:38] Unusual charge on atom 0 number of radical electrons set to zero
43: [10:13:38] Unusual charge on atom 0 number of radical electrons set to zero
43: [10:13:38] Unusual charge on atom 0 number of radical electrons set to zero
43: [10:13:38] non-ring atom 0 marked aromatic
43: [10:13:38] non-ring atom 0 marked aromatic
43: [10:13:38] Explicit valence for atom # 1 C, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 9 C, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 3 N, 4, is greater than permitted
43: [10:13:38] Explicit valence for atom # 15 C, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 11 C, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 9 C, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 9 C, 5, is greater than permitted
43: [10:13:38] Explicit valence for atom # 9 C, 6, is greater than permitted
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 7
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 3
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 3 7
43: [10:13:38] Can't kekulize mol.  Unkekulized atoms: 3 7
43: [10:13:38] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
43: [10:13:38] Explicit valence for atom # 1 O, 3, is greater than permitted
43: [10:13:38] WARNING: merging explicit H queries involved in ORs is not supported. This query will not be merged
43: [10:13:38] WARNING: merging explicit H queries involved in ORs is not supported. This query will not be merged
43: ===============================================================================
43: All tests passed (1393 assertions in 85 test cases)
43: 
 40/213 Test  #43: graphmolTestsCatch .....................   Passed    0.77 sec
test 44
        Start  44: graphmolOrganometallicsCatch

44: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolOrganometallicsCatch
44: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
44: Test timeout computed to be: 1500
44: ===============================================================================
44: All tests passed (62 assertions in 6 test cases)
44: 
 41/213 Test  #44: graphmolOrganometallicsCatch ...........   Passed    0.44 sec
test 45
        Start  45: graphmolSGroupCatch

45: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolSGroupCatch
45: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
45: Test timeout computed to be: 1500
45: ===============================================================================
45: All tests passed (120 assertions in 6 test cases)
45: 
 42/213 Test  #45: graphmolSGroupCatch ....................   Passed    0.32 sec
test 46
        Start  46: graphmolAdjustQueryCatch

46: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/graphmolAdjustQueryCatch
46: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
46: Test timeout computed to be: 1500
46: ===============================================================================
46: All tests passed (281 assertions in 10 test cases)
46: 
 43/213 Test  #46: graphmolAdjustQueryCatch ...............   Passed    0.50 sec
test 47
        Start  47: chiralityTestsCatch

47: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/chiralityTestsCatch
47: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
47: Test timeout computed to be: 1500
47: [10:13:40]  unable to set wavy bonds for double bonds: 3
47: [10:13:40] Warning: molecule is tagged as 3D, but all Z coords are zero
47: [10:13:40] Warning: molecule is tagged as 3D, but all Z coords are zero
47: [10:13:40] Warning: molecule is tagged as 3D, but all Z coords are zero
47: [10:13:40] Warning: molecule is tagged as 3D, but all Z coords are zero
47: [10:13:40] Warning: molecule is tagged as 3D, but all Z coords are zero
47: [10:13:40] Warning: molecule is tagged as 3D, but all Z coords are zero
47: [10:13:40] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
47: [10:13:40] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
47: ===============================================================================
47: All tests passed (1730 assertions in 58 test cases)
47: 
 44/213 Test  #47: chiralityTestsCatch ....................   Passed    0.78 sec
test 48
        Start  48: canonTestsCatch

48: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/canonTestsCatch
48: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
48: Test timeout computed to be: 1500
48: ===============================================================================
48: All tests passed (106 assertions in 5 test cases)
48: 
 45/213 Test  #48: canonTestsCatch ........................   Passed    0.30 sec
test 49
        Start  49: moliteratorTestsCatch

49: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/moliteratorTestsCatch
49: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
49: Test timeout computed to be: 1500
49: ===============================================================================
49: All tests passed (14 assertions in 4 test cases)
49: 
 46/213 Test  #49: moliteratorTestsCatch ..................   Passed    0.27 sec
test 50
        Start  50: queryTestsCatch

50: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/queryTestsCatch
50: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol
50: Test timeout computed to be: 1500
50: ===============================================================================
50: All tests passed (10 assertions in 1 test case)
50: 
 47/213 Test  #50: queryTestsCatch ........................   Passed    0.25 sec
test 51
        Start  51: smiTest1

51: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/smiTest1
51: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse
51: Test timeout computed to be: 1500
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] WARNING: not removing hydrogen atom without neighbors
51: [10:13:42] Invalid chiral specification on atom 0
51: [10:13:42] Invalid chiral specification on atom 0
51: [10:13:42] Invalid chiral specification on atom 0
51: [10:13:42] Invalid chiral specification on atom 0
51: [10:13:42] Invalid chiral specification on atom 0
51: [10:13:42] SMILES Parse Error: unclosed ring for input: 'C1.C11.C'
51: [10:13:42] SMILES Parse Error: unclosed ring for input: 'C1C.CC11CCC'
51: --C1CCC2(CC1)CCCCC2CCC1CCCC1
51: smi: ClC1CCCCC1
51: smi: ClC1CCCCC1
51: smi: ClC1CCCCC1Br
51: smi: c1ccccc1
51: smi: c1ccncc1
51: smi: c1cc[nH]c1
51: smi: c1cc[nH]c1
51: smi: c1cc[pH]c1
51: CbC(aC)aC
51: CaC(bC)aC
51: CbC(bC)aC
51: O.C
51: C=C1CC[C@@H]2O[C@@]2(C)CC[C@@](N)(C(C)C)C=C[C@](C)(O)CC[C@@H]1O C=C1CC[C@@H]2O[C@@]2(C)CC[C@@](N)(C(C)C)C=C[C@](C)(O)CC[C@@H]1O
51: [10:13:43] SMILES Parse Error: syntax error while parsing: c%()ccccc%()
51: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'c%()ccccc%()' for input: 'c%()ccccc%()'
51: [10:13:43] SMILES Parse Error: syntax error while parsing: c%(100000)ccccc%(100000)
51: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'c%(100000)ccccc%(100000)' for input: 'c%(100000)ccccc%(100000)'
51: [10:13:43] SMILES Parse Error: duplicated ring closure 1 bonds atom 2 to itself for input: 'C1CC111'
51: [10:13:43] SMILES Parse Error: ring closure 1 duplicates bond between atom 0 and atom 1 for input: 'C1C1'
51: [10:13:43] SMILES Parse Error: syntax error while parsing: COc(c1)cccc1C#
51: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'COc(c1)cccc1C#' for input: 'COc(c1)cccc1C#'
51: [10:13:43] SMARTS Parse Error: syntax error while parsing: COc(c1)cccc1C#
51: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS 'COc(c1)cccc1C#' for input: 'COc(c1)cccc1C#'
51: [10:13:43] SMILES Parse Error: syntax error while parsing: COc(c1)cccc1C#
51: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'COc(c1)cccc1C#' for input: 'COc(c1)cccc1C#'
51: [10:13:43] SMARTS Parse Error: syntax error while parsing: COc(c1)cccc1C#
51: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS 'COc(c1)cccc1C#' for input: 'COc(c1)cccc1C#'
51: [10:13:43] SMILES Parse Error: syntax error while parsing: COc(c1)cccc1C#
51: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'COc(c1)cccc1C#' for input: 'COc(c1)cccc1C#'
51: [10:13:43] SMARTS Parse Error: syntax error while parsing: COc(c1)cccc1C#
51: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS 'COc(c1)cccc1C#' for input: 'COc(c1)cccc1C#'
51: C=c1s/c2n(c1=O)CCCCCCC\N=2
51: C1=C\C/C=C2C3=C\C/C=C\C=C/C/3C\2\C=C/1
51: [10:13:43] SMILES Parse Error: extra close parentheses while parsing: C)
51: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'C)' for input: 'C)'
 48/213 Test  #51: smiTest1 ...............................   Passed    1.71 sec
test 52
        Start  52: smiTest2

52: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/smiTest2
52: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse
52: Test timeout computed to be: 1500
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'CO' for input: 'CO'
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'C-O' for input: 'C-O'
52: [10:13:43] SMILES Parse Error: syntax error while parsing: -
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES '-' for input: '-'
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES '[Bg]' for input: '[Bg]'
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'C' for input: 'C'
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES 'C-O' for input: 'C-O'
52: [10:13:43] SMILES Parse Error: Failed parsing SMILES '*' for input: '*'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS 'CO' for input: 'CO'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS 'C-O' for input: 'C-O'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS '-' for input: '-'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS '[Bg]' for input: '[Bg]'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS 'C' for input: 'C'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS '-O' for input: '-O'
52: [10:13:43] SMARTS Parse Error: Failed parsing SMARTS '*' for input: '*'
 49/213 Test  #52: smiTest2 ...............................   Passed    0.11 sec
test 53
        Start  53: cxsmilesTest

53: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/cxsmilesTest
53: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse
53: Test timeout computed to be: 1500
53: ===============================================================================
53: All tests passed (245 assertions in 18 test cases)
53: 
 50/213 Test  #53: cxsmilesTest ...........................   Passed    0.29 sec
test 54
        Start  54: smaTest1

54: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/smaTest1
54: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse
54: Test timeout computed to be: 1500
54: [10:13:45] SMARTS Parse Error: syntax error while parsing: [C:10H3]CC
54: [10:13:45] SMARTS Parse Error: Failed parsing SMARTS '[C:10H3]CC' for input: '[C:10H3]CC'
54: [10:13:45] SMARTS Parse Error: syntax error while parsing: [C:10:3]ON
54: [10:13:45] SMARTS Parse Error: Failed parsing SMARTS '[C:10:3]ON' for input: '[C:10:3]ON'
54: [10:13:45] WARNING: merging explicit H queries involved in ORs is not supported. This query will not be merged
54: [10:13:45] WARNING: merging explicit H queries involved in ORs is not supported. This query will not be merged
 51/213 Test  #54: smaTest1 ...............................   Passed    1.44 sec
test 55
        Start  55: smiTestCatch

55: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/smiTestCatch
55: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse
55: Test timeout computed to be: 1500
55: [10:13:45] SMILES Parse Error: unclosed ring for input: 'c1ccccc'
55: [10:13:45] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
55: [10:13:45] SMARTS Parse Error: unclosed ring for input: 'c1ccccc'
55: [10:13:45] SMARTS Parse Error: unclosed ring for input: 'C1C'
55: [10:13:45] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
55: [10:13:45] SMARTS Parse Error: syntax error while parsing: C)foo
55: [10:13:45] SMARTS Parse Error: Failed parsing SMARTS 'C)foo' for input: 'C)foo'
55: [10:13:45] SMARTS Parse Error: syntax error while parsing: CCC |$foo;;bar$|
55: [10:13:45] SMARTS Parse Error: Failed parsing SMARTS 'CCC |$foo;;bar$|' for input: 'CCC |$foo;;bar$|'
55: [10:13:45] unrecognized CXSMILES CONNECT value: 'EU'. Assuming 'eu'
55: [10:13:46] w block attempts to set wedging on bond 0 more than once.
55: [10:13:46] improperly formatted w block
55: [10:13:46] atom 3 is not associated with bond 1 in w block
55: ===============================================================================
55: All tests passed (992 assertions in 51 test cases)
55: 
 52/213 Test  #55: smiTestCatch ...........................   Passed    1.07 sec
test 56
        Start  56: nontetrahedralCatch

56: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/nontetrahedralCatch
56: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse
56: Test timeout computed to be: 1500
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] WARNING: not removing hydrogen atom with neighbor that has non-tetrahedral stereochemistry
56: [10:13:46] ignoring non-tetrahedral stereo specification since setAllowNontetrahedralChirality() is false.
56: ===============================================================================
56: All tests passed (308 assertions in 9 test cases)
56: 
 53/213 Test  #56: nontetrahedralCatch ....................   Passed    0.50 sec
test 57
        Start  57: testDepictor

57: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/testDepictor
57: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor
57: Test timeout computed to be: 1500
5: [10:13:48] Finished: testMultipleTimes() 
5: [10:13:48] 
5: -----------------------------------------
 54/213 Test   #5: testConcurrentQueue ....................   Passed  106.70 sec
test 58
        Start  58: depictorCatch

58: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/depictorCatch
58: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor
58: Test timeout computed to be: 1500
58: ===============================================================================
58: All tests passed (81 assertions in 7 test cases)
58: 
 55/213 Test  #58: depictorCatch ..........................   Passed    0.63 sec
test 59
        Start  59: pyDepictor

59: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/testDepictor.py"
59: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap
59: Test timeout computed to be: 1500
57: [10:13:49] Warning: stereochemistry around double bond may be incorrect in depiction.
 56/213 Test  #57: testDepictor ...........................   Passed    3.24 sec
test 60
        Start  60: fileParsersTest1

60: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/fileParsersTest1
60: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
60: Test timeout computed to be: 1500
60: ***************************************
60: ***************************************
60: [10:13:50] bond with order 0 found on line 7. This is not part of the MDL specification.
60: [10:13:50] unrecognized query bond type, 9, found on line 7. Using an "any" query.
60: [10:13:50] Skipping unrecognized collection type at line 26: MDLV30/HILITE BONDS=(1 7)
60: [10:13:50] Skipping unrecognized collection type at line 27: MDLV30/HILITE ATOMS=(1 7)
60: [10:13:50] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:13:50] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:13:50] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:13:50] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:13:50] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:13:50] Warning: molecule is tagged as 3D, but all Z coords are zero
60: generating smiles
60: smiles: c12n(C3OC(COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4CO)(=O)S)(=O)S)(=O)S)(S)=O)(S)=O)(=O)S)(=O)S)(S)=O)(=O)S)(S)=O)C(OP(S)(=O)OCC(COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4CO)(=O)S)(=O)S)(=O)S)(S)=O)(S)=O)(=O)S)(=O)S)(S)=O)(=O)S)(S)=O)(S)=O)O)C3O)ccc1c(=O)[nH]c(N)n2
60: converting back
60: check isomorphism
59: ...........[10:13:54] SMILES Parse Error: syntax error while parsing: invalidsmiles
59: [10:13:54] SMILES Parse Error: Failed parsing SMILES 'invalidsmiles' for input: 'invalidsmiles'
59: .....
59: ----------------------------------------------------------------------
59: Ran 16 tests in 4.031s
59: 
59: OK
 57/213 Test  #59: pyDepictor .............................   Passed    6.45 sec
test 61
        Start  61: testMolSupplier

61: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testMolSupplier
61: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
61: Test timeout computed to be: 1500
61: [10:13:56] 
61: -----------------------------------------
61: [10:13:56] 
61: 
61: ****
61: Invariant Violation
61: bad prop value
61: Violation occurred on line 158 in file ./Code/GraphMol/FileParsers/MaeMolSupplier.cpp
61: Failed Expression: nSwaps < 2
61: ****
61: 
61: [10:13:57] Finished: testMolSup()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] Finished: testRandMolSup()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] Finished: testSmilesSup()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] ------------------------------------------------------
61: [10:13:57] SMILES Parse Error: syntax error while parsing: fail
61: [10:13:57] SMILES Parse Error: Failed parsing SMILES 'fail' for input: 'fail'
61: [10:13:57] ERROR: Smiles parse error on line 3
61: [10:13:57] ERROR: Cannot create molecule from : 'fail'
61: [10:13:57] ------------------------------------------------------
61: [10:13:57] ------------------------------------------------------
61: [10:13:57] >>> This may result in an infinite loop.  It should finish almost immediately:
61: [10:13:57] <<< done.
61: [10:13:57] Finished: testSmilesSupFromText()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] Finished: testSmilesWriter()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] Finished: testSDWriter()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] Finished: testSDSupplierEnding()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:57] Finished: testSuppliersEmptyFile()
61: [10:13:57] -----------------------------------------
61: 
61: [10:13:57] -----------------------------------------
61: [10:13:58] Finished: testCisTrans()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testStereoRound()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testIssue226()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testTDTSupplier1()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testTDTSupplier2()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testTDTSupplier3()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testSDSupplierFromText()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] ERROR: Problems encountered parsing data fields
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] ERROR: Problems encountered parsing data fields
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Spurious data before the first property will be ignored
61: [10:13:58] Property <ID> will be truncated after the first blank line
61: [10:13:58] Property <ID> will be truncated after the first blank line
61: [10:13:58] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
61: [10:13:58] Finished: testSDSupplierStrLax1()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] ERROR: Problems encountered parsing data fields
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
61: [10:13:58] Finished: testSDSupplierStrLax2()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] ERROR: Problems encountered parsing data fields
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] ERROR: Problems encountered parsing data fields
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Spurious data before the first property will be ignored
61: [10:13:58] Property <ID> will be truncated after the first blank line
61: [10:13:58] Property <ID> will be truncated after the first blank line
61: [10:13:58] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
61: [10:13:58] Finished: testSDSupplierFromTextStrLax1()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] ERROR: Problems encountered parsing data fields
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
61: [10:13:58] Finished: testSDSupplierFromTextStrLax2()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testIssue265()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] ERROR: End of data field name not found
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Explicit valence for atom # 0 F, 2, is greater than permitted
61: [10:13:58] ERROR: Could not sanitize molecule ending on line 16
61: [10:13:58] ERROR: Explicit valence for atom # 0 F, 2, is greater than permitted
61: [10:13:58] ERROR: Atom line too short: '  1  2  1  0  0  0  0' on line 12
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] ERROR: Bond line too short: 'M  END' on line 18
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Finished: testSDErrorHandling()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testIssue381()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testSetStreamIndices()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testMixIterAndRandom()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: build:
61: [10:13:58] Finished: testRemoveHs()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testGetItemText()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testForwardSDSupplier()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testMissingCRSDSupplier()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
60: [10:13:58] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:13:58] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:13:58] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:13:58] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
61: [10:13:58] Finished: testIssue3482695()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
60: [10:13:58]  deprecated group abbreviation ignored on line 24
61: [10:13:58] ERROR: Cannot convert 'foo' to unsigned int on line 557
61: [10:13:58] ERROR: moving to the beginning of the next molecule
60: smiles: [1*]c1c([2*])c([3*])c([4*])c(-c2c([9*])oc3c([8*])c([7*])c([6*])c([5*])c3c2=O)c1[10*]
60: [10:13:58] 
60: 
60: ****
60: Post-condition Violation
60: Element 'Mv' not found
60: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
60: Failed Expression: anum > -1
60: ****
60: 
61: [10:13:58] Finished: testIssue3525673()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testBlankLinesInProps()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testSkipLines()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testGitHub23()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testGitHub88()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testGitHub2285()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] SMILES Parse Error: unclosed ring for input: 'c1ccccc'
61: [10:13:58] ERROR: Smiles parse error on line 1
61: [10:13:58] ERROR: Cannot create molecule from : 'c1ccccc'
61: [10:13:58] SMILES Parse Error: extra open parentheses for input: 'C(C'
61: [10:13:58] ERROR: Smiles parse error on line 3
61: [10:13:58] ERROR: Cannot create molecule from : 'C(C'
61: [10:13:58] Explicit valence for atom # 1 C, 5, is greater than permitted
61: [10:13:58] ERROR: Could not sanitize molecule on line 5
61: [10:13:58] ERROR: Explicit valence for atom # 1 C, 5, is greater than permitted
61: [10:13:58] Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] ERROR: Could not sanitize molecule ending on line 21
61: [10:13:58] ERROR: Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] ERROR: Could not sanitize molecule ending on line 21
61: [10:13:58] ERROR: Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] ERROR: Could not sanitize molecule ending on line 21
61: [10:13:58] ERROR: Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] ERROR: Atom line too short: '   -9.6' on line 28
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] ERROR: Could not sanitize molecule ending on line 21
61: [10:13:58] ERROR: Explicit valence for atom # 1 F, 2, is greater than permitted
61: [10:13:58] ERROR: Atom line too short: '   -9.6' on line 28
61: [10:13:58] ERROR: moving to the beginning of the next molecule
61: [10:13:58] Finished: testGitHub2479()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] 
61: 
61: ****
61: Invariant Violation
61: bad chiral bond
61: Violation occurred on line 164 in file ./Code/GraphMol/FileParsers/MaeMolSupplier.cpp
61: Failed Expression: bnd
61: ****
61: 
61: [10:13:58] Finished: testGitHub2881()
61: [10:13:58] -----------------------------------------
61: 
61: [10:13:58] -----------------------------------------
61: [10:13:58] Finished: testGitHub3517()
61: [10:13:58] -----------------------------------------
61: 
 58/213 Test  #61: testMolSupplier ........................   Passed    2.72 sec
test 62
        Start  62: testGeneralFileReader

62: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testGeneralFileReader
62: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
62: Test timeout computed to be: 1500
62: [10:13:58] 
62: -----------------------------------------
62: [10:13:58] Finished: testDetermineFormat()
62: [10:13:58] -----------------------------------------
62: 
62: [10:13:58] 
62: -----------------------------------------
62: [10:13:59] Finished: testSdf()
62: [10:13:59] -----------------------------------------
62: 
62: [10:13:59] 
62: -----------------------------------------
62: [10:13:59] Finished: testSmi()
62: [10:13:59] -----------------------------------------
62: 
62: [10:13:59] 
62: -----------------------------------------
62: [10:13:59] Finished: testMae()
62: [10:13:59] -----------------------------------------
62: 
62: [10:13:59] 
62: -----------------------------------------
62: [10:13:59] Finished: testTdt()
62: [10:13:59] -----------------------------------------
62: 
 59/213 Test  #62: testGeneralFileReader ..................   Passed    1.04 sec
test 63
        Start  63: testMultithreadedMolSupplier

63: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testMultithreadedMolSupplier
63: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
63: Test timeout computed to be: 1500
63: [10:13:59] 
63: -----------------------------------------
25: Checking against /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_reference.log...
25: All 191 tests passed
25: 
25: Computing MMFF94 energies for /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_hypervalent.smi...
60: [10:14:23] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:14:23] Warning: molecule is tagged as 3D, but all Z coords are zero
60: ----------------------------------
60: ----------------------------------
60: [10:14:24] 
60: 
60: ****
60: Pre-condition Violation
60: rlabel out of range for MDL files
60: Violation occurred on line 799 in file ./Code/GraphMol/Atom.cpp
60: Failed Expression: rlabel >= 0 && rlabel < 100
60: ****
60: 
60: [10:14:24] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
60: [10:14:28] SMARTS Parse Error: syntax error while parsing: MyDogHasFleas
60: [10:14:28] SMARTS Parse Error: Failed parsing SMARTS 'MyDogHasFleas' for input: 'MyDogHasFleas'
60: [10:14:28] Empty atom list: 'M  ALS   1  0 F' on line 8.
60: C
60: [10:14:28] -------------------------------------
60: [10:14:28]     Test multithreading Locale Switching
60: [10:14:28]     Test multithreading (Done)
60: [10:14:28] -------------------------------------
60: ***************************************
60: ***************************************
60: [10:14:28] bond with order 0 found on line 7. This is not part of the MDL specification.
60: [10:14:28] unrecognized query bond type, 9, found on line 7. Using an "any" query.
60: [10:14:29] Skipping unrecognized collection type at line 26: MDLV30/HILITE BONDS=(1 7)
60: [10:14:29] Skipping unrecognized collection type at line 27: MDLV30/HILITE ATOMS=(1 7)
60: [10:14:29] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:14:29] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:14:29] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:14:29] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:14:29] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:14:29] Warning: molecule is tagged as 3D, but all Z coords are zero
60: generating smiles
60: smiles: c12n(C3OC(COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4CO)(=O)S)(=O)S)(=O)S)(S)=O)(S)=O)(=O)S)(=O)S)(S)=O)(=O)S)(S)=O)C(OP(S)(=O)OCC(COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(cc5)c(=O)[nH]c(N)n6)OC4COP(OC4C(O)C(n5c(=O)[nH]c(=O)cc5)OC4COP(OC4C(O)C(n5c(=O)nc(N)cc5)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4COP(OC4C(O)C(n5c6c(nc5)c(N)ncn6)OC4CO)(=O)S)(=O)S)(=O)S)(S)=O)(S)=O)(=O)S)(=O)S)(S)=O)(=O)S)(S)=O)(S)=O)O)C3O)ccc1c(=O)[nH]c(N)n2
60: converting back
60: check isomorphism
60: [10:14:39] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:14:39] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:14:39] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:14:39] Warning: conflicting stereochemistry at atom 1 ignored by rule 1a.
60: [10:14:39]  deprecated group abbreviation ignored on line 24
60: smiles: [1*]c1c([2*])c([3*])c([4*])c(-c2c([9*])oc3c([8*])c([7*])c([6*])c([5*])c3c2=O)c1[10*]
60: [10:14:39] 
60: 
60: ****
60: Post-condition Violation
60: Element 'Mv' not found
60: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
60: Failed Expression: anum > -1
60: ****
60: 
63: [10:14:51] Finished: testSmiCorrectness()
63: [10:14:51] -----------------------------------------
63: 
63: [10:14:51] 
63: -----------------------------------------
63: [10:14:51] Spurious data before the first property will be ignored
63: [10:14:51] Property <ID> will be truncated after the first blank line
63: [10:14:51] Property <ID> will be truncated after the first blank line
63: [10:14:51] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
63: [10:14:54] Finished: testSDCorrectness()
63: [10:14:54] -----------------------------------------
63: 
 60/213 Test  #63: testMultithreadedMolSupplier ...........   Passed   54.36 sec
test 64
        Start  64: testMolWriter

64: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testMolWriter
64: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
64: Test timeout computed to be: 1500
64: [10:14:56] Warning: molecule is tagged as 3D, but all Z coords are zero
64: [10:14:56] Warning: molecule is tagged as 3D, but all Z coords are zero
64: [10:14:56] Warning: molecule is tagged as 3D, but all Z coords are zero
64: [10:14:56] bond with order 0 found on line 11. This is not part of the MDL specification.
64: [10:14:56] bond with order 0 found on line 16. This is not part of the MDL specification.
 61/213 Test  #64: testMolWriter ..........................   Passed    2.37 sec
test 65
        Start  65: testTplParser

65: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testTplParser
65: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
65: Test timeout computed to be: 1500
 62/213 Test  #65: testTplParser ..........................   Passed    0.24 sec
test 66
        Start  66: testMol2ToMol

66: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testMol2ToMol
66: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
66: Test timeout computed to be: 1500
 63/213 Test  #66: testMol2ToMol ..........................   Passed    0.34 sec
test 67
        Start  67: testSequence

67: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testSequence
67: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
67: Test timeout computed to be: 1500
67:   Sequence: GREG
67:   HELM: PEPTIDE1{G.R.E.G}$$$$
67:   Smiles: N=C(N)NCCC[C@H](NC(=O)CN)C(=O)N[C@@H](CCC(=O)O)C(=O)NCC(=O)O
67:   PDB:
67: ATOM      1  N   GLY A   1       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      2  CA  GLY A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      3  C   GLY A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      4  O   GLY A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      5  N   ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      6  CA  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      7  C   ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      8  O   ARG A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      9  CB  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     10  CG  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     11  CD  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     12  NE  ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     13  CZ  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     14  NH1 ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     15  NH2 ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     16  N   GLU A   3       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     17  CA  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     18  C   GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     19  O   GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     20  CB  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     21  CG  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     22  CD  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     23  OE1 GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     24  OE2 GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     25  N   GLY A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     26  CA  GLY A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     27  C   GLY A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     28  O   GLY A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     29  OXT GLY A   4       0.000   0.000   0.000  1.00  0.00           O  
67: CONECT    1    2
67: CONECT    2    3
67: CONECT    3    4    4    5
67: CONECT    5    6
67: CONECT    6    7    9
67: CONECT    7    8    8   16
67: CONECT    9   10
67: CONECT   10   11
67: CONECT   11   12
67: CONECT   12   13
67: CONECT   13   14   14   15
67: CONECT   16   17
67: CONECT   17   18   20
67: CONECT   18   19   19   25
67: CONECT   20   21
67: CONECT   21   22
67: CONECT   22   23   23   24
67: CONECT   25   26
67: CONECT   26   27
67: CONECT   27   28   28   29
67: END
67: 
67:   Sequence: TTCCPSIVARSNFNVCRLPGTPEAICATYTGCIIIPGATCPGDYAN
67:   HELM: PEPTIDE1{T.T.C.C.P.S.I.V.A.R.S.N.F.N.V.C.R.L.P.G.T.P.E.A.I.C.A.T.Y.T.G.C.I.I.I.P.G.A.T.C.P.G.D.Y.A.N}$$$$
67:   Smiles: CC[C@H](C)[C@H](NC(=O)[C@H](C)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)CNC(=O)[C@@H]1CCCN1C(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CS)NC(=O)[C@@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CO)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@@H]1CCCN1C(=O)[C@H](CS)NC(=O)[C@H](CS)NC(=O)[C@@H](NC(=O)[C@@H](N)[C@@H](C)O)[C@@H](C)O)[C@@H](C)CC)C(C)C)C(C)C)[C@@H](C)O)C(=O)N[C@@H](CS)C(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@H](C(=O)NCC(=O)N[C@@H](CS)C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)NCC(=O)N[C@@H](C)C(=O)N[C@H](C(=O)N[C@@H](CS)C(=O)N1CCC[C@H]1C(=O)NCC(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(N)=O)C(=O)O)[C@@H](C)O)[C@@H](C)CC)[C@@H](C)CC)[C@@H](C)CC)[C@@H](C)O)[C@@H](C)O
67:   PDB:
67: ATOM      1  N   THR A   1       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      2  CA  THR A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      3  C   THR A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      4  O   THR A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      5  CB  THR A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      6  OG1 THR A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      7  CG2 THR A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      8  N   THR A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      9  CA  THR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     10  C   THR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     11  O   THR A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     12  CB  THR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     13  OG1 THR A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     14  CG2 THR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     15  N   CYS A   3       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     16  CA  CYS A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     17  C   CYS A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     18  O   CYS A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     19  CB  CYS A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     20  SG  CYS A   3       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM     21  N   CYS A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     22  CA  CYS A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     23  C   CYS A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     24  O   CYS A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     25  CB  CYS A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     26  SG  CYS A   4       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM     27  N   PRO A   5       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     28  CA  PRO A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     29  C   PRO A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     30  O   PRO A   5       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     31  CB  PRO A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     32  CG  PRO A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     33  CD  PRO A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     34  N   SER A   6       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     35  CA  SER A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     36  C   SER A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     37  O   SER A   6       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     38  CB  SER A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     39  OG  SER A   6       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     40  N   ILE A   7       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     41  CA  ILE A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     42  C   ILE A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     43  O   ILE A   7       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     44  CB  ILE A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     45  CG1 ILE A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     46  CG2 ILE A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     47  CD1 ILE A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     48  N   VAL A   8       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     49  CA  VAL A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     50  C   VAL A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     51  O   VAL A   8       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     52  CB  VAL A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     53  CG1 VAL A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     54  CG2 VAL A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     55  N   ALA A   9       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     56  CA  ALA A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     57  C   ALA A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     58  O   ALA A   9       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     59  CB  ALA A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     60  N   ARG A  10       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     61  CA  ARG A  10       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     62  C   ARG A  10       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     63  O   ARG A  10       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     64  CB  ARG A  10       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     65  CG  ARG A  10       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     66  CD  ARG A  10       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     67  NE  ARG A  10       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     68  CZ  ARG A  10       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     69  NH1 ARG A  10       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     70  NH2 ARG A  10       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     71  N   SER A  11       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     72  CA  SER A  11       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     73  C   SER A  11       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     74  O   SER A  11       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     75  CB  SER A  11       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     76  OG  SER A  11       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     77  N   ASN A  12       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     78  CA  ASN A  12       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     79  C   ASN A  12       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     80  O   ASN A  12       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     81  CB  ASN A  12       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     82  CG  ASN A  12       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     83  OD1 ASN A  12       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     84  ND2 ASN A  12       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     85  N   PHE A  13       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     86  CA  PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     87  C   PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     88  O   PHE A  13       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     89  CB  PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     90  CG  PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     91  CD1 PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     92  CD2 PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     93  CE1 PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     94  CE2 PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     95  CZ  PHE A  13       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     96  N   ASN A  14       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     97  CA  ASN A  14       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     98  C   ASN A  14       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     99  O   ASN A  14       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    100  CB  ASN A  14       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    101  CG  ASN A  14       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    102  OD1 ASN A  14       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    103  ND2 ASN A  14       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    104  N   VAL A  15       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    105  CA  VAL A  15       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    106  C   VAL A  15       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    107  O   VAL A  15       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    108  CB  VAL A  15       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    109  CG1 VAL A  15       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    110  CG2 VAL A  15       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    111  N   CYS A  16       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    112  CA  CYS A  16       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    113  C   CYS A  16       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    114  O   CYS A  16       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    115  CB  CYS A  16       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    116  SG  CYS A  16       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM    117  N   ARG A  17       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    118  CA  ARG A  17       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    119  C   ARG A  17       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    120  O   ARG A  17       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    121  CB  ARG A  17       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    122  CG  ARG A  17       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    123  CD  ARG A  17       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    124  NE  ARG A  17       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    125  CZ  ARG A  17       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    126  NH1 ARG A  17       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    127  NH2 ARG A  17       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    128  N   LEU A  18       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    129  CA  LEU A  18       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    130  C   LEU A  18       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    131  O   LEU A  18       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    132  CB  LEU A  18       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    133  CG  LEU A  18       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    134  CD1 LEU A  18       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    135  CD2 LEU A  18       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    136  N   PRO A  19       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    137  CA  PRO A  19       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    138  C   PRO A  19       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    139  O   PRO A  19       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    140  CB  PRO A  19       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    141  CG  PRO A  19       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    142  CD  PRO A  19       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    143  N   GLY A  20       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    144  CA  GLY A  20       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    145  C   GLY A  20       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    146  O   GLY A  20       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    147  N   THR A  21       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    148  CA  THR A  21       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    149  C   THR A  21       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    150  O   THR A  21       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    151  CB  THR A  21       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    152  OG1 THR A  21       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    153  CG2 THR A  21       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    154  N   PRO A  22       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    155  CA  PRO A  22       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    156  C   PRO A  22       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    157  O   PRO A  22       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    158  CB  PRO A  22       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    159  CG  PRO A  22       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    160  CD  PRO A  22       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    161  N   GLU A  23       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    162  CA  GLU A  23       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    163  C   GLU A  23       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    164  O   GLU A  23       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    165  CB  GLU A  23       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    166  CG  GLU A  23       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    167  CD  GLU A  23       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    168  OE1 GLU A  23       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    169  OE2 GLU A  23       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    170  N   ALA A  24       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    171  CA  ALA A  24       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    172  C   ALA A  24       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    173  O   ALA A  24       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    174  CB  ALA A  24       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    175  N   ILE A  25       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    176  CA  ILE A  25       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    177  C   ILE A  25       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    178  O   ILE A  25       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    179  CB  ILE A  25       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    180  CG1 ILE A  25       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    181  CG2 ILE A  25       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    182  CD1 ILE A  25       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    183  N   CYS A  26       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    184  CA  CYS A  26       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    185  C   CYS A  26       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    186  O   CYS A  26       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    187  CB  CYS A  26       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    188  SG  CYS A  26       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM    189  N   ALA A  27       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    190  CA  ALA A  27       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    191  C   ALA A  27       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    192  O   ALA A  27       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    193  CB  ALA A  27       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    194  N   THR A  28       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    195  CA  THR A  28       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    196  C   THR A  28       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    197  O   THR A  28       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    198  CB  THR A  28       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    199  OG1 THR A  28       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    200  CG2 THR A  28       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    201  N   TYR A  29       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    202  CA  TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    203  C   TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    204  O   TYR A  29       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    205  CB  TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    206  CG  TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    207  CD1 TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    208  CD2 TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    209  CE1 TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    210  CE2 TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    211  CZ  TYR A  29       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    212  OH  TYR A  29       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    213  N   THR A  30       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    214  CA  THR A  30       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    215  C   THR A  30       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    216  O   THR A  30       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    217  CB  THR A  30       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    218  OG1 THR A  30       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    219  CG2 THR A  30       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    220  N   GLY A  31       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    221  CA  GLY A  31       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    222  C   GLY A  31       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    223  O   GLY A  31       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    224  N   CYS A  32       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    225  CA  CYS A  32       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    226  C   CYS A  32       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    227  O   CYS A  32       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    228  CB  CYS A  32       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    229  SG  CYS A  32       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM    230  N   ILE A  33       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    231  CA  ILE A  33       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    232  C   ILE A  33       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    233  O   ILE A  33       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    234  CB  ILE A  33       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    235  CG1 ILE A  33       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    236  CG2 ILE A  33       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    237  CD1 ILE A  33       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    238  N   ILE A  34       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    239  CA  ILE A  34       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    240  C   ILE A  34       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    241  O   ILE A  34       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    242  CB  ILE A  34       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    243  CG1 ILE A  34       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    244  CG2 ILE A  34       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    245  CD1 ILE A  34       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    246  N   ILE A  35       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    247  CA  ILE A  35       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    248  C   ILE A  35       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    249  O   ILE A  35       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    250  CB  ILE A  35       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    251  CG1 ILE A  35       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    252  CG2 ILE A  35       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    253  CD1 ILE A  35       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    254  N   PRO A  36       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    255  CA  PRO A  36       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    256  C   PRO A  36       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    257  O   PRO A  36       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    258  CB  PRO A  36       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    259  CG  PRO A  36       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    260  CD  PRO A  36       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    261  N   GLY A  37       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    262  CA  GLY A  37       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    263  C   GLY A  37       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    264  O   GLY A  37       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    265  N   ALA A  38       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    266  CA  ALA A  38       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    267  C   ALA A  38       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    268  O   ALA A  38       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    269  CB  ALA A  38       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    270  N   THR A  39       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    271  CA  THR A  39       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    272  C   THR A  39       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    273  O   THR A  39       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    274  CB  THR A  39       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    275  OG1 THR A  39       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    276  CG2 THR A  39       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    277  N   CYS A  40       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    278  CA  CYS A  40       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    279  C   CYS A  40       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    280  O   CYS A  40       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    281  CB  CYS A  40       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    282  SG  CYS A  40       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM    283  N   PRO A  41       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    284  CA  PRO A  41       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    285  C   PRO A  41       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    286  O   PRO A  41       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    287  CB  PRO A  41       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    288  CG  PRO A  41       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    289  CD  PRO A  41       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    290  N   GLY A  42       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    291  CA  GLY A  42       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    292  C   GLY A  42       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    293  O   GLY A  42       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    294  N   ASP A  43       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    295  CA  ASP A  43       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    296  C   ASP A  43       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    297  O   ASP A  43       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    298  CB  ASP A  43       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    299  CG  ASP A  43       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    300  OD1 ASP A  43       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    301  OD2 ASP A  43       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    302  N   TYR A  44       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    303  CA  TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    304  C   TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    305  O   TYR A  44       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    306  CB  TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    307  CG  TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    308  CD1 TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    309  CD2 TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    310  CE1 TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    311  CE2 TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    312  CZ  TYR A  44       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    313  OH  TYR A  44       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    314  N   ALA A  45       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    315  CA  ALA A  45       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    316  C   ALA A  45       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    317  O   ALA A  45       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    318  CB  ALA A  45       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    319  N   ASN A  46       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    320  CA  ASN A  46       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    321  C   ASN A  46       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    322  O   ASN A  46       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    323  CB  ASN A  46       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    324  CG  ASN A  46       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM    325  OD1 ASN A  46       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM    326  ND2 ASN A  46       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM    327  OXT ASN A  46       0.000   0.000   0.000  1.00  0.00           O  
67: CONECT    1    2
67: CONECT    2    3    5
67: CONECT    3    4    4    8
67: CONECT    5    6    7
67: CONECT    8    9
67: CONECT    9   10   12
67: CONECT   10   11   11   15
67: CONECT   12   13   14
67: CONECT   15   16
67: CONECT   16   17   19
67: CONECT   17   18   18   21
67: CONECT   19   20
67: CONECT   21   22
67: CONECT   22   23   25
67: CONECT   23   24   24   27
67: CONECT   25   26
67: CONECT   27   28   33
67: CONECT   28   29   31
67: CONECT   29   30   30   34
67: CONECT   31   32
67: CONECT   32   33
67: CONECT   34   35
67: CONECT   35   36   38
67: CONECT   36   37   37   40
67: CONECT   38   39
67: CONECT   40   41
67: CONECT   41   42   44
67: CONECT   42   43   43   48
67: CONECT   44   45   46
67: CONECT   46   47
67: CONECT   48   49
67: CONECT   49   50   52
67: CONECT   50   51   51   55
67: CONECT   52   53   54
67: CONECT   55   56
67: CONECT   56   57   59
67: CONECT   57   58   58   60
67: CONECT   60   61
67: CONECT   61   62   64
67: CONECT   62   63   63   71
67: CONECT   64   65
67: CONECT   65   66
67: CONECT   66   67
67: CONECT   67   68
67: CONECT   68   69   69   70
67: CONECT   71   72
67: CONECT   72   73   75
67: CONECT   73   74   74   77
67: CONECT   75   76
67: CONECT   77   78
67: CONECT   78   79   81
67: CONECT   79   80   80   85
67: CONECT   81   82
67: CONECT   82   83   83   84
67: CONECT   85   86
67: CONECT   86   87   89
67: CONECT   87   88   88   96
67: CONECT   89   90
67: CONECT   90   91   91   92
67: CONECT   91   93
67: CONECT   92   94   94
67: CONECT   93   95   95
67: CONECT   94   95
67: CONECT   96   97
67: CONECT   97   98  100
67: CONECT   98   99   99  104
67: CONECT  100  101
67: CONECT  101  102  102  103
67: CONECT  104  105
67: CONECT  105  106  108
67: CONECT  106  107  107  111
67: CONECT  108  109  110
67: CONECT  111  112
67: CONECT  112  113  115
67: CONECT  113  114  114  117
67: CONECT  115  116
67: CONECT  117  118
67: CONECT  118  119  121
67: CONECT  119  120  120  128
67: CONECT  121  122
67: CONECT  122  123
67: CONECT  123  124
67: CONECT  124  125
67: CONECT  125  126  126  127
67: CONECT  128  129
67: CONECT  129  130  132
67: CONECT  130  131  131  136
67: CONECT  132  133
67: CONECT  133  134  135
67: CONECT  136  137  142
67: CONECT  137  138  140
67: CONECT  138  139  139  143
67: CONECT  140  141
67: CONECT  141  142
67: CONECT  143  144
67: CONECT  144  145
67: CONECT  145  146  146  147
67: CONECT  147  148
67: CONECT  148  149  151
67: CONECT  149  150  150  154
67: CONECT  151  152  153
67: CONECT  154  155  160
67: CONECT  155  156  158
67: CONECT  156  157  157  161
67: CONECT  158  159
67: CONECT  159  160
67: CONECT  161  162
67: CONECT  162  163  165
67: CONECT  163  164  164  170
67: CONECT  165  166
67: CONECT  166  167
67: CONECT  167  168  168  169
67: CONECT  170  171
67: CONECT  171  172  174
67: CONECT  172  173  173  175
67: CONECT  175  176
67: CONECT  176  177  179
67: CONECT  177  178  178  183
67: CONECT  179  180  181
67: CONECT  181  182
67: CONECT  183  184
67: CONECT  184  185  187
67: CONECT  185  186  186  189
67: CONECT  187  188
67: CONECT  189  190
67: CONECT  190  191  193
67: CONECT  191  192  192  194
67: CONECT  194  195
67: CONECT  195  196  198
67: CONECT  196  197  197  201
67: CONECT  198  199  200
67: CONECT  201  202
67: CONECT  202  203  205
67: CONECT  203  204  204  213
67: CONECT  205  206
67: CONECT  206  207  207  208
67: CONECT  207  209
67: CONECT  208  210  210
67: CONECT  209  211  211
67: CONECT  210  211
67: CONECT  211  212
67: CONECT  213  214
67: CONECT  214  215  217
67: CONECT  215  216  216  220
67: CONECT  217  218  219
67: CONECT  220  221
67: CONECT  221  222
67: CONECT  222  223  223  224
67: CONECT  224  225
67: CONECT  225  226  228
67: CONECT  226  227  227  230
67: CONECT  228  229
67: CONECT  230  231
67: CONECT  231  232  234
67: CONECT  232  233  233  238
67: CONECT  234  235  236
67: CONECT  236  237
67: CONECT  238  239
67: CONECT  239  240  242
67: CONECT  240  241  241  246
67: CONECT  242  243  244
67: CONECT  244  245
67: CONECT  246  247
67: CONECT  247  248  250
67: CONECT  248  249  249  254
67: CONECT  250  251  252
67: CONECT  252  253
67: CONECT  254  255  260
67: CONECT  255  256  258
67: CONECT  256  257  257  261
67: CONECT  258  259
67: CONECT  259  260
67: CONECT  261  262
67: CONECT  262  263
67: CONECT  263  264  264  265
67: CONECT  265  266
67: CONECT  266  267  269
67: CONECT  267  268  268  270
67: CONECT  270  271
67: CONECT  271  272  274
67: CONECT  272  273  273  277
67: CONECT  274  275  276
67: CONECT  277  278
67: CONECT  278  279  281
67: CONECT  279  280  280  283
67: CONECT  281  282
67: CONECT  283  284  289
67: CONECT  284  285  287
67: CONECT  285  286  286  290
67: CONECT  287  288
67: CONECT  288  289
67: CONECT  290  291
67: CONECT  291  292
67: CONECT  292  293  293  294
67: CONECT  294  295
67: CONECT  295  296  298
67: CONECT  296  297  297  302
67: CONECT  298  299
67: CONECT  299  300  300  301
67: CONECT  302  303
67: CONECT  303  304  306
67: CONECT  304  305  305  314
67: CONECT  306  307
67: CONECT  307  308  308  309
67: CONECT  308  310
67: CONECT  309  311  311
67: CONECT  310  312  312
67: CONECT  311  312
67: CONECT  312  313
67: CONECT  314  315
67: CONECT  315  316  318
67: CONECT  316  317  317  319
67: CONECT  319  320
67: CONECT  320  321  323
67: CONECT  321  322  322  327
67: CONECT  323  324
67: CONECT  324  325  325  326
67: END
67: 
67:   Sequence: GREG
67:   HELM: PEPTIDE1{G.R.E.G}$$$$
67:   Smiles: N=C(N)NCCC[C@H](NC(=O)CN)C(=O)N[C@@H](CCC(=O)O)C(=O)NCC(=O)O
67:   PDB:
67: ATOM      1  N   GLY A   1       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      2  CA  GLY A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      3  C   GLY A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      4  O   GLY A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      5  N   ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      6  CA  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      7  C   ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      8  O   ARG A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      9  CB  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     10  CG  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     11  CD  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     12  NE  ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     13  CZ  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     14  NH1 ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     15  NH2 ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     16  N   GLU A   3       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     17  CA  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     18  C   GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     19  O   GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     20  CB  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     21  CG  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     22  CD  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     23  OE1 GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     24  OE2 GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     25  N   GLY A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     26  CA  GLY A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     27  C   GLY A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     28  O   GLY A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     29  OXT GLY A   4       0.000   0.000   0.000  1.00  0.00           O  
67: CONECT    1    2
67: CONECT    2    3
67: CONECT    3    4    4    5
67: CONECT    5    6
67: CONECT    6    7    9
67: CONECT    7    8    8   16
67: CONECT    9   10
67: CONECT   10   11
67: CONECT   11   12
67: CONECT   12   13
67: CONECT   13   14   14   15
67: CONECT   16   17
67: CONECT   17   18   20
67: CONECT   18   19   19   25
67: CONECT   20   21
67: CONECT   21   22
67: CONECT   22   23   23   24
67: CONECT   25   26
67: CONECT   26   27
67: CONECT   27   28   28   29
67: END
67: 
67:   Sequence: CYIQNCPLG
67:   HELM: PEPTIDE1{C.Y.I.Q.N.C.P.L.G.[am]}$PEPTIDE1,PEPTIDE1,1:R3-6:R3$$$
67:   Smiles: CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccc(O)cc2)NC(=O)[C@@H](N)CSSC[C@@H](C(=O)N2CCC[C@H]2C(=O)N[C@@H](CC(C)C)C(=O)NCC(N)=O)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCC(N)=O)NC1=O
67:   PDB:
67: ATOM      1  N   CYS A   1       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      2  CA  CYS A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      3  C   CYS A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      4  O   CYS A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      5  CB  CYS A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      6  SG  CYS A   1       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM      7  N   TYR A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      8  CA  TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      9  C   TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     10  O   TYR A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     11  CB  TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     12  CG  TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     13  CD1 TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     14  CD2 TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     15  CE1 TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     16  CE2 TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     17  CZ  TYR A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     18  OH  TYR A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     19  N   ILE A   3       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     20  CA  ILE A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     21  C   ILE A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     22  O   ILE A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     23  CB  ILE A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     24  CG1 ILE A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     25  CG2 ILE A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     26  CD1 ILE A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     27  N   GLN A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     28  CA  GLN A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     29  C   GLN A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     30  O   GLN A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     31  CB  GLN A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     32  CG  GLN A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     33  CD  GLN A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     34  OE1 GLN A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     35  NE2 GLN A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     36  N   ASN A   5       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     37  CA  ASN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     38  C   ASN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     39  O   ASN A   5       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     40  CB  ASN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     41  CG  ASN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     42  OD1 ASN A   5       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     43  ND2 ASN A   5       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     44  N   CYS A   6       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     45  CA  CYS A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     46  C   CYS A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     47  O   CYS A   6       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     48  CB  CYS A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     49  SG  CYS A   6       0.000   0.000   0.000  1.00  0.00           S  
67: ATOM     50  N   PRO A   7       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     51  CA  PRO A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     52  C   PRO A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     53  O   PRO A   7       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     54  CB  PRO A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     55  CG  PRO A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     56  CD  PRO A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     57  N   LEU A   8       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     58  CA  LEU A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     59  C   LEU A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     60  O   LEU A   8       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     61  CB  LEU A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     62  CG  LEU A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     63  CD1 LEU A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     64  CD2 LEU A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     65  N   GLY A   9       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     66  CA  GLY A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     67  C   GLY A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     68  O   GLY A   9       0.000   0.000   0.000  1.00  0.00           O  
67: HETATM   69  N   NH2 A  10       0.000   0.000   0.000  1.00  0.00           N  
67: CONECT    1    2
67: CONECT    2    3    5
67: CONECT    3    4    4    7
67: CONECT    5    6
67: CONECT    6   49
67: CONECT    7    8
67: CONECT    8    9   11
67: CONECT    9   10   10   19
67: CONECT   11   12
67: CONECT   12   13   13   14
67: CONECT   13   15
67: CONECT   14   16   16
67: CONECT   15   17   17
67: CONECT   16   17
67: CONECT   17   18
67: CONECT   19   20
67: CONECT   20   21   23
67: CONECT   21   22   22   27
67: CONECT   23   24   25
67: CONECT   25   26
67: CONECT   27   28
67: CONECT   28   29   31
67: CONECT   29   30   30   36
67: CONECT   31   32
67: CONECT   32   33
67: CONECT   33   34   34   35
67: CONECT   36   37
67: CONECT   37   38   40
67: CONECT   38   39   39   44
67: CONECT   40   41
67: CONECT   41   42   42   43
67: CONECT   44   45
67: CONECT   45   46   48
67: CONECT   46   47   47   50
67: CONECT   48   49
67: CONECT   50   51   56
67: CONECT   51   52   54
67: CONECT   52   53   53   57
67: CONECT   54   55
67: CONECT   55   56
67: CONECT   57   58
67: CONECT   58   59   61
67: CONECT   59   60   60   65
67: CONECT   61   62
67: CONECT   62   63   64
67: CONECT   65   66
67: CONECT   66   67
67: CONECT   67   68   68   69
67: END
67: 
67:   Sequence: LfPVXLfPVX
67:   HELM: PEPTIDE1{L.[dF].P.V.[Orn].L.[dF].P.V.[Orn]}$PEPTIDE1,PEPTIDE1,10:R2-1:R1$$$
67:   Smiles: CC(C)C[C@@H]1NC(=O)[C@H](CCCN)NC(=O)[C@H](C(C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@@H](Cc2ccccc2)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCCN)NC(=O)[C@H](C(C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@@H](Cc2ccccc2)NC1=O
67:   PDB:
67: ATOM      1  N   LEU A   1       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      2  CA  LEU A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      3  C   LEU A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      4  O   LEU A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      5  CB  LEU A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      6  CG  LEU A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      7  CD1 LEU A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      8  CD2 LEU A   1       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM    9  N   DPN A   2       0.000   0.000   0.000  1.00  0.00           N  
67: HETATM   10  CA  DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   11  C   DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   12  O   DPN A   2       0.000   0.000   0.000  1.00  0.00           O  
67: HETATM   13  CB  DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   14  CG  DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   15  CD1 DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   16  CD2 DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   17  CE1 DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   18  CE2 DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   19  CZ  DPN A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     20  N   PRO A   3       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     21  CA  PRO A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     22  C   PRO A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     23  O   PRO A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     24  CB  PRO A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     25  CG  PRO A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     26  CD  PRO A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     27  N   VAL A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     28  CA  VAL A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     29  C   VAL A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     30  O   VAL A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     31  CB  VAL A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     32  CG1 VAL A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     33  CG2 VAL A   4       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   34  N   ORN A   5       0.000   0.000   0.000  1.00  0.00           N  
67: HETATM   35  CA  ORN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   36  C   ORN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   37  O   ORN A   5       0.000   0.000   0.000  1.00  0.00           O  
67: HETATM   38  CB  ORN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   39  CG  ORN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   40  CD  ORN A   5       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   41  NE  ORN A   5       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     42  N   LEU A   6       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     43  CA  LEU A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     44  C   LEU A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     45  O   LEU A   6       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     46  CB  LEU A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     47  CG  LEU A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     48  CD1 LEU A   6       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     49  CD2 LEU A   6       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   50  N   DPN A   7       0.000   0.000   0.000  1.00  0.00           N  
67: HETATM   51  CA  DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   52  C   DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   53  O   DPN A   7       0.000   0.000   0.000  1.00  0.00           O  
67: HETATM   54  CB  DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   55  CG  DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   56  CD1 DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   57  CD2 DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   58  CE1 DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   59  CE2 DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   60  CZ  DPN A   7       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     61  N   PRO A   8       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     62  CA  PRO A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     63  C   PRO A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     64  O   PRO A   8       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     65  CB  PRO A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     66  CG  PRO A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     67  CD  PRO A   8       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     68  N   VAL A   9       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     69  CA  VAL A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     70  C   VAL A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     71  O   VAL A   9       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     72  CB  VAL A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     73  CG1 VAL A   9       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     74  CG2 VAL A   9       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   75  N   ORN A  10       0.000   0.000   0.000  1.00  0.00           N  
67: HETATM   76  CA  ORN A  10       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   77  C   ORN A  10       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   78  O   ORN A  10       0.000   0.000   0.000  1.00  0.00           O  
67: HETATM   79  CB  ORN A  10       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   80  CG  ORN A  10       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   81  CD  ORN A  10       0.000   0.000   0.000  1.00  0.00           C  
67: HETATM   82  NE  ORN A  10       0.000   0.000   0.000  1.00  0.00           N  
67: CONECT    1    2   77
67: CONECT    2    3    5
67: CONECT    3    4    4    9
67: CONECT    5    6
67: CONECT    6    7    8
67: CONECT    9   10
67: CONECT   10   11   13
67: CONECT   11   12   12   20
67: CONECT   13   14
67: CONECT   14   15   15   16
67: CONECT   15   17
67: CONECT   16   18   18
67: CONECT   17   19   19
67: CONECT   18   19
67: CONECT   20   21   26
67: CONECT   21   22   24
67: CONECT   22   23   23   27
67: CONECT   24   25
67: CONECT   25   26
67: CONECT   27   28
67: CONECT   28   29   31
67: CONECT   29   30   30   34
67: CONECT   31   32   33
67: CONECT   34   35
67: CONECT   35   36   38
67: CONECT   36   37   37   42
67: CONECT   38   39
67: CONECT   39   40
67: CONECT   40   41
67: CONECT   42   43
67: CONECT   43   44   46
67: CONECT   44   45   45   50
67: CONECT   46   47
67: CONECT   47   48   49
67: CONECT   50   51
67: CONECT   51   52   54
67: CONECT   52   53   53   61
67: CONECT   54   55
67: CONECT   55   56   56   57
67: CONECT   56   58
67: CONECT   57   59   59
67: CONECT   58   60   60
67: CONECT   59   60
67: CONECT   61   62   67
67: CONECT   62   63   65
67: CONECT   63   64   64   68
67: CONECT   65   66
67: CONECT   66   67
67: CONECT   68   69
67: CONECT   69   70   72
67: CONECT   70   71   71   75
67: CONECT   72   73   74
67: CONECT   75   76
67: CONECT   76   77   79
67: CONECT   77   78   78
67: CONECT   79   80
67: CONECT   80   81
67: CONECT   81   82
67: END
67: 
67:   Sequence: GREG
67:   HELM: PEPTIDE1{G.R.E.G}$$$$
67:   Smiles: N=C(N)NCCCC(NC(=O)CN)C(=O)NC(CCC(=O)O)C(=O)NCC(=O)O
67:   PDB:
67: ATOM      1  N   GLY A   1       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      2  CA  GLY A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      3  C   GLY A   1       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      4  O   GLY A   1       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      5  N   ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM      6  CA  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      7  C   ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM      8  O   ARG A   2       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM      9  CB  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     10  CG  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     11  CD  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     12  NE  ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     13  CZ  ARG A   2       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     14  NH1 ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     15  NH2 ARG A   2       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     16  N   GLU A   3       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     17  CA  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     18  C   GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     19  O   GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     20  CB  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     21  CG  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     22  CD  GLU A   3       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     23  OD1 GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     24  OD2 GLU A   3       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     25  N   GLY A   4       0.000   0.000   0.000  1.00  0.00           N  
67: ATOM     26  CA  GLY A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     27  C   GLY A   4       0.000   0.000   0.000  1.00  0.00           C  
67: ATOM     28  O   GLY A   4       0.000   0.000   0.000  1.00  0.00           O  
67: ATOM     29  OXT GLY A   4       0.000   0.000   0.000  1.00  0.00           O  
67: CONECT    1    2
67: CONECT    2    3
67: CONECT    3    4    4    5
67: CONECT    5    6
67: CONECT    6    7    9
67: CONECT    7    8    8   16
67: CONECT    9   10
67: CONECT   10   11
67: CONECT   11   12
67: CONECT   12   13
67: CONECT   13   14   14   15
67: CONECT   16   17
67: CONECT   17   18   20
67: CONECT   18   19   19   25
67: CONECT   20   21
67: CONECT   21   22
67: CONECT   22   23   23   24
67: CONECT   25   26
67: CONECT   26   27
67: CONECT   27   28   28   29
67: END
67: 
 64/213 Test  #67: testSequence ...........................   Passed    0.36 sec
test 68
        Start  68: testExtendedStereoParsing

68: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testExtendedStereoParsing
68: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
68: Test timeout computed to be: 1500
 65/213 Test  #68: testExtendedStereoParsing ..............   Passed    0.39 sec
test 69
        Start  69: fileParsersCatchTest

69: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/fileParsersCatchTest
69: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
69: Test timeout computed to be: 1500
69: [10:14:58] SGroup SAP line too short: 'M  SAP   1  1   8' on line 29
69: [10:14:58] SGroup SAP line too short: 'M  SAP   1  1   8' on line 28
69: [10:14:58] Could not infer missing lvIdx on malformed SAP line for SGroup 1
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] SGroup SAP line too short: 'M  SAP   1  1   8' on line 28
69: [10:14:58] Could not infer missing lvIdx on malformed SAP line for SGroup 1
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] SGroup SAP line too short: 'M  SAP   1  1   8' on line 35
69: [10:14:58] SGroup SAP line too short: 'M  SAP   2  1  12' on line 39
69: [10:14:58] SGroup SAP line too short: 'M  SAP   1  1   8' on line 34
69: [10:14:58] SGroup SAP line too short: 'M  SAP   2  1  12' on line 38
69: [10:14:58] Could not infer missing lvIdx on malformed SAP line for SGroup 1
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] SGroup SAP line too short: 'M  SAP   1  1   8' on line 34
69: [10:14:58] SGroup SAP line too short: 'M  SAP   2  1  12' on line 39
69: [10:14:58] Could not infer missing lvIdx on malformed SAP line for SGroup 1
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] SGroup 3 referenced on line 40 not found.
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no bonds
69: Violation occurred on line 139 in file ./Code/GraphMol/SubstanceGroup.cpp
69: Failed Expression: !d_bonds.empty()
69: ****
69: 
69: [10:14:58] SGroup 3 referenced on line 40 not found.
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no bonds
69: Violation occurred on line 139 in file ./Code/GraphMol/SubstanceGroup.cpp
69: Failed Expression: !d_bonds.empty()
69: ****
69: 
69: [10:14:58] no bonds
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] SGroup line too short: 'M  SBV   1   6' on line 42
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] SGroup line too short: 'M  SBL   2  3   9  10' on line 46
69: [10:14:58] SGroup 2 is invalid and will be ignored
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple bonds with same bookmark
69: Violation occurred on line 269 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_bondBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple bonds with same bookmark
69: Violation occurred on line 269 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_bondBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] multiple bonds with same bookmark
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: bond is not part of the SubstanceGroup
69: Violation occurred on line 158 in file ./Code/GraphMol/SubstanceGroup.cpp
69: Failed Expression: std::find(d_bonds.begin(), d_bonds.end(), bondIdx) != d_bonds.end()
69: ****
69: 
69: [10:14:58] bond is not part of the SubstanceGroup
69: [10:14:58] SGroup 2 is invalid and will be ignored
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple atoms with same bookmark
69: Violation occurred on line 248 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_atomBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple atoms with same bookmark
69: Violation occurred on line 248 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_atomBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] multiple atoms with same bookmark
69: [10:14:58] Neither beginning nor ending atoms of bond 9 is in this SubstanceGroup.
69: [10:14:58] SGroup 2 is invalid and will be ignored
69: [10:14:58] WARNING: final character of V3000 array is not ')'
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple bonds with same bookmark
69: Violation occurred on line 269 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_bondBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] WARNING: final character of V3000 array is not ')'
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple bonds with same bookmark
69: Violation occurred on line 269 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_bondBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] multiple bonds with same bookmark
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] WARNING: final character of V3000 array is not ')'
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple atoms with same bookmark
69: Violation occurred on line 248 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_atomBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] WARNING: final character of V3000 array is not ')'
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple atoms with same bookmark
69: Violation occurred on line 248 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_atomBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] multiple atoms with same bookmark
69: [10:14:58] SGroup 1 is invalid and will be ignored
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple bonds with same bookmark
69: Violation occurred on line 269 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_bondBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple bonds with same bookmark
69: Violation occurred on line 269 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_bondBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] multiple bonds with same bookmark
69: [10:14:58] SGroup 2 is invalid and will be ignored
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple atoms with same bookmark
69: Violation occurred on line 248 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_atomBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: multiple atoms with same bookmark
69: Violation occurred on line 248 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: d_atomBookmarks.count(mark) == 1
69: ****
69: 
69: [10:14:58] multiple atoms with same bookmark
69: [10:14:58] SGroup 2 is invalid and will be ignored
69: [10:14:58] Explicit valence for atom # 2 O, 3, is greater than permitted
69: [10:14:58] Explicit valence for atom # 1 O, 3, is greater than permitted
69: [10:14:58] Explicit valence for atom # 1 C, 5, is greater than permitted
69: [10:14:58] sanitise [10:14:58] UNK: [10:14:58] Warning: molecule is tagged as 3D, but all Z coords are zero
69: [10:14:58] skipping block at line 7: 'BEGIN ATOM'
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no stream
69: Violation occurred on line 144 in file ./Code/GraphMol/FileParsers/SDMolSupplier.cpp
69: Failed Expression: dp_inStream
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no stream
69: Violation occurred on line 179 in file ./Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
69: Failed Expression: dp_inStream
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no stream
69: Violation occurred on line 429 in file ./Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
69: Failed Expression: dp_inStream
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no stream
69: Violation occurred on line 274 in file ./Code/GraphMol/FileParsers/TDTMolSupplier.cpp
69: Failed Expression: dp_inStream
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no stream
69: Violation occurred on line 502 in file ./Code/GraphMol/FileParsers/MaeMolSupplier.cpp
69: Failed Expression: dp_sInStream != nullptr
69: ****
69: 
69: [10:14:58] Found a SCD/SED line with missing/empty SDT specification at line 21
69: [10:14:58] Found a SCD/SED line with missing/empty SDT specification at line 20
69: [10:14:58] 
69: 
69: ****
69: Post-condition Violation
69: Element '' not found
69: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
69: Failed Expression: anum > -1
69: ****
69: 
69: [10:14:58] BEGIN SGROUP line not found on line 14
69: [10:14:58]  Unhandled CTAB feature: 'Unsupported SGroup type '' on line 18'. Molecule skipped.
69: [10:14:58] END SGROUP line not found on line 14
69: [10:14:58] END SGROUP line not found on line 14
69: [10:14:58] MRV_COORDINATE_BOND_TYPE SGroup with value 0 does not reference a query bond, ignoring.
69: [10:14:58] MRV_COORDINATE_BOND_TYPE SGroup with value 1 does not reference a query bond, ignoring.
69: [10:14:58] 
69: 
69: ****
69: Range Error
69: idx
69: Violation occurred on line 324 in file ./Code/GraphMol/ROMol.cpp
69: Failed Expression: 99 < 9
69: ****
69: 
69: [10:14:58] molecule does not contain a bond matching the MRV_COORDINATE_BOND_TYPE SGroup for bond 99, ignoring.
69: [10:14:58] Multiple ATTCHPT values for atom 2 on line 9
69: [10:14:58] Found a SCD/SED line with missing/empty SDT specification at line 12
69: [10:14:58] SMARTS Parse Error: syntax error while parsing: [#6;R
69: [10:14:58] SMARTS Parse Error: Failed parsing SMARTS '[#6;R' for input: '[#6;R'
69: [10:14:58] SMARTS for SMARTSQ '[#6;R' could not be parsed or has no atoms. Ignoring it.
69: [10:14:58] Skipping empty SMARTS value for SMARTSQ.
69: [10:14:58] unrecognized QUERYOP '>' for SMARTSQ. Query ignored.
69: [10:14:58] Found a SCD/SED line with missing/empty SDT specification at line 12
69: [10:14:58] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
69: [10:14:58] Warning: molecule is tagged as 3D, but all Z coords are zero
69: [10:14:58] WARNING: Skipping property bar because the value includes an illegal blank line
69: [10:14:58] WARNING: Skipping property baz because the value includes an illegal blank line
69: [10:14:58] WARNING: Skipping property bletch
69: nope because the name includes a newline
69: [10:14:58] WARNING: Skipping property bletch
69: nope2 because the name includes a newline
69: [10:14:58] 
69: 
69: ****
69: Post-condition Violation
69: Element 'ARY' not found
69: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
69: Failed Expression: anum > -1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Post-condition Violation
69: Element 'ARY' not found
69: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
69: Failed Expression: anum > -1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Post-condition Violation
69: Element 'ARY' not found
69: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
69: Failed Expression: anum > -1
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Post-condition Violation
69: Element 'ARY' not found
69: Violation occurred on line 93 in file ./Code/GraphMol/PeriodicTable.h
69: Failed Expression: anum > -1
69: ****
69: 
69: [10:14:58]  atom 3 has a negative isotope value. line:  15
69: [10:14:58] 
69: 
69: ****
69: Invariant Violation
69: bad prop value
69: Violation occurred on line 158 in file ./Code/GraphMol/FileParsers/MaeMolSupplier.cpp
69: Failed Expression: nSwaps < 2
69: ****
69: 
69: [10:14:58] 
69: 
69: ****
69: Pre-condition Violation
69: no input stream
69: Violation occurred on line 467 in file ./Code/GraphMol/FileParsers/MaeMolSupplier.cpp
69: Failed Expression: dp_sInStream
69: ****
69: 
69: [10:14:59] ERROR: molecules without atoms cannot be exported to Maestro files.
69: [10:14:59] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
69: [10:14:59] ERROR: the mol cannot be kekulized, and will not be written to the output file.
69: [10:14:59] ERROR: Bond 0 has a type that is not supported by maeparser. The mol will not be written to the output file.
69: ===============================================================================
69: All tests passed (1227 assertions in 81 test cases)
69: 
 66/213 Test  #69: fileParsersCatchTest ...................   Passed    1.43 sec
test 70
        Start  70: testPropertyLists

70: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/testPropertyLists
70: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
70: Test timeout computed to be: 1500
70: ===============================================================================
70: All tests passed (95 assertions in 4 test cases)
70: 
 67/213 Test  #70: testPropertyLists ......................   Passed    0.35 sec
test 71
        Start  71: XYZFileParserCatchTest

71: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/XYZFileParserCatchTest
71: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
71: Test timeout computed to be: 1500
71: ===============================================================================
71: All tests passed (100 assertions in 2 test cases)
71: 
 68/213 Test  #71: XYZFileParserCatchTest .................   Passed    0.32 sec
test 72
        Start  72: cdxmlParserCatchTest

72: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/cdxmlParserCatchTest
72: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
72: Test timeout computed to be: 1500
72: [10:15:00] Invalid or missing fragment id from CDXML fragment, assigning new one...
72: [10:15:00] Explicit valence for atom # 3 N, 4, is greater than permitted
72: [10:15:00] CDXMLParser: failed sanitizing skipping fragment 32
72: [10:15:00] Bad bond in CDXML skipping fragment 58...
72: [10:15:00] Invalid or missing fragment id from CDXML fragment, assigning new one...
72: [10:15:00] Bad bond in CDXML skipping fragment 58...
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] WARNING: not removing hydrogen atom without neighbors
72: [10:15:00] CDXMLParser: Schema 80180 step 80181 ReactionStepAgents fragment 64603 not found in document.
72: [10:15:00] Incomplete atom labelling, cannot make bond
72: [10:15:00] Incomplete atom labelling, cannot make bond
72: [10:15:01] Incomplete atom labelling, cannot make bond
72: [10:15:01] Failed to parse XML fragment 5 node: n attribute: id: mydoghasfleas
72: [10:15:01] Failed to parse XML fragment 5 node: n attribute: id: mydoghasfleas
72: [10:15:01] Failed to parse XML fragment 5 node: b attribute: Order: slartibartfast
72: [10:15:01] Failed to parse XML fragment 5 node: b attribute: Order: 5
72: ===============================================================================
72: All tests passed (251 assertions in 3 test cases)
72: 
 69/213 Test  #72: cdxmlParserCatchTest ...................   Passed    1.19 sec
test 73
        Start  73: molfileStereoCatchTest

73: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/molfileStereoCatchTest
73: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers
73: Test timeout computed to be: 1500
73: ===============================================================================
73: All tests passed (77 assertions in 4 test cases)
73: 
 70/213 Test  #73: molfileStereoCatchTest .................   Passed    0.39 sec
test 74
        Start  74: testSubstructMatch

74: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/testSubstructMatch
74: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct
74: Test timeout computed to be: 1500
74:  ----------------- Test 1
74: Done
74: 
74:  ----------------- Test 2
74: Done
74: 
74:  ----------------- Test 3
74: Done
74: 
74:  ----------------- Test 4
74: Done
74: 
74:  ----------------- Test 5
74: Done
74: 
74:  ----------------- Test 5 QueryRoot
74: Done
74: 
74:  ----------------- Test 6 (Issue71 related)
74: Done
74: 
74:  ----------------- Testing serial numbers on recursive queries
74: Done
74: 
74: [10:15:01] -------------------------------------
74: [10:15:01]     Test multithreading
74: reading molecules
74:  hits: 1111110111111111111111011111100011011011111101010111011110111101111111111111111111111011111011111110
74: processing
74:  launch :0
74:  launch :1
74:  launch :2
74:  launch :3
74:  done
74:  hits2: 1111110111111111111111011111100011011011111101010111011110111101111111111111111111111011111011111110
74: processing2
74:  launch2 :0
74:  launch2 :1
74:  launch2 :2
74:  launch2 :3
74:  done
74:  preprocessing 3
74:  hits3: 1110100011001000010011100110100011011000010101000100110010101111011100101000001111110000010100100110
74: processing3
74:  launch3 :0
74:  launch3 :1
74:  launch3 :2
74:  launch3 :3
74:  done
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test GitHub issue 15
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test GitHub issue 409
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test chiral matching
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test GitHub issue 688: partially specified chiral substructure queries don't work properly
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test dative-bond matching
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test cis/trans matching
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Test cis/trans matching part 2
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Testing Github #1389: Substructure matching with chirality failure when query is built from SMARTS
74: [10:15:05]   done
74: [10:15:05] -------------------------------------
74: [10:15:05]     Testing matching E/Z against Cis/Trans stereo bonds
74: [10:15:05] 
74: 
74: ****
74: Pre-condition Violation
74: matches must not be empty
74: Violation occurred on line 44 in file ./Code/GraphMol/Substruct/SubstructUtils.cpp
74: Failed Expression: !matches.empty()
74: ****
74: 
74: [10:15:05] 
74: 
74: ****
74: Pre-condition Violation
74: matches must not be empty
74: Violation occurred on line 44 in file ./Code/GraphMol/Substruct/SubstructUtils.cpp
74: Failed Expression: !matches.empty()
74: ****
74: 
74: [10:15:05] -------------------------------------
74: [10:15:05] Test substructure matching with a pathological case for symmetric SSSR
74: [10:15:05] -------------------------------------
74: [10:15:05] Test isAtomTerminalRGroupOrQueryHydrogen
 71/213 Test  #74: testSubstructMatch .....................   Passed    3.85 sec
test 75
        Start  75: substructTestCatch

75: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/substructTestCatch
75: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct
75: Test timeout computed to be: 1500
60: [10:15:06] Warning: molecule is tagged as 3D, but all Z coords are zero
60: [10:15:06] Warning: molecule is tagged as 3D, but all Z coords are zero
60: ----------------------------------
60: ----------------------------------
60: [10:15:06] 
60: 
60: ****
60: Pre-condition Violation
60: rlabel out of range for MDL files
60: Violation occurred on line 799 in file ./Code/GraphMol/Atom.cpp
60: Failed Expression: rlabel >= 0 && rlabel < 100
60: ****
60: 
60: [10:15:06] WARNING: could not find number of expected rings. Switching to an approximate ring finding algorithm.
75: ===============================================================================
75: All tests passed (111 assertions in 6 test cases)
75: 
 72/213 Test  #75: substructTestCatch .....................   Passed    1.92 sec
test 76
        Start  76: testGenericGroups

76: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups/testGenericGroups
76: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/GenericGroups
76: Test timeout computed to be: 1500
76: ===============================================================================
76: All tests passed (490 assertions in 18 test cases)
76: 
 73/213 Test  #76: testGenericGroups ......................   Passed    0.47 sec
test 77
        Start  77: testReaction

77: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/testReaction
77: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions
77: Test timeout computed to be: 1500
77: smi: O=C1CNC(=O)CN1
77: 1: O=C1CNC(=O)CN1
77: 2: COOC
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: [Q:1][C:2][C:3](=[O:4])[O:5]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '[Q:1][C:2][C:3](=[O:4])[O:5]' for input: '[Q:1][C:2][C:3](=[O:4])[O:5]'
77: O=C1CNC(=O)CN1
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 4 
77: [10:15:08] atom 0 in product 0 has multiple charge specifications.
77:  mass: 15.0001
77: Oc1ccccn1
77: Oc1ccc[nH]1
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: ([C:1](=O)O.[C:2]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '([C:1](=O)O.[C:2]' for input: '([C:1](=O)O.[C:2]'
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: ([C:2]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '([C:2]' for input: '([C:2]'
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: [C:1](=O)O).[C:2]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '[C:1](=O)O).[C:2]' for input: '[C:1](=O)O).[C:2]'
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: [C:2])
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '[C:2])' for input: '[C:2])'
77: [10:15:08] SMILES Parse Error: syntax error while parsing: [Q:1][C:2][C:3](=[O:4])[O:5]
77: [10:15:08] SMILES Parse Error: Failed parsing SMILES '[Q:1][C:2][C:3](=[O:4])[O:5]' for input: '[Q:1][C:2][C:3](=[O:4])[O:5]'
77: [10:15:08] reactant 2 has no mapped atoms.
77: [10:15:08] >> Atoms within one molecule have different RXN roles.
77: [10:15:08] >> Fragment 0 not included in the reaction, atoms do not have a correct RXN role.
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: ([C:1][C:2]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '([C:1][C:2]' for input: '([C:1][C:2]'
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: ([C:2]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '([C:2]' for input: '([C:2]'
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: [C:1][C:2])
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '[C:1][C:2])' for input: '[C:1][C:2])'
77: [10:15:08] SMARTS Parse Error: syntax error while parsing: [C:1]).[C:2]
77: [10:15:08] SMARTS Parse Error: Failed parsing SMARTS '[C:1]).[C:2]' for input: '[C:1]).[C:2]'
77: [10:15:08] reactant 0 has no mapped atoms.
77: [10:15:08] reactant 1 has no mapped atoms.
77: [10:15:08] reactant 3 has no mapped atoms.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 5 found multiple times.
77: [10:15:08] product atom-mapping number 6 found multiple times.
77: [10:15:08] product atom-mapping number 7 found multiple times.
77: [10:15:08] product atom-mapping number 8 found multiple times.
77: [10:15:08] product atom-mapping number 12 found multiple times.
77: [10:15:08] product atom-mapping number 9 found multiple times.
77: [10:15:08] product atom-mapping number 10 found multiple times.
77: [10:15:08] product atom-mapping number 11 found multiple times.
77: [10:15:08] reactant 0 has no mapped atoms.
77: [10:15:08] reactant 1 has no mapped atoms.
77: [10:15:08] reactant 3 has no mapped atoms.
77: [10:15:08] reactant atom-mapping number 19 found multiple times.
77: [10:15:08] reactant atom-mapping number 25 found multiple times.
77: [10:15:08] reactant atom-mapping number 20 found multiple times.
77: [10:15:08] reactant atom-mapping number 21 found multiple times.
77: [10:15:08] reactant atom-mapping number 22 found multiple times.
77: [10:15:08] reactant atom-mapping number 23 found multiple times.
77: [10:15:08] reactant atom-mapping number 24 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: F[C@@](Cl)(Br)ONO[C@](F)(Cl)Br
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: F[C@](Cl)(Br)ONO[C@](F)(Cl)Br
77: [10:15:08] product atom-mapping number 5 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 5 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: F[C@@](Cl)(Br)ONO[C@](F)(Cl)Br
77: [10:15:08] product atom-mapping number 5 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 5 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: F[C@](Cl)(Br)ONO[C@](F)(Cl)Br
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: F[C@@](Cl)(Br)O[C@](F)(Cl)Br
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: F[C@](Cl)(Br)O[C@](F)(Cl)Br
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 4 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 4 
77: [10:15:08] product atom-mapping number 3 found multiple times.
77: [10:15:08] product atom-mapping number 2 found multiple times.
77: [10:15:08] product atom-mapping number 1 found multiple times.
77: [10:15:08] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 4 
77: [10:15:08] product atom-mapping number 6 not found in reactants.
77: [10:15:08] product atom-mapping number 7 not found in reactants.
77: [10:15:08] product atom-mapping number 8 not found in reactants.
77: [10:15:08] product atom-mapping number 7 not found in reactants.
77: [10:15:08] product atom-mapping number 8 not found in reactants.
77: [10:15:08] product atom-mapping number 9 not found in reactants.
77: [10:15:08] product atom-mapping number 10 not found in reactants.
77: [10:15:08] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 6 
77: [10:15:08] product atom-mapping number 7 not found in reactants.
77: [10:15:08] product atom-mapping number 8 not found in reactants.
77: [10:15:08] product atom-mapping number 9 not found in reactants.
77: [10:15:08] product atom-mapping number 10 not found in reactants.
77: [10:15:08] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 6 
77: smi1 [C:1][C:2][C:3]([O:4])([N:5])[Cl:6]>>[C:1][C:3]([C:2])([O:4])[N:5].[ClH:6]
77: smi2 [C:1][C:2][C:3]([O:4])([N:5])[Cl:6]>>[C:1][C:3]([C:2])([O:4])[N:5].[ClH:6]
77: [10:15:09] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 7 8 9 10 11 12 13 14 15 16 
60: [10:15:09] SMARTS Parse Error: syntax error while parsing: MyDogHasFleas
60: [10:15:09] SMARTS Parse Error: Failed parsing SMARTS 'MyDogHasFleas' for input: 'MyDogHasFleas'
77: [10:15:09] product atom-mapping number 17 not found in reactants.
77: [10:15:09] product atom-mapping number 18 not found in reactants.
77: [10:15:09] mapped atoms in the reactants were not mapped in the products.
77:   unmapped numbers are: 12 
60: [10:15:09] Empty atom list: 'M  ALS   1  0 F' on line 8.
 74/213 Test  #60: fileParsersTest1 .......................   Passed   79.33 sec
test 78
        Start  78: testReactionFingerprints

78: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/testReactionFingerprints
78: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions
78: Test timeout computed to be: 1500
78: [10:15:09] -------------------------------------
78: [10:15:09]     Test Reaction StructuralFingerprint
78: [10:15:09] -------------------------------------
78: [10:15:09]     Test Reaction DifferenceFingerprint
 75/213 Test  #78: testReactionFingerprints ...............   Passed    0.34 sec
test 79
        Start  79: testEnumeration

79: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/testEnumeration
79: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions
79: Test timeout computed to be: 1500
77: [10:15:09] Reaction has explicit hydrogens, reactants will need explicit hydrogens (addHs)
77: [10:15:09] Reaction has explicit hydrogens, reactants will need explicit hydrogens (addHs)
77: 
77: [10:15:09] Mismatched potential rlabels: 1 unmapped reactant dummy atom rlabels,0 unmappped product dummy atom rlabels
77: -------------
77: CCOc1ccccc1
25: Checking against /<<PKGBUILDDIR>>/Code/ForceField/MMFF/test_data/MMFF94_reference.log...
79: 30000000 30000000
77: [10:15:11] reactant 0 has no mapped atoms.
77: [10:15:11] product 0 has no mapped atoms.
77: [10:15:11] WARNING: neither stereo atoms nor CIP codes found for double bond. Stereochemistry info will not be propagated to product.
 76/213 Test  #77: testReaction ...........................   Passed    3.87 sec
test 80
        Start  80: rxnTestCatch

80: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/rxnTestCatch
80: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions
80: Test timeout computed to be: 1500
25: All 191 tests passed
25:   done
25: -------------------------------------
25: Unit tests for all MMFF constraint terms.
80: [10:15:12] atom 0 in product 0 has multiple charge specifications.
80: [10:15:12] mapped atoms in the reactants were not mapped in the products.
80:   unmapped numbers are: 2 
80: [10:15:12] mapped atoms in the reactants were not mapped in the products.
80:   unmapped numbers are: 2 
80: [10:15:12] SMARTS Parse Error: unclosed ring for input: 'CC1'
80: [10:15:12] SMILES Parse Error: unclosed ring for input: 'CC1'
25: 10.0003
80: [10:15:12] mapped atoms in the reactants were not mapped in the products.
80:   unmapped numbers are: 2 
80: [10:15:12] product atom-mapping number 2 not found in reactants.
80: [10:15:12] mapped atoms in the reactants were not mapped in the products.
80:   unmapped numbers are: 2 
80: [10:15:12] product atom-mapping number 2 not found in reactants.
80: [10:15:12]  deprecated -- please use MatchOnlyAtRgroupsAdjustParams instead
80: ===============================================================================
80: All tests passed (541 assertions in 18 test cases)
80: 
 77/213 Test  #80: rxnTestCatch ...........................   Passed    0.84 sec
test 81
        Start  81: pyChemReactions

81: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/testReactionWrapper.py"
81: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap
81: Test timeout computed to be: 1500
25:   done
25: -------------------------------------
25: Unit test for MMFF TorsionConstraint close to 0 degrees.
25:   done
25: -------------------------------------
25: Unit tests for copying MMFF ForceFields.
25:   done
25: -------------------------------------
25: Unit test for MMFF butane scan.
25:   done
 78/213 Test  #25: testMMFFForceField .....................   Passed  178.03 sec
test 82
        Start  82: pyChemReactionEnumerations

82: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/testEnumerations.py"
82: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap
82: Test timeout computed to be: 1500
81: [10:15:15] 
81: 
81: ****
81: Pre-condition Violation
81: getNumImplicitHs() called without preceding call to calcImplicitValence()
81: Violation occurred on line 297 in file ./Code/GraphMol/Atom.cpp
81: Failed Expression: d_implicitValence > -1
81: ****
81: 
81: [10:15:15] 
81: 
81: ****
81: Pre-condition Violation
81: getNumImplicitHs() called without preceding call to calcImplicitValence()
81: Violation occurred on line 297 in file ./Code/GraphMol/Atom.cpp
81: Failed Expression: d_implicitValence > -1
81: ****
81: 
81: .....[10:15:15] stereo atoms in input cannot be mapped to output (atoms are no longer bonded)
81: [10:15:15] stereo atoms in input cannot be mapped to output (atoms are no longer bonded)
81: [10:15:15] stereo atoms in input cannot be mapped to output (atoms are no longer bonded)
81: [10:15:15] stereo atoms in input cannot be mapped to output (atoms are no longer bonded)
81: .[10:15:15] product atom-mapping number 1 found multiple times.
81: [10:15:15] product atom-mapping number 1 found multiple times.
81: ................[10:15:16] mapped atoms in the reactants were not mapped in the products.
81:   unmapped numbers are: 3 
81: [10:15:16] mapped atoms in the reactants were not mapped in the products.
81:   unmapped numbers are: 3 
81: .[10:15:16] mapped atoms in the reactants were not mapped in the products.
81:   unmapped numbers are: 3 
81: ..[10:15:16] reactant 2 has no mapped atoms.
81: [10:15:16] reactant 2 has no mapped atoms.
81: [10:15:16] product 1 has no mapped atoms.
81: ........[10:15:16] SMARTS Parse Error: syntax error while parsing: [C:1](=[O:2])Q
81: [10:15:16] SMARTS Parse Error: Failed parsing SMARTS '[C:1](=[O:2])Q' for input: '[C:1](=[O:2])Q'
81: [10:15:16] SMARTS Parse Error: syntax error while parsing: [C:1](=[O:2])[N:3]Q
81: [10:15:16] SMARTS Parse Error: Failed parsing SMARTS '[C:1](=[O:2])[N:3]Q' for input: '[C:1](=[O:2])[N:3]Q'
81: .[10:15:16] reactant atom-mapping number 1 found multiple times.
81: [10:15:16] product atom-mapping number 2 not found in reactants.
81: [10:15:16] mapped atoms in the reactants were not mapped in the products.
81:   unmapped numbers are: 4 
81: [10:15:16] product atom-mapping number 5 not found in reactants.
81: ........./<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/testReactionWrapper.py:742: ResourceWarning: unclosed file <_io.BufferedReader name='/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testData/reaction1.no_metadata.png'>
81:   png = open(fname, 'rb').read()
81: ResourceWarning: Enable tracemalloc to get the object allocation traceback
81: ..[10:15:17] SMARTS Parse Error: syntax error while parsing: boromicacid
81: [10:15:17] SMARTS Parse Error: Failed parsing SMARTS 'boromicacid' for input: 'boromicacid'
81: [10:15:17] SMARTS Parse Error: syntax error while parsing: carboxylicacid,acidchlroide
81: [10:15:17] SMARTS Parse Error: Failed parsing SMARTS 'carboxylicacid,acidchlroide' for input: 'carboxylicacid,acidchlroide'
81: [10:15:17] SMARTS Parse Error: syntax error while parsing: carboxyliccaid,acidchloride
81: [10:15:17] SMARTS Parse Error: Failed parsing SMARTS 'carboxyliccaid,acidchloride' for input: 'carboxyliccaid,acidchloride'
81: [10:15:17] reaction has no reactants
81: [10:15:17] reaction has no products
81: [10:15:17] initialization failed
81: [10:15:17] reaction has no reactants
81: [10:15:17] reaction has no products
81: .[10:15:17] SMARTS Parse Error: syntax error while parsing: boromicacid
81: [10:15:17] SMARTS Parse Error: Failed parsing SMARTS 'boromicacid' for input: 'boromicacid'
81: [10:15:17] SMARTS Parse Error: syntax error while parsing: carboxylicacid,acidchlroide
81: [10:15:17] SMARTS Parse Error: Failed parsing SMARTS 'carboxylicacid,acidchlroide' for input: 'carboxylicacid,acidchlroide'
81: [10:15:17] SMARTS Parse Error: syntax error while parsing: carboxyliccaid,acidchloride
81: [10:15:17] SMARTS Parse Error: Failed parsing SMARTS 'carboxyliccaid,acidchloride' for input: 'carboxyliccaid,acidchloride'
81: [10:15:17] reaction has no reactants
81: [10:15:17] reaction has no products
81: [10:15:17] initialization failed
81: [10:15:17] reaction has no reactants
81: [10:15:17] reaction has no products
81: .
81: ----------------------------------------------------------------------
81: Ran 47 tests in 1.802s
81: 
81: OK
81: ********************************************
81: /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testData/AmideBond.rxn
81: <rdkit.Chem.rdChemReactions.ChemicalReaction object at 0xb32e1e68>
82: [10:15:17] == testCartesianProduct
 79/213 Test  #81: pyChemReactions ........................   Passed    5.11 sec
test 83
        Start  83: pyChemReactionSanitize

83: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/testSanitize.py"
83: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap
83: Test timeout computed to be: 1500
82: .[10:15:17] == testEnumerateLibrary
82: /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/testEnumerations.py:266: ResourceWarning: unclosed file <_io.BufferedReader name='/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testData/enumeration.pickle'>
82:   open(os.path.join(self.dataDir, "enumeration.pickle"), 'rb').read())
82: ResourceWarning: Enable tracemalloc to get the object allocation traceback
82: ..[10:15:18] == testRGroupState
82: .[10:15:18] == testRandomEnumerateAllBBsLibrary
82: ** [1, 1]
82: ** [0, 2]
82: ** [1, 0]
82: .[10:15:18] == testRandomEnumerateLibrary
82: .[10:15:18] == testRandomSample
82: .[10:15:19] == testRandomSampleAllBBs
83: .[10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: .[10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] reactant 0 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] product 0 has no mapped atoms.
83: [10:15:19] Could not find RLabel mapping for atom: 0 in template: 1
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: [10:15:19] reactant 1 has no mapped atoms.
83: ()
83: ********************************************
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:   1  2  1  0
83: M  RGP  1   2   1
83: V    1 halogen.bromine.aromatic
83: V    2 [*:1]
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: M  RGP  1   1   2
83: V    1 [*:2]
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:    11.9811   -6.9292    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:   1  2  1  0
83: M  RGP  2   1   1   2   2
83: V    1 [*:1]
83: V    2 [*:2]
83: M  END
83: 
83: >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:   1  2  1  0
83: M  RGP  1   2   1
83: V    1 halogen.bromine.aromatic
83: V    2 [*:1]
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: M  RGP  1   1   2
83: V    1 [*:2]
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:    11.9811   -6.9292    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:   1  2  1  0
83: M  RGP  2   1   1   2   2
83: V    1 [*:1]
83: V    2 [*:2]
83: M  END
83: 
83: ********************************************
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R#  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: M  RGP  1   2   1
83: V    1 halogen.bromine.aromatic
83: V    2 *
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R#  0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: M  RGP  1   1   2
83: V    1 *
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R#  0  0  0  0  0  0  0  0  0  0  0  0
83:    11.9811   -6.9292    0.0000 R#  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: M  RGP  2   1   1   2   2
83: V    1 *
83: V    2 *
83: M  END
83: 
83: >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:   1  2  1  0
83: M  RGP  1   2   1
83: V    1 halogen.bromine.aromatic
83: V    2 [*:1]
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: M  RGP  1   1   2
83: V    1 [*:2]
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:    11.9811   -6.9292    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:   1  2  1  0
83: M  RGP  2   1   1   2   2
83: V    1 [*:1]
83: V    2 [*:2]
83: M  END
83: 
83: ********************************************
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R1  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: V    1 halogen.bromine.aromatic
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R2  0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R1  0  0  0  0  0  0  0  0  0  0  0  0
83:    11.9811   -6.9292    0.0000 R2  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: M  END
83: 
83: >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:   1  2  1  0
83: M  RGP  1   2   1
83: V    1 halogen.bromine.aromatic
83: V    2 [*:1]
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: M  RGP  1   1   2
83: V    1 [*:2]
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:    11.9811   -6.9292    0.0000 R#  0  0  0  0  0  0  0  0  0  2  0  0
83:   1  2  1  0
83: M  RGP  2   1   1   2   2
83: V    1 [*:1]
83: V    2 [*:2]
83: M  END
83: 
83: ********************************************
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R1  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: V    1 halogen.bromine.aromatic
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R3  0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R1  0  0  0  0  0  0  0  0  0  0  0  0
83:    11.9811   -6.9292    0.0000 R2  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: M  END
83: 
83: >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
83: ..
83: ----------------------------------------------------------------------
83: Ran 4 tests in 0.247s
83: 
83: OK
83: $RXN
83: 
83:       RDKit
83: 
83:   2  1
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    -3.2730   -7.0542    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
83:    -3.9875   -7.4667    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:   1  2  1  0
83: M  RGP  1   2   1
83: V    1 halogen.bromine.aromatic
83: V    2 [*:1]
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   4  3  0  0  0  0  0  0  0  0999 V2000
83:     3.4375   -7.7917    0.0000 R3  0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -7.3792    0.0000 B   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.1520   -6.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:     4.8664   -7.7917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
83:   2  3  1  0
83:   1  2  1  0
83:   2  4  1  0
83: V    2 boronicacid
83: M  END
83: $MOL
83: 
83:      RDKit          2D
83: 
83:   2  1  0  0  0  0  0  0  0  0999 V2000
83:    11.2667   -7.3417    0.0000 R#  0  0  0  0  0  0  0  0  0  1  0  0
83:    11.9811   -6.9292    0.0000 R2  0  0  0  0  0  0  0  0  0  0  0  0
83:   1  2  1  0
83: M  RGP  1   1   1
83: V    1 [*:1]
83: M  END
83: 
83: $RXN Failed
82: .[10:15:19]  deprecated -- please use MatchOnlyAtRgroupsAdjustParams instead
82: [10:15:19]  deprecated -- please use MatchOnlyAtRgroupsAdjustParams instead
82: .[10:15:19] == testRemoveBadMatches
82: .[10:15:19] == testTimings
 80/213 Test  #83: pyChemReactionSanitize .................   Passed    2.34 sec
test 84
        Start  84: testChemTransforms

84: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/testChemTransforms
84: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms
84: Test timeout computed to be: 1500
84: 1 smi: CC
84: 1 smi: CC
84: 2 smi: CCO[C@H](N)P
84: 2 smi: CC
84: replaceSub smi1:CCP(CC)[C@@H](N)O
84: replaceSub smi1:CCNCC
84: sidechains chiral=true smi1;;; [1*]P([2*])[C@H](N)O
84: sidechains chiral=false smi1;;; [1*]P([2*])[C@H](N)O
84: [10:15:20] SMARTS Parse Error: syntax error while parsing: bar
84: [10:15:20] SMARTS Parse Error: Failed parsing SMARTS 'bar' for input: 'bar'
 81/213 Test  #84: testChemTransforms .....................   Passed    0.66 sec
test 85
        Start  85: chemTransformsTestCatch

85: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/chemTransformsTestCatch
85: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms
85: Test timeout computed to be: 1500
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] 
85: 
85: ****
85: Invariant Violation
85: molzip: bond info already exists for end atom with label:1
85: Violation occurred on line 997 in file ./Code/GraphMol/ChemTransforms/MolFragmenter.cpp
85: Failed Expression: !bond.b
85: ****
85: 
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] 
85: 
85: ****
85: Invariant Violation
85: molzip: bond info already exists for end atom with label:1
85: Violation occurred on line 997 in file ./Code/GraphMol/ChemTransforms/MolFragmenter.cpp
85: Failed Expression: !bond.b
85: ****
85: 
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] 
85: 
85: ****
85: Invariant Violation
85: molzip: bond info already exists for end atom with label:1
85: Violation occurred on line 997 in file ./Code/GraphMol/ChemTransforms/MolFragmenter.cpp
85: Failed Expression: !bond.b
85: ****
85: 
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] 
85: 
85: ****
85: Invariant Violation
85: molzip: bond info already exists for end atom with label:1
85: Violation occurred on line 997 in file ./Code/GraphMol/ChemTransforms/MolFragmenter.cpp
85: Failed Expression: !bond.b
85: ****
85: 
85: [10:15:21] Incomplete atom labelling, cannot make bond
85: [10:15:21] 
85: 
85: ****
85: Invariant Violation
85: molzip: bond info already exists for end atom with label:1
85: Violation occurred on line 997 in file ./Code/GraphMol/ChemTransforms/MolFragmenter.cpp
85: Failed Expression: !bond.b
85: ****
85: 
85: [10:15:21] 
85: 
85: ****
85: Invariant Violation
85: molzip: zipped Bond already exists, perhaps labels are duplicated
85: Violation occurred on line 740 in file ./Code/GraphMol/ChemTransforms/MolFragmenter.cpp
85: Failed Expression: params.label == MolzipLabel::FragmentOnBonds || !a->getOwningMol().getBondBetweenAtoms(a->getIdx(), b->getIdx())
85: ****
85: 
85: ===============================================================================
85: All tests passed (667 assertions in 7 test cases)
85: 
 82/213 Test  #85: chemTransformsTestCatch ................   Passed    0.91 sec
test 86
        Start  86: tautomerQueryTestCatch

86: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/tautomerQueryTestCatch
86: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery
86: Test timeout computed to be: 1500
86: ===============================================================================
86: All tests passed (86 assertions in 12 test cases)
86: 
 83/213 Test  #86: tautomerQueryTestCatch .................   Passed    1.66 sec
test 87
        Start  87: pyTautomerQuery

87: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/TautomerQuery/Wrap/rough_test.py"
87: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/TautomerQuery/Wrap
87: Test timeout computed to be: 1500
87: .....
87: ----------------------------------------------------------------------
87: Ran 5 tests in 0.354s
87: 
87: OK
 84/213 Test  #87: pyTautomerQuery ........................   Passed    2.12 sec
test 88
        Start  88: testSubgraphs1

88: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/testSubgraphs1
88: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs
88: Test timeout computed to be: 1500
88: -----------------------
88:  Subgraph retrieval
88: Finished
88: -----------------------
88:  testSubgraphs2a
88: Finished
88: -----------------------
88:  testSubgraphs2
88: Finished
88: -----------------------
88:  Path retrieval
88: Finished
88: -----------------------
88:  Path retrieval2
88: Finished
88: -----------------------
88:  Unique Subgraph retrieval
88: Finished
88: -----------------------
88:  testUniqueSubgraphs2
88: Finished
88: -----------------------
88:  testRootedSubgraphs
88: Finished
88: -----------------------
88:  testRootedPaths
88: Finished
 85/213 Test  #88: testSubgraphs1 .........................   Passed    2.03 sec
test 89
        Start  89: testSubgraphs2

89: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/testSubgraphs2
89: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs
89: Test timeout computed to be: 1500
89: -----------------------
89:  Test1: pathToSubmol
89: Finished
89: -----------------------
89:  Test2: Atom Environments
89: Finished
89: -----------------------
89: Test 3: Atom Environments (Extension)
89: Finished
89: -----------------------
89:  Testing github Issue103: stereochemistry and pathToSubmol
89: Finished
89: -----------------------
89:  Testing github Issue103: more stereochemistry and pathToSubmol (path needs to be in sorted order)
89: Finished
 86/213 Test  #89: testSubgraphs2 .........................   Passed    0.22 sec
test 90
        Start  90: subgraphsCatch

90: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/subgraphsCatch
90: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs
90: Test timeout computed to be: 1500
90: ---------
90: ===============================================================================
90: All tests passed (11 assertions in 1 test case)
90: 
 87/213 Test  #90: subgraphsCatch .........................   Passed    0.23 sec
test 91
        Start  91: filterCatalogTest

91: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/filterCatalogTest
91: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog
91: Test timeout computed to be: 1500
91: Warning: molecule failed filter 
91: Warning: molecule failed filter: reason hzone_phenol_A(479)
91: v = { 
91: 	0,23},
91: 	1,22},
91: 	2,20},
91: 	3,19},
91: 	4,25},
91: 	5,24},
91: 	6,18},
91: 	7,17},
91: 	8,16},
91: 	9,21},
91: }
91: match = { 
91: 	0,23},
91: 	1,22},
91: 	2,20},
91: 	3,19},
91: 	4,25},
91: 	5,24},
91: 	6,18},
91: 	7,17},
91: 	8,16},
91: 	9,21},
91: }
91: Warning: molecule failed filter 
91: Warning: molecule failed filter: reason cyano_imine_B(17)
91: v = { 
91: 	0,11},
91: 	1,12},
91: 	2,13},
91: 	3,14},
91: 	4,15},
91: 	5,10},
91: 	6,9},
91: 	7,8},
91: 	8,7},
91: 	9,6},
91: 	10,5},
91: 	11,17},
91: 	12,16},
91: }
91: match = { 
91: 	0,11},
91: 	1,12},
91: 	2,13},
91: 	3,14},
91: 	4,15},
91: 	5,10},
91: 	6,9},
91: 	7,8},
91: 	8,7},
91: 	9,6},
91: 	10,5},
91: 	11,17},
91: 	12,16},
91: }
91: Warning: molecule failed filter 
91: Warning: molecule failed filter: reason keto_keto_gamma(5)
91: v = { 
91: 	0,0},
91: 	1,1},
91: 	2,2},
91: 	3,4},
91: 	4,5},
91: 	5,6},
91: 	6,7},
91: 	7,8},
91: 	8,9},
91: 	9,14},
91: 	10,15},
91: 	11,16},
91: }
91: match = { 
91: 	0,0},
91: 	1,1},
91: 	2,2},
91: 	3,4},
91: 	4,5},
91: 	5,6},
91: 	6,7},
91: 	7,8},
91: 	8,9},
91: 	9,14},
91: 	10,15},
91: 	11,16},
91: }
 88/213 Test  #91: filterCatalogTest ......................   Passed    1.86 sec
test 92
        Start  92: pyFilterCatalog

92: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rough_test.py"
92: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap
92: Test timeout computed to be: 1500
92: .............[10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: [10:15:36] SMILES Parse Error: syntax error while parsing: ---
92: [10:15:36] SMILES Parse Error: Failed parsing SMILES '---' for input: '---'
92: [10:15:36] dasfsadf
92: .[10:15:37] SMILES Parse Error: syntax error while parsing: mydoghasfleas
92: [10:15:37] SMILES Parse Error: Failed parsing SMILES 'mydoghasfleas' for input: 'mydoghasfleas'
92: .......
92: ----------------------------------------------------------------------
92: Ran 21 tests in 6.401s
92: 
92: OK
92: (Five aromatic carbons And (Not any of Five aromatic carbons))
92: (Five aromatic carbons Or (Not any of Five aromatic carbons))
92: (Not (Five aromatic carbons And (Not any of Five aromatic carbons)))
92: ********************************************
92: Testing: PAINS_A 2
92: ********************************************
92: Testing: PAINS_B 4
92: ********************************************
92: Testing: PAINS_C 8
92: ********************************************
92: Testing: PAINS 14
92: (Not FilterMatcher)
92: Bar
92: Count 1
92: ********************************************
92: {'Cl,Br,I'}
92: 1
92: 2
92: running
 89/213 Test  #92: pyFilterCatalog ........................   Passed    8.36 sec
test 93
        Start  93: testFragCatalog

93: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/testFragCatalog
93: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog
93: Test timeout computed to be: 1500
93:  21
82: .
82: ----------------------------------------------------------------------
82: Ran 11 tests in 22.198s
82: 
82: OK
82: True
82: == CartesianProductStrategy CartesianProductStrategy
82: 197 out of 300
82: 0 6 out of 10
82: 1 3 out of 5
82: 2 4 out of 6
82: 198 out of 300
82: 0 10 out of 10
82: 1 5 out of 5
82: 2 6 out of 6
82: <rdkit.Chem.rdChemReactions.CartesianProductStrategy object at 0xb3d80fa0> Skipped 10000000 in 0.4461231231689453 seconds
82: <rdkit.Chem.rdChemReactions.RandomSampleStrategy object at 0xb3d80aa0> Skipped 10000000 in 16.33945870399475 seconds
82: <rdkit.Chem.rdChemReactions.RandomSampleAllBBsStrategy object at 0xb3d80d20> Skipped 10000000 in 1.8817222118377686 seconds
 90/213 Test  #82: pyChemReactionEnumerations .............   Passed   24.44 sec
test 94
        Start  94: pyFragCatalog

94: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rough_test.py"
94: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap
94: Test timeout computed to be: 1500
94: .........
94: ----------------------------------------------------------------------
94: Ran 9 tests in 0.569s
94: 
94: OK
 91/213 Test  #94: pyFragCatalog ..........................   Passed    2.62 sec
test 95
        Start  95: testDescriptors

95: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testDescriptors
95: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
95: Test timeout computed to be: 1500
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test Crippen parameter acquisition.
95: [10:15:42]   done
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test Crippen calculation.
95: [10:15:42]   done
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test Issue262: problems with Crippen calculation from pickles.
95: [10:15:42]   done
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test AMW calculation.
95: [10:15:42]   done
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test Exact MW calculation.
95: [10:15:42]   done
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test Labute ASA descriptors.
95: [10:15:42]   done
95: [10:15:42] -------------------------------------
95: [10:15:42]     Test TPSA descriptors.
95: [10:15:43]   done
95: [10:15:43] -------------------------------------
95: [10:15:43]     Test Lipinski parameters.
95: [10:15:44]   done
95: [10:15:44] -------------------------------------
95: [10:15:44]     Test VSA descriptors.
95: [10:15:44]   done
95: [10:15:44] -------------------------------------
95: [10:15:44]     Test molecular formula calculation.
95: [10:15:44]   done
95: [10:15:44] -------------------------------------
95: [10:15:44]     Test Issue 3415534.
95: [10:15:44]   done
95: [10:15:44] -------------------------------------
95: [10:15:44]     Test Issue3433771: Bad definition for Crippen atom type O11.
95: [10:15:44]   done
95: [10:15:44] -------------------------------------
95: [10:15:44]     Test multithreading
95: reading molecules
95: processing
95:  launch :0
95:  launch :1
95:  launch :2
95:  launch :3
93: [10:15:46] 
93: 
93: ****
93: Invariant Violation
93: nonsense
93: Violation occurred on line 52 in file ./Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
93: Failed Expression: token != tokens.end()
93: ****
93: 
93: [10:15:46] 
93: 
93: ****
93: Invariant Violation
93: nonsense no new line
93: Violation occurred on line 52 in file ./Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
93: Failed Expression: token != tokens.end()
93: ****
93: 
93: [10:15:46] 
93: 
93: ****
93: Invariant Violation
93: nonsense with tab
93: Violation occurred on line 52 in file ./Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
93: Failed Expression: token != tokens.end()
93: ****
93: 
 92/213 Test  #93: testFragCatalog ........................   Passed    8.22 sec
test 96
        Start  96: testAUTOCORR2D

96: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testAUTOCORR2D
96: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
96: Test timeout computed to be: 1500
96: [10:15:46] ----------------------------
96: start test autocorr2D
96: [10:15:51]   done
96: [10:15:51] -------------------------------------
96: [10:15:51]     Test Github #3806: NaNs from AUTOCORR2D descriptor
96: [10:15:51]   done
 93/213 Test  #96: testAUTOCORR2D .........................   Passed    5.21 sec
test 97
        Start  97: testATF

97: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testATF
97: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
97: Test timeout computed to be: 1500
 94/213 Test  #97: testATF ................................   Passed    0.34 sec
test 98
        Start  98: testBCUT

98: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testBCUT
98: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
98: Test timeout computed to be: 1500
98: [10:15:52] -------------------------------------
98: [10:15:52]     Basic BCUT tests.
98: [10:15:52]   done
98: [10:15:52] -------------------------------------
98: [10:15:52]     Larger BCUT tests.
 95/213 Test  #98: testBCUT ...............................   Passed    7.29 sec
test 99
        Start  99: testEEM

99: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testEEM
99: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
99: Test timeout computed to be: 1500
99: =>start test EEM
99: 0
99: 100
99: 200
99: 300
99: 400
99: Elapsed time: 8.73759 s
99: Errors:0
99: [10:16:08] test on : 500 molecules done
 96/213 Test  #99: testEEM ................................   Passed    9.29 sec
test 100
        Start 100: testPBF

100: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testPBF
100: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
100: Test timeout computed to be: 1500
100: [10:16:08] -------------------------------------
100: [10:16:08]     Basic PBF tests.
100: [10:16:11]   done
100: [10:16:11] -------------------------------------
100: [10:16:11]     PBF edge cases.
100: [10:16:11]   done
 97/213 Test #100: testPBF ................................   Passed    2.90 sec
test 101
        Start 101: testRDFcustom

101: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testRDFcustom
101: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
101: Test timeout computed to be: 1500
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Issue252: Bad definitions for Crippen atom types.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of ChiVs.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of ChiNs.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of HallKierAlpha.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of Kappa1.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of Kappa2.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of Kappa3.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Crippen atom type calculations.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test ring descriptors
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test other count descriptors.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test MQN
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test GitHub Issue 56.
95: [10:16:16] WARNING: not removing hydrogen atom without neighbors
95: [10:16:16] WARNING: not removing hydrogen atom without neighbors
95: [10:16:16] WARNING: not removing hydrogen atom without neighbors
95: [10:16:16] WARNING: not removing hydrogen atom without neighbors
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Github92: Bad Crippen atom type for pyrrole H.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Github362: order dependence  in Kier-Hall descriptors.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test calculation of spiro and bridgehead counts.
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Github694: ExactMolWt ignoring the mass of the electron
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Testing Properties and KitchenSink
95: [10:16:16] ---Caught keyerror (bad property name)---
95: [10:16:16] ---Caught stereo value error---
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test USR Descriptor
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Github #1702: AUTOCORR2D.h not installed unless RDK_BUILD_DESCRIPTORS3D but is required
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Github #1973: support P and S terms for TPSA calculation
95: [10:16:16]   done
95: [10:16:16] -------------------------------------
95: [10:16:16]     Test Github #2948: Empty molecule has non-zero LabuteASA
95: [10:16:16]   done
 98/213 Test  #95: testDescriptors ........................   Passed   33.88 sec
test 102
        Start 102: testRDF

102: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testRDF
102: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
102: Test timeout computed to be: 1500
101: =>start test rdf custom
101: [10:16:17] test on : 365 molecules done
102: =>start test rdf
102: [10:16:20] test on : 365 molecules done
 99/213 Test #102: testRDF ................................   Passed    3.85 sec
test 103
        Start 103: testMORSE

103: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testMORSE
103: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
103: Test timeout computed to be: 1500
101: =>start test morse custom
101: [10:16:22] test on : 365 molecules done
103: =>start test MORSE
103: =>read file
103: [10:16:25] test on : 365 molecules done
100/213 Test #103: testMORSE ..............................   Passed    5.52 sec
test 104
        Start 104: test3D

104: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/test3D
104: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
104: Test timeout computed to be: 1500
101: =>start test AUTOCORR3D custom
101: [10:16:25] test on : 365 molecules done
104: [10:16:25] -------------------------------------
104: [10:16:25]     Basic PMI tests.
104: [10:16:27]   done
104: [10:16:27] -------------------------------------
104: [10:16:27]     More PMI/NPR tests.
104: [10:16:27]   done
104: [10:16:27] -------------------------------------
104: [10:16:27]     Basic NPR tests.
101: =>start test 2 WHIM custom
101: [10:16:28] test on : 365 molecules done
104: [10:16:29]   done
104: [10:16:29] -------------------------------------
104: [10:16:29]     PMI edge cases.
104: [10:16:29]   done
104: [10:16:29] -------------------------------------
104: [10:16:29]     NPR edge cases.
104: [10:16:29]   done
104: [10:16:29] -------------------------------------
104: [10:16:29]     3D descriptors.
104: [10:16:29]   done
104: [10:16:29] -------------------------------------
104: [10:16:29]     3D descriptor edge cases.
104: [10:16:29]   done
104: [10:16:29] -------------------------------------
104: [10:16:29]     Inertial shape factor.
104: [10:16:29]   done
101/213 Test #104: test3D .................................   Passed    3.94 sec
test 105
        Start 105: testWHIM

105: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testWHIM
105: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
105: Test timeout computed to be: 1500
101: =>start test 1 WHIM custom
101: [10:16:30] test on : 365 molecules done
105: =>start test WHIM
105: [10:16:32] test on : 365 molecules done
102/213 Test #105: testWHIM ...............................   Passed    2.82 sec
test 106
        Start 106: testGETAWAY

106: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testGETAWAY
106: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
106: Test timeout computed to be: 1500
79: 0,0 0
79: 0,1 0
79: 1,0 0
79: 1,1 0
79: 2,0 0
79: 2,1 0
103/213 Test  #79: testEnumeration ........................   Passed   94.29 sec
test 107
        Start 107: testAUTOCORR3D

107: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testAUTOCORR3D
107: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
107: Test timeout computed to be: 1500
107: =>start test autocorr3D
107: [10:16:47] test on : 365 molecules done
104/213 Test #107: testAUTOCORR3D .........................   Passed    3.52 sec
test 108
        Start 108: testCoulombMat

108: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/testCoulombMat
108: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
108: Test timeout computed to be: 1500
108: ===================== Testing CoulombMat  =======================
108: CM test 1 mat Done
105/213 Test #108: testCoulombMat .........................   Passed    0.24 sec
test 109
        Start 109: descriptorsTestCatch

109: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/descriptorsTestCatch
109: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors
109: Test timeout computed to be: 1500
109: ===============================================================================
109: All tests passed (482 assertions in 7 test cases)
109: 
106/213 Test #109: descriptorsTestCatch ...................   Passed    0.41 sec
test 110
        Start 110: pyMolDescriptors

110: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/testMolDescriptors.py"
110: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap
110: Test timeout computed to be: 1500
101: =>start test GETAWAY custom
101: [10:16:50] test on : 365 molecules done
107/213 Test #101: testRDFcustom ..........................   Passed   38.69 sec
test 111
        Start 111: pyMolDescriptors3D

111: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/test3D.py"
111: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap
111: Test timeout computed to be: 1500
106: =>start test GETAWAY
106: [10:16:50] test on : 365 molecules done
108/213 Test #106: testGETAWAY ............................   Passed   17.75 sec
test 112
        Start 112: testFingerprints

112: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/testFingerprints
112: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints
112: Test timeout computed to be: 1500
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: Atoms:
112: 	0 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	6 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 1 conj?: 1 aromatic?: 0
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 1 conj?: 1 aromatic?: 0
112: 	9 8->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 10->1 order: 12 conj?: 1 aromatic?: 1
112: 	11 7->3 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: SMI: Oc1cc2[nH]cnc2c(O)n1
112: Atoms:
112: 	0 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	6 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 1 conj?: 1 aromatic?: 0
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 1 conj?: 1 aromatic?: 0
112: 	9 8->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 10->1 order: 12 conj?: 1 aromatic?: 1
112: 	11 7->3 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: c1(O)cc2[nH]cnc2c(O)n1
112: Atoms:
112: 	0 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	2 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	6 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 1 conj?: 1 aromatic?: 0
112: 	1 0->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 1 conj?: 1 aromatic?: 0
112: 	9 8->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 10->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 7->3 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: c1c(O)nc(O)c2c1[nH]cn2
112: Atoms:
112: 	0 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	3 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	6 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 1 conj?: 1 aromatic?: 0
112: 	2 1->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 1 conj?: 1 aromatic?: 0
112: 	5 4->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 7->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 10->6 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: c12cc(O)nc(O)c1nc[nH]2
112: Atoms:
112: 	0 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	3 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	4 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	7 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 1 conj?: 1 aromatic?: 0
112: 	3 2->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 1 conj?: 1 aromatic?: 0
112: 	6 5->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 7->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 10->0 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: [nH]1c2cc(O)nc(O)c2nc1
112: Atoms:
112: 	0 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	5 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	8 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	10 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 1 conj?: 1 aromatic?: 0
112: 	4 3->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 1 conj?: 1 aromatic?: 0
112: 	7 6->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 10->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 8->1 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: c1[nH]c2cc(O)nc(O)c2n1
112: Atoms:
112: 	0 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	1 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	4 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	6 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	9 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 1 conj?: 1 aromatic?: 0
112: 	5 4->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 1 conj?: 1 aromatic?: 0
112: 	8 7->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 10->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 9->2 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: n1c[nH]c2cc(O)nc(O)c21
112: Atoms:
112: 	0 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	2 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	7 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	10 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 1 conj?: 1 aromatic?: 0
112: 	6 5->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 1 conj?: 1 aromatic?: 0
112: 	9 8->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 10->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 10->3 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: c12c(cc(O)nc1O)[nH]cn2
112: Atoms:
112: 	0 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	5 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	7 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	8 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 1 conj?: 1 aromatic?: 0
112: 	4 3->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 1 conj?: 1 aromatic?: 0
112: 	7 1->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 6->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 10->0 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: c1(O)c2c(cc(O)n1)[nH]cn2
112: Atoms:
112: 	0 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	2 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	7 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 1 conj?: 1 aromatic?: 0
112: 	1 0->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 1 conj?: 1 aromatic?: 0
112: 	6 5->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 3->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 7->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 10->2 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: Oc1c2c(cc(O)n1)[nH]cn2
112: Atoms:
112: 	0 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	3 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	4 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	5 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	7 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	10 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: Bonds:
112: 	0 0->1 order: 1 conj?: 1 aromatic?: 0
112: 	1 1->2 order: 12 conj?: 1 aromatic?: 1
112: 	2 2->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 1 conj?: 1 aromatic?: 0
112: 	6 5->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 3->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 12 conj?: 1 aromatic?: 1
112: 	10 7->1 order: 12 conj?: 1 aromatic?: 1
112: 	11 10->2 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: SMI: n1c(O)cc2[nH]cnc2c1O
112: Atoms:
112: 	0 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	1 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	2 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: 	3 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	4 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	5 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	6 6 C chg: 0  deg: 2 exp: 3 imp: 1 hyb: 3 arom?: 1 chi: 0
112: 	7 7 N chg: 0  deg: 2 exp: 3 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	8 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	9 6 C chg: 0  deg: 3 exp: 4 imp: 0 hyb: 3 arom?: 1 chi: 0
112: 	10 8 O chg: 0  deg: 1 exp: 1 imp: 1 hyb: 3 arom?: 0 chi: 0
112: Bonds:
112: 	0 0->1 order: 12 conj?: 1 aromatic?: 1
112: 	1 1->2 order: 1 conj?: 1 aromatic?: 0
112: 	2 1->3 order: 12 conj?: 1 aromatic?: 1
112: 	3 3->4 order: 12 conj?: 1 aromatic?: 1
112: 	4 4->5 order: 12 conj?: 1 aromatic?: 1
112: 	5 5->6 order: 12 conj?: 1 aromatic?: 1
112: 	6 6->7 order: 12 conj?: 1 aromatic?: 1
112: 	7 7->8 order: 12 conj?: 1 aromatic?: 1
112: 	8 8->9 order: 12 conj?: 1 aromatic?: 1
112: 	9 9->10 order: 1 conj?: 1 aromatic?: 0
112: 	10 9->0 order: 12 conj?: 1 aromatic?: 1
112: 	11 8->4 order: 12 conj?: 1 aromatic?: 1
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: 
112: -------------------
112: 
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Morgan Fingerprints.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Morgan Fingerprints using fromAtoms argument.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Morgan Fingerprints as bit vects.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Morgan Fingerprints with feature invariants.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test additional Morgan fingerprints options.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Atom Codes.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Atom Pairs.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Atom Pairs part 2.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Topological Torsions.
112: [10:16:50]   done
112: [10:16:50] -------------------------------------
112: [10:16:50]     Test Bulk Topological Torsions.
110: .....[10:16:51] 
110: 
110: ****
110: Pre-condition Violation
110: Number of atom props not equal to number of atoms
110: Violation occurred on line 83 in file ./Code/GraphMol/Descriptors/BCUT.cpp
110: Failed Expression: atom_props.size() == num_atoms
110: ****
110: 
110: .........................
110: ----------------------------------------------------------------------
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test Hashed Atom Pairs.
110: Ran 30 tests in 0.391s
110: 
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test Hashed torsions.
110: OK
110: exactmw 78.046950192
110: amw 78.11399999999999
110: lipinskiHBA 0.0
110: lipinskiHBD 0.0
110: NumRotatableBonds 0.0
110: NumHBD 0.0
110: NumHBA 0.0
110: NumHeavyAtoms 6.0
110: NumAtoms 6.0
110: NumHeteroatoms 0.0
110: NumAmideBonds 0.0
110: FractionCSP3 0.0
110: NumRings 1.0
110: NumAromaticRings 1.0
110: NumAliphaticRings 0.0
110: NumSaturatedRings 0.0
110: NumHeterocycles 0.0
110: NumAromaticHeterocycles 0.0
110: NumSaturatedHeterocycles 0.0
110: NumAliphaticHeterocycles 0.0
110: NumSpiroAtoms 0.0
110: NumBridgeheadAtoms 0.0
110: NumAtomStereoCenters 0.0
110: NumUnspecifiedAtomStereoCenters 0.0
110: labuteASA 37.43140311949697
110: tpsa 0.0
110: CrippenClogP 1.6866
110: CrippenMR 26.441999999999993
110: chi0v 3.464101615137755
110: chi1v 2.0000000000000004
110: chi2v 0.6666666666666671
110: chi3v 0.6666666666666671
110: chi4v 0.38490017945975075
110: chi0n 3.464101615137755
110: chi1n 2.0000000000000004
110: chi2n 0.6666666666666671
110: chi3n 0.6666666666666671
110: chi4n 0.38490017945975075
110: hallKierAlpha -0.78
110: kappa1 3.4115708812260532
110: kappa2 1.6057694396735218
110: kappa3 0.5823992601400448
110: Phi 0.9130327103921437
110: exactmw 78.046950192
110: lipinskiHBA 0.0
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test Rooted Atom Pairs.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test ignoring atoms in Atom Pairs.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test Rooted Topological Torsions.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test ignoring atoms in Topological Torsions.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test atom info from morgan fingerprints.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test atom info from morgan fingerprints including Info Redundant Environments.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51] -------------------------------------
112: [10:16:51] -------------------------------------
112: [10:16:51] -------------------------------------
112: [10:16:51] -------------------------------------
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test Atom Pairs including info about chirality.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test Topological Torsions including info about chirality.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test GitHub Issue 25: fingerprint backwards compatibility.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test GitHub Issue 151: PatternFingerprint problems
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test 3D atom pairs.
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test GitHub Issue 195: GenMACCSKeys() raises an exception with an empty molecule
112: [10:16:51]   done
112: [10:16:51] -------------------------------------
112: [10:16:51]     Test multithreading with the pattern FP
112: reading molecules
112: pass 1
112:  launch :0
112:  launch :1
112:  launch :2
112:  launch :3
109/213 Test #110: pyMolDescriptors .......................   Passed    3.71 sec
test 113
        Start 113: testMHFPFingerprint

113: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/testMHFPFingerprint
113: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints
113: Test timeout computed to be: 1500
113: [10:16:52] -------------------------------------
113: [10:16:52] Test MHFP fingerprint encoder initialization
113: [10:16:52]   done
113: [10:16:52] -------------------------------------
113: [10:16:52] Test MHFP shingling creation
113: [10:16:52]   done
113: [10:16:52] -------------------------------------
113: [10:16:52] Test MHFP hashing of string and uint arrays
113: [10:16:52]   done
113: [10:16:52] -------------------------------------
113: [10:16:52] Test SECFP fingerprint functionality
113: [10:16:52]   done
110/213 Test #113: testMHFPFingerprint ....................   Passed    0.80 sec
test 114
        Start 114: testFingerprintGenerators

114: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/testFingerprintGenerators
114: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints
114: Test timeout computed to be: 1500
114: [10:16:53] -------------------------------------
114: [10:16:53] Test atom-pair fp generator
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test atom-pair fp generator with different arguments
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test compatibility between atom pair implementation for FingerprintGenerator and old atom pairs implementation
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test atom-pair additional output
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Folded Atom Pairs.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Rooted Atom Pairs.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test ignoring atoms in Atom Pairs.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Atom Pairs including info about chirality.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Morgan Fingerprints.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test morgan fp generator
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Morgan Fingerprints using fromAtoms argument.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Morgan Fingerprints as bit vects.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test Morgan Fingerprints with feature invariants.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test additional Morgan fingerprints options.
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Test GitHub Issue 695: Include cis/trans stereochemistry when useChirality=true with the morgan fingerprints
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53]     Single atoms setting radius 1 bits in Morgan fingerprints  
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test different invariant generator combinations
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test invariant overriding
114: [10:16:53]   done
114: [10:16:53] -------------------------------------
114: [10:16:53] Test RDKit fp generator
112: pass 2
112:  launch :0
112:  launch :1
112:  launch :2
112:  launch :3
111: ........
111: ----------------------------------------------------------------------
111: Ran 8 tests in 2.672s
111: 
111: OK
111/213 Test #111: pyMolDescriptors3D .....................   Passed    5.32 sec
test 115
        Start 115: fpTestCatch

115: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/fpTestCatch
115: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints
115: Test timeout computed to be: 1500
115: 
115: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
115: fpTestCatch is a Catch v2.13.10 host application.
115: Run with -? for options
115: 
115: -------------------------------------------------------------------------------
115: TopologicalTorsionGenerator bit info
115:   unfolded bitInfo
115: -------------------------------------------------------------------------------
115: ./Code/GraphMol/Fingerprints/catch_tests.cpp:473
115: ...............................................................................
115: 
115: ./Code/GraphMol/Fingerprints/catch_tests.cpp:500: FAILED:
115:   CHECK( *ao.bitPaths == expected )
115: with expansion:
115:   { {?}, {?} } == { {?}, {?} }
115: 
115: -------------------------------------------------------------------------------
115: TopologicalTorsionGenerator bit info
115:   unfolded atomToBits atomCounts
115: -------------------------------------------------------------------------------
115: ./Code/GraphMol/Fingerprints/catch_tests.cpp:504
115: ...............................................................................
115: 
115: ./Code/GraphMol/Fingerprints/catch_tests.cpp:533: FAILED:
115:   CHECK( *ao.atomToBits == expected1 )
115: with expansion:
115:   { { 142622752 (0x8804020) }, { 142622752 (0x8804020), 8405025 (0x804021) }, {
115:   142622752 (0x8804020), 8405025 (0x804021) }, { 142622752 (0x8804020), 8405025
115:   (0x804021) }, { 8405025 (0x804021) } }
115:   ==
115:   { { 4437590048 (0x108804020) }, { 4437590048 (0x108804020), 30073176097
115:   (0x700804021) }, { 4437590048 (0x108804020), 30073176097 (0x700804021) }, {
115:   4437590048 (0x108804020), 30073176097 (0x700804021) }, { 30073176097
115:   (0x700804021) } }
115: 
115: ===============================================================================
115: test cases:  14 |  13 passed | 1 failed
115: assertions: 166 | 164 passed | 2 failed
115: 
112/213 Test #115: fpTestCatch ............................***Failed    0.45 sec

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
fpTestCatch is a Catch v2.13.10 host application.
Run with -? for options

-------------------------------------------------------------------------------
TopologicalTorsionGenerator bit info
  unfolded bitInfo
-------------------------------------------------------------------------------
./Code/GraphMol/Fingerprints/catch_tests.cpp:473
...............................................................................

./Code/GraphMol/Fingerprints/catch_tests.cpp:500: FAILED:
  CHECK( *ao.bitPaths == expected )
with expansion:
  { {?}, {?} } == { {?}, {?} }

-------------------------------------------------------------------------------
TopologicalTorsionGenerator bit info
  unfolded atomToBits atomCounts
-------------------------------------------------------------------------------
./Code/GraphMol/Fingerprints/catch_tests.cpp:504
...............................................................................

./Code/GraphMol/Fingerprints/catch_tests.cpp:533: FAILED:
  CHECK( *ao.atomToBits == expected1 )
with expansion:
  { { 142622752 (0x8804020) }, { 142622752 (0x8804020), 8405025 (0x804021) }, {
  142622752 (0x8804020), 8405025 (0x804021) }, { 142622752 (0x8804020), 8405025
  (0x804021) }, { 8405025 (0x804021) } }
  ==
  { { 4437590048 (0x108804020) }, { 4437590048 (0x108804020), 30073176097
  (0x700804021) }, { 4437590048 (0x108804020), 30073176097 (0x700804021) }, {
  4437590048 (0x108804020), 30073176097 (0x700804021) }, { 30073176097
  (0x700804021) } }

===============================================================================
test cases:  14 |  13 passed | 1 failed
assertions: 166 | 164 passed | 2 failed


test 116
        Start 116: fpGenTestCatch

116: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/fpGenTestCatch
116: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints
116: Test timeout computed to be: 1500
116: ===============================================================================
116: All tests passed (78 assertions in 3 test cases)
116: 
113/213 Test #116: fpGenTestCatch .........................   Passed    0.48 sec
test 117
        Start 117: pyTestGenerator

117: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/testGenerators.py"
117: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap
117: Test timeout computed to be: 1500
114: [10:16:57]   done
114: [10:16:57] -------------------------------------
114: [10:16:57]     Test unfolded version of RDKFP   
114: [10:16:57] -------------------------------------
114: [10:16:57] Test topological torsion fp generator
114: [10:16:57]   done
114: [10:16:57] -------------------------------------
114: [10:16:57]     Test Topological Torsions.
114: [10:16:57]   done
114: [10:16:57] -------------------------------------
114: [10:16:57]     Test Folded torsions.
114: [10:16:57]   done
114: [10:16:57] -------------------------------------
114: [10:16:57]     Test Bulk Topological Torsions.
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test Rooted Topological Torsions.
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test ignoring atoms in Topological Torsions.
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test Topological Torsions including info about chirality.
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test GitHub Issue 25: fingerprint backwards compatibility.
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test GitHub Issue 334: explicit Hs in SMILES modifies atom pair (and topological torsion) FP.
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test GitHub Issue 811: rooted atom fingerprint non identical for the same molecules #811
114: [10:16:58] Warning: molecule is tagged as 3D, but all Z coords are zero
114: [10:16:58]   done
114: [10:16:58] -------------------------------------
114: [10:16:58]     Test convenience and bulk fp calculation functions
117: ............
117: ----------------------------------------------------------------------
117: Ran 12 tests in 0.464s
117: 
117: OK
114/213 Test #117: pyTestGenerator ........................   Passed    3.99 sec
test 118
        Start 118: pyTestMHFP

118: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/testMHFP.py"
118: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap
118: Test timeout computed to be: 1500
114: [10:17:02]   done
115/213 Test #114: testFingerprintGenerators ..............   Passed    9.81 sec
test 119
        Start 119: testPartialCharges

119: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/testPartialCharges
119: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges
119: Test timeout computed to be: 1500
116/213 Test #119: testPartialCharges .....................   Passed    0.28 sec
test 120
        Start 120: pyPartialCharges

120: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap/testPartialCharges.py"
120: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap
120: Test timeout computed to be: 1500
118: ..
118: ----------------------------------------------------------------------
118: Ran 2 tests in 0.495s
118: 
118: OK
117/213 Test #118: pyTestMHFP .............................   Passed    3.31 sec
test 121
        Start 121: testMolTransforms

121: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/testMolTransforms
121: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms
121: Test timeout computed to be: 1500
121: ***********************************************************
121: Testing MolTransforms
121: 	---------------------------------
121: 	 test1Canonicalization 
121: 
121: 	---------------------------------
121: 	 testGetSetBondLength 
121: 
121: 	---------------------------------
121: 	 testGetSetAngle 
121: 
121: 	---------------------------------
121: 	 testGetSetDihedral 
121: 
121: 	---------------------------------
121: 	 testGetSetDihedralThroughTripleBond 
121: 
121: 	---------------------------------
121: 	 testGithub1262: PMI descriptors incorrect  
121: 
121: 	---------------------------------
121: 	 testGithub1908: CanonicalizeMol() distorting bond lengths
121: 
121: 	---------------------------------
121: 	 testGithub4302: native computeCanonicalTransform() generates non-canonical coords
121: 
121: 	---------------------------------
121: 	 testWeightedCentroid 
121: 
121: ***********************************************************
118/213 Test #121: testMolTransforms ......................   Passed    0.52 sec
test 122
        Start 122: pyMolTransforms

122: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap/testMolTransforms.py"
122: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap
122: Test timeout computed to be: 1500
120: .......
120: ----------------------------------------------------------------------
120: Ran 7 tests in 1.834s
120: 
120: OK
119/213 Test #120: pyPartialCharges .......................   Passed    4.56 sec
test 123
        Start 123: testMMFFForceFieldHelpers

123: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFForceFieldHelpers
123: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF
123: Test timeout computed to be: 1500
122: ........
122: ----------------------------------------------------------------------
122: Ran 8 tests in 0.452s
122: 
122: OK
123: [10:17:07] -------------------------------------
123: [10:17:07]     Test MMFF atom types.
120/213 Test #122: pyMolTransforms ........................   Passed    3.71 sec
test 124
        Start 124: testMMFFForceFieldHelpersMultiThread

124: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFForceFieldHelpersMultiThread
124: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF
124: Test timeout computed to be: 1500
123: [10:17:07]   done
123: [10:17:07] -------------------------------------
123: [10:17:07]     Testing MMFF builder tools.
124: [10:17:08] -------------------------------------
124: [10:17:08]     Test MMFF multithreading
123: [10:17:08]   done
123: [10:17:08] -------------------------------------
123: [10:17:08]     Testing MMFF builder+minimization.
124: processing
124:  launch :0
124:  launch :1
124:  launch :2
124:  launch :3
124:  launch :4
124:  launch :5
124:  launch :6
124:  launch :7
124:  launch :8
124:  launch :9
124:  launch :10
124:  launch :11
124:  launch :12
124:  launch :13
124:  launch :14
124:  launch :15
124:  launch :16
124:  launch :17
124:  launch :18
124:  launch :19
124:  launch :20
124:  launch :21
124:  launch :22
124:  launch :23
123: [10:17:10]   done
123: [10:17:10] -------------------------------------
123: [10:17:10]     Testing Issue239.
123: [10:17:11]   done
123: [10:17:11] -------------------------------------
123: [10:17:11]     Testing calcEnergy with passed coords.
124: done
123: [10:17:11]   done
123: [10:17:11] -------------------------------------
123: [10:17:11]     Testing calcGrad.
124: [10:17:11]   done
121/213 Test #124: testMMFFForceFieldHelpersMultiThread ...   Passed    3.76 sec
test 125
        Start 125: testUFFForceFieldHelpers

125: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/testUFFForceFieldHelpers
125: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF
125: Test timeout computed to be: 1500
123: [10:17:11]   done
123: [10:17:11] -------------------------------------
123: [10:17:11]     Testing Issue242.
125: [10:17:11] -------------------------------------
125: [10:17:11]     Test UFF atom labels.
125: [10:17:12]   done
125: [10:17:12] -------------------------------------
125: [10:17:12]     Test UFF atom typer.
125: [10:17:12]   done
125: [10:17:12] -------------------------------------
125: [10:17:12]     Testing UFF builder tools.
125: [10:17:12]   done
125: [10:17:12] -------------------------------------
125: [10:17:12]     Testing UFF builder+minimization.
123: [10:17:12]   done
123: [10:17:12] -------------------------------------
123: [10:17:12]     Testing github 308: crash during MMFF parameterization .
123: [10:17:12] -------------------------------------
123: [10:17:12]     Testing SFIssue1653802.
123: [10:17:12]   done
123: [10:17:12] -------------------------------------
123: [10:17:12]     Testing SFIssue2378119.
123: [10:17:12]   done
123: [10:17:12] -------------------------------------
123: [10:17:12]     Test MMFF force-field parameter getters.
123: [10:17:12] -------------------------------------
123: [10:17:12]     Test MMFF multithreading
123: generating reference data
125: [10:17:13]   done
125: [10:17:13] -------------------------------------
125: [10:17:13]     Testing UFF special cases.
125: [10:17:13] UFFTYPER: Unrecognized charge state for atom: 0
125: [10:17:13]   done
125: [10:17:13] -------------------------------------
125: [10:17:13]     Testing Issue239.
125: [10:17:13]   done
125: [10:17:13] -------------------------------------
125: [10:17:13]     Testing calcEnergy with passed coords.
125: [10:17:13]   done
125: [10:17:13] -------------------------------------
125: [10:17:13]     Testing calcGrad.
125: [10:17:14]   done
125: [10:17:14] -------------------------------------
125: [10:17:14]     Testing SFIssue1653802.
125: [10:17:14]   done
125: [10:17:14] -------------------------------------
125: [10:17:14]     Testing SFIssue2378119.
125: [10:17:14]   done
125: [10:17:14] -------------------------------------
125: [10:17:14]     Test UFF force-field parameter getters.
125: [10:17:14] -------------------------------------
125: [10:17:14]     Testing handling missing parameters.
125: [10:17:14] UFFTYPER: Unrecognized hybridization for atom: 0
125: [10:17:14] UFFTYPER: Unrecognized atom type: Cu+1 (0)
125: [10:17:14] UFFTYPER: Unrecognized hybridization for atom: 0
125: [10:17:14] UFFTYPER: Unrecognized atom type: Cu+1 (0)
125: [10:17:14]   done
125: [10:17:14] -------------------------------------
125: [10:17:14]     Testing SFIssue3009337.
125: [10:17:14]   done
125: [10:17:14] -------------------------------------
125: [10:17:14]     Test UFF multithreading
125: generating reference data
125: processing
125:  launch :0
125:  launch :1
125:  launch :2
125:  launch :3
125: [10:17:18] Rep: 0 Mol:0
125: [10:17:18] Rep: 0 Mol:1
125: [10:17:18] Rep: 0 Mol:2
125: [10:17:18] Rep: 0 Mol:3
125: [10:17:18] Rep: 0 Mol:5
125: [10:17:18] Rep: 0 Mol:9
125: [10:17:18] Rep: 0 Mol:4
125: [10:17:18] Rep: 0 Mol:13
125: [10:17:19] Rep: 0 Mol:17
125: [10:17:19] Rep: 0 Mol:7
125: [10:17:19] Rep: 0 Mol:6
125: [10:17:19] Rep: 0 Mol:11
125: [10:17:19] Rep: 0 Mol:10
125: [10:17:19] Rep: 0 Mol:15
125: [10:17:19] Rep: 0 Mol:19
125: [10:17:19] Rep: 0 Mol:8
125: [10:17:19] Rep: 0 Mol:23
125: [10:17:19] Rep: 0 Mol:27
125: [10:17:19] Rep: 0 Mol:12
125: [10:17:19] Rep: 0 Mol:16
125: [10:17:19] Rep: 0 Mol:31
125: [10:17:19] Rep: 0 Mol:20
125: [10:17:19] Rep: 0 Mol:21
125: [10:17:19] Rep: 0 Mol:14
125: [10:17:19] Rep: 0 Mol:25
125: [10:17:19] Rep: 0 Mol:24
125: [10:17:20] Rep: 0 Mol:28
125: [10:17:20] Rep: 0 Mol:18
125: [10:17:20] Rep: 0 Mol:29
123: processing
123:  launch :0
123:  launch :1
123:  launch :2
123:  launch :3
123: [10:17:20] Rep: 0 Mol:2
123: [10:17:20] Rep: 0 Mol:1
123: [10:17:20] Rep: 0 Mol:0
123: [10:17:20] Rep: 0 Mol:3
125: [10:17:20] Rep: 0 Mol:22
123: [10:17:20] Rep: 0 Mol:5
123: [10:17:20] Rep: 0 Mol:9
125: [10:17:20] Rep: 0 Mol:26
123: [10:17:20] Rep: 0 Mol:4
123: [10:17:20] Rep: 0 Mol:13
125: [10:17:20] Rep: 0 Mol:30
123: [10:17:20] Rep: 0 Mol:17
123: [10:17:20] Rep: 0 Mol:6
123: [10:17:20] Rep: 0 Mol:8
123: [10:17:21] Rep: 0 Mol:10
123: [10:17:21] Rep: 0 Mol:12
123: [10:17:21] Rep: 0 Mol:16
123: [10:17:21] Rep: 0 Mol:7
123: [10:17:21] Rep: 0 Mol:11
123: [10:17:21] Rep: 0 Mol:20
123: [10:17:21] Rep: 0 Mol:21
123: [10:17:21] Rep: 0 Mol:15
123: [10:17:21] Rep: 0 Mol:19
123: [10:17:21] Rep: 0 Mol:25
123: [10:17:21] Rep: 0 Mol:24
123: [10:17:22] Rep: 0 Mol:23
123: [10:17:22] Rep: 0 Mol:27
123: [10:17:22] Rep: 0 Mol:28
123: [10:17:22] Rep: 0 Mol:31
123: [10:17:22] Rep: 0 Mol:29
123: [10:17:22] Rep: 0 Mol:14
123: [10:17:22] Rep: 0 Mol:18
123: [10:17:23] Rep: 0 Mol:22
123: [10:17:23] Rep: 0 Mol:26
123: [10:17:24] Rep: 0 Mol:30
123: [10:17:25] Rep: 20 Mol:3
123: [10:17:25] Rep: 20 Mol:7
123: [10:17:25] Rep: 20 Mol:11
123: [10:17:25] Rep: 20 Mol:15
123: [10:17:25] Rep: 20 Mol:19
123: [10:17:25] Rep: 20 Mol:23
123: [10:17:25] Rep: 20 Mol:27
123: [10:17:25] Rep: 20 Mol:31
123: [10:17:25] Rep: 20 Mol:0
123: [10:17:25] Rep: 20 Mol:4
123: [10:17:25] Rep: 20 Mol:8
123: [10:17:25] Rep: 20 Mol:12
123: [10:17:25] Rep: 20 Mol:16
123: [10:17:25] Rep: 20 Mol:20
123: [10:17:25] Rep: 20 Mol:24
123: [10:17:25] Rep: 20 Mol:28
123: [10:17:25] Rep: 20 Mol:1
123: [10:17:25] Rep: 20 Mol:5
123: [10:17:25] Rep: 20 Mol:9
123: [10:17:26] Rep: 20 Mol:13
123: [10:17:26] Rep: 20 Mol:17
123: [10:17:26] Rep: 20 Mol:21
123: [10:17:26] Rep: 20 Mol:25
123: [10:17:26] Rep: 20 Mol:29
125: [10:17:27] Rep: 100 Mol:3
125: [10:17:27] Rep: 100 Mol:7
125: [10:17:27] Rep: 100 Mol:11
125: [10:17:27] Rep: 100 Mol:15
125: [10:17:27] Rep: 100 Mol:19
125: [10:17:27] Rep: 100 Mol:23
125: [10:17:27] Rep: 100 Mol:27
125: [10:17:27] Rep: 100 Mol:31
123: [10:17:27] Rep: 40 Mol:3
123: [10:17:27] Rep: 40 Mol:7
123: [10:17:27] Rep: 40 Mol:11
123: [10:17:27] Rep: 40 Mol:15
123: [10:17:27] Rep: 40 Mol:19
123: [10:17:27] Rep: 40 Mol:23
123: [10:17:28] Rep: 40 Mol:27
123: [10:17:28] Rep: 40 Mol:31
123: [10:17:28] Rep: 40 Mol:0
125: [10:17:28] Rep: 100 Mol:0
123: [10:17:28] Rep: 40 Mol:4
125: [10:17:28] Rep: 100 Mol:4
125: [10:17:28] Rep: 100 Mol:8
125: [10:17:28] Rep: 100 Mol:12
125: [10:17:28] Rep: 100 Mol:16
123: [10:17:28] Rep: 40 Mol:8
125: [10:17:28] Rep: 100 Mol:20
125: [10:17:28] Rep: 100 Mol:24
125: [10:17:28] Rep: 100 Mol:28
123: [10:17:29] Rep: 40 Mol:12
123: [10:17:29] Rep: 40 Mol:16
123: [10:17:29] Rep: 40 Mol:20
123: [10:17:29] Rep: 40 Mol:24
123: [10:17:29] Rep: 40 Mol:1
123: [10:17:29] Rep: 40 Mol:5
123: [10:17:29] Rep: 40 Mol:28
123: [10:17:29] Rep: 40 Mol:9
123: [10:17:29] Rep: 40 Mol:13
123: [10:17:29] Rep: 40 Mol:17
123: [10:17:29] Rep: 40 Mol:21
123: [10:17:29] Rep: 40 Mol:25
123: [10:17:29] Rep: 40 Mol:29
125: [10:17:29] Rep: 100 Mol:1
125: [10:17:29] Rep: 100 Mol:5
125: [10:17:29] Rep: 100 Mol:9
125: [10:17:29] Rep: 100 Mol:13
123: [10:17:29] Rep: 20 Mol:2
125: [10:17:29] Rep: 100 Mol:17
125: [10:17:29] Rep: 100 Mol:21
125: [10:17:29] Rep: 100 Mol:25
123: [10:17:29] Rep: 20 Mol:6
125: [10:17:29] Rep: 100 Mol:29
123: [10:17:29] Rep: 20 Mol:10
123: [10:17:29] Rep: 20 Mol:14
123: [10:17:29] Rep: 20 Mol:18
123: [10:17:29] Rep: 20 Mol:22
123: [10:17:29] Rep: 20 Mol:26
123: [10:17:29] Rep: 20 Mol:30
123: [10:17:30] Rep: 60 Mol:3
123: [10:17:30] Rep: 60 Mol:7
123: [10:17:30] Rep: 60 Mol:11
123: [10:17:30] Rep: 60 Mol:15
123: [10:17:30] Rep: 60 Mol:19
123: [10:17:30] Rep: 60 Mol:23
123: [10:17:30] Rep: 60 Mol:27
123: [10:17:30] Rep: 60 Mol:31
123: [10:17:32] Rep: 60 Mol:0
123: [10:17:32] Rep: 60 Mol:4
123: [10:17:32] Rep: 60 Mol:8
123: [10:17:32] Rep: 60 Mol:12
123: [10:17:32] Rep: 60 Mol:16
123: [10:17:32] Rep: 60 Mol:20
123: [10:17:32] Rep: 60 Mol:24
123: [10:17:32] Rep: 60 Mol:28
123: [10:17:32] Rep: 60 Mol:1
123: [10:17:32] Rep: 60 Mol:5
123: [10:17:32] Rep: 60 Mol:9
123: [10:17:32] Rep: 60 Mol:13
123: [10:17:32] Rep: 60 Mol:17
123: [10:17:32] Rep: 60 Mol:21
123: [10:17:32] Rep: 60 Mol:25
123: [10:17:32] Rep: 60 Mol:29
123: [10:17:32] Rep: 80 Mol:3
123: [10:17:32] Rep: 80 Mol:7
123: [10:17:33] Rep: 80 Mol:11
123: [10:17:33] Rep: 80 Mol:15
123: [10:17:33] Rep: 80 Mol:19
123: [10:17:33] Rep: 80 Mol:23
123: [10:17:33] Rep: 80 Mol:27
123: [10:17:33] Rep: 80 Mol:31
125: [10:17:33] Rep: 100 Mol:2
125: [10:17:33] Rep: 100 Mol:6
125: [10:17:33] Rep: 100 Mol:10
125: [10:17:33] Rep: 100 Mol:14
125: [10:17:33] Rep: 100 Mol:18
125: [10:17:33] Rep: 100 Mol:22
125: [10:17:33] Rep: 100 Mol:26
125: [10:17:33] Rep: 100 Mol:30
123: [10:17:33] Rep: 40 Mol:2
123: [10:17:33] Rep: 40 Mol:6
123: [10:17:33] Rep: 40 Mol:10
123: [10:17:33] Rep: 40 Mol:14
123: [10:17:33] Rep: 40 Mol:18
123: [10:17:33] Rep: 40 Mol:22
123: [10:17:33] Rep: 40 Mol:26
123: [10:17:33] Rep: 40 Mol:30
123: [10:17:35] Rep: 80 Mol:0
123: [10:17:35] Rep: 80 Mol:4
123: [10:17:35] Rep: 80 Mol:8
123: [10:17:35] Rep: 80 Mol:12
123: [10:17:35] Rep: 80 Mol:16
123: [10:17:35] Rep: 80 Mol:20
123: [10:17:35] Rep: 80 Mol:24
123: [10:17:35] Rep: 80 Mol:28
123: [10:17:36] Rep: 80 Mol:1
123: [10:17:36] Rep: 80 Mol:5
123: [10:17:36] Rep: 80 Mol:9
123: [10:17:36] Rep: 80 Mol:13
123: [10:17:36] Rep: 80 Mol:17
123: [10:17:36] Rep: 80 Mol:21
123: [10:17:36] Rep: 80 Mol:25
123: [10:17:36] Rep: 80 Mol:29
123: [10:17:37] Rep: 60 Mol:2
123: [10:17:37] Rep: 60 Mol:6
123: [10:17:37] Rep: 60 Mol:10
123: [10:17:37] Rep: 60 Mol:14
123: [10:17:37] Rep: 60 Mol:18
123: [10:17:37] Rep: 60 Mol:22
123: [10:17:37] Rep: 60 Mol:26
123: [10:17:37] Rep: 60 Mol:30
123: [10:17:39] Rep: 80 Mol:2
123: [10:17:39] Rep: 80 Mol:6
123: [10:17:39] Rep: 80 Mol:10
123: [10:17:39] Rep: 80 Mol:14
123: [10:17:39] Rep: 80 Mol:18
123: [10:17:39] Rep: 80 Mol:22
123: [10:17:39] Rep: 80 Mol:26
123: [10:17:39] Rep: 80 Mol:30
125: [10:17:39]   done
125: [10:17:39] -------------------------------------
125: [10:17:39]     Test UFF multithreading2
123: [10:17:41]   done
123: [10:17:41] -------------------------------------
123: [10:17:41]     Test MMFF multithreading2
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42]     Test GitHub Issue 258: Bad pattern fingerprint for query molecule
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42]     Test GitHub Issue 334: explicit Hs in SMILES modifies atom pair (and topological torsion) FP.
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42]     Test GitHub Issue 695: Include cis/trans stereochemistry when useChirality=true with the morgan fingerprints
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42]     Test GitHub Issue 811: rooted atom fingerprint non identical for the same molecules #811
112: [10:17:42] Warning: molecule is tagged as 3D, but all Z coords are zero
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42]     Test unfolded version of RDKFP   
112: [10:17:42] -------------------------------------
112: [10:17:42]     Test bitinfo of RDKFP   
112:    562:  [ 2 ], 
112:    709:  [ 0 1 ], 
112:    1118:  [ 0 1 2 ], 
112:    1183:  [ 1 2 ], 
112:    1233:  [ 0 1 2 ], 
112:    1308:  [ 0 ],  [ 1 ], 
112:    1339:  [ 2 ], 
112:    1728:  [ 1 2 ], 
112:    1772:  [ 0 ],  [ 1 ], 
112:    1813:  [ 0 1 ], 
112:   ------------ 
112: [10:17:42] -------------------------------------
112: [10:17:42]     Single atoms setting radius 1 bits in Morgan fingerprints  
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42] Github #879: Pattern fingerprint should set bits for single-atom fragments.
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42] Github #1496: Pattern fingerprint setting bad bits for degree zero atoms
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42] Github #1793: Fingerprint segfaults with branchedPaths=False and useHs=False
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42] Github #1993: fingerprinters that use R/S labels should force a call to assignStereochemistry() if it hasn't already been called
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42] Github #2115: BitInfo not complete for RDKFingerprint
112: [10:17:42]   done
112: [10:17:42] -------------------------------------
112: [10:17:42] Github #3723: Fingerprint crash for mols with Zero order bonds
112: [10:17:42]   done
122/213 Test #112: testFingerprints .......................   Passed   52.67 sec
test 126
        Start 126: testCrystalForceField

126: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalForceField
126: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF
126: Test timeout computed to be: 1500
126: -------------------------------------
126:  Test CrystalFF torsional term.
123/213 Test #126: testCrystalForceField ..................   Passed    2.78 sec
test 127
        Start 127: pyForceFieldHelpers

127: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap/testHelpers.py"
127: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap
127: Test timeout computed to be: 1500
127: [10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: ..[10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:50] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:51] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:51] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:52] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:53] UFFTYPER: Unrecognized hybridization for atom: 0
127: [10:17:53] UFFTYPER: Unrecognized atom type: Cu+1 (0)
127: .[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: .[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: ..[10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: [10:17:53] Molecule does not have explicit Hs. Consider calling AddHs()
127: ...
127: ----------------------------------------------------------------------
127: Ran 18 tests in 3.786s
127: 
127: OK
124/213 Test #127: pyForceFieldHelpers ....................   Passed    9.01 sec
test 128
        Start 128: testDistGeomHelpers

128: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/testDistGeomHelpers
128: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers
128: Test timeout computed to be: 1500
128: go
128: -------------------------------------
128: 
123: [10:18:03]   done
123: [10:18:03] -------------------------------------
123: [10:18:03]     Test MMFF multithreading3
125: [10:18:05]   done
125: [10:18:05] -------------------------------------
125: [10:18:05]     Test UFF multithreading3
123: [10:18:26]   done
123: [10:18:26] -------------------------------------
123: [10:18:26]     Testing github 162: Incorrect SMILES after MMFF parameterization .
123: [10:18:26]   done
123: [10:18:26] -------------------------------------
123: [10:18:26]     Testing github 224: crash during MMFF parameterization .
123: [10:18:26]   done
125/213 Test #123: testMMFFForceFieldHelpers ..............   Passed   78.88 sec
test 129
        Start 129: distGeomHelpersCatch

129: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/distGeomHelpersCatch
129: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers
129: Test timeout computed to be: 1500
129: [10:18:27] [C:1][NH:2]!@;-[C:3](=[NH2:4])[NH2]: 100 101 102 104, [(1 0), (-1 100), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH2][C:1](=[NH2])[NH:2]!@;-[CH2:3][C:4]: 102 101 100 99, [(1 0), (1 0), (1 2.5), (1 0), (1 0), (1 0)] 
129: [10:18:27] [OX2:1][CX4:2]!@;-[CX4:3][N:4]: 32 31 30 33, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [OX2:1][CX4:2]!@;-[CX4:3][N:4]: 48 46 45 49, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4H2:2]!@;-[CX4H2:3][!#1:4]: 36 37 38 39, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4H2:2]!@;-[CX4H2:3][!#1:4]: 37 38 39 40, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4H2:2]!@;-[CX4H2:3][!#1:4]: 38 39 40 41, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4H2:2]!@;-[CX4H2:3][!#1:4]: 97 98 99 100, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4H2:2]!@;-[CX4H2:3][!#1:4]: 98 99 100 101, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 0 1 2 3, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 1 2 4 5, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 20 22 23 24, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 22 23 25 26, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 34 36 37 38, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 66 67 68 69, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 84 85 86 87, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4:2]!@;-[CX4:3][!#1:4]: 96 97 98 99, [(1 0), (1 0), (1 7), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4H2:2]!@;-[CX3:3]=[O:4]: 85 86 87 88, [(1 -1), (1 -0.5), (1 -0.2), (1 -0.3), (1 0), (1 -0.3)] 
129: [10:18:27] [cH1:1][c:2]([cH1])!@;-[CX4H2:3][CX4:4]: 70 69 68 67, [(1 0), (1 3.6), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [*:1][X3,X2:2]=[X3,X2:3][*:4]: 101 102 104 220, [(1 0), (-1 100), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H0;r:3][CX4H1:4]: 15 13 12 8, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H0;r:3][CX4H1:4]: 22 20 19 15, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H0;r:3][CX4H1:4]: 67 75 77 81, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 4 62 61 60, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 8 6 5 4, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 30 28 27 22, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 36 34 33 30, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 45 43 42 36, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 81 82 84 85, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 93 94 96 97, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 97 105 107 52, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$([CX3]=O):1][NX3H1;r{9-}:2]@;-[CX4H2;r{9-}:3][C:4]: 90 92 93 94, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 6 5 4 117, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 28 27 22 133, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 34 33 30 144, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 43 42 36 149, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 62 61 60 181, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 82 84 85 202, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 94 96 97 210, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 105 107 52 171, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [O:1]=[CX3;r{9-}:2]@;-[NX3H1;r{9-}:3][!#1:4]: 91 90 92 93, [(-1 100), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4;r{9-}:2]@;-[NX3;r{9-}:3][C:4]: 43 45 49 50, [(1 0), (1 0), (1 1), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4;r{9-}:2]@;-[NX3;r{9-}:3][C:4]: 52 50 49 45, [(1 0), (1 0), (1 1), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4;r{9-}:2]@;-[NX3;r{9-}:3][C:4]: 60 64 66 67, [(1 0), (1 0), (1 1), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4;r{9-}:2]@;-[NX3;r{9-}:3][C:4]: 68 67 66 64, [(1 0), (1 0), (1 1), (1 0), (1 0), (1 0)] 
129: [10:18:27] N[C;r{9-}:2](=[O:1])@;-[CH2;r{9-}:3][N:4]: 95 94 93 92, [(1 0), (-1 10), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [OX2:1][CX4;r{9-}:2]@;-[CX4;r{9-}:3][N:4]: 51 50 52 107, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [OX2:1][CX4;r{9-}:2]@;-[CX4;r{9-}:3][N:4]: 65 64 60 61, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4&r;r{9-}:2]@;-[CX4&r;r{9-}:3][!#1:4]: 50 52 53 54, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4&r;r{9-}:2]@;-[CX4&r;r{9-}:3][!#1:4]: 58 59 60 61, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 5 4 62 63, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 27 22 20 21, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 33 30 28 29, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 42 36 34 35, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 49 45 43 44, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 66 67 75 76, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 84 85 90 91, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [NH1:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 96 97 105 106, [(1 0), (-1 3), (1 0), (1 0), (1 0), (1 0)] 
129: -----------
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 2 1 10 9, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 14 12 11 9, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$([CX3]=O):1][NX3H1;r{9-}:2]@;-[CX4H2;r{9-}:3][C:4]: 4 3 2 1, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$([CX3]=O):1][NX3H1;r{9-}:2]@;-[CX4H2;r{9-}:3][C:4]: 16 15 14 12, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 1 10 9 26, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 12 11 9 26, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [O:1]=[CX3;r{9-}:2]@;-[NX3H1;r{9-}:3][!#1:4]: 5 4 3 2, [(-1 100), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [O:1]=[CX3;r{9-}:2]@;-[NX3H1;r{9-}:3][!#1:4]: 17 16 15 14, [(-1 100), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] N[C;r{9-}:2](=[O:1])@;-[CH2;r{9-}:3][N:4]: 0 1 2 3, [(1 0), (-1 10), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] N[C;r{9-}:2](=[O:1])@;-[CH2;r{9-}:3][N:4]: 13 12 14 15, [(1 0), (-1 10), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4&r;r{9-}:2]@;-[CX4&r;r{9-}:3][!#1:4]: 4 6 7 8, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4&r;r{9-}:2]@;-[CX4&r;r{9-}:3][!#1:4]: 6 7 8 9, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:27] [!#1:1][CX4&r;r{9-}:2]@;-[CX4&r;r{9-}:3][!#1:4]: 7 8 9 10, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 4 6 16 17, [(1 0), (1 0), (-1 1), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][CX4;r{9-}:2]@;-[CX3;r{9-}:3]=[O:4]: 7 6 4 5, [(1 0), (1 0), (-1 1), (1 0), (1 0), (1 0)] 
129: -----------
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 13 14 16 3, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$([CX3]=O):1][NX3H1;r{9-}:2]@;-[CX4H2;r{9-}:3][C:4]: 10 12 13 14, [(1 0), (1 0), (1 4), (1 0), (1 0), (1 0)] 
129: [10:18:27] [O:1]=[CX3;r{9-}:2]@;-[NX3H1;r{9-}:3][!#1:4]: 11 10 12 13, [(-1 100), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] N[C;r{9-}:2](=[O:1])@;-[CH2;r{9-}:3][N:4]: 15 14 13 12, [(1 0), (-1 10), (1 0), (1 0), (1 0), (1 0)] 
129: -----------
129: -----------
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 2 1 15 14, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 2 3 5 6, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 10 8 7 6, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 10 11 13 14, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 19 17 16 14, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [C:1][C;r{9-}:2](=O)@;-[NX3H1;r:3][CX4H1:4]: 19 20 22 6, [(1 0), (-1 8), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 1 15 14 31, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 3 5 6 26, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 8 7 6 26, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 11 13 14 31, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 17 16 14 31, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:27] [$(C=O):1][NX3H1;r{9-}:2]@;-[CX4H1;r{9-}:3][H:4]: 20 22 6 26, [(-1 5), (1 0), (1 0), (1 0), (1 0), (1 0)] 
129: [10:18:28] [O:1]=[CX3;r{9-}:2]([NH1])@;-[CH2;r{9-}:3][CX3:4]=O: 0 1 2 3, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:28] [O:1]=[CX3;r{9-}:2]([NH1])@;-[CH2;r{9-}:3][CX3:4]=O: 4 3 2 1, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:28] [O:1]=[CX3;r{9-}:2]([NH1])@;-[CH2;r{9-}:3][CX3:4]=O: 9 8 10 11, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:28] [O:1]=[CX3;r{9-}:2]([NH1])@;-[CH2;r{9-}:3][CX3:4]=O: 12 11 10 8, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:28] [O:1]=[CX3;r{9-}:2]([NH1])@;-[CH2;r{9-}:3][CX3:4]=O: 18 17 19 20, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:28] [O:1]=[CX3;r{9-}:2]([NH1])@;-[CH2;r{9-}:3][CX3:4]=O: 21 20 19 17, [(1 0), (1 0), (1 2), (1 0), (1 0), (1 0)] 
129: [10:18:29] UFFTYPER: Unrecognized atom type: Pt5+2 (1)
129: [10:18:29] UFFTYPER: Unrecognized atom type: N_5 (2)
129: [10:18:29] UFFTYPER: Unrecognized atom type: N_5 (3)
129: [10:18:29] UFFTYPER: Unrecognized atom type: N_5 (2)
129: [10:18:29] UFFTYPER: Unrecognized atom type: N_5 (3)
125: [10:18:29]   done
125: [10:18:29] -------------------------------------
125: [10:18:29]     Testing GitHubIssue62.
129: [10:18:29] UFFTYPER: Unrecognized charge state for atom: 1
125: [10:18:29] beta-lactam 39.6387
125: [10:18:29] cyclopropanone 174.698
125: [10:18:29] aziridine 337.986
125: [10:18:29] aziridinone 115.248
125: [10:18:29] isobutene 2.48217
125: [10:18:29] acetone 1.91788
129: [10:18:29] UFFTYPER: Unrecognized charge state for atom: 1
125: [10:18:29] cyclopentanone 10.1648
125: [10:18:29] cyclopropene 99.4921
125: [10:18:29] cyclobutene 41.0156
125: [10:18:29] cyclopropane 267.236
129: [10:18:29] UFFTYPER: Unrecognized charge state for atom: 1
125: [10:18:29] gamma-lactam 15.7471
125: [10:18:29] trans-2,3-diphenylcyclopropan-1-one 203.398
125: [10:18:30] cis-2,3-diphenylcyclopropan-1-one 206.852
129: [10:18:30] UFFTYPER: Unrecognized charge state for atom: 5
129: [10:18:30] UFFTYPER: Unrecognized charge state for atom: 5
125: [10:18:30] 2,3-diphenylcyclopropa-2-en-1-one 20.0443
125: [10:18:30] cyclopropylidencyclobutane 218.879
129: [10:18:30] UFFTYPER: Unrecognized charge state for atom: 5
125: [10:18:31] diphenylmethylidencyclobutane 79.6139
125: [10:18:31]   done
125: [10:18:31] -------------------------------------
125: [10:18:31]     Test Github Issue 613: UFF Atom type not properly assigned to lanthanides.
125: [10:18:31]   done
125: [10:18:31] -------------------------------------
125: [10:18:31]     Test square planar complexes
125: [10:18:31]   done
125: [10:18:31] -------------------------------------
125: [10:18:31]     Test octahedral complexes
125: [10:18:31]   done
126/213 Test #125: testUFFForceFieldHelpers ...............   Passed   79.50 sec
test 130
        Start 130: pyDistGeomHelpers

130: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/testDistGeom.py"
130: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap
130: Test timeout computed to be: 1500
129: [10:18:31] UFFTYPER: Unrecognized charge state for atom: 6
129: [10:18:31] UFFTYPER: Unrecognized charge state for atom: 6
129: [10:18:31] UFFTYPER: Unrecognized charge state for atom: 6
130: .[10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: ..[10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: ..[10:18:33] Molecule does not have explicit Hs. Consider calling AddHs()
130: .[10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:34] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:35] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:35] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:35] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:35] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:35] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:36] Molecule does not have explicit Hs. Consider calling AddHs()
128: building molecules
130: [10:18:36] Molecule does not have explicit Hs. Consider calling AddHs()
128: generating reference data
130: [10:18:36] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:36] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:36] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:37] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:37] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:37] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:37] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:37] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:37] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:38] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:38] Molecule does not have explicit Hs. Consider calling AddHs()
130: .[10:18:38] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:39] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:41] Molecule does not have explicit Hs. Consider calling AddHs()
129: [10:18:41] UFFTYPER: Warning: hybridization set to SP3 for atom 6
129: [10:18:42] UFFTYPER: Warning: hybridization set to SP3 for atom 6
129: [10:18:43] UFFTYPER: Warning: hybridization set to SP3 for atom 6
130: [10:18:43] Molecule does not have explicit Hs. Consider calling AddHs()
129: [10:18:44] UFFTYPER: Warning: hybridization set to SP3 for atom 11
129: [10:18:44] UFFTYPER: Warning: hybridization set to SP3 for atom 11
129: [10:18:44] UFFTYPER: Warning: hybridization set to SP3 for atom 11
130: [10:18:45] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:47] Molecule does not have explicit Hs. Consider calling AddHs()
128: validating reference data
130: [10:18:57] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:18:59] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:19:01] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:19:02] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:19:05] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:19:07] Molecule does not have explicit Hs. Consider calling AddHs()
128: processing
128:  launch :0
128:  launch :1
128:  launch :2
128:  launch :3
130: .[10:19:18] Molecule does not have explicit Hs. Consider calling AddHs()
130: ........[10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: .[10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: .[10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: [10:24:58] Molecule does not have explicit Hs. Consider calling AddHs()
130: .
130: ----------------------------------------------------------------------
130: Ran 19 tests in 385.018s
130: 
130: OK
127/213 Test #130: pyDistGeomHelpers ......................   Passed  387.97 sec
test 131
        Start 131: testMolAlign

131: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/testMolAlign
131: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign
131: Test timeout computed to be: 1500
131: ***********************************************************
131: Testing MolAlign
131: 	---------------------------------
131: 	 test1MolAlign 
131: 
131: 	---------------------------------
131: 	 test1GetBestRMS 
131: 
131: 	---------------------------------
131: 	 test1MolWithQueryAlign 
131: 
131: 	---------------------------------
131: 	 test2AtomMap 
131: 
131: 	---------------------------------
131: 	 test3Weights 
131: 
131: 	---------------------------------
131: 	 testIssue241 
131: 
131: ***********************************************************
128/213 Test #131: testMolAlign ...........................   Passed    2.76 sec
test 132
        Start 132: testO3AAlign

132: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/testO3AAlign
132: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign
132: Test timeout computed to be: 1500
132: ***********************************************************
132: Testing O3AAlign
132: 	---------------------------------
132: 	 testMMFFO3A 
132: 
132: 	---------------------------------
132: 	 testMMFFO3A with pre-computed dmat and MolHistogram
132: 
132: 	---------------------------------
132: 	 testMMFFO3A with constraints
132: 
132: 	---------------------------------
132: 	 testMMFFO3A with variable weight constraints followed by local-only optimization
132: 
132: 	---------------------------------
132: 	 testCrippenO3A 
132: 
132: 	---------------------------------
132: 	 testCrippenO3A with pre-computed dmat and MolHistogram
132: 
132: 	---------------------------------
132: 	 testCrippenO3A with constraints
132: 
132: 	---------------------------------
132: 	 testCrippenO3A with variable weight constraints followed by local-only optimization
132: 
132: 	---------------------------------
132: 	 testMMFFO3A multithreading
132: 
132: generating reference data
132: processing
132:  launch :0
132:  launch :1
132:  launch :2
132:  launch :3
29: [10:27:05] Finished
29: [10:27:05] -------------------------------------
29: [10:27:05]     Test github1843: RWMol.clear() should not destroy ring pointer.
29: [10:27:05] Finished
129/213 Test  #29: graphmolTest1 ..........................   Passed  880.95 sec
test 133
        Start 133: molAlignCatchTest

133: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/molAlignCatchTest
133: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign
133: Test timeout computed to be: 1500
133: ===============================================================================
133: All tests passed (9 assertions in 1 test case)
133: 
130/213 Test #133: molAlignCatchTest ......................   Passed    0.74 sec
test 134
        Start 134: pyMolAlign

134: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/testMolAlign.py"
134: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap
134: Test timeout computed to be: 1500
134: ............[10:28:56] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:57] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:57] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:57] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:58] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:58] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:58] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:58] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:59] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:59] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:28:59] Molecule does not have explicit Hs. Consider calling AddHs()
132: 	---------------------------------
132: 	 test O3A multithreading bug
132: 
132: 	---------------------------------
132: 	 testCrippenO3A multithreading
132: 
132: generating reference data
132: processing
132:  launch :0
132:  launch :1
132:  launch :2
132:  launch :3
134: ...[10:29:34] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:29:34] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:29:34] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:29:34] Molecule does not have explicit Hs. Consider calling AddHs()
134: [10:29:34] Molecule does not have explicit Hs. Consider calling AddHs()
134: ...
134: ----------------------------------------------------------------------
134: Ran 18 tests in 146.389s
134: 
134: OK
134: Testing MolAlign Wrappers
131/213 Test #134: pyMolAlign .............................   Passed  150.13 sec
test 135
        Start 135: testFeatures

135: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/testFeatures
135: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures
135: Test timeout computed to be: 1500
135: [10:29:37] -------------------------------------
135: [10:29:37] AtomType parser testing.
135: [10:29:37] SMARTS Parse Error: syntax error while parsing: [$([!$([NH0])_100;N,O,$([S])_101,$([N,O)_102])_103]
135: [10:29:37] SMARTS Parse Error: Failed parsing SMARTS '[$([!$([NH0])_100;N,O,$([S])_101,$([N,O)_102])_103]' for input: '[$([!$([NH0]);N,O,$([S]),$([N,O)])]'
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] FeatureDefinition parser testing.
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Test pulling feat defs from a string.
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] FeatureDef functionality testing.
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] FeatureFactory testing.
135: [10:29:37] 1
135: [10:29:37] 2
135: [10:29:37] 3
135: [10:29:37] 4
135: [10:29:37] 5
135: [10:29:37] 6
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Feature Location testing.
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Test building a FeatureFactory from a file
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Testing Issue 224.
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Testing Issue 225.
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Test Issue346
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Test Issue347
135: [10:29:37]   done
135: [10:29:37] -------------------------------------
135: [10:29:37] Testing Issue 348.
135: [10:29:37] SMARTS Parse Error: syntax error while parsing: [C[C]
135: [10:29:37] SMARTS Parse Error: Failed parsing SMARTS '[C[C]' for input: '[C[C]'
135: [10:29:37] -------------------------------------
135: [10:29:37] Testing Nested AtomType definitions.
135: [$([$([$([C;!$(C=[O,N,P,S]);!$(C#N)]),c]);R])]
135: [10:29:37] -------------------------------------
135: [10:29:37] Testing Github Issue #252: crash when calling getPos() with no conformer.
135: [10:29:37]      expect a precondition failure message below
135: [10:29:37] 
135: 
135: ****
135: Pre-condition Violation
135: molecule has no conformers
135: Violation occurred on line 37 in file ./Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
135: Failed Expression: dp_mol->getNumConformers()
135: ****
135: 
135: [10:29:37]    Done
135: [10:29:37] -------------------------------------
135: [10:29:37] Testing github 2077: add confId argument to MolChemicalFeatureFactor::getFeaturesForMol()
135: [10:29:37]   done
132/213 Test #135: testFeatures ...........................   Passed    0.81 sec
test 136
        Start 136: pyChemicalFeatures

136: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/testChemicalFeatures.py"
136: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap
136: Test timeout computed to be: 1500
136: .[10:29:41] Molecule does not have explicit Hs. Consider calling AddHs()
136: .[10:29:41] Molecule does not have explicit Hs. Consider calling AddHs()
136: ..[10:29:43] Molecule does not have explicit Hs. Consider calling AddHs()
136: .[10:29:43] Molecule does not have explicit Hs. Consider calling AddHs()
136: .[10:29:43] SMARTS Parse Error: syntax error while parsing: [N,O;!HQ]
136: [10:29:43] SMARTS Parse Error: Failed parsing SMARTS '[N,O;!HQ]' for input: '[N,O;!HQ]'
136: ...
136: ----------------------------------------------------------------------
136: Ran 9 tests in 2.094s
136: 
136: OK
133/213 Test #136: pyChemicalFeatures .....................   Passed    6.42 sec
test 137
        Start 137: testShapeHelpers

137: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/testShapeHelpers
137: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers
137: Test timeout computed to be: 1500
137: ***********************************************************
137: Testing ShapeHelpers
137: 	---------------------------------
137: 	 test1Encode 
137: 
137: 	---------------------------------
137: 	 test2Compare 
137: 
137: 	---------------------------------
137: 	 testGithub4364 
137: 
137: ***********************************************************
134/213 Test #137: testShapeHelpers .......................   Passed    1.02 sec
test 138
        Start 138: pyShapeHelpers

138: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/testShapeHelpers.py"
138: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap
138: Test timeout computed to be: 1500
138: .
138: ----------------------------------------------------------------------
138: Ran 1 test in 1.867s
138: 
138: OK
138: Testing Shape Helpers wrapper
135/213 Test #138: pyShapeHelpers .........................   Passed    5.85 sec
test 139
        Start 139: testMolCatalog

139: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/testMolCatalog
139: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog
139: Test timeout computed to be: 1500
136/213 Test #139: testMolCatalog .........................   Passed    0.35 sec
test 140
        Start 140: pyMolCatalog

140: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rough_test.py"
140: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap
140: Test timeout computed to be: 1500
140: .
140: ----------------------------------------------------------------------
140: Ran 1 test in 0.194s
140: 
140: OK
137/213 Test #140: pyMolCatalog ...........................   Passed    3.70 sec
test 141
        Start 141: moldraw2DTest1

141: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/moldraw2DTest1
141: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D
141: Test timeout computed to be: 1500
141:  ----------------- Test 1
141: file test1_5.svg gave hash 1886437816U not the expected 2964125114U
141:  Done
141:  ----------------- Test 2
141: file test2_1.png gave hash 4230278586U not the expected 2505713963U
141: file test2_2.png gave hash 2976972454U not the expected 4058920248U
141: file test2_3.png gave hash 2294574389U not the expected 2179746375U
141:  Done
141:  ----------------- Test 4
141: file test4_1.png gave hash 3092589250U not the expected 1924202631U
141:  Done
141:  ----------------- Test 5
141: file test5_1.png gave hash 3539752881U not the expected 2116545562U
141: file test5_2.png gave hash 2423212499U not the expected 1519942634U
141: file test5_3.png gave hash 3548499992U not the expected 3266389887U
141:  Done
141:  ----------------- Test 6 (atom labels)
141:  Done
141:  ----------------- Test 7 (backgrounds)
141: file test7_1.png gave hash 1462302540U not the expected 3331950391U
141: file test7_2.png gave hash 2603723146U not the expected 1686496331U
141:  Done
141:  ----------------- Test8: PrepareMolDrawing
141:  Done
141:  ----------------- Test multi-threaded drawing
141: reading molecules
141: generating reference drawings
141: processing
141:  launch :0
141:  launch :1
141:  launch :2
141:  launch :3
132: 	---------------------------------
132: 	 test getO3AForProbeConfs
132: 
132: ***********************************************************
138/213 Test #132: testO3AAlign ...........................   Passed  446.49 sec
test 142
        Start 142: moldraw2DTestCatch

142: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/moldraw2DTestCatch
142: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D
142: Test timeout computed to be: 1500
142: file testDativeBonds_2.svg gave hash 1653709106U not the expected 2355686690U
142: file testDativeBonds_2a.svg gave hash 62637009U not the expected 1026259021U
142: file testDativeBonds_2b.svg gave hash 2033042067U not the expected 3842058701U
142: file testDativeBonds_2c.svg gave hash 2907079847U not the expected 1000280203U
142: file testDativeBonds_2d.svg gave hash 4047859311U not the expected 3605527201U
142: file testKekulizationProblems_1.svg gave hash 2031549203U not the expected 3747357148U
142: file testGithub3226_1.png gave hash 927661609U not the expected 284815097U
142: file testGithub3226_2.png gave hash 1965790918U not the expected 2460913971U
142: file testGithub3226_3.png gave hash 1523555767U not the expected 993799198U
142: file testPNGMetadata_1.png gave hash 4220705417U not the expected 2022143293U
142: file testPNGMetadata_2.png gave hash 4120365840U not the expected 3078435362U
142: [10:32:36] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:36] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-1.svg gave hash 4179827925U not the expected 799391905U
142: [10:32:37] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:37] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-1.png gave hash 2226139972U not the expected 1551605661U
142: [10:32:38] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:38] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-2.svg gave hash 2499980011U not the expected 1696668329U
142: [10:32:39] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:39] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-2.png gave hash 2180779934U not the expected 2979412913U
142: [10:32:39] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:39] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-3.svg gave hash 3544722771U not the expected 3293983707U
142: [10:32:39] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:39] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-3.png gave hash 3035119067U not the expected 1765396301U
142: [10:32:40] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:40] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-4.svg gave hash 2804458995U not the expected 3348972281U
142: [10:32:40] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:32:40] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-4.png gave hash 3155958490U not the expected 2989933219U
142: file testHandDrawn-5a.svg gave hash 2854273812U not the expected 1171105985U
142: [10:33:04] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:33:04] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-5b.svg gave hash 1526777857U not the expected 1165866976U
142: [10:33:05] Font file /<<PKGBUILDDIR>>/Data/Fonts/ComicNeue-Regular.ttf not found.
142: [10:33:05] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
142: file testHandDrawn-5.png gave hash 1759310416U not the expected 1526220279U
142: file testBrackets-5a.svg gave hash 465981729U not the expected 1388227932U
141:  Done
141:  ----------------- Test Github #781: Rendering single-atom molecules
141:  Done
141:  ----------------- Test 3
141: file test3_1.png gave hash 2861619576U not the expected 1578780280U
141: file test3_1.svg gave hash 3270300975U not the expected 221601591U
141: file test3_2.png gave hash 3603334237U not the expected 1100583374U
141: file test3_2.svg gave hash 2036627423U not the expected 2826777428U
142: file testSGroupData-3a.svg gave hash 809298100U not the expected 2220120573U
141: file test3_3.png gave hash 843164212U not the expected 2405974883U
142: file testSGroupData-3a.svg gave hash 809298100U not the expected 2220120573U
141: file test3_3.svg gave hash 3804126957U not the expected 3967096277U
142: file testPositionVariation-1b.svg gave hash 2973415889U not the expected 3646629289U
141: file test3_4.png gave hash 374335101U not the expected 3523404550U
141: file test3_4.svg gave hash 1709761301U not the expected 1410409071U
141: file test3_5.png gave hash 2364150328U not the expected 411486117U
141: file test3_5.svg gave hash 1670626902U not the expected 2728740111U
142: file testMolAnnotations-1.svg gave hash 2654220737U not the expected 1091624544U
141: file test3_6.png gave hash 803932486U not the expected 2817453573U
142: file testMolAnnotations-2b.svg gave hash 1931944244U not the expected 400443600U
142: file testMolAnnotations-3b.svg gave hash 1856781884U not the expected 2068377089U
141: file test3_7.png gave hash 2788276096U not the expected 285272009U
142: file testMolAnnotations-3c.svg gave hash 3817208287U not the expected 4288169182U
141:  Done
141:  ----------------- Test Github774: upside-down drawings
141: file test774_1.png gave hash 599651207U not the expected 930347428U
142: file testMolAnnotations-4a.svg gave hash 2449558797U not the expected 569955128U
141: file test774_2.png gave hash 1568017647U not the expected 1089219024U
141:  Done
141:  ----------------- Test 9 (molecule legends)
141: file test9_1.svg gave hash 618149026U not the expected 3204904541U
141:  Done
141:  ----------------- Test Github852: Lines used to wedge bonds are too thick
141: file test852_1.png gave hash 448985338U not the expected 4140960740U
141: file test852_2.png gave hash 1286507157U not the expected 4294133823U
141: ----------------
141: ----------------
142: [10:33:10] unrecognized bond typefile testGithub4238_1.png gave hash 1692334446U not the expected 458925131U
141: ----------------
141: ----------------
141:  Done
141:  ----------------- Test Github860: Atom symbols in wrong order if bond comes from right
141: file test860_1.png gave hash 3505769376U not the expected 1000110983U
142: file testGithub4323_1.png gave hash 2202797014U not the expected 3711520691U
141: file test860_2.png gave hash 1824632798U not the expected 4079976606U
142: file testGithub4323_3.png gave hash 2628788879U not the expected 2300228708U
142: [10:33:12] FIELDDISP info not found for DAT SGroup which isn't associated with an atom. SGroup will not be rendered.
141: file test860_3.png gave hash 3477132615U not the expected 1675954369U
141:  Done
141:  ----------------- Test Github #910: ugly coordinates generated for peptide chains
142: file testGithub4538.svg gave hash 2062877382U not the expected 3198623323U
141:  Done
141:  ----------------- Test Github #932: mistake in SVG for wedged bonds
141:  Done
141:  ----------------- Test Github #953: default color should not be cyan
141:  Done
141:  ----------------- Test Github #983: wedged bonds between chiral centers drawn improperly
141:  Done
141:  ----------------- Test Deuterium, Tritium
141:  Done
141:  ----------------- Test crossed bonds
141:  Done
141:  ----------------- Testing drawing a second molecule
141:  Done
141:  ----------------- Testing drawing a grid of molecules
141:  Done
141:  ----------------- Testing drawMolecules
142: file testBaseFontSize.1a.svg gave hash 1087162659U not the expected 3939288880U
141:  Done
141:  ----------------- Test JSON Configuration
141:  Done
141:  ----------------- Testing github 1090: escape html characters in SVG output
141:  Done
141:  ----------------- Testing github 1035: overflow bug in SVG color generation
141:  Done
141:  ----------------- Testing github 1271: MolDraw2D not drawing anything for molecules aligned with the X or Y axes
141:  Done
141:  ----------------- Testing github 1322: add custom atom labels
141:  Done
141:  ----------------- Testing use of a black & white palette
141:  Done
141:  ----------------- Testing use of continuous highlighting with drawMolecules
141: file test15_1.svg gave hash 2007676254U not the expected 1167031482U
141: file test15_2.svg gave hash 2415021027U not the expected 1530255989U
141:  Done
141:  ----------------- Test 17 - Testing maximum font size
141:  Done
141:  ----------------- Testing github 1829: crash when drawMolecules() is called with an empty list
141:  Done
141:  ----------------- Testing use of fixed scales for drawing.
142: file testBaseFontSize.1b.svg gave hash 2022361911U not the expected 2617787443U
141:  Done
141:  ----------------- Testing rotation of 2D drawing.
141:  Done
141:  ----------------- Testing inclusion of molecule metadata
141:  Done
141:  ----------------- Testing Github2063: Drawing racemic bond stereo as crossed bonds should be the default
141:  Done
141:  ----------------- Testing Github2151: MolDraw2D: line width should be controlled by MolDrawOptions
141: file testGithub2151_1.svg gave hash 3327696636U not the expected 1918752877U
141: file testGithub2151_2.svg gave hash 2322775376U not the expected 1083134500U
141:  Done
141:  ----------------- Testing testGithub2762: MolDraw2D: HCl and ethane should be drawn
141:  Done
141:  ----------------- Testing testGithub2931: multi-coloured molecule highlights.
141:  Done
141:  ----------------- Testing annotation of 2D Drawing.
141: file test20_1.png gave hash 1082377497U not the expected 221585048U
141: file test20_2.png gave hash 3941490741U not the expected 1113799362U
142: file testFlexiCanvas.1d.svg gave hash 1548352612U not the expected 4220526884U
142: file testFlexiCanvas.2a.png gave hash 3210762570U not the expected 3618977786U
142: file testFlexiCanvas.2b.png gave hash 97674195U not the expected 2780757414U
141: file test20_3.png gave hash 2029681363U not the expected 1764616972U
141: file test20_4.png gave hash 3434782879U not the expected 781264160U
141:  Done
141:  ----------------- Test 21 - different font
141: Done
141:  ----------------- Test 22 - draw explicit methyls.
141: Done
141:  ----------------- Testing drawing of legends.
141:  Done
141:  ----------------- Test Github 3305 - change and scale line widths.
141: file testGithub3305_1.png gave hash 776737102U not the expected 316930677U
142: file testGithub4764.sz1.png gave hash 1174055860U not the expected 2320783268U
141: file testGithub3305_2.png gave hash 2240779709U not the expected 3520446560U
142: file testGithub4764.sz2.png gave hash 1422307072U not the expected 3297570843U
141: file testGithub3305_3.png gave hash 3143509735U not the expected 3960184199U
141: file testGithub3305_4.png gave hash 2364150328U not the expected 411486117U
142: file testGithub4764.sz3.png gave hash 1434201802U not the expected 2178018272U
141: file testGithub3305_5.png gave hash 3622809399U not the expected 3988290371U
141: file testGithub3305_6.png gave hash 1168180080U not the expected 4125772769U
141: file testGithub3305_7.png gave hash 465255668U not the expected 972161580U
141: Done
141:  ----------------- Test Github 3391 - maxFontSize interacting badly with DrawMolecules.
142: file github5383_1.png gave hash 3765227683U not the expected 2963331215U
142: file github5156_1.svg gave hash 2657077954U not the expected 695855770U
142: file github5156_2.svg gave hash 389946669U not the expected 1130781980U
142: file acs1996_1.png gave hash 428890560U not the expected 2674458798U
141: Done
141:  ----------------- Test Github 4156 - bad scale for radicals in grid
142: file acs1996_2.png gave hash 2246387064U not the expected 83755168U
141:  Done
141:  ----------------- Test JSON atomColourPalette
141:  Done
141:  ----------------- Test draw aromatic OR queries
141:  Done
141:  ----------------- Test AND queries
141:  Done
139/213 Test #141: moldraw2DTest1 .........................   Passed  210.61 sec
test 143
        Start 143: moldraw2DRxnTest1

143: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/moldraw2DRxnTest1
143: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D
143: Test timeout computed to be: 1500
142: file acs1996_10.svg gave hash 2059344201U not the expected 199499735U
142: [10:33:25] ACS drawing mode works best with a flexiCanvas i.e. a drawer created with width and height of -1.  The scale will be fixed, and that may not look great with a pre-determined size.
143:  ----------------- Test 1
142: file bond_highlights_8.svg gave hash 2395707233U not the expected 3826056528U
143: file rxn_test1_1.png gave hash 3139662266U not the expected 3579100589U
142: file test_github5974.svg gave hash 1974463406U not the expected 394879876U
143: file rxn_test1_2.png gave hash 1287841083U not the expected 3996724834U
143: file rxn_test1_3.png gave hash 3804993860U not the expected 4153817948U
142: file test_github6027_2.svg gave hash 2929458936U not the expected 330549720U
143: file rxn_test1_4.png gave hash 3310371137U not the expected 4175225545U
142: file test_github6112.svg gave hash 2943872681U not the expected 908847383U
143: file rxn_test1_5.png gave hash 3707687278U not the expected 3400977230U
143: file rxn_test1_6.png gave hash 3155945951U not the expected 2636974466U
143: file rxn_test1_6.svg gave hash 2833188750U not the expected 4153617489U
142: file github6336_1.png gave hash 1930712448U not the expected 2958833204U
143: file rxn_test1_7.png gave hash 652693444U not the expected 4164917700U
143: file rxn_test1_7.svg gave hash 4223750507U not the expected 3233001411U
143:  Done
143:  ----------------- Test 2: some examples that caused problems in testing
142: ===============================================================================
142: All tests passed (761 assertions in 89 test cases)
142: 
143: file rxn_test2_1.png gave hash 3615918541U not the expected 2654417911U
140/213 Test #142: moldraw2DTestCatch .....................   Passed   61.92 sec
test 144
        Start 144: pyMolDraw2D

144: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/testMolDraw2D.py"
144: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap
144: Test timeout computed to be: 1500
143: 3 [cH:1]1[cH:2][cH:3][c:4][cH:5][cH:6]1>>CC(C)[c:1]1[cH:2][cH:3][c:4][cH:5][cH:6]1	CN1CCC(CC1)N(C)S(=O)(=O)c2ccccc2	CC(C)c1ccc(cc1)S(=O)(=O)N(C)C2CCN(CC2)C
143: file rxn_test2_2_1.png gave hash 3694546718U not the expected 997060634U
143: 3 [cH:1]1[cH:2][cH:3][c:4][cH:5][cH:6]1>>[cH:3]1[cH:2][c:1]([cH:6][cH:5][c:4]1)Cl	Cc1cccc(c1C)N2CCN(CC2)CCCNC(=O)c3cc([nH]c3C)c4ccccc4	Cc1cccc(c1C)N2CCN(CC2)CCCNC(=O)c3cc([nH]c3C)c4ccc(cc4)Cl
143: file rxn_test2_2_2.png gave hash 1679936934U not the expected 2090979640U
143: 2 Cc1c(cc([nH]1)[c:1]2[cH:2][cH:3][cH:4][cH:5][cH:6]2)[C:7](=[O:8])[NH:9][CH2:10][CH2:11]>>CCc1nc(c(n1[c:1]2[cH:2][cH:3][cH:4][cH:5][cH:6]2)C)[C:7](=[O:8])[NH:9][CH2:10][CH2:11]	Cc1c(cc([nH]1)c2ccccc2)C(=O)NCCN3CCN(C
143: 2 C3)c4cccc(c4Cl)Cl	CCc1nc(c(n1c2ccccc2)C)C(=O)NCCN3CCN(CC3)c4cccc(c4Cl)Cl
143: 3 [c:1][C:2](=[O:3])[NH:4]CCC[CH2:5][N:6]([CH2:7])[CH2:8]>>[c:1][C:2](=[O:3])[NH:4]C[CH2:5][N:6]([CH2:7])[CH2:8]	CCCn1c(c(cc1c2ccccc2)C(=O)NCCCCN3CCN(CC3)c4cccc(c4Cl)Cl)C	CCCn1c(c(cc1c2ccccc2)C(=O)NCCN3CCN(CC3)c4cccc(c4Cl)Cl)C
143: file rxn_test2_2_3.png gave hash 2329845076U not the expected 857100114U
143: 3 [CH3:1]c1c(cc(n1[CH3:2])C(C)(C)C)[C:3]>>[CH3:2]c1c(c(nc(n1)[CH3:1])[C:3])OC	Cc1cccc(c1C)N2CCN(CC2)CCNC(=O)c3cc(n(c3C)C)C(C)(C)C	Cc1cccc(c1C)N2CCN(CC2)CCNC(=O)c3c(c(nc(n3)C)C)OC
143: file rxn_test2_2_4.png gave hash 3402030067U not the expected 610638635U
143:  Done
143:  ----------------- Test 3: test reactant highlighting
143: file rxn_test3_1.png gave hash 1192818355U not the expected 501226401U
143: file rxn_test3_1.svg gave hash 2199994110U not the expected 125426675U
143:  Done
143:  ----------------- Test 4: some examples from SMARTS in testing
143: draw!
143: file rxn_test4_1.png gave hash 294215623U not the expected 805353504U
143: file rxn_test4_1.svg gave hash 241136196U not the expected 3061904151U
143:  done
143: file rxn_test4_2.png gave hash 3932428226U not the expected 2842629749U
143: file rxn_test4_2.svg gave hash 2043921934U not the expected 108789094U
143:  Done
141/213 Test #143: moldraw2DRxnTest1 ......................   Passed   10.87 sec
test 145
        Start 145: testFMCS

145: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/testFMCS
145: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS
145: Test timeout computed to be: 1500
144: ...[10:33:37] Font file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Amadeus.ttf not found.
144: [10:33:37] Falling back to original font file /<<PKGBUILDDIR>>/Data/Fonts/Telex-Regular.ttf.
144: ..........[10:33:38] 
144: 
144: ****
144: Pre-condition Violation
144: molecule must not be None
144: Violation occurred on line 431 in file ./Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
144: Failed Expression: m
144: ****
144: 
144: .....................
144: ----------------------------------------------------------------------
144: Ran 34 tests in 6.122s
144: 
144: OK
142/213 Test #144: pyMolDraw2D ............................   Passed   13.49 sec
test 146
        Start 146: pyFMCS

146: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap/testFMCS.py"
146: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap
146: Test timeout computed to be: 1500
145: MCS: [#6]-[#6]1-[#6]-[#6]-[#6]-[#6]-[#6]-1 7 atoms, 7 bonds
145: Time elapsed 0.002 seconds
145: 
145:  test32()
145: MCS: [#6]1:[#6]:[#6]:[#6](:[#6]:[#6]:1)-[#6]=[#6]-[#6](-[#7]-[#6]1:[#6]:[#6](-[#16](-[#7]2-[#6]-[#6]-[#8]-[#6]-[#6]-2)(=[#8])=[#8]):[#6]:[#6]:[#6]:1-[#7](-[#6]-[#6])-[#6]-[#6])=[#8] 31 atoms, 33 bonds
145: Time elapsed 1.626 seconds
145: 
145:  test190()
145: MCS: [#6]1:[#6]:[#6]2:[#8]:[#6](:[#7]:[#6]:2:[#6]:[#6]:1)-[#6]1:[#6]:[#6](-[#7]-[#6](=[#8])-[#6]):[#6]:[#6]:[#6]:1 19 atoms, 21 bonds
145: Time elapsed 0.226 seconds
145: 
145:  test3()
145: MCS: [#6]1:[#6]:[#6]:[#6]:[#6]:[#6]:1-[#6]-[#6](=[#8])-[#7]-[#6]-[#6]-[#6]-[#6] 14 atoms, 14 bonds
145: Time elapsed 0.248 seconds
145: 
145: testSimpleFast()
145: MCS: [#6]-[#8]-[#6]-[#6]1:[#6]:[#7]:[#6]:[#6](:[#6]:1):[#7]:[#6]1:[#6]:[#6]:[#6]:[#6](:[#6]:1)-[#8]-[#6]1:[#6]:[#6]:[#6](:[#6]:[#6]:1)-[#17] 24 atoms, 26 bonds
145: Time elapsed 2.495 seconds
145: 
145: testSimple()
145: MCS: [#6]-&!@[#6]-&!@[#6](-&!@[#7]-&!@[#6](=&!@[#8])-&!@[#6]-&!@[#7]-&!@[#6](=&!@[#8])-&!@[#6])-&!@[#6](-&!@[#7]-&!@[#6])=&!@[#8] 15 atoms, 14 bonds
145: Time elapsed 2.048 seconds
145: MCS MatchFusedRings: [#6]-&!@[#6]-&!@[#6](-&!@[#7]-&!@[#6](=&!@[#8])-&!@[#6]-&!@[#7]-&!@[#6](=&!@[#8])-&!@[#6])-&!@[#6](-&!@[#7]-&!@[#6])=&!@[#8] 15 atoms, 14 bonds
145: Time elapsed 2.457 seconds
145: MCS MatchFusedRingsStrict: [#6]-&!@[#6]-&!@[#6](-&!@[#7]-&!@[#6](=&!@[#8])-&!@[#6]-&!@[#7]-&!@[#6](=&!@[#8])-&!@[#6])-&!@[#6](-&!@[#7]-&!@[#6])=&!@[#8] 15 atoms, 14 bonds
145: Time elapsed 2.455 seconds
145: 
145: testSegFault()
145: MCS: [#6]1:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@1 6 atoms, 6 bonds
145: Time elapsed 0.216 seconds
145: MCS MatchFusedRings: [#6]1:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@1 6 atoms, 6 bonds
145: Time elapsed 0.257 seconds
145: MCS MatchFusedRingsStrict: [#6]1:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@1 6 atoms, 6 bonds
145: Time elapsed 0.216 seconds
145: 
145: testThreshold()
145: MCS: [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: Time elapsed 0.001 seconds
145: 
145: testRing1()
145: MCS: [#6]-&!@[#8]-&!@[#6]-&!@[#6]1:&@[#6]:&@[#7]:&@[#6]:&@[#6]2:&@[#6]:&@1:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#7]:&@2 16 atoms, 17 bonds
145: Time elapsed 11.407 seconds
145: MCS MatchFusedRings: [#6]-&!@[#8]-&!@[#6]-&!@[#6]1:&@[#6]:&@[#7]:&@[#6]:&@[#6]2:&@[#6]:&@1:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#6]:&@[#7]:&@2 16 atoms, 17 bonds
145: Time elapsed 5.809 seconds
145: MCS MatchFusedRingsStrict: [#6]1:&@[#6]:&@[#7]:&@[#6](:&@[#6]:&@[#6]:&@1)-&!@[#6](=&!@[#8])-&!@[#8]-&!@[#6](-&!@[#6])-&!@[#6] 12 atoms, 12 bonds
145: Time elapsed 5.187 seconds
145: 
145: testAtomCompareIsotopes()
145: MCS: [0*]-[0*]-[13*] 3 atoms, 2 bonds
145: Time elapsed 0.076 seconds
145: 
145: testAtomCompareAnyAtom()
145: MCS: [#6]1:[#6]:[#6]:[#6]:[#6]:[#6]:1-[#6,#7,#8,#9,#17] 7 atoms, 7 bonds
145: Time elapsed 0.012 seconds
145: 
145: testAtomCompareAnyAtom()
145: MCS: [#6]1-,:[#6]-,:[#6]-,:[#6]-,:[#6]-,:[#6]-,:1=,-[#6,#7,#8,#9,#17] 7 atoms, 7 bonds
145: Time elapsed 0.002 seconds
145: 
145: testAtomCompareAnyAtom()
145: MCS: [#1]-[#6]1:[#6]:[#6]:[#6]:[#6]:[#6]:1-[#6,#8] 8 atoms, 8 bonds
145: Time elapsed 0.012 seconds
145: 
145: testAtomCompareAnyAtom()
145: MCS: [#6]1:[#6]:[#6]:[#6]:[#6]:[#6]:1-[#6,#8] 7 atoms, 7 bonds
145: Time elapsed 0.002 seconds
145: 
145: testJnk1LigandsDistance()
145: MCS: [#6]-[#6]-[#8]-[#6]1:[#6](:[#6](:[#6]:[#6](:[#7]:1)-[#7]-[#6](=[#8])-[#6]-[#6]1:[#6]:[#6]:[#6]:[#6]:[#6]:1)-[#7])-[#6]#[#7] CCOc1nc(NC(=O)Cc2ccccc2)cc(N)c1C#N 22 atoms, 23 bonds
145: Time elapsed 0.228 seconds
145: MCS: [#6]-[#6]-[#8]-[#6]1:[#6](:[#6](:[#6]:[#6](:[#7]:1)-[#7]-[#6](=[#8])-[#6]-[#6]1:[#6]:[#6]:[#6]:[#6](:[#6]:1)-[#6,#8])-[#7])-[#6]#[#7] *c1cccc(CC(=O)Nc2cc(N)c(C#N)c(OCC)n2)c1 23 atoms, 24 bonds
145: Time elapsed 0.032 seconds
145: 
145: test18()
145: Query +MAP [CH3:0][c:1]1[n:2][c:3]([CH2:4][N:5]([CH:6]([CH3:7])[c:8]2[n:9][cH:10][cH:11][cH:12][cH:13]2)[CH2:14][CH2:15][CH2:16][CH2:17][NH2:18])[cH:19][cH:20][cH:21]1
145: MCS: [#6](:[#7]:[#6]-[#6]-[#7](-[#6](-[#6])-[#6]1:[#7]:[#6]:[#6]:[#6]:[#6]:1)-[#6]-[#6]-[#6]-[#6]-[#7]):[#6]:[#6]:[#6] 21 atoms, 21 bonds
145: Time elapsed 0.184 seconds
145: 
145: test504()
145: Query +MAP [CH2:0]([CH2:1][CH2:2][NH:3][C:4]([CH:5]1[CH2:6][CH:7]1[c:8]1[c:9][c:10]([Cl:11])[c:12]([Cl:13])[cH:14][c:15]1)=[O:16])[CH2:17][CH2:18][N:19]1[CH2:20][CH2:21][CH:22]([NH:23][C:24]([NH:25][c:26]2[cH:27][cH:28][c:29]([Cl:30])[cH:31][cH:32]2)=[O:33])[CH2:34]1
145: MCS: [#6](-[#6]-[#6]-[#7]-[#6](-[#6]1-[#6]-[#6]-1-[#6]1:[#6]:[#6](-[#17]):[#6](:[#6]:[#6]:1)-[#17])=[#8])-[#6]-[#6]-[#7](-[#6]-[#6]-[#6]-[#7]-[#6](-[#7]-[#6]1:[#6]:[#6]:[#6]:[#6]:[#6]:1)=[#8])-[#6] 34 atoms, 36 bonds
145: Time elapsed 1.700 seconds
145: MCS: [#6]-[#6]1-[#6]-[#6]-[#6]-[#6]-[#6]-1 7 atoms, 7 bonds
145: Time elapsed 0.029 seconds
145: MCS: [#6]1-[#6]-[#7]-[#6](-[#6]-[#7]-1-[#6]1:[#6](:[#6]:[#6]2:[#6](:[#6](:[#6]:[#7](-[#6]3-[#6]-[#6]-3):[#6]:2:[#6]:1)-[#6](=[#8])-[#8])=[#8])-[#9])-[#6] 25 atoms, 28 bonds
145: Time elapsed 0.619 seconds
145: Query Cc1c(F)c(N2CCNC(C)C2)cc2c1c(=O)c(C(=O)O)cn2C1CC1 26(26) atoms, 29(28) bonds
145: 1 Seeds:1 MCS 25 atoms, 28 bonds for 0.0253 seconds. bond[0]=6
145: STATISTICS:
145: Total Growing Steps  = 1, MCS found on 1 step, for 0.0253 seconds
145: Initial   Seeds      = 1,  Mismatched 0
145: Inspected Seeds      = 2
145: Rejected by BestSize = 0
145: SingleBondExcluded   = 0
145: MatchCheck Seeds     = 2
145:      MatchCalls = 2
145:      MatchFound = 1
145:  fastMatchCalls = 1
145:  fastMatchFound = 0
145:  slowMatchCalls = 2
145:  slowMatchFound = 1
145:   DupCacheFound = 0   0 matched, 0 mismatched
145: HashCache size  = 1 keys
145: HashCache size  = 1 entries
145: FindHashInCache = 2
145: HashFoundInCache= 0
145: ExactMatchCalls = 0
145: ExactMatchFound = 0
145: Time elapsed 0.028 seconds
145: query=OCCl SubstructMatch(useChirality=false) res =1 size=3
145: query=OCCl SubstructMatch(useChirality=true ) res =1 size=3
145: test target = O[C@H](F)CCl query = C(F)C useChirality = 0
145: res sub = 1 size=3
145: MCS: [#6](-[#9])-[#6] 3 atoms, 2 bonds
145: test target = O[C@H](F)CCl query = C(F)C useChirality = 1
145: res sub = 1 size=3
145: MCS: [#6](-[#9])-[#6] 3 atoms, 2 bonds
145: test target = CC[C@H](F)Cl query = CCC useChirality = 0
145: res sub = 1 size=3
145: MCS: [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = CC[C@H](F)Cl query = CCC useChirality = 1
145: res sub = 1 size=3
145: MCS: [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = CCC(F)Cl query = CC useChirality = 0
145: res sub = 1 size=2
145: MCS: [#6]-[#6] 2 atoms, 1 bonds
145: test target = CCC(F)Cl query = CC useChirality = 1
145: res sub = 1 size=2
145: MCS: [#6]-[#6] 2 atoms, 1 bonds
145: test target = C[C@H](F)CCl query = C[C@H](F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#6]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = C[C@H](F)CCl query = C[C@H](F)C useChirality = 1
145: res sub = 1 size=4
145: MCS: [#6]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = C[C@H](F)CCl query = C[C@@H](F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#6]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = C[C@H](F)CCl query = C[C@@H](F)C useChirality = 1
145: res sub = 1 size=4
145: MCS: [#6]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = O[C@H](F)CCl query = CC(F)C useChirality = 0
145: res sub = 0 size=0
145: MCS: [#6]-[#6]-[#9] 3 atoms, 2 bonds
145: test target = O[C@H](F)CCl query = CC(F)C useChirality = 1
145: res sub = 0 size=0
145: MCS: [#6]-[#6]-[#9] 3 atoms, 2 bonds
145: test target = O[C@H](F)CCl query = OC(F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = O[C@H](F)CCl query = OC(F)C useChirality = 1
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = O[C@H](F)CCl query = O[C@H](F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = O[C@H](F)CCl query = O[C@H](F)C useChirality = 1
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = O[C@H](F)CCl query = O[C@@H](F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = O[C@H](F)CCl query = O[C@@H](F)C useChirality = 1
145: res sub = 0 size=0
145: MCS: [#8]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = OC(F)CCl query = OC(F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = OC(F)CCl query = OC(F)C useChirality = 1
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = OC(F)CCl query = O[C@H](F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = OC(F)CCl query = O[C@H](F)C useChirality = 1
145: res sub = 0 size=0
145: MCS: [#9] 1 atoms, 0 bonds
145: test target = OC(F)CCl query = O[C@@H](F)C useChirality = 0
145: res sub = 1 size=4
145: MCS: [#8]-[#6](-[#9])-[#6] 4 atoms, 3 bonds
145: test target = OC(F)CCl query = O[C@@H](F)C useChirality = 1
145: res sub = 0 size=0
145: MCS: [#9] 1 atoms, 0 bonds
145: test target = O[C@H](F)CCl query = O[C@H]C useChirality = 0
145: res sub = 1 size=3
145: MCS: [#8]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = O[C@H](F)CCl query = O[C@H]C useChirality = 1
145: res sub = 1 size=3
145: MCS: [#8]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = O[C@H](F)CCl query = O[C@@H]C useChirality = 0
145: res sub = 1 size=3
145: MCS: [#8]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = O[C@H](F)CCl query = O[C@@H]C useChirality = 1
145: res sub = 1 size=3
145: MCS: [#8]-[#6]-[#6] 3 atoms, 2 bonds
145: 
145: 0. <<<<<<<<< actual MCS: [#6]-[#6]-[#6] 3 atoms, 2 bonds >>>>>>>
145: test target = CC[C@H](F)Cl query = CC[C@H] useChirality = 0
145: res sub = 1 size=3
145: MCS: [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: test target = CC[C@H](F)Cl query = CC[C@H] useChirality = 1
145: res sub = 1 size=3
145: MCS: [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: 	done
145: MCS: [#6]1-&@[#6](-&!@[#6])-&@[#6]-&@[#6]-&@[#6]-&@[#6]-&@1 7 atoms, 7 bonds
145: 
145: MCS: [#6]-&!@[#6] 2 atoms, 1 bonds
145: 
145: [10:34:43] The provided InitialSeed is not an MCS and will be ignored
145: MCS MatchStereo false : [#6]-[#6]-[#6]=[#6]-[#6]-[#6] 6 atoms, 5 bonds
145: MCS MatchStereo true  : [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: MCS MatchStereo false : [#6]-[#6]-[#6]=[#6]-[#6]-[#6] 6 atoms, 5 bonds
145: MCS MatchStereo true  : [#6]-[#6]-[#6] 3 atoms, 2 bonds
145: MCS MatchStereo false : [#6]-[#6]-[#6]=[#6]-[#6]-[#6] 6 atoms, 5 bonds
145: MCS MatchStereo true  : [#6]-[#6]-[#6]=[#6]-[#6]-[#6] 6 atoms, 5 bonds
145: TOTAL Time elapsed 66.61 seconds
143/213 Test #145: testFMCS ...............................   Passed   67.28 sec
test 147
        Start 147: FMCStest

147: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/FMCStest
147: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test
147: Test timeout computed to be: 1500
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
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147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
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147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_15113.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_16613.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_30745.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_30861.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_31495.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_34869.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_36158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_36559.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_37434.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_39147.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_43754.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_44011.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_44158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_48076.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_48961.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_49648.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_49703.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_51128.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_51343.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_51842.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_54554.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_100_55749.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_17256.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_20244.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_20245.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_30149.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_30499.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_36186.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_39262.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_43966.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_45279.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_48029.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_49064.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_49801.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_50681.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_54039.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_58265.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_58358.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_58866.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10188_60810.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_21358.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_21597.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_30111.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_30349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_31746.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_31822.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_35220.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_37603.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_37964.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_39508.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_42164.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_42577.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_44072.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_45522.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_46700.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_46719.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_46744.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_48517.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_49087.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_50034.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_51475.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_53483.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_53506.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_54598.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_55614.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_55737.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_57090.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_57705.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_57785.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_58463.txt
147: 
147: testChEMBfopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: L_Txt() chembl_II_sets/Target_no_10193_58700.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_61003.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10193_61349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10260_38526.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10260_50778.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10260_52179.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10260_54285.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_30224.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_31222.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_37349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_37369.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_37465.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_37541.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_38371.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_44314.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_44578.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_45765.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_46281.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_47928.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_50624.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_51341.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_51662.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_51767.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_53081.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_53396.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_53407.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_58823.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_59190.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_60672.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10280_61176.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_20905.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_30074.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_30175.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_30423.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_31555.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_34878.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_35926.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10434_42168.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_20859.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_30060.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_30061.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_30606.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_30866.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_31249.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_34921.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_35188.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_36636.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_37466.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_39202.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_43952.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_49345.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_49591.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_49854.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_51416.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_53537.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_58879.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_60679.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_107_61269.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_20600.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_20859.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_30060.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_30606.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_30866.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_31558.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_35188.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_37466.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_43875.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_48911.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_49591.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_49854.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: no_108_57887.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_60679.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_108_6857.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_15478.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_20853.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_30840.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_30862.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_30918.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_30994.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_31014.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_31508.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_31623.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_35003.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_35004.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_35281.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_35957.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_36520.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_36641.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_38586.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_44431.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_45093.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_51302.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_5247.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_52937.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_57198.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_5739.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_10980_6535.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_20205.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_20986.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_30091.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_34698.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_34705.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_37038.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_37272.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_37447.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_38909.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_38953.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_39472.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_45825.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_47179.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_49028.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_49860.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_51984.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_53395.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_53826.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_54121.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_54530.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_55738.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_57725.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11140_58590.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11365_20432.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11365_30331.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11365_37956.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11365_48114.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11365_58566.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_34731.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_34818.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_37318.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_37339.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_37564.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_39504.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_39561.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_46082.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_46089.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_47349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_47757.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_51593.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_54754.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_58262.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11489_58958.txt
147: 
147: testChEMBL_Txt(fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: ) chembl_II_sets/Target_no_114_16827.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_20503.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_20724.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_30254.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_30321.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_30572.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_31116.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_31281.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_31443.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_34747.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_34920.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_35040.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_36623.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_37136.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_37208.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_38298.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_38554.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_39088.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_39543.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_44049.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_44562.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_45180.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_45867.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_46087.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_46829.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_47546.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_48395.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_50461.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_50765.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_51669.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_52381.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_57231.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_114_58246.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_30999.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_31021.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_31650.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_35011.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_37014.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_44598.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_48446.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_50614.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_50615.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_50618.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11534_51950.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_31616.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_38381.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_45757.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_46816.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_50701.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_54049.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_57890.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11575_61045.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_30194.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_31421.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_35538.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_55727.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_60676.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_61130.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_11631_6444.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_15623.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_20096.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_21591.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_30184.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_30380.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_30745.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_30861.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_31619.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_34869.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_35284.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_36158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_36915.txt
147: 
147: testChEMBL_Txfopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: t() chembl_II_sets/Target_no_121_37434.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_37541.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_37677.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_38837.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_39530.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_43793.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_44158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_44164.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_44579.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_44593.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_44692.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_44914.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_45878.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_48050.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_48706.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_48944.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_48961.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_49880.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_50055.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_50512.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_51064.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_53537.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_55749.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_58879.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_121_6876.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_44664.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_46451.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_50640.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_56102.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_58015.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_59089.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_59092.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12209_61340.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12252_31458.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12252_38481.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12252_42104.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12252_49475.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12252_49933.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12252_50558.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_37249.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_39117.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_48227.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_48229.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_53969.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_54262.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_55353.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_126_61212.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_20250.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_20506.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_20626.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_20689.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_21358.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_30158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_30349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_34843.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_35220.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_36318.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_36800.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_39349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_45385.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_45676.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_46700.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_46719.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_48517.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_52690.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_53483.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_55435.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_56102.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_58015.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_12952_58375.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_1295fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: 2_58700.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_16724.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_2710.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_30128.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_31250.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_35519.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_36905.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_46788.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_4737.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_55736.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_13001_57473.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_16146.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_30313.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_30539.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_30653.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_30988.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_31179.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_31339.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_3525.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_36886.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_37020.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_38128.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_43952.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_45210.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_45899.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_47889.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_51800.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_53158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_5330.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_55648.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_56096.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_57287.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_57399.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_57606.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_58470.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_130_60894.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_15010.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_20304.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_20542.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_20788.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_21358.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_30349.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_31103.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_31764.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_31822.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_35220.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_37964.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_42164.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_44072.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_45522.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_46719.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_46744.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_48416.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_49740.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_50034.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_50640.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_53483.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_53506.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_53814.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_55435.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_56074.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_56107.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_57090.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_57705.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_57785.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_57861.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_58583.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_59089.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_15_59092.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_20600.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_30764.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_34876.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_37427.tfopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: xt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_38266.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_45283.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_46990.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_47123.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_47900.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_48050.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_48062.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_48076.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_50718.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_50972.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_51372.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_51830.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_53049.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_53505.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_54021.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_54565.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_54570.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_57666.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_57890.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_58072.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_58634.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_58643.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_59080.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_59202.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_59346.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_60379.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_60385.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_165_61098.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_31154.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_35648.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_48914.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_51975.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_52435.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_55790.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_58958.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_17045_61146.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_20191.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_20562.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_20606.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_20607.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_30003.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_30402.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_30726.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_30924.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31457.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31460.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31600.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31620.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31640.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31782.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31797.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31829.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_31856.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_34690.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_34691.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_34694.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_35712.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_37497.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_37539.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_48070.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_48219.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_48824.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_48902.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_52867.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_53534.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_54570.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_58727.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_60159.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_19905_60661.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_30037.txt
147: 
147: testChEMBL_Txt() chefopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: mbl_II_sets/Target_no_259_34734.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_35365.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_35787.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_36793.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_37845.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_38328.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_39374.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_43936.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_44059.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_44405.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_44424.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_45166.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_46158.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_46425.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_47187.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_48435.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_48817.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_48849.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_48957.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_48965.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_49519.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_49921.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_50392.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_50972.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_52405.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_52442.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_53169.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_54640.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_57207.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_58537.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_58920.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_259_60358.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_25_16077.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_25_34943.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_25_36391.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_25_36574.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_25_52906.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_25_54642.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_16385.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_20333.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_20774.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_35825.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_37637.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_47741.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_48567.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_48841.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_49589.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_50564.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_51201.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_53150.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_55747.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_43_58276.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_20813.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_2331.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_2391.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_30374.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_30512.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_30796.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_31058.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_31450.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_36609.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_36636.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_38266.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_43800.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_47621.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_49433.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_49550.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_49865.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_51005.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_52373.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_53878.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_54554.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_57508.txtfopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: 
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_57618.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_59484.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_51_6563.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_16845.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_37106.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_37272.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_47947.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_50754.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_55800.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_61_57380.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_65_35328.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_65_36137.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_65_38826.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_65_44596.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_65_51275.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_65_55671.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_20155.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_30616.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_30653.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_30988.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_31339.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_31527.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_31631.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_36047.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_36568.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_36636.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_37020.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_38128.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_43952.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_45210.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_47889.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_51064.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_51800.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_5330.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_57508.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_58470.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_72_60894.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_20730.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_20753.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_30097.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_30663.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_35365.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_35375.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_35918.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_36010.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_36780.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_36793.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_37845.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_39110.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_39546.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_43936.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_44405.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_44424.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_44683.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_45166.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_46648.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_46986.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_47070.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_47187.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_48435.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_48817.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_49138.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_49460.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_49519.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_49532.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_49829.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_50608.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_54640.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_87_61082.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_90_15727.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_90_20155.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_90_30407.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_90_3525.txt
147: 
147: testChEMBfopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: fopen testChEMBL_Txt(): No such file or directory
147: L_Txt() chembl_II_sets/Target_no_93_12377.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_1308.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_34759.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_35447.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_42214.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_45877.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_47082.txt
147: 
147: testChEMBL_Txt() chembl_II_sets/Target_no_93_57082.txt
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13-10000-random-pairs.sdf
147: ERROR: RDKit could not load input file
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13_pairs.smi
147: ERROR: RDKit could not load input file
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13_knearest_2.smi
147: ERROR: RDKit could not load input file
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13_knearest_10.smi
147: ERROR: RDKit could not load input file
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13_knearest_100.smi
147: ERROR: RDKit could not load input file
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13_threshold_80.smi
147: ERROR: RDKit could not load input file
147: 
147: testFileSDF_RandomSet(): benchmark/chembl13_threshold_90.smi
147: ERROR: RDKit could not load input file
144/213 Test #147: FMCStest ...............................   Passed    0.78 sec
test 148
        Start 148: molHashCatchTest

148: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/molHashCatchTest
148: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash
148: Test timeout computed to be: 1500
148: ===============================================================================
148: All tests passed (300 assertions in 8 test cases)
148: 
145/213 Test #148: molHashCatchTest .......................   Passed    1.53 sec
test 149
        Start 149: pyMolHash

149: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap/testMolHash.py"
149: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap
149: Test timeout computed to be: 1500
149: ...
149: ----------------------------------------------------------------------
149: Ran 3 tests in 0.227s
149: 
149: OK
146/213 Test #149: pyMolHash ..............................   Passed    4.54 sec
test 150
        Start 150: testMMPA

150: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/testMMPA
150: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA
150: Test timeout computed to be: 1500
150: 
150: TEST mol: Case1 Cc1ccccc1NC(=O)[C:7](C)[NH+]1CCCC1 Case1
150: Time elapsed 0.069956 seconds
150:  1: res= NULL,C[*:1].C[C:2](C(=O)Nc1ccccc1[*:1])[NH+]1CCCC1
150:  1: NOREF. Reference data NOT LISTED in test case.
150:  2: res= c1ccc([*:2])c([*:1])c1,C[*:1].C[C:3](C(=O)N[*:2])[NH+]1CCCC1
150:  2: NOREF. Reference data NOT LISTED in test case.
150:  3: res= O=C(Nc1ccccc1[*:1])[*:2],C[*:1].C[C:3]([NH+]1CCCC1)[*:2]
150:  3: NOREF. Reference data NOT LISTED in test case.
150:  4: res= O=C(Nc1ccccc1[*:1])[C:0]([NH+]1CCCC1)[*:2],C[*:1].C[*:2]
150:  4: NOREF. Reference data NOT LISTED in test case.
150:  5: res= O=C(Nc1ccccc1[*:1])[C:0]([*:2])[*:3],C1CC[NH+]([*:3])C1.C[*:1].C[*:2]
150:  5: NOREF. Reference data NOT LISTED in test case.
150:  6: res= C[C:0](C(=O)Nc1ccccc1[*:1])[*:2],C1CC[NH+]([*:2])C1.C[*:1]
150:  6: NOREF. Reference data NOT LISTED in test case.
150:  7: res= NULL,C[C:2](C(=O)N[*:1])[NH+]1CCCC1.Cc1ccccc1[*:1]
150:  7: NOREF. Reference data NOT LISTED in test case.
150:  8: res= O=C(N[*:3])[*:1],C[C:2]([NH+]1CCCC1)[*:1].Cc1ccccc1[*:3]
150:  8: NOREF. Reference data NOT LISTED in test case.
150:  9: res= O=C(N[*:2])[C:0]([NH+]1CCCC1)[*:1],C[*:1].Cc1ccccc1[*:2]
150:  9: NOREF. Reference data NOT LISTED in test case.
150: 10: res= O=C(N[*:3])[C:0]([*:1])[*:2],C1CC[NH+]([*:2])C1.C[*:1].Cc1ccccc1[*:3]
150: 10: NOREF. Reference data NOT LISTED in test case.
150: 11: res= C[C:0](C(=O)N[*:2])[*:1],C1CC[NH+]([*:1])C1.Cc1ccccc1[*:2]
150: 11: NOREF. Reference data NOT LISTED in test case.
150: 12: res= NULL,C[C:2]([NH+]1CCCC1)[*:1].Cc1ccccc1NC(=O)[*:1]
150: 12: NOREF. Reference data NOT LISTED in test case.
150: 13: res= C1CC[NH+]([C:0]([*:1])[*:2])C1,C[*:1].Cc1ccccc1NC(=O)[*:2]
150: 13: NOREF. Reference data NOT LISTED in test case.
150: 14: res= [C:0]([*:1])([*:2])[*:3],C1CC[NH+]([*:3])C1.C[*:1].Cc1ccccc1NC(=O)[*:2]
150: 14: NOREF. Reference data NOT LISTED in test case.
150: 15: res= C[C:0]([*:1])[*:2],C1CC[NH+]([*:2])C1.Cc1ccccc1NC(=O)[*:1]
150: 15: NOREF. Reference data NOT LISTED in test case.
150: 16: res= NULL,C[*:1].Cc1ccccc1NC(=O)[C:2]([NH+]1CCCC1)[*:1]
150: 16: NOREF. Reference data NOT LISTED in test case.
150: 17: res= Cc1ccccc1NC(=O)[C:0]([*:1])[*:2],C1CC[NH+]([*:2])C1.C[*:1]
150: 17: NOREF. Reference data NOT LISTED in test case.
150: 18: res= NULL,C1CC[NH+]([*:1])C1.Cc1ccccc1NC(=O)[C:2](C)[*:1]
150: 18: NOREF. Reference data NOT LISTED in test case.
150: 
150:  --- UNMATCHED Reference RESULTS: --- 
150:  1: Cc1ccccc1NC(=O)[C:7](C)[NH+]1CCCC1,Case1,[*:1][C:7]([*:2])[*:3],C1CC[NH+]([*:3])C1.C[*:2].Cc1ccccc1NC(=O)[*:1]
150:  -----------------------------------
150: Time elapsed 0.045249 seconds
150: 
150: TEST 1 mol: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-] ZINC21984717
150:    1: NULL, C[*:1].O=C(NCCO)c1c([*:1])n([O-])c2ccccc2[n+]1=O
150:  1: PASSED. matchedRefRes = 4
150:    2: O=[n+]1c([*:2])c([*:1])n([O-])c2ccccc21, C[*:1].O=C(NCCO)[*:2]
150:  2: PASSED. matchedRefRes = 1
150:    3: O=C(N[*:2])c1c([*:1])n([O-])c2ccccc2[n+]1=O, C[*:1].OCC[*:2]
150:  3: PASSED. matchedRefRes = 6
150:    4: O=C(NC[*:2])c1c([*:1])n([O-])c2ccccc2[n+]1=O, C[*:1].OC[*:2]
150:  4: PASSED. matchedRefRes = 13
150:    5: O=C(NCC[*:2])c1c([*:1])n([O-])c2ccccc2[n+]1=O, C[*:1].O[*:2]
150:  5: PASSED. matchedRefRes = 12
150:    6: NULL, Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].O=C(NCCO)[*:1]
150:  6: PASSED. matchedRefRes = 10
150:    7: O=C(N[*:1])[*:2], Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].OCC[*:1]
150:  7: NOREF. Reference data NOT LISTED in test case.O=C(N[*:1])[*:2],Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].OCC[*:1]
150:    8: O=C(NC[*:1])[*:2], Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150:  8: NOREF. Reference data NOT LISTED in test case.O=C(NC[*:1])[*:2],Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150:    9: O=C(NCC[*:1])[*:2], Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].O[*:1]
150:  9: NOREF. Reference data NOT LISTED in test case.O=C(NCC[*:1])[*:2],Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].O[*:1]
150:    10: NULL, Cc1c(C(=O)N[*:1])[n+](=O)c2ccccc2n1[O-].OCC[*:1]
150: 10: PASSED. matchedRefRes = 3
150:    11: C([*:1])[*:2], Cc1c(C(=O)N[*:2])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150: 11: NOREF. Reference data NOT LISTED in test case.C([*:1])[*:2],Cc1c(C(=O)N[*:2])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150:    12: C(C[*:2])[*:1], Cc1c(C(=O)N[*:1])[n+](=O)c2ccccc2n1[O-].O[*:2]
150: 12: PASSED. matchedRefRes = 8
150:    13: NULL, Cc1c(C(=O)NC[*:1])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150: 13: PASSED. matchedRefRes = 9
150:    14: C([*:1])[*:2], Cc1c(C(=O)NC[*:1])[n+](=O)c2ccccc2n1[O-].O[*:2]
150: 14: PASSED. matchedRefRes = 11
150:    15: NULL, Cc1c(C(=O)NCC[*:1])[n+](=O)c2ccccc2n1[O-].O[*:1]
150: 15: PASSED. matchedRefRes = 2
150: 
150:  --- UNMATCHED Reference RESULTS: --- 
150:  5: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,C([*:1])[*:2],Cc1c(C(=O)N[*:1])[n+](=O)c2ccccc2n1[O-].OC[*:2]
150:  7: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,O=C(N[*:2])[*:1],Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].OCC[*:2]
150: 14: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,O=C(NCC[*:2])[*:1],Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].O[*:2]
150: 15: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,O=C(NC[*:2])[*:1],Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].OC[*:2]
150:  -----------------------------------
150: 
150: TEST mol: ZINC21984717 Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-] ZINC21984717
150: Time elapsed 0.056415 seconds
150:  1: res= NULL,C[*:1].O=C(NCCO)c1c([*:1])n([O-])c2ccccc2[n+]1=O
150:  1: PASSED. matchedRefRes = 4
150:  2: res= O=[n+]1c([*:2])c([*:1])n([O-])c2ccccc21,C[*:1].O=C(NCCO)[*:2]
150:  2: PASSED. matchedRefRes = 1
150:  3: res= O=C(N[*:2])c1c([*:1])n([O-])c2ccccc2[n+]1=O,C[*:1].OCC[*:2]
150:  3: PASSED. matchedRefRes = 6
150:  4: res= O=C(NC[*:2])c1c([*:1])n([O-])c2ccccc2[n+]1=O,C[*:1].OC[*:2]
150:  4: PASSED. matchedRefRes = 13
150:  5: res= O=C(NCC[*:2])c1c([*:1])n([O-])c2ccccc2[n+]1=O,C[*:1].O[*:2]
150:  5: PASSED. matchedRefRes = 12
150:  6: res= NULL,Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].O=C(NCCO)[*:1]
150:  6: PASSED. matchedRefRes = 10
150:  7: res= O=C(N[*:1])[*:2],Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].OCC[*:1]
150:  7: NOREF. Reference data NOT LISTED in test case.
150:  8: res= O=C(NC[*:1])[*:2],Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150:  8: NOREF. Reference data NOT LISTED in test case.
150:  9: res= O=C(NCC[*:1])[*:2],Cc1c([*:2])[n+](=O)c2ccccc2n1[O-].O[*:1]
150:  9: NOREF. Reference data NOT LISTED in test case.
150: 10: res= NULL,Cc1c(C(=O)N[*:1])[n+](=O)c2ccccc2n1[O-].OCC[*:1]
150: 10: PASSED. matchedRefRes = 3
150: 11: res= C([*:1])[*:2],Cc1c(C(=O)N[*:2])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150: 11: NOREF. Reference data NOT LISTED in test case.
150: 12: res= C(C[*:2])[*:1],Cc1c(C(=O)N[*:1])[n+](=O)c2ccccc2n1[O-].O[*:2]
150: 12: PASSED. matchedRefRes = 8
150: 13: res= NULL,Cc1c(C(=O)NC[*:1])[n+](=O)c2ccccc2n1[O-].OC[*:1]
150: 13: PASSED. matchedRefRes = 9
150: 14: res= C([*:1])[*:2],Cc1c(C(=O)NC[*:1])[n+](=O)c2ccccc2n1[O-].O[*:2]
150: 14: PASSED. matchedRefRes = 11
150: 15: res= NULL,Cc1c(C(=O)NCC[*:1])[n+](=O)c2ccccc2n1[O-].O[*:1]
150: 15: PASSED. matchedRefRes = 2
150: 
150:  --- UNMATCHED Reference RESULTS: --- 
150:  5: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,C([*:1])[*:2],Cc1c(C(=O)N[*:1])[n+](=O)c2ccccc2n1[O-].OC[*:2]
150:  7: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,O=C(N[*:2])[*:1],Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].OCC[*:2]
150: 14: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,O=C(NCC[*:2])[*:1],Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].O[*:2]
150: 15: Cc1c(C(=O)NCCO)[n+](=O)c2ccccc2n1[O-],ZINC21984717,O=C(NC[*:2])[*:1],Cc1c([*:1])[n+](=O)c2ccccc2n1[O-].OC[*:2]
150:  -----------------------------------
150: 
150: TEST mol: Case1-SIMPLE CC(N1CC1)C(=O) Case1-SIMPLE
150: Time elapsed 0.007835 seconds
150:  1: res= NULL,C[*:1].O=CC(N1CC1)[*:1]
150:  1: PASSED. matchedRefRes = 2
150:  2: res= O=CC([*:1])[*:2],C1CN1[*:2].C[*:1]
150:  2: PASSED. matchedRefRes = 3
150:  3: res= C([*:1])([*:2])[*:3],C1CN1[*:3].C[*:1].O=C[*:2]
150:  3: NOREF. Reference data NOT LISTED in test case.
150:  4: res= C1CN1C([*:1])[*:2],C[*:1].O=C[*:2]
150:  4: PASSED. matchedRefRes = 4
150:  5: res= NULL,C1CN1[*:1].CC(C=O)[*:1]
150:  5: PASSED. matchedRefRes = 5
150:  6: res= CC([*:1])[*:2],C1CN1[*:2].O=C[*:1]
150:  6: NOREF. Reference data NOT LISTED in test case.
150:  7: res= NULL,CC(N1CC1)[*:1].O=C[*:1]
150:  7: PASSED. matchedRefRes = 7
150: 
150:  --- UNMATCHED Reference RESULTS: --- 
150:  1: CC(N1CC1)C(=O),Case1-SIMPLE,C([*:1])([*:2])[*:3],C1CN1[*:2].C[*:1].O=C[*:3]
150:  6: CC(N1CC1)C(=O),Case1-SIMPLE,CC([*:1])[*:2],C1CN1[*:1].O=C[*:2]
150:  -----------------------------------
150: 
150: TEST mol: Case1 Cc1ccccc1NC(=O)[C:7](C)[NH+]1CCCC1 Case1
150: Time elapsed 0.083753 seconds
150:  1: res= NULL,C[*:1].C[C:2](C(=O)Nc1ccccc1[*:1])[NH+]1CCCC1
150:  1: NOREF. Reference data NOT LISTED in test case.
150:  2: res= c1ccc([*:2])c([*:1])c1,C[*:1].C[C:3](C(=O)N[*:2])[NH+]1CCCC1
150:  2: NOREF. Reference data NOT LISTED in test case.
150:  3: res= O=C(Nc1ccccc1[*:1])[*:2],C[*:1].C[C:3]([NH+]1CCCC1)[*:2]
150:  3: NOREF. Reference data NOT LISTED in test case.
150:  4: res= O=C(Nc1ccccc1[*:1])[C:0]([NH+]1CCCC1)[*:2],C[*:1].C[*:2]
150:  4: NOREF. Reference data NOT LISTED in test case.
150:  5: res= O=C(Nc1ccccc1[*:1])[C:0]([*:2])[*:3],C1CC[NH+]([*:3])C1.C[*:1].C[*:2]
150:  5: NOREF. Reference data NOT LISTED in test case.
150:  6: res= C[C:0](C(=O)Nc1ccccc1[*:1])[*:2],C1CC[NH+]([*:2])C1.C[*:1]
150:  6: NOREF. Reference data NOT LISTED in test case.
150:  7: res= NULL,C[C:2](C(=O)N[*:1])[NH+]1CCCC1.Cc1ccccc1[*:1]
150:  7: NOREF. Reference data NOT LISTED in test case.
150:  8: res= O=C(N[*:3])[*:1],C[C:2]([NH+]1CCCC1)[*:1].Cc1ccccc1[*:3]
150:  8: NOREF. Reference data NOT LISTED in test case.
150:  9: res= O=C(N[*:2])[C:0]([NH+]1CCCC1)[*:1],C[*:1].Cc1ccccc1[*:2]
150:  9: NOREF. Reference data NOT LISTED in test case.
150: 10: res= O=C(N[*:3])[C:0]([*:1])[*:2],C1CC[NH+]([*:2])C1.C[*:1].Cc1ccccc1[*:3]
150: 10: NOREF. Reference data NOT LISTED in test case.
150: 11: res= C[C:0](C(=O)N[*:2])[*:1],C1CC[NH+]([*:1])C1.Cc1ccccc1[*:2]
150: 11: NOREF. Reference data NOT LISTED in test case.
150: 12: res= NULL,C[C:2]([NH+]1CCCC1)[*:1].Cc1ccccc1NC(=O)[*:1]
150: 12: NOREF. Reference data NOT LISTED in test case.
150: 13: res= C1CC[NH+]([C:0]([*:1])[*:2])C1,C[*:1].Cc1ccccc1NC(=O)[*:2]
150: 13: NOREF. Reference data NOT LISTED in test case.
150: 14: res= [C:0]([*:1])([*:2])[*:3],C1CC[NH+]([*:3])C1.C[*:1].Cc1ccccc1NC(=O)[*:2]
150: 14: NOREF. Reference data NOT LISTED in test case.
150: 15: res= C[C:0]([*:1])[*:2],C1CC[NH+]([*:2])C1.Cc1ccccc1NC(=O)[*:1]
150: 15: NOREF. Reference data NOT LISTED in test case.
150: 16: res= NULL,C[*:1].Cc1ccccc1NC(=O)[C:2]([NH+]1CCCC1)[*:1]
150: 16: NOREF. Reference data NOT LISTED in test case.
150: 17: res= Cc1ccccc1NC(=O)[C:0]([*:1])[*:2],C1CC[NH+]([*:2])C1.C[*:1]
150: 17: NOREF. Reference data NOT LISTED in test case.
150: 18: res= NULL,C1CC[NH+]([*:1])C1.Cc1ccccc1NC(=O)[C:2](C)[*:1]
150: 18: NOREF. Reference data NOT LISTED in test case.
150: 
150:  --- UNMATCHED Reference RESULTS: --- 
150:  1: Cc1ccccc1NC(=O)[C:7](C)[NH+]1CCCC1,Case1,[*:1][C:7]([*:2])[*:3],C1CC[NH+]([*:3])C1.C[*:2].Cc1ccccc1NC(=O)[*:1]
150:  -----------------------------------
150: 
150: TEST mol: Case2 O=C(OCc1ccccc1)C(O)c1ccccc1 Case2
150: Time elapsed 0.060836 seconds
150:  1: res= NULL,O=C(O[*:1])C(O)c1ccccc1.c1ccc(C[*:1])cc1
150:  1: NOREF. Reference data NOT LISTED in test case.
150:  2: res= C([*:1])[*:2],O=C(O[*:1])C(O)c1ccccc1.c1ccc([*:2])cc1
150:  2: NOREF. Reference data NOT LISTED in test case.
150:  3: res= O=C(O[*:2])[*:1],OC(c1ccccc1)[*:1].c1ccc(C[*:2])cc1
150:  3: NOREF. Reference data NOT LISTED in test case.
150:  4: res= O=C(O[*:1])C(c1ccccc1)[*:2],O[*:2].c1ccc(C[*:1])cc1
150:  4: NOREF. Reference data NOT LISTED in test case.
150:  5: res= O=C(O[*:1])C([*:2])[*:3],O[*:2].c1ccc(C[*:1])cc1.c1ccc([*:3])cc1
150:  5: NOREF. Reference data NOT LISTED in test case.
150:  6: res= O=C(O[*:1])C(O)[*:2],c1ccc(C[*:1])cc1.c1ccc([*:2])cc1
150:  6: NOREF. Reference data NOT LISTED in test case.
150:  7: res= NULL,O=C(OC[*:1])C(O)c1ccccc1.c1ccc([*:1])cc1
150:  7: NOREF. Reference data NOT LISTED in test case.
150:  8: res= O=C(OC[*:2])[*:1],OC(c1ccccc1)[*:1].c1ccc([*:2])cc1
150:  8: NOREF. Reference data NOT LISTED in test case.
150:  9: res= O=C(OC[*:2])C(c1ccccc1)[*:1],O[*:1].c1ccc([*:2])cc1
150:  9: NOREF. Reference data NOT LISTED in test case.
150: 10: res= O=C(OC[*:2])C([*:1])[*:3],O[*:1].c1ccc([*:2])cc1.c1ccc([*:3])cc1
150: 10: NOREF. Reference data NOT LISTED in test case.
150: 11: res= O=C(OC[*:1])C(O)[*:2],c1ccc([*:1])cc1.c1ccc([*:2])cc1
150: 11: NOREF. Reference data NOT LISTED in test case.
150: 12: res= NULL,O=C(OCc1ccccc1)[*:1].OC(c1ccccc1)[*:1]
150: 12: NOREF. Reference data NOT LISTED in test case.
150: 13: res= c1ccc(C([*:1])[*:2])cc1,O=C(OCc1ccccc1)[*:1].O[*:2]
150: 13: NOREF. Reference data NOT LISTED in test case.
150: 14: res= C([*:1])([*:2])[*:3],O=C(OCc1ccccc1)[*:1].O[*:2].c1ccc([*:3])cc1
150: 14: PASSED. matchedRefRes = 1
150: 15: res= OC([*:1])[*:2],O=C(OCc1ccccc1)[*:1].c1ccc([*:2])cc1
150: 15: NOREF. Reference data NOT LISTED in test case.
150: 16: res= NULL,O=C(OCc1ccccc1)C(c1ccccc1)[*:1].O[*:1]
150: 16: NOREF. Reference data NOT LISTED in test case.
150: 17: res= O=C(OCc1ccccc1)C([*:1])[*:2],O[*:1].c1ccc([*:2])cc1
150: 17: NOREF. Reference data NOT LISTED in test case.
150: 18: res= NULL,O=C(OCc1ccccc1)C(O)[*:1].c1ccc([*:1])cc1
150: 18: NOREF. Reference data NOT LISTED in test case.
150: 
150:  --- ALL PASSED --- 
150:  -----------------------------------
150: 5 TEST CASES FAILED 
147/213 Test #150: testMMPA ...............................   Passed    2.29 sec
test 151
        Start 151: pyMMPA

151: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap/testMMPA.py"
151: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap
151: Test timeout computed to be: 1500
146: ...........................................[10:35:16] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:16] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:16] The provided InitialSeed is not an MCS and will be ignored
146: .[10:35:16] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: .[10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: .[10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:17] The provided InitialSeed is not an MCS and will be ignored
146: [10:35:18] The provided InitialSeed is not an MCS and will be ignored
146: .................
146: ----------------------------------------------------------------------
146: Ran 63 tests in 90.116s
146: 
146: OK
151: .........
151: ----------------------------------------------------------------------
151: Ran 9 tests in 22.071s
151: 
151: OK
148/213 Test #146: pyFMCS .................................   Passed   95.97 sec
test 152
        Start 152: testCIPLabeler

152: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/testCIPLabeler
152: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler
152: Test timeout computed to be: 1500
149/213 Test #151: pyMMPA .................................   Passed   27.13 sec
test 153
        Start 153: pyCIPLabelsWrapTest

153: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Wrap/pyCIPLabelWrapTest.py"
153: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/Wrap
153: Test timeout computed to be: 1500
152: [10:35:20] non kekulizable aromatic bond being treated as bond order 1
152: [10:35:20] non kekulizable aromatic bond being treated as bond order 1
152: [10:35:20] non kekulizable aromatic bond being treated as bond order 1
152: [10:35:20] non kekulizable aromatic bond being treated as bond order 1
152: [10:35:20] non kekulizable aromatic bond being treated as bond order 1
152: [10:35:20] non kekulizable aromatic bond being treated as bond order 1
152: ===============================================================================
152: All tests passed (5977 assertions in 13 test cases)
152: 
150/213 Test #152: testCIPLabeler .........................   Passed    2.55 sec
test 154
        Start 154: pyCIPLabelsValidation

154: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/CIPLabeler/Wrap/pyCIPLabelsValidation.py"
154: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CIPLabeler/Wrap
154: Test timeout computed to be: 1500
153: ...
153: ----------------------------------------------------------------------
153: Ran 3 tests in 0.165s
153: 
153: OK
151/213 Test #153: pyCIPLabelsWrapTest ....................   Passed    3.61 sec
test 155
        Start 155: deprotectTest

155: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/deprotectTest
155: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect
155: Test timeout computed to be: 1500
155: ===============================================================================
155: All tests passed (111 assertions in 3 test cases)
155: 
152/213 Test #155: deprotectTest ..........................   Passed    1.41 sec
test 156
        Start 156: pyDeprotect

156: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Deprotect/Wrap/rough_test.py"
156: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Deprotect/Wrap
156: Test timeout computed to be: 1500
129: [10:35:24] UFFTYPER: Unrecognized atom type: S_6+6 (0)
129: [10:35:25] UFFTYPER: Warning: hybridization set to SP3 for atom 0
129: [10:35:25] UFFTYPER: Unrecognized charge state for atom: 0
129: ===============================================================================
129: All tests passed (445 assertions in 9 test cases)
129: 
153/213 Test #129: distGeomHelpersCatch ...................   Passed  1019.13 sec
test 157
        Start 157: testReducedGraphs

157: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/testReducedGraphs
157: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs
157: Test timeout computed to be: 1500
157: Size: 315 [      0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,     0.3,       1,     0.3,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,     0.3,       1,     0.3,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0, ]
157: 
157: Size: 315 [      0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,     0.3,       1,     0.3,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,     0.3,       1,     0.3,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,     0.3,       1,     0.3,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       1,     0.3,     0.3,       1,     0.3,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0,       0, ]
157: 
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157: 
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157: 
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157: 
154/213 Test #157: testReducedGraphs ......................   Passed    0.77 sec
test 158
        Start 158: pyReducedGraphs

158: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap/testReducedGraphs.py"
158: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap
158: Test timeout computed to be: 1500
156: .....
156: ----------------------------------------------------------------------
156: Ran 5 tests in 0.360s
156: 
156: OK
156: Testing tert-butyldimethylsilyl
156: Testing methoxytrityl
156: Testing tetrahydropyranyl
156: Testing methoxymethyl_ether
156: Testing beta-Methoxyethoxymethyl_ether
156: Testing benzyl
156: Testing trimethylsilyl
156: Testing benzoyl
156: Testing pivaloyl
156: Testing triisopropylsilyl
156: Testing acetyl
156: Testing para-methoxybenzyl_ether
156: Testing triphenylmethyl
156: Testing phthaloyl
156: Testing trimethylsilylethoxymethyl
156: Testing para-methoxyphenyl
156: Testing tosyl
156: Testing tert-butyloxycarbonyl
156: Testing trifluoroacetyl
156: Testing benzoyl
156: Testing 9-fluorenylmethyloxycarbonyl
156: Testing benzylamine
156: Testing acetamide
156: Testing carbobenzyloxy
156: Testing Acetal/Ketal
156: Testing tert-butyldimethylsilyl
156: Testing methoxytrityl
156: Testing tetrahydropyranyl
156: Testing methoxymethyl_ether
156: Testing beta-Methoxyethoxymethyl_ether
156: Testing benzyl
156: Testing trimethylsilyl
156: Testing benzoyl
156: Testing pivaloyl
156: Testing triisopropylsilyl
156: Testing acetyl
156: Testing para-methoxybenzyl_ether
156: Testing triphenylmethyl
156: Testing phthaloyl
156: Testing trimethylsilylethoxymethyl
156: Testing para-methoxyphenyl
156: Testing tosyl
156: Testing tert-butyloxycarbonyl
156: Testing trifluoroacetyl
156: Testing benzoyl
156: Testing 9-fluorenylmethyloxycarbonyl
156: Testing benzylamine
156: Testing acetamide
156: Testing carbobenzyloxy
156: Testing Acetal/Ketal
155/213 Test #156: pyDeprotect ............................   Passed    4.02 sec
test 159
        Start 159: trajectoryTest

159: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/trajectoryTest
159: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory
159: Test timeout computed to be: 1500
158: .....
158: ----------------------------------------------------------------------
158: Ran 5 tests in 0.248s
158: 
158: OK
156/213 Test #158: pyReducedGraphs ........................   Passed    3.55 sec
test 160
        Start 160: substructLibraryTest

160: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/substructLibraryTest
160: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary
160: Test timeout computed to be: 1500
160: [10:35:30] -------------------------------------
160: [10:35:30]     Test1
160: [10:35:32]   done
160: [10:35:32] -------------------------------------
160: [10:35:32]     Test2
160: [10:35:34]   done
160: [10:35:35] -------------------------------------
160: [10:35:35]     Test3 (stereo options)
160: [10:35:35]     Done (stereo options)
160: [10:35:35] -------------------------------------
160: [10:35:35]     Test4 (trusted smiles)
157/213 Test #159: trajectoryTest .........................   Passed    6.44 sec
test 161
        Start 161: substructLibraryCatchTest

161: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/substructLibraryCatchTest
161: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary
161: Test timeout computed to be: 1500
160: [10:35:35]     Done (trusted smiles)
160: [10:35:35] -------------------------------------
160: [10:35:35]     Testing C++ docs
160: [10:35:35]     Done (C++ doc tests)
160: [10:35:35] -------------------------------------
160: [10:35:35]     Testing C++ ring query: PatternHolder
160: [10:35:35]     Done (C++ ring query tests)
160: [10:35:35] -------------------------------------
160: [10:35:35]     Testing C++ ring query: TautomerPatternHolder
160: [10:35:35]     Done (C++ ring query tests)
160: [10:35:35] -------------------------------------
160: [10:35:35]    Add Patterns 
161: ===============================================================================
161: All tests passed (111 assertions in 4 test cases)
161: 
158/213 Test #161: substructLibraryCatchTest ..............   Passed    1.13 sec
test 162
        Start 162: pySubstructLibrary

162: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rough_test.py"
162: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap
162: Test timeout computed to be: 1500
128: [10:35:46]   done
160: [10:35:49] -------------------------------------
160: [10:35:49]    testing PatternHolder
160: [10:35:49] -------------------------------------
160: [10:35:49]    testing TautomerPatternHolder
160: [10:35:50] -------------------------------------
160: [10:35:50]    testSegFaultInHolder
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES[10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160:  for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES[10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf for input: 'dsafsdf'
160: '
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'[10:35:50] SMILES
160:  Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf[10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf''
160:  for input: 'dsafsdf'
160: [10:35:50] [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf'[10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf for input: 'dsafsdf'
160: '
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES[10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160:  Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:50] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:50] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf'[10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160:  for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: '[10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdfdsafsdf'
160: 
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: [10:35:51] SMILESdsafsdf
160:  Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'[10:35:51] SMILES
160:  Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf[10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: '
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] SMILES Parse Error: syntax error while parsing: dsafsdf
160: [10:35:51] SMILES Parse Error: Failed parsing SMILES 'dsafsdf' for input: 'dsafsdf'
160: [10:35:51] -------------------------------------
160: [10:35:51]    Results do not depend on numThreads 
162: ......[10:36:06] 
162: 
162: ****
162: Pre-condition Violation
162: RingInfo not initialized
162: Violation occurred on line 52 in file ./Code/GraphMol/RingInfo.cpp
162: Failed Expression: df_init
162: ****
162: 
162: [10:36:06] 
162: 
162: ****
162: Pre-condition Violation
162: RingInfo not initialized
162: Violation occurred on line 129 in file ./Code/GraphMol/RingInfo.cpp
162: Failed Expression: df_init
162: ****
162: 
160: [10:36:17] -------------------------------------
160: [10:36:17]    Results do not depend on numThreads (all same) 
160: [10:36:17] -------------------------------------
160: [10:36:17]    testTautomerQueries
160: [10:36:17] Pattern fingerprints for tautomersearch aren't tautomer fingerprints, ignoring...
160: [10:36:17] -------------------------------------
160: [10:36:17]   github3881 recursive smarts with rings 
159/213 Test #160: substructLibraryTest ...................   Passed   48.05 sec
test 163
        Start 163: testRGroupDecomp

163: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/testRGroupDecomp
163: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition
163: Test timeout computed to be: 1500
162: ............
162: ----------------------------------------------------------------------
162: Ran 18 tests in 40.270s
162: 
162: OK
162: Testing atom rings
162: testing bond rings
162: searching atom rings
162: searching bond rings
162: done
160/213 Test #162: pySubstructLibrary .....................   Passed   43.97 sec
test 164
        Start 164: testRGroupDecompInternals

164: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/testRGroupDecompInternals
164: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition
164: Test timeout computed to be: 1500
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
164: [10:36:20] WARNING: not removing hydrogen atom with dummy atom neighbors
161/213 Test #164: testRGroupDecompInternals ..............   Passed    0.56 sec
test 165
        Start 165: rgroupCatchTests

165: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/rgroupCatchTests
165: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition
165: Test timeout computed to be: 1500
163: [10:36:21] Non terminal R group defined.  To allow set allowNonTerminalRGroups in RGroupDecompositionParameters
163: [10:36:21] WARNING: not removing hydrogen atom with dummy atom neighbors
165: ===============================================================================
165: All tests passed (156 assertions in 11 test cases)
165: 
162/213 Test #165: rgroupCatchTests .......................   Passed    2.20 sec
test 166
        Start 166: pyRGroupDecomposition

166: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/test_rgroups.py"
166: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap
166: Test timeout computed to be: 1500
154: VS001: PASSED
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154: VS084: PASSED
154: VS085: PASSED
154: VS086: PASSED
154: VS087: PASSED
154: VS088: PASSED
154: VS089: PASSED
154: VS090: PASSED
154: VS091: PASSED
154: VS092: PASSED
154: VS093: PASSED
154: VS094: PASSED
154: VS095: PASSED
154: VS096: PASSED
154: VS097: PASSED
154: VS098: PASSED
154: VS099: PASSED
154: VS100: PASSED
154: VS101: PASSED
154: VS102: PASSED
154: VS103: PASSED
154: VS104: PASSED
154: VS105: PASSED
154: VS106: PASSED
154: VS107: PASSED
154: VS108: PASSED
154: VS109: PASSED
154: VS110: PASSED
154: VS111: PASSED
154: VS112: PASSED
154: VS113: PASSED
154: VS114: PASSED
154: VS115: PASSED
154: VS116: PASSED
154: VS117: PASSED
154: VS118: PASSED
154: VS119: PASSED
154: VS120: PASSED
154: VS121: PASSED
154: VS122: PASSED
154: VS123: PASSED
154: VS124: PASSED
154: VS125: PASSED
154: VS126: PASSED
154: VS127: PASSED
154: VS128: PASSED
154: VS129: PASSED
154: VS130: PASSED
154: VS131: PASSED
154: VS132: PASSED
154: VS133: PASSED
154: VS134: PASSED
154: VS135: PASSED
154: VS136: PASSED
154: VS137: PASSED
154: VS138: PASSED
154: VS139: PASSED
154: VS140: PASSED
154: VS141: PASSED
154: VS142: PASSED
154: VS143: PASSED
154: VS144: PASSED
154: VS145: PASSED
154: VS146: PASSED
154: VS147: PASSED
154: VS148: PASSED
154: VS149: PASSED
154: VS150: PASSED
154: VS151: PASSED
154: VS152: PASSED
154: VS153: PASSED
154: VS154: PASSED
154: VS155: PASSED
154: VS156: PASSED
154: VS157: PASSED
154: VS158: PASSED
154: VS159: PASSED
154: VS160: PASSED
154: VS161: PASSED
154: VS162: PASSED
154: VS163: PASSED
154: VS164: PASSED
154: VS165: PASSED
154: VS166: PASSED
154: VS167: PASSED
154: VS168: PASSED
154: VS169: PASSED
154: VS170: PASSED
154: VS171: PASSED
154: VS172: PASSED
154: VS173: PASSED
154: VS174: PASSED
154: VS175: PASSED
154: VS176: PASSED
154: VS177: PASSED
154: VS178: PASSED
154: VS179: PASSED
154: VS180: PASSED
154: VS181: PASSED
154: VS182: PASSED
154: VS183: PASSED
154: VS184: PASSED
154: VS185: PASSED
154: VS186: PASSED
154: VS187: PASSED
154: VS188: PASSED
154: VS189: PASSED
154: VS190: PASSED
154: VS191: PASSED
154: VS192: PASSED
154: VS193: PASSED
154: VS194: PASSED
154: VS195: PASSED
154: VS196: PASSED
154: VS197: PASSED
154: VS198: PASSED
154: VS199: PASSED
154: VS200: PASSED
154: VS201: PASSED
154: VS202: PASSED
154: VS203: PASSED
154: VS204: PASSED
154: VS205: PASSED
154: VS206: PASSED
154: VS207: PASSED
154: VS208: PASSED
154: VS209: PASSED
154: VS210: PASSED
154: VS211: PASSED
154: VS212: PASSED
154: VS213: PASSED
154: VS214: PASSED
154: VS215: PASSED
154: VS216: PASSED
154: VS217: PASSED
154: VS218: PASSED
154: VS219: PASSED
154: VS220: PASSED
154: VS221: PASSED
154: VS222: PASSED
154: VS223: PASSED
154: VS224: PASSED
154: VS225: PASSED
154: VS226: PASSED
154: VS227: PASSED
154: VS228: PASSED
154: VS229: PASSED
154: VS230: PASSED
154: VS231: PASSED
154: VS232: PASSED
154: VS233: PASSED
154: VS234: PASSED
154: VS235: PASSED
154: VS236: PASSED
154: VS237: PASSED
154: VS238: PASSED
154: VS239: PASSED
154: VS240: PASSED
154: VS241: PASSED
154: VS242: PASSED
154: VS243: PASSED
154: VS244: PASSED
154: VS245: PASSED
154: VS246: PASSED
154: VS247: PASSED
154: VS248: PASSED
154: VS249: PASSED
154: VS250: PASSED
154: VS251: PASSED
154: VS252: PASSED
154: VS253: PASSED
154: VS254: PASSED
154: VS255: PASSED
154: VS256: PASSED
154: VS257: PASSED
154: VS258: PASSED
154: VS259: PASSED
154: VS260: PASSED
154: VS261: PASSED
154: VS262: PASSED
154: VS263: PASSED
154: VS264: PASSED
154: VS265: PASSED
154: VS266: PASSED
154: VS267: PASSED
154: VS268: PASSED
154: VS269: PASSED
154: VS270: PASSED
154: VS271: PASSED
154: VS272: PASSED
154: VS273: PASSED
154: VS274: PASSED
154: VS275: PASSED
154: VS276: PASSED
154: VS277: PASSED
154: VS278: PASSED
154: VS279: PASSED
154: VS280: PASSED
154: VS281: PASSED
154: VS282: PASSED
154: VS283: PASSED
154: VS284: PASSED
154: VS285: PASSED
154: VS286: PASSED
154: VS287: PASSED
154: VS288: PASSED
154: VS289: PASSED
154: VS290: PASSED
154: VS291: PASSED
154: VS292: PASSED
154: VS293: PASSED
154: VS294: PASSED
154: VS295: PASSED
154: VS296: PASSED
154: VS297: PASSED
154: VS298: PASSED
154: VS299: PASSED
154: VS300: PASSED
154: Check finished: 0 molecules failed.
154: Failed: 
163/213 Test #154: pyCIPLabelsValidation ..................   Passed   62.79 sec
test 167
        Start 167: molInterchangeTest1

167: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/molInterchangeTest1
167: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange
167: Test timeout computed to be: 1500
167: [10:36:25] test1: basics
167: [10:36:25] done
167: [10:36:25] test2: basic writing
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"name":"mol1 name","atoms":[{"impHs":3},{"impHs":3}],"bonds":[{"atoms":[0,1]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","cipRanks":[0,0]}]}]}
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"name":"test mol","atoms":[{"z":9},{"stereo":"cw"},{"z":17},{"z":8,"impHs":1},{"impHs":3}],"bonds":[{"atoms":[0,1]},{"atoms":[1,2]},{"atoms":[1,3]},{"atoms":[1,4]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","cipRanks":[3,1,4,2,0],"cipCodes":[[1,"S"]]}]}]}
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"name":"test mol","atoms":[{"impHs":1},{"impHs":1},{"impHs":1},{"impHs":1},{"impHs":1},{"impHs":1}],"bonds":[{"bo":2,"atoms":[0,1]},{"atoms":[1,2]},{"bo":2,"atoms":[2,3]},{"atoms":[3,4]},{"bo":2,"atoms":[4,5]},{"atoms":[5,0]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","aromaticAtoms":[0,1,2,3,4,5],"aromaticBonds":[0,1,2,3,4,5],"cipRanks":[0,0,0,0,0,0],"atomRings":[[0,5,4,3,2,1]]}]}]}
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"name":"test mol","atoms":[{"impHs":3},{"impHs":2},{},{},{"z":7,"impHs":2},{"impHs":1},{},{"impHs":3},{"z":7},{"impHs":1}],"bonds":[{"atoms":[0,1]},{"atoms":[1,2]},{"bo":2,"atoms":[2,3]},{"atoms":[3,4]},{"atoms":[3,5]},{"bo":2,"atoms":[5,6]},{"atoms":[6,7]},{"atoms":[6,8]},{"bo":2,"atoms":[8,9]},{"atoms":[9,2]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","aromaticAtoms":[2,3,5,6,8,9],"aromaticBonds":[2,4,5,7,8,9],"cipRanks":[0,2,4,5,8,3,7,1,9,6],"atomRings":[[2,9,8,6,5,3]]}]}]}
167: [10:36:25] done
167: [10:36:25] test3: writing conformers
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"name":"example 2","atoms":[{"z":8},{"stereo":"cw"},{"z":17,"isotope":35},{"z":9},{"z":1},{"z":1}],"bonds":[{"atoms":[0,1]},{"atoms":[1,2]},{"atoms":[1,3]},{"atoms":[0,4]},{"atoms":[1,5]}],"conformers":[{"dim":2,"coords":[[-1.1987,-0.0452],[-0.3332,0.4555],[0.1659,1.322],[0.5332,-0.0438],[-2.0652,0.4541],[-0.8339,1.3212]]},{"dim":3,"coords":[[0.9553,-0.3743,-0.4679],[-0.3616,-0.131,-0.0794],[-0.5097,1.6255,0.1705],[-0.5778,-0.7919,1.1042],[1.5276,0.1063,0.1627],[-1.0339,-0.4345,-0.8902]]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","cipCodes":[[1,"S"]]},{"name":"partialCharges","generator":"RDKit","formatVersion":10,"generatorVersion":"2023.03.3","values":[-0.352,0.273,-0.055,-0.198,0.215,0.117]}]}]}
167: [10:36:25] done
167: [10:36:25] test4: writing properties
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"atoms":[{"impHs":3},{"impHs":3}],"bonds":[{"atoms":[0,1]}],"properties":{"foo_string":"bar","foo_int":1,"foo_double":1.2},"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","cipRanks":[0,0]}]}]}
167: [10:36:25] done
167: [10:36:25] test5: writing partial charges
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"atoms":[{"impHs":3},{"z":8,"impHs":1}],"bonds":[{"atoms":[0,1]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","cipRanks":[0,1]},{"name":"partialCharges","generator":"RDKit","formatVersion":10,"generatorVersion":"2023.03.3","values":[0.5,-0.5]}]}]}
167: [10:36:25] testing parse options
167: [10:36:25] done
167: [10:36:25] testing github #2046: CIPRank values from JSONDataToMols are not unsigned
167: {"rdkitjson":{"version":11},"defaults":{"atom":{"z":6,"impHs":0,"chg":0,"nRad":0,"isotope":0,"stereo":"unspecified"},"bond":{"bo":1,"stereo":"unspecified"}},"molecules":[{"name":"test mol","atoms":[{"impHs":2},{"impHs":2},{"impHs":2},{"z":8},{"impHs":1,"stereo":"cw"},{"z":9}],"bonds":[{"atoms":[0,1]},{"atoms":[1,2]},{"atoms":[2,3]},{"atoms":[3,4]},{"atoms":[4,5]},{"atoms":[4,0]}],"extensions":[{"name":"rdkitRepresentation","formatVersion":2,"toolkitVersion":"2023.03.3","cipRanks":[1,0,2,4,3,5],"cipCodes":[[4,"S"]],"atomRings":[[0,1,2,3,4]]}]}]}
167: [10:36:25] done
167: [10:36:25] testing 'either' stereochemistry
167: [10:36:25] done
164/213 Test #167: molInterchangeTest1 ....................   Passed    0.25 sec
test 168
        Start 168: molInterchangeCatchTest

168: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/molInterchangeCatchTest
168: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange
168: Test timeout computed to be: 1500
168: [10:36:25]  unrecognized bond type 12 set to zero while writing
168: [10:36:25]  unrecognized bond type 0 set to zero while writing
168: ===============================================================================
168: All tests passed (115 assertions in 4 test cases)
168: 
165/213 Test #168: molInterchangeCatchTest ................   Passed    0.34 sec
test 169
        Start 169: pyMolInterchange

169: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap/testMolInterchange.py"
169: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap
169: Test timeout computed to be: 1500
169: ..
169: ----------------------------------------------------------------------
169: Ran 2 tests in 0.098s
169: 
169: OK
166/213 Test #169: pyMolInterchange .......................   Passed    1.94 sec
test 170
        Start 170: testSLNParse

170: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/testSLNParse
170: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse
170: Test timeout computed to be: 1500
170: [10:36:27] SLN Parse Error: syntax error while parsing: CH4[I=13]
170: [10:36:27] Failed parsing SLN 'CH4[I=13]'
170: [10:36:27] SLN Parser error: Atom ID 1 appears *after* its ring closure.
170: [10:36:27] SLN Parser error: Ring closure 1 does not have a corresponding opener.
170: [10:36:27] SLN Parse Error: syntax error while parsing: CH2(C@1H2)CH2(CH2CH2C[1]H2)
170: [10:36:27] Failed parsing SLN 'CH2(C@1H2)CH2(CH2CH2C[1]H2)'
170: [10:36:27] SLN Parse Error: syntax error while parsing: CH2(CH2[1])CH2(CH2CH2CH2@1)
170: [10:36:27] Failed parsing SLN 'CH2(CH2[1])CH2(CH2CH2CH2@1)'
170: [10:36:27] SLN Parse Error: syntax error while parsing: CH4	fff
170: [10:36:27] Failed parsing SLN 'CH4	fff'
170: [10:36:27] SLN Parse Error: syntax error while parsing: C[charge=+1] 	foo
170: [10:36:27] Failed parsing SLN 'C[charge=+1] 	foo'
170: [10:36:27] Query property 'is' ignored on non-query atom
170: [10:36:27] Query property 'is' ignored on non-query atom
167/213 Test #170: testSLNParse ...........................   Passed    0.33 sec
test 171
        Start 171: pySLNParse

171: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap/testSLN.py"
171: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap
171: Test timeout computed to be: 1500
171: ..
171: ----------------------------------------------------------------------
171: Ran 2 tests in 0.170s
171: 
171: OK
168/213 Test #171: pySLNParse .............................   Passed    2.41 sec
test 172
        Start 172: pyGraphMolWrap

172: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rough_test.py"
172: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
172: Test timeout computed to be: 1500
172: ..............[10:36:36] SMARTS Parse Error: syntax error while parsing: fiib
172: [10:36:36] SMARTS Parse Error: Failed parsing SMARTS 'fiib' for input: 'fiib'
172: ....[10:36:36] ERROR: Problems encountered parsing data fields
172: [10:36:36] ERROR: moving to the beginning of the next molecule
172: [10:36:36] ERROR: Problems encountered parsing data fields
172: [10:36:36] ERROR: moving to the beginning of the next molecule
172: [10:36:36] Spurious data before the first property will be ignored
172: [10:36:36] Property <ID> will be truncated after the first blank line
172: [10:36:36] Property <ID> will be truncated after the first blank line
172: [10:36:36] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
172: [10:36:36] ERROR: Problems encountered parsing data fields
172: [10:36:36] ERROR: moving to the beginning of the next molecule
172: [10:36:36] ERROR: Problems encountered parsing data fields
172: [10:36:36] ERROR: moving to the beginning of the next molecule
172: [10:36:36] Spurious data before the first property will be ignored
172: [10:36:36] Property <ID> will be truncated after the first blank line
172: [10:36:36] Property <ID> will be truncated after the first blank line
172: [10:36:36] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
172: [10:36:36] ERROR: Problems encountered parsing data fields
172: [10:36:36] ERROR: moving to the beginning of the next molecule
172: [10:36:36] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
172: [10:36:36] ERROR: Problems encountered parsing data fields
172: [10:36:36] ERROR: moving to the beginning of the next molecule
172: [10:36:36] Property <ANOTHER_PROPERTY> will be truncated after the first blank line
172: .[10:36:36] SMILES Parse Error: syntax error while parsing: fail
172: [10:36:36] SMILES Parse Error: Failed parsing SMILES 'fail' for input: 'fail'
172: [10:36:36] ERROR: Smiles parse error on line 2
172: [10:36:36] ERROR: Cannot create molecule from : 'fail'
172: >>> This may result in an infinite loop.  It should finish almost instantly
172: <<< OK, it finished.
172: ............[10:36:36] Explicit valence for atom # 1 C, 5, is greater than permitted
172: ............[10:36:37] non-ring atom 0 marked aromatic
172: [10:36:37] non-ring atom 0 marked aromatic
172: [10:36:37] 
172: 
172: ****
172: Range Error
172: idx
172: Violation occurred on line 213 in file ./Code/GraphMol/ROMol.cpp
172: Failed Expression: 12 < 6
172: ****
172: 
172: [10:36:37] non-ring atom 0 marked aromatic
172: [10:36:37] non-ring atom 0 marked aromatic
172: [10:36:37] 
172: 
172: ****
172: Range Error
172: idx
172: Violation occurred on line 213 in file ./Code/GraphMol/ROMol.cpp
172: Failed Expression: 12 < 6
172: ****
172: 
172: ...............[10:36:37] WARNING: the onlyHeavy argument to mol.GetNumAtoms() has been deprecated. Please use the onlyExplicit argument instead or mol.GetNumHeavyAtoms() if you want the heavy atom count.
172: [10:36:37] WARNING: the onlyHeavy argument to mol.GetNumAtoms() has been deprecated. Please use the onlyExplicit argument instead or mol.GetNumHeavyAtoms() if you want the heavy atom count.
172: ..............[10:36:39] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
172: [10:36:39] Explicit valence for atom # 1 C, 5, is greater than permitted
166: ...............
166: ----------------------------------------------------------------------
166: Ran 15 tests in 14.330s
166: 
166: OK
169/213 Test #166: pyRGroupDecomposition ..................   Passed   16.89 sec
test 173
        Start 173: pyTestConformerWrap

173: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/testConformer.py"
173: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
173: Test timeout computed to be: 1500
173: ......
173: ----------------------------------------------------------------------
173: Ran 6 tests in 0.258s
173: 
173: OK
170/213 Test #173: pyTestConformerWrap ....................   Passed    3.87 sec
test 174
        Start 174: pyTestTrajectory

174: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/testTrajectory.py"
174: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
174: Test timeout computed to be: 1500
163: iterative
174: [10:36:47] 
174: 
174: ****
174: Pre-condition Violation
174: from must be < size()
174: Violation occurred on line 91 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: from < static_cast<int>(size())
174: ****
174: 
174: .[10:36:47] 
174: 
174: ****
174: Pre-condition Violation
174: from must be < size()
174: Violation occurred on line 91 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: from < static_cast<int>(size())
174: ****
174: 
174: .[10:36:51] 
174: 
174: ****
174: Range Error
174: snapshotNum
174: Violation occurred on line 71 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: 0 < 0
174: ****
174: 
174: .[10:36:51] 
174: 
174: ****
174: Pre-condition Violation
174: The trajectory must have dimension == 3
174: Violation occurred on line 113 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: traj.dimension() == 3
174: ****
174: 
174: ..[10:36:51] 
174: 
174: ****
174: Pre-condition Violation
174: The trajectory must have dimension == 3
174: Violation occurred on line 154 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: traj.dimension() == 3
174: ****
174: 
174: .[10:36:51] 
174: 
174: ****
174: Pre-condition Violation
174: d_pos must not be NULL
174: Violation occurred on line 23 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: d_pos
174: ****
174: 
174: [10:36:51] 
174: 
174: ****
174: Pre-condition Violation
174: d_trajectory must not be NULL
174: Violation occurred on line 24 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: d_trajectory
174: ****
174: 
174: .[10:36:51] 
174: 
174: ****
174: Range Error
174: snapshotNum
174: Violation occurred on line 71 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: 5 < 5
174: ****
174: 
174: [10:36:51] 
174: 
174: ****
174: Range Error
174: pointNum
174: Violation occurred on line 27 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: 10 < 10
174: ****
174: 
174: .[10:36:51] 
174: 
174: ****
174: Range Error
174: snapshotNum
174: Violation occurred on line 71 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: 5 < 5
174: ****
174: 
174: [10:36:51] 
174: 
174: ****
174: Pre-condition Violation
174: d_dimension must be == 2
174: Violation occurred on line 25 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: d_trajectory->dimension() == 2
174: ****
174: 
174: [10:36:51] 
174: 
174: ****
174: Pre-condition Violation
174: d_dimension must be == 2
174: Violation occurred on line 25 in file ./Code/GraphMol/Trajectory/Trajectory.cpp
174: Failed Expression: d_trajectory->dimension() == 2
174: ****
174: 
174: .
174: ----------------------------------------------------------------------
174: Ran 9 tests in 3.889s
174: 
174: OK
174: Testing Trajectory wrapper
171/213 Test #174: pyTestTrajectory .......................   Passed    7.77 sec
test 175
        Start 175: pyTestSGroups

175: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/testSGroups.py"
175: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
175: Test timeout computed to be: 1500
128: CNC[C@H]1CC[C@H](C[NH3+])CC1
175: .............
175: ----------------------------------------------------------------------
175: Ran 13 tests in 0.258s
175: 
175: OK
175: Testing SubstanceGroups wrapper
172/213 Test #175: pyTestSGroups ..........................   Passed    2.41 sec
test 176
        Start 176: pyTestThreads

176: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/testThreads.py"
176: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
176: Test timeout computed to be: 1500
163: bulk
176: [10:36:55] Warning: molecule is tagged as 3D, but all Z coords are zero
173/213 Test #176: pyTestThreads ..........................   Passed    2.74 sec
test 177
        Start 177: pyTestMultithreadedMolSupplier

177: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/testMultithreadedMolSupplier.py"
177: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
177: Test timeout computed to be: 1500
177: .s.
177: ----------------------------------------------------------------------
177: Ran 3 tests in 0.638s
177: 
177: OK (skipped=1)
177: Testing Smiles and SD MultithreadedMolSupplier
174/213 Test #177: pyTestMultithreadedMolSupplier .........   Passed    2.78 sec
test 178
        Start 178: pyTestPropertyLists

178: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/testPropertyLists.py"
178: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
178: Test timeout computed to be: 1500
178: [10:37:01] Value [?] for property atom.iprop.PartiallyMissingInt of atom 0 can not be parsed. Ignoring it.
178: [10:37:01] Value ? for property atom.iprop.PartiallyMissingInt of atom 3 can not be parsed. Ignoring it.
178: [10:37:01] Value $$$$ for property atom.iprop.PartiallyMissingInt of atom 4 can not be parsed. Ignoring it.
178: .[10:37:01] Value [?] for property atom.iprop.PartiallyMissingInt of atom 0 can not be parsed. Ignoring it.
178: [10:37:01] Value ? for property atom.iprop.PartiallyMissingInt of atom 3 can not be parsed. Ignoring it.
178: [10:37:01] Value $$$$ for property atom.iprop.PartiallyMissingInt of atom 4 can not be parsed. Ignoring it.
178: ..[10:37:01] Value [?] for property atom.iprop.PartiallyMissingInt of atom 0 can not be parsed. Ignoring it.
178: [10:37:01] Value ? for property atom.iprop.PartiallyMissingInt of atom 3 can not be parsed. Ignoring it.
178: [10:37:01] Value $$$$ for property atom.iprop.PartiallyMissingInt of atom 4 can not be parsed. Ignoring it.
178: .
178: ----------------------------------------------------------------------
178: Ran 4 tests in 0.105s
178: 
178: OK
163: bulk, no symmetry
175/213 Test #178: pyTestPropertyLists ....................   Passed    2.08 sec
test 179
        Start 179: pyCDXMLTest

179: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/test_cdxml.py"
179: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap
179: Test timeout computed to be: 1500
179: .
179: ----------------------------------------------------------------------
179: Ran 1 test in 0.093s
179: 
179: OK
176/213 Test #179: pyCDXMLTest ............................   Passed    2.44 sec
test 180
        Start 180: molStandardizeTest

180: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molStandardizeTest
180: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
180: Test timeout computed to be: 1500
163: [10:37:08] Relabelling existing label
163: Best mapping
177/213 Test #163: testRGroupDecomp .......................   Passed   53.39 sec
test 181
        Start 181: molNormalizeTest

181: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molNormalizeTest
181: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
181: Test timeout computed to be: 1500
181: [10:37:11] Can't kekulize mol.  Unkekulized atoms: 3 7 8 9
128: C1=NC[C@]2(CN3CC[C@@H]2C3)O1
181: [10:37:12] Initializing Normalizer
181: [10:37:12] Running Normalizer
181: [10:37:12] Rule applied: BrokenazidetoN=N+=N-
181: [10:37:12] Initializing Normalizer
181: [10:37:12] Running Normalizer
181: [10:37:12] Initializing Normalizer
181: [10:37:12] Running Normalizer
178/213 Test #181: molNormalizeTest .......................   Passed    1.10 sec
test 182
        Start 182: molValidateTest

182: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molValidateTest
182: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
182: Test timeout computed to be: 1500
179/213 Test #182: molValidateTest ........................   Passed    0.47 sec
test 183
        Start 183: molChargeTest

183: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molChargeTest
183: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
183: Test timeout computed to be: 1500
180/213 Test #180: molStandardizeTest .....................   Passed    9.43 sec
test 184
        Start 184: molTautomerTest

184: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molTautomerTest
184: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
184: Test timeout computed to be: 1500
181/213 Test #183: molChargeTest ..........................   Passed    0.88 sec
test 185
        Start 185: molStandardizeSmallTest

185: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molStandardizeSmallTest
185: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
185: Test timeout computed to be: 1500
182/213 Test #185: molStandardizeSmallTest ................   Passed    0.36 sec
test 186
        Start 186: molFragmentTest

186: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molFragmentTest
186: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
186: Test timeout computed to be: 1500
186: [10:37:14] SMARTS Parse Error: syntax error while parsing: [Cl
186: [10:37:14] SMARTS Parse Error: Failed parsing SMARTS '[Cl' for input: '[Cl'
183/213 Test #186: molFragmentTest ........................   Passed    0.49 sec
test 187
        Start 187: molStandardizeCatchTest

187: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/molStandardizeCatchTest
187: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize
187: Test timeout computed to be: 1500
128: O=C(O)[C@@H]1[C@H](C(=O)O)[C@H]2CC[C@@H]1O2
187:  * - * - * - * m1
187:  * - * - * - * m2
187:  * - * - * - * m1
187:  * - * - * - * m2
172: ...........................[10:37:16]  unable to set wavy bonds for double bonds: 3
187: [10:37:16] Can't kekulize mol.  Unkekulized atoms: 3 7
187: [10:37:16] Can't kekulize mol.  Unkekulized atoms: 3 8
187: [10:37:16] Can't kekulize mol.  Unkekulized atoms: 2 3 4
187: ===============================================================================
187: All tests passed (240 assertions in 36 test cases)
187: 
184/213 Test #187: molStandardizeCatchTest ................   Passed    2.12 sec
test 188
        Start 188: pyMolStandardize

188: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/testMolStandardize.py"
188: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap
188: Test timeout computed to be: 1500
172: .........[10:37:16] 
172: 
172: ****
172: Range Error
172: idx
172: Violation occurred on line 213 in file ./Code/GraphMol/ROMol.cpp
172: Failed Expression: 6 < 5
172: ****
172: 
128: O=C(CCc1ccccc1)OC[C@H]1C[C@@H]2O[C@H]1[C@H]1C(=O)OC(=O)[C@H]12
184: [10:37:19] Tautomer enumeration stopped at 292 tautomers: max transforms reached
188: .....[10:37:23] Tautomer enumeration stopped at 292 tautomers: max transforms reached
184: [10:37:23] Tautomer enumeration stopped at 292 tautomers: max transforms reached
188: [10:37:23] Tautomer enumeration stopped at 50 tautomers: max tautomers reached
184: [10:37:24] Tautomer enumeration stopped at 50 tautomers: max tautomers reached
188: .[10:37:25] Tautomer enumeration stopped at 11 tautomers: canceled
188: Enumeration was canceled due to timeout (50 ms)
184: [10:37:25] Tautomer enumeration stopped at 11 tautomers: canceled
184: Enumeration was canceled due to timeout (50 ms)
128: Cn1cc(C2=NC[C@]3(CN4CC[C@@H]3C4)O2)c2ccccc21
172: ...................[10:37:30] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:37:30] Explicit valence for atom # 6 F, 2, is greater than permitted
172: [10:37:30] Can't kekulize mol.  Unkekulized atoms: 3 4 5
172: .[10:37:30] Warning: molecule is tagged as 3D, but all Z coords are zero
172: [10:37:30] Warning: molecule is tagged as 3D, but all Z coords are zero
172: [10:37:30] Warning: molecule is tagged as 3D, but all Z coords are zero
172: [10:37:31] Warning: molecule is tagged as 3D, but all Z coords are zero
172: [10:37:31] Warning: molecule is tagged as 3D, but all Z coords are zero
172: [10:37:31] Warning: molecule is tagged as 3D, but all Z coords are zero
184: 375
184: Enumeration has completed
184: [10:37:32] Tautomer enumeration stopped at 14 tautomers: canceled
188: [10:37:35] Tautomer enumeration stopped at 367 tautomers: canceled
188: Enumeration was canceled due to timeout (10 s)
188: [10:37:35] Tautomer enumeration stopped at 11 tautomers: canceled
184: CN=c1cc[nH]cn1
184: CN=c1ccnc[nH]1
184: CNc1ccncn1
184: res: CNc1ccncn1
184: CN=c1cccc[nH]1
184: CNc1ccccn1
184: res: CNc1ccccn1
185/213 Test #184: molTautomerTest ........................   Passed   24.27 sec
test 189
        Start 189: testScaffoldNetwork

189: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/testScaffoldNetwork
189: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork
189: Test timeout computed to be: 1500
188: ...............[10:37:37] Explicit valence for atom # 1 O, 3, is greater than permitted
188: .
188: ----------------------------------------------------------------------
188: Ran 22 tests in 18.970s
188: 
188: OK
188: done
186/213 Test #188: pyMolStandardize .......................   Passed   21.58 sec
test 190
        Start 190: pyScaffoldNetwork

190: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap/testScaffoldNetwork.py"
190: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap
190: Test timeout computed to be: 1500
190: .......
190: ----------------------------------------------------------------------
190: Ran 7 tests in 0.339s
190: 
190: OK
187/213 Test #190: pyScaffoldNetwork ......................   Passed    2.22 sec
test 191
        Start 191: pyScaffoldNetworkPickling

191: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap/testPickleScaffoldNetwork.py"
191: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap
191: Test timeout computed to be: 1500
128: Nc1ncnc2c1ncn2[C@@H]1C=C(CO)[C@@H](O)[C@H]1O
191: .
191: ----------------------------------------------------------------------
191: Ran 1 test in 0.110s
191: 
191: OK
188/213 Test #191: pyScaffoldNetworkPickling ..............   Passed    1.93 sec
test 192
        Start 192: testMolEnumerator

192: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/testMolEnumerator
192: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator
192: Test timeout computed to be: 1500
192: [10:37:43] can only enumerate SRUs with CONNECT=HT or CONNECT=HH
192: ===============================================================================
192: All tests passed (265 assertions in 14 test cases)
192: 
189/213 Test #192: testMolEnumerator ......................   Passed    0.86 sec
test 193
        Start 193: pyMolEnumerator

193: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/MolEnumerator/Wrap/rough_test.py"
193: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolEnumerator/Wrap
193: Test timeout computed to be: 1500
193: ...
193: ----------------------------------------------------------------------
193: Ran 3 tests in 0.110s
193: 
193: OK
190/213 Test #193: pyMolEnumerator ........................   Passed    1.92 sec
test 194
        Start 194: testAbbreviations

194: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/testAbbreviations
194: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations
194: Test timeout computed to be: 1500
128: CO[C@H]1[C@@H](N)[C@@H](O)[C@@H](O)[C@H]1O
194: [10:37:45] SMARTS Parse Error: syntax error while parsing: *fail
194: [10:37:45] SMARTS Parse Error: Failed parsing SMARTS '*fail' for input: '*fail'
194: [10:37:45] no suitable SubstanceGroups found
194: ===============================================================================
194: All tests passed (195 assertions in 12 test cases)
194: 
191/213 Test #194: testAbbreviations ......................   Passed    0.45 sec
test 195
        Start 195: pyAbbreviations

195: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/GraphMol/Abbreviations/Wrap/testAbbreviations.py"
195: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Abbreviations/Wrap
195: Test timeout computed to be: 1500
189: ===============================================================================
189: All tests passed (266 assertions in 18 test cases)
189: 
192/213 Test #189: testScaffoldNetwork ....................   Passed    9.08 sec
test 196
        Start 196: testQuery

196: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/testQuery
196: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query
196: Test timeout computed to be: 1500
196: Query
196: Query2
196: Equality
196: Greater
196: GreaterEqual
196: Less
196: LessEqual
196: Open Range
196: Closed Range
196: Float
196: With Tolerance
196: Set
196: And
196: Or
196: XOr
196: pointer and copy foo
196: Set2
193/213 Test #196: testQuery ..............................   Passed    0.09 sec
test 197
        Start 197: testMatCalc

197: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/testMatCalc
197: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc
197: Test timeout computed to be: 1500
197: 1.68022e+08
197: 1.73149e+08
197: 1.05549e+08
197: 7.20603e+07
197: 1.41535e+08
197: 1.08592e+08
197: 1.11334e+08
197: 2.05553e+08
197: 1.54962e+08
197: 8.08231e+07
197: 5.61421e+07
197: 1.28874e+08
197: 1.59011e+08
197: 8.69902e+07
197: 1.31367e+08
197: 2.27389e+08
197: 1.60289e+08
197: 7.79813e+07
197: 1.61001e+08
197: 2.07599e+08
197: 2.24432e+08
197: 1.39725e+08
197: 2.42614e+08
197: 1.77578e+08
197: 1.05908e+08
197: 9.06742e+07
197: 1.8087e+08
197: 1.98182e+08
197: 2.03052e+08
197: 1.7673e+08
197: 9.32798e+07
197: 1.37969e+08
197: 1.83778e+08
197: 2.1228e+08
197: 5.06157e+07
197: 1.566e+08
197: 2.37142e+08
197: 1.49345e+08
197: 7.05819e+07
197: 1.71633e+08
197: 1.96817e+08
197: 2.18246e+08
197: 9.49496e+07
197: 2.25618e+08
197: 1.30219e+08
194/213 Test #197: testMatCalc ............................   Passed    0.05 sec
test 198
        Start 198: pyMatCalc

198: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/testMatricCalc.py"
198: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap
198: Test timeout computed to be: 1500
128: CO[C@@H]1[C@@H](N)[C@@H](O)[C@@H](O)[C@H]1O
195: .......
195: ----------------------------------------------------------------------
195: Ran 7 tests in 0.174s
195: 
195: OK
195/213 Test #195: pyAbbreviations ........................   Passed    2.10 sec
test 199
        Start 199: testSimDivPickers

199: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/testSimDivPickers
199: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers
199: Test timeout computed to be: 1500
199: [10:37:47] -------------------------------------
199: [10:37:47] Testing github issue 1421: MaxMinPicker picking non-existent element.
199: [10:37:47] Done
199: [10:37:47] -------------------------------------
199: [10:37:47] Testing github issue 2245: MinMax Diversity picker seeding shows deterministic / non-random behaviour.
199: [10:37:47] Done
196/213 Test #199: testSimDivPickers ......................   Passed    0.11 sec
test 200
        Start 200: pickersTestsCatch

200: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/pickersTestsCatch
200: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers
200: Test timeout computed to be: 1500
200: ===============================================================================
200: All tests passed (21267 assertions in 1 test case)
200: 
197/213 Test #200: pickersTestsCatch ......................   Passed    0.69 sec
test 201
        Start 201: pySimDivPickers

201: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/testPickers.py"
201: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap
201: Test timeout computed to be: 1500
128: CCS[C@@H]1[C@@H](N)[C@@H](O)[C@@H](O)[C@H]1O
201: [10:37:50] the useCache argument is deprecated and ignored
201: ...[10:37:51] the useCache argument is deprecated and ignored
198: .....
198: ----------------------------------------------------------------------
198: Ran 5 tests in 2.775s
198: 
198: OK
201: [10:37:51] the useCache argument is deprecated and ignored
201: .[10:37:51] the useCache argument is deprecated and ignored
128: CCCCC[C@H](O)/C=C/[C@@]1(F)[C@H](O)C[C@H](O)[C@@H]1C/C=C\CCCC(=O)OC
198/213 Test #198: pyMatCalc ..............................   Passed    4.53 sec
test 202
        Start 202: pyRanker

202: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/testRanker.py"
202: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap
202: Test timeout computed to be: 1500
202: ..[10:37:53] 
202: 
202: ****
202: Invariant Violation
202: Can't rank more bits than the ensemble size
202: Violation occurred on line 156 in file ./Code/ML/InfoTheory/InfoBitRanker.cpp
202: Failed Expression: num <= dp_maskBits->getNumOnBits()
202: ****
202: 
202: ...
202: ----------------------------------------------------------------------
202: Ran 5 tests in 0.163s
202: 
202: OK
199/213 Test #202: pyRanker ...............................   Passed    1.82 sec
test 203
        Start 203: testChemicalFeatures

203: Test command: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/testChemicalFeatures
203: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures
203: Test timeout computed to be: 1500
203: -----------------------------------------
203: Test1
203: Done
200/213 Test #203: testChemicalFeatures ...................   Passed    0.03 sec
test 204
        Start 204: pyFeatures

204: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/testFeatures.py"
204: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap
204: Test timeout computed to be: 1500
204: ..
204: ----------------------------------------------------------------------
204: Ran 2 tests in 0.006s
204: 
204: OK
204: Testing ChemicalFeatures Wrapper code:
201/213 Test #204: pyFeatures .............................   Passed    1.77 sec
test 205
        Start 205: pythonTestDbCLI

205: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/Projects/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/Projects"
205: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Projects
205: Test timeout computed to be: 1500
172: ...............[10:37:55] 
172: 
172: ****
172: Pre-condition Violation
172: no owner
172: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
172: Failed Expression: dp_mol
172: ****
172: 
172: [10:37:55] 
172: 
172: ****
172: Pre-condition Violation
172: no owner
172: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
172: Failed Expression: dp_mol
172: ****
172: 
172: [10:37:55] 
172: 
172: ****
172: Pre-condition Violation
172: no owner
172: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
172: Failed Expression: dp_mol
172: ****
172: 
172: [10:37:55] 
172: 
172: ****
172: Pre-condition Violation
172: no owner
172: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
172: Failed Expression: dp_mol
172: ****
172: 
172: [10:37:55] 
172: 
172: ****
172: Pre-condition Violation
172: no owner
172: Violation occurred on line 138 in file ./Code/GraphMol/Atom.h
172: Failed Expression: dp_mol
172: ****
172: 
172: .....[10:37:55] 
172: 
172: ****
172: Range Error
172: atomIdx1
172: Violation occurred on line 377 in file ./Code/GraphMol/RWMol.cpp
172: Failed Expression: 0 < 0
172: ****
172: 
172: ......[10:37:56] SMILES Parse Error: unclosed ring for input: 'c1ccccc'
172: [10:37:56] ERROR: Smiles parse error on line 0
172: [10:37:56] ERROR: Cannot create molecule from : 'c1ccccc'
172: [10:37:56] SMILES Parse Error: extra open parentheses for input: 'C(C'
172: [10:37:56] ERROR: Smiles parse error on line 3
172: [10:37:56] ERROR: Cannot create molecule from : 'C(C'
172: [10:37:56] Explicit valence for atom # 1 C, 5, is greater than permitted
172: [10:37:56] ERROR: Could not sanitize molecule on line 6
172: [10:37:56] ERROR: Explicit valence for atom # 1 C, 5, is greater than permitted
172: [10:37:56] SMILES Parse Error: unclosed ring for input: 'c1ccccc'
172: [10:37:56] ERROR: Smiles parse error on line 0
172: [10:37:56] ERROR: Cannot create molecule from : 'c1ccccc'
172: [10:37:56] SMILES Parse Error: extra open parentheses for input: 'C(C'
172: [10:37:56] ERROR: Smiles parse error on line 3
172: [10:37:56] ERROR: Cannot create molecule from : 'C(C'
172: [10:37:56] SMILES Parse Error: unclosed ring for input: 'C1C(Cl)CCCC'
172: [10:37:56] ERROR: Smiles parse error on line 6
172: [10:37:56] ERROR: Cannot create molecule from : 'C1C(Cl)CCCC'
172: [10:37:56] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:37:56] ERROR: Could not sanitize molecule ending on line 21
172: [10:37:56] ERROR: Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:37:56] ERROR: EOF hit while reading atoms
172: [10:37:56] ERROR: moving to the beginning of the next molecule
172: [10:37:56] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:37:56] ERROR: Could not sanitize molecule ending on line 21
172: [10:37:56] ERROR: Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:37:56] ERROR: EOF hit while reading atoms
172: [10:37:56] ERROR: moving to the beginning of the next molecule
172: ....[10:37:56] 
172: 
172: ****
172: Pre-condition Violation
172: RingInfo not initialized
172: Violation occurred on line 169 in file ./Code/GraphMol/RingInfo.cpp
172: Failed Expression: df_init
172: ****
172: 
172: ........[10:37:56] 
172: 
172: ****
172: Range Error
172: idx
172: Violation occurred on line 213 in file ./Code/GraphMol/ROMol.cpp
172: Failed Expression: 3 < 1
172: ****
172: 
172: ..[10:37:56] Can't kekulize mol.  Unkekulized atoms: 0 1 2 3 4
172: ........................[10:37:57] SMILES Parse Error: unclosed ring for input: 'C1CC'
172: ......[10:37:57] WARNING: not removing hydrogen atom without neighbors
172: [10:37:57] WARNING: not removing hydrogen atom with dummy atom neighbors
172: [10:37:57] WARNING: not removing hydrogen atom with wedged bond
172: [10:37:57] WARNING: not removing hydrogen atom without neighbors
172: [10:37:57] WARNING: not removing hydrogen atom with dummy atom neighbors
201: .......
201: ----------------------------------------------------------------------
201: Ran 11 tests in 10.725s
201: 
201: OK
202/213 Test #201: pySimDivPickers ........................   Passed   12.42 sec
test 206
        Start 206: pythonTestDirRoot

206: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit"
206: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
206: Test timeout computed to be: 1500
172: .....[10:38:03] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:38:03] Can't kekulize mol.  Unkekulized atoms: 0 1 2
172: .[10:38:03] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:38:03] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:38:03] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:38:03] Explicit valence for atom # 1 F, 2, is greater than permitted
172: [10:38:03] Can't kekulize mol.  Unkekulized atoms: 0 1 2
172: [10:38:03] Can't kekulize mol.  Unkekulized atoms: 0 1 2
172: [10:38:03] Can't kekulize mol.  Unkekulized atoms: 0 1 2
172: ..........[10:38:03] SMARTS Parse Error: syntax error while parsing: CCC |$foo;;bar$| ourname
172: [10:38:03] SMARTS Parse Error: Failed parsing SMARTS 'CCC |$foo;;bar$| ourname' for input: 'CCC |$foo;;bar$| ourname'
172: .[10:38:03] SMILES Parse Error: syntax error while parsing: CCC |$foo;;bar$| ourname
172: [10:38:03] SMILES Parse Error: Failed parsing SMILES 'CCC |$foo;;bar$| ourname' for input: 'CCC |$foo;;bar$| ourname'
172: ..[10:38:03] SMILES Parse Error: syntax error while parsing: error
172: [10:38:03] SMILES Parse Error: Failed parsing SMILES 'error' for input: 'error'
172: [10:38:03] SMILES Parse Error: Failed parsing SMILES 'd' for input: 'd'
172: [10:38:03] SMARTS Parse Error: Failed parsing SMARTS 'error' for input: 'error'
172: [10:38:03] SMARTS Parse Error: Failed parsing SMARTS 'd' for input: 'd'
172: ..............[10:38:03] SMILES Parse Error: syntax error while parsing: garbage_0
172: [10:38:03] SMILES Parse Error: Failed parsing SMILES 'garbage_0' for input: 'garbage_0'
172: [10:38:03] SMILES Parse Error: syntax error while parsing: garbage_2
172: [10:38:03] SMILES Parse Error: Failed parsing SMILES 'garbage_2' for input: 'garbage_2'
172: [10:38:03] SMILES Parse Error: syntax error while parsing: garbage_4
172: [10:38:03] SMILES Parse Error: Failed parsing SMILES 'garbage_4' for input: 'garbage_4'
205: [10:38:03] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:38:03] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:38:03] INFO:   Processing 10 molecules
205: 
172: ..........
172: ----------------------------------------------------------------------
172: Ran 241 tests in 88.184s
172: 
172: OK
172: 1
172: supplier: <class 'rdkit.Chem.rdmolfiles.SmilesMolSupplier'>
172: supplier: <class 'rdkit.Chem.rdmolfiles.SDMolSupplier'>
172: supplier: <class 'rdkit.Chem.rdmolfiles.TDTMolSupplier'>
203/213 Test #172: pyGraphMolWrap .........................   Passed   94.06 sec
test 207
        Start 207: pythonTestDirML

207: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/ML/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/ML"
207: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
207: Test timeout computed to be: 1500
206: .........................
206: ----------------------------------------------------------------------
206: Ran 25 tests in 2.246s
206: 
206: OK
204/213 Test #206: pythonTestDirRoot ......................   Passed    4.00 sec
test 208
        Start 208: pythonTestDirDataStructs

208: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/DataStructs/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/DataStructs"
208: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
208: Test timeout computed to be: 1500
205: [10:38:05] INFO: Generating fingerprints and descriptors:
205: 
208: .......
208: ----------------------------------------------------------------------
208: Ran 7 tests in 0.151s
208: 
208: OK
205: [10:38:08] INFO: Finished.
205: 
208: ..................................
208: ----------------------------------------------------------------------
208: Ran 34 tests in 0.051s
208: 
208: OK
207: .......
207: ----------------------------------------------------------------------
207: Ran 7 tests in 4.065s
207: 
207: OK
205: [10:38:13] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:38:13] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:38:13] INFO:   Processing 163 molecules
205: 
208: .....
208: ----------------------------------------------------------------------
208: Ran 5 tests in 1.803s
208: 
208: OK
207: ............
207: ----------------------------------------------------------------------
207: Ran 12 tests in 1.004s
207: 
207: OK
205: [10:38:14] INFO:   done 100
205: 
208: .......
208: ----------------------------------------------------------------------
208: Ran 7 tests in 0.011s
208: 
208: OK
205/213 Test #208: pythonTestDirDataStructs ...............   Passed   11.12 sec
test 209
        Start 209: pythonTestDirDbase

209: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/Dbase/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/Dbase"
209: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
209: Test timeout computed to be: 1500
207: .
207: ----------------------------------------------------------------------
207: Ran 1 test in 0.399s
207: 
207: OK
128: CCCCC[C@@H](O)/C=C/[C@@]1(F)[C@H](C/C=C\CCCC(=O)OC)[C@H](O)C[C@@H]1O
207: ...
207: ----------------------------------------------------------------------
207: Ran 3 tests in 0.011s
207: 
207: OK
209: ..
209: ----------------------------------------------------------------------
209: Ran 2 tests in 2.808s
209: 
209: OK
207: ........
207: ----------------------------------------------------------------------
207: Ran 8 tests in 0.007s
207: 
207: OK
205: [10:38:20] INFO: Generating fingerprints and descriptors:
205: 
207: ....
207: ----------------------------------------------------------------------
207: Ran 4 tests in 1.227s
207: 
207: OK
209: ...........
209: ----------------------------------------------------------------------
209: Ran 11 tests in 3.677s
209: 
209: OK
209: .
209: ----------------------------------------------------------------------
209: Ran 1 test in 0.010s
209: 
209: OK
207: .....
207: ----------------------------------------------------------------------
207: Ran 5 tests in 0.016s
207: 
207: OK
209: ...............
209: ----------------------------------------------------------------------
209: Ran 15 tests in 1.873s
209: 
209: OK
207: .........
207: ----------------------------------------------------------------------
207: Ran 9 tests in 0.036s
207: 
207: OK
209: ......
209: ----------------------------------------------------------------------
209: Ran 6 tests in 0.041s
209: 
209: OK
206/213 Test #209: pythonTestDirDbase .....................   Passed   13.56 sec
test 210
        Start 210: pythonTestDirSimDivFilters

210: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/SimDivFilters/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/SimDivFilters"
210: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
210: Test timeout computed to be: 1500
207: ............
207: ----------------------------------------------------------------------
207: Ran 12 tests in 0.016s
207: 
207: OK
207: .....
207: ----------------------------------------------------------------------
207: Ran 5 tests in 0.256s
207: 
207: OK
207/213 Test #210: pythonTestDirSimDivFilters .............   Passed    3.12 sec
test 211
        Start 211: pythonTestDirVLib

211: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/VLib/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/VLib"
211: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
211: Test timeout computed to be: 1500
211: .............
211: ----------------------------------------------------------------------
211: Ran 13 tests in 0.102s
211: 
211: OK
207: .
207: ----------------------------------------------------------------------
207: Ran 1 test in 0.002s
207: 
207: OK
211: ...........
211: ----------------------------------------------------------------------
211: Ran 11 tests in 0.540s
211: 
211: OK
207: ......
207: ----------------------------------------------------------------------
207: Ran 6 tests in 0.017s
207: 
207: OK
208/213 Test #211: pythonTestDirVLib ......................   Passed    5.68 sec
test 212
        Start 212: pythonTestSping

212: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/Chem/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/sping"
212: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit
212: Test timeout computed to be: 1500
207: ....
207: ----------------------------------------------------------------------
207: Ran 4 tests in 1.595s
207: 
207: OK
207: ......
207: ----------------------------------------------------------------------
207: Ran 6 tests in 0.171s
207: 
207: OK
212: ..
212: ----------------------------------------------------------------------
212: Ran 2 tests in 1.848s
212: 
212: OK
209/213 Test #212: pythonTestSping ........................   Passed    6.29 sec
test 213
        Start 213: pythonTestDirChem

213: Test command: /usr/bin/python3.11 "/<<PKGBUILDDIR>>/rdkit/Chem/test_list.py" "--testDir" "/<<PKGBUILDDIR>>/rdkit/Chem" "--buildType" "None"
213: Working Directory: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem
213: Test timeout computed to be: 1500
128: CNC(=O)Oc1cccc2c1OC[C@@H]1CCN(C)[C@H]21
207: ..
207: ----------------------------------------------------------------------
207: Ran 2 tests in 0.928s
207: 
207: OK
207: ..........
207: ----------------------------------------------------------------------
207: Ran 10 tests in 0.094s
207: 
207: OK
213: .......
213: ----------------------------------------------------------------------
213: Ran 7 tests in 1.059s
213: 
213: OK
207: .....
207: ----------------------------------------------------------------------
207: Ran 5 tests in 0.541s
207: 
207: OK
205: [10:38:51] INFO: Finished.
205: 
128: CNC(=O)Oc1ccc2c(c1)[C@@H]1[C@@H](CCN1C)CO2
213: ......
213: ----------------------------------------------------------------------
213: Ran 6 tests in 0.391s
213: 
213: OK
207: ..
207: ----------------------------------------------------------------------
207: Ran 2 tests in 0.037s
207: 
207: OK
207: .....
207: ----------------------------------------------------------------------
207: Ran 5 tests in 0.100s
207: 
207: OK
213: ....[10:38:54] 
213: 
213: ****
213: Pre-condition Violation
213: valence not defined for atoms not associated with molecules
213: Violation occurred on line 423 in file ./Code/GraphMol/Atom.cpp
213: Failed Expression: dp_mol
213: ****
213: 
213: .
213: ----------------------------------------------------------------------
213: Ran 5 tests in 0.101s
213: 
213: OK
207: ...
207: ----------------------------------------------------------------------
207: Ran 3 tests in 0.076s
207: 
207: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.089s
213: 
213: OK
213: ..
213: ----------------------------------------------------------------------
213: Ran 2 tests in 0.087s
213: 
213: OK
128: CN1CC[C@H]2COc3c(O)cccc3[C@H]21
207: ...
207: ----------------------------------------------------------------------
207: Ran 3 tests in 2.533s
207: 
207: OK
213: ......................
213: ----------------------------------------------------------------------
213: Ran 22 tests in 0.379s
213: 
213: OK
128: CC(=O)C[C@@]12CCC[C@H]1[C@@H]1CCC3=CC(=O)CC[C@@H]3[C@H]1CC2
213: .....s.................ss
213: ----------------------------------------------------------------------
213: Ran 25 tests in 1.530s
213: 
213: OK (skipped=3)
207: ......
207: ----------------------------------------------------------------------
207: Ran 6 tests in 3.162s
207: 
207: OK
213: ..s
213: ----------------------------------------------------------------------
213: Ran 3 tests in 1.925s
213: 
213: OK (skipped=1)
207: .......
207: ----------------------------------------------------------------------
207: Ran 7 tests in 1.158s
207: 
207: OK
213: ...................................
213: ----------------------------------------------------------------------
213: Ran 35 tests in 1.318s
213: 
213: OK
207: ....
207: ----------------------------------------------------------------------
207: Ran 4 tests in 0.088s
207: 
207: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.294s
213: 
213: OK
213: .
213: ----------------------------------------------------------------------
213: Ran 1 test in 0.188s
213: 
213: OK
128: O=C(O)[C@@H]1C[C@H]2C[C@@H](CCc3nn[nH]n3)CC[C@H]2CN1
213: .......
213: ----------------------------------------------------------------------
213: Ran 7 tests in 0.628s
213: 
213: OK
213: ...
213: ----------------------------------------------------------------------
213: Ran 3 tests in 0.540s
213: 
213: OK
128: COc1ccc2c(c1)OC[C@@H](N1CCC(O)(c3ccc(F)cc3)CC1)[C@H]2O
213: .ss.ss.......
213: ----------------------------------------------------------------------
213: Ran 13 tests in 12.408s
213: 
213: OK (skipped=4)
213: [10:39:41] Molecule does not have explicit Hs. Consider calling AddHs()
213: .[10:39:41] Molecule does not have explicit Hs. Consider calling AddHs()
128: Oc1ccc2c(c1)OC[C@@H](N1CCC(Cc3ccccc3)CC1)[C@H]2O
207: .....
207: ----------------------------------------------------------------------
207: Ran 5 tests in 30.109s
207: 
207: OK
207: ....
207: ----------------------------------------------------------------------
207: Ran 4 tests in 0.015s
207: 
207: OK
207: ....
207: ----------------------------------------------------------------------
207: Ran 4 tests in 0.004s
207: 
207: OK
205: .........[10:39:51] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:39:51] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:39:51] INFO:   Processing 10 molecules
205: 
207: ....
207: ----------------------------------------------------------------------
207: Ran 4 tests in 0.028s
207: 
207: OK
210/213 Test #207: pythonTestDirML ........................   Passed  107.65 sec
205: [10:39:52] INFO: Generating fingerprints and descriptors:
205: 
205: [10:39:52] INFO: Finished.
205: 
128: Oc1ccc2c(c1)OC[C@H](N1CCC(O)(c3ccccc3)CC1)[C@@H]2O
205: [10:39:56] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:39:56] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:39:56] INFO:   Processing 10 molecules
205: 
205: [10:39:57] INFO: Generating fingerprints and descriptors:
205: 
205: [10:39:57] INFO: Finished.
205: 
205: [10:40:01] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:40:01] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:40:01] INFO:   Processing 10 molecules
205: 
205: [10:40:02] INFO: Generating fingerprints and descriptors:
205: 
205: [10:40:02] INFO: Finished.
205: 
128: CC(=O)c1ccc2c(c1)[C@@]13CCCC[C@H]1[C@@H](C2)N(CC1CC1)CC3
205: [10:40:07] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:40:07] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:40:08] INFO: Generating fingerprints and descriptors:
205: 
205: [10:40:08] INFO: Finished.
205: 
205: [10:40:12] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:40:12] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:40:13] INFO: Generating fingerprints and descriptors:
205: 
205: [10:40:14] INFO: Finished.
205: 
205: .[10:40:19] INFO: Guessing that mol format is 'sdf'. Use --molFormat argument if this is wrong.
205: 
205: [10:40:19] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:40:19] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:40:19] INFO:   Processing 163 molecules
205: 
205: [10:40:20] INFO:   done 100
205: 
128: CC(=O)O[C@@H]1CC[C@@H]2CN3CCc4cc5c(cc4[C@@H]3C[C@@H]2C1)OCO5
205: [10:40:22] INFO: Generating fingerprints and descriptors:
205: 
205: [10:40:25] INFO: Finished.
205: 
128: COc1cc2c(cc1OC)[C@@H]1C[C@@H]3C[C@H](O)CC[C@@H]3CN1CC2
205: .[10:40:33] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:40:33] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:40:33] INFO:   Processing 10 molecules
205: 
205: [10:40:36] INFO: Generating fingerprints and descriptors:
205: 
205: [10:40:38] INFO: Finished.
205: 
205: [10:40:43] INFO: Reading molecules and constructing molecular database.
205: 
205: [10:40:43] INFO: Generating molecular database in file testData/bzr/Compounds.sqlt
205: 
205: [10:40:43] INFO:   Processing 10 molecules
205: 
205: [10:40:46] INFO: Generating fingerprints and descriptors:
205: 
128: N#C[C@@H]1C[C@@H]2CN3CCc4cc5c(cc4[C@@H]3C[C@@H]2C[C@@H]1O)OCO5
205: [10:40:49] INFO: Finished.
205: 
205: .
205: ----------------------------------------------------------------------
205: Ran 12 tests in 173.349s
205: 
205: OK
211/213 Test #205: pythonTestDbCLI ........................   Passed  174.88 sec
128: COC(=O)[C@@H]1C[C@](C)(C(=O)O)NC(=O)N1
128: CC(=O)OC1=C(Sc2ccccc2)C[C@H]2Cc3cc4cccc(O)c4c(O)c3C(=O)[C@H]2C1
128: Nc1ncnc2c1ncn2[C@@H]1C[C@H](CO)[C@@H](O)C1
128: C[C@H](C(N)=O)N1CC[C@@]23CCCC[C@@H]2[C@@H]1Cc1ccc(OCc2cccc(F)c2)cc13
128: CN1C(=O)CC[C@@]2(C)C1=CCc1cc(Cl)ccc12
128: Cc1nc(COc2ccc3c(c2)[C@@H](O)[C@@H](Cc2cccnc2)CO3)ccc1[N+](=O)[O-]
212/213 Test #128: testDistGeomHelpers ....................***Timeout 1500.04 sec
go
-------------------------------------

building molecules
generating reference data
validating reference data
processing
 launch :0
 launch :1
 launch :2
 launch :3
[10:35:46]   done
CNC[C@H]1CC[C@H](C[NH3+])CC1
C1=NC[C@]2(CN3CC[C@@H]2C3)O1
O=C(O)[C@@H]1[C@H](C(=O)O)[C@H]2CC[C@@H]1O2
O=C(CCc1ccccc1)OC[C@H]1C[C@@H]2O[C@H]1[C@H]1C(=O)OC(=O)[C@H]12
Cn1cc(C2=NC[C@]3(CN4CC[C@@H]3C4)O2)c2ccccc21
Nc1ncnc2c1ncn2[C@@H]1C=C(CO)[C@@H](O)[C@H]1O
CO[C@H]1[C@@H](N)[C@@H](O)[C@@H](O)[C@H]1O
CO[C@@H]1[C@@H](N)[C@@H](O)[C@@H](O)[C@H]1O
CCS[C@@H]1[C@@H](N)[C@@H](O)[C@@H](O)[C@H]1O
CCCCC[C@H](O)/C=C/[C@@]1(F)[C@H](O)C[C@H](O)[C@@H]1C/C=C\CCCC(=O)OC
CCCCC[C@@H](O)/C=C/[C@@]1(F)[C@H](C/C=C\CCCC(=O)OC)[C@H](O)C[C@@H]1O
CNC(=O)Oc1cccc2c1OC[C@@H]1CCN(C)[C@H]21
CNC(=O)Oc1ccc2c(c1)[C@@H]1[C@@H](CCN1C)CO2
CN1CC[C@H]2COc3c(O)cccc3[C@H]21
CC(=O)C[C@@]12CCC[C@H]1[C@@H]1CCC3=CC(=O)CC[C@@H]3[C@H]1CC2
O=C(O)[C@@H]1C[C@H]2C[C@@H](CCc3nn[nH]n3)CC[C@H]2CN1
COc1ccc2c(c1)OC[C@@H](N1CCC(O)(c3ccc(F)cc3)CC1)[C@H]2O
Oc1ccc2c(c1)OC[C@@H](N1CCC(Cc3ccccc3)CC1)[C@H]2O
Oc1ccc2c(c1)OC[C@H](N1CCC(O)(c3ccccc3)CC1)[C@@H]2O
CC(=O)c1ccc2c(c1)[C@@]13CCCC[C@H]1[C@@H](C2)N(CC1CC1)CC3
CC(=O)O[C@@H]1CC[C@@H]2CN3CCc4cc5c(cc4[C@@H]3C[C@@H]2C1)OCO5
COc1cc2c(cc1OC)[C@@H]1C[C@@H]3C[C@H](O)CC[C@@H]3CN1CC2
N#C[C@@H]1C[C@@H]2CN3CCc4cc5c(cc4[C@@H]3C[C@@H]2C[C@@H]1O)OCO5
COC(=O)[C@@H]1C[C@](C)(C(=O)O)NC(=O)N1
CC(=O)OC1=C(Sc2ccccc2)C[C@H]2Cc3cc4cccc(O)c4c(O)c3C(=O)[C@H]2C1
Nc1ncnc2c1ncn2[C@@H]1C[C@H](CO)[C@@H](O)C1
C[C@H](C(N)=O)N1CC[C@@]23CCCC[C@@H]2[C@@H]1Cc1ccc(OCc2cccc(F)c2)cc13
CN1C(=O)CC[C@@]2(C)C1=CCc1cc(Cl)ccc12
Cc1nc(COc2ccc3c(c2)[C@@H](O)[C@@H](Cc2cccnc2)CO3)ccc1[N+](=O)[O-]

213: .........F..........[10:44:30] WARNING: More than one matching pattern found - picking one
213: 
213: [10:44:31] WARNING: More than one matching pattern found - picking one
213: 
213: .[10:44:31] WARNING: More than one matching pattern found - picking one
213: 
213: ...
213: ======================================================================
213: FAIL: testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable (__main__.TestCase.testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable)
213: ----------------------------------------------------------------------
213: Traceback (most recent call last):
213:   File "/<<PKGBUILDDIR>>/rdkit/Chem/UnitTestMol3D.py", line 248, in testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable
213:     self.assertEqual(smiles, expected)
213: AssertionError: Items in the first set but not the second:
213: 'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@@H](N)I'
213: 'C/C(F)=C/[C@@H](Cl)/C=C(/Br)[C@@H](N)I'
213: Items in the second set but not the first:
213: 'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@H](N)I'
213: 'C/C(F)=C\\[C@H](Cl)/C=C(\\Br)[C@H](N)I'
213: 
213: ----------------------------------------------------------------------
213: Ran 25 tests in 327.954s
213: 
213: FAILED (failures=1)
213: {'C/C(F)=C\\[C@@H](C)Cl', 'C/C(F)=C/[C@H](C)Cl', 'C/C(F)=C/[C@@H](C)Cl', 'C/C(F)=C\\[C@H](C)Cl'}
213: {'C/C(F)=C\\[C@@H](C)Cl', 'C/C(F)=C/[C@H](C)Cl', 'C/C(F)=C/[C@@H](C)Cl', 'C/C(F)=C\\[C@H](C)Cl'}
213: {'F[C@H](Cl)[C@H](F)Cl', 'F[C@@H](Cl)[C@@H](F)Cl', 'F[C@H](Cl)[C@@H](F)Cl'}
213: !!!! ['C[C@H]([C@H](C)Br)[C@@H](C)F', 'C[C@@H]([C@@H](C)F)[C@@H](C)Br', 'C[C@@H]([C@H](C)Br)[C@@H](C)F', 'C[C@H]([C@@H](C)F)[C@@H](C)Br', 'C[C@@H]([C@H](C)F)[C@H](C)Br', 'C[C@@H]([C@H](C)F)[C@@H](C)Br', 'C[C@H]([C@H](C)F)[C@H](C)Br', 'C[C@H]([C@H](C)F)[C@@H](C)Br']
213: ........
213: ----------------------------------------------------------------------
213: Ran 8 tests in 0.919s
213: 
213: OK
213: .....[10:45:38] WARNING: not removing hydrogen atom without neighbors
213: [10:45:38] WARNING: not removing hydrogen atom without neighbors
213: [10:45:38] WARNING: not removing hydrogen atom without neighbors
213: ....[10:45:39] WARNING: not removing hydrogen atom without neighbors
213: ......
213: ----------------------------------------------------------------------
213: Ran 15 tests in 24.803s
213: 
213: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 10.052s
213: 
213: OK
213: ......
213: ----------------------------------------------------------------------
213: Ran 6 tests in 2.402s
213: 
213: OK
213: ...............s..s.........
213: ----------------------------------------------------------------------
213: Ran 28 tests in 19.098s
213: 
213: OK (skipped=2)
213: ..............[10:47:53] WARNING: More than one matching pattern found - picking one
213: 
213: [10:47:53] WARNING: More than one matching pattern found - picking one
213: 
213: ..[10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
213: [10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
213: [10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
213: [10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
213: .........
213: ----------------------------------------------------------------------
213: Ran 25 tests in 90.104s
213: 
213: OK
213: ..
213: ----------------------------------------------------------------------
213: Ran 2 tests in 0.338s
213: 
213: OK
213: ..s...
213: ----------------------------------------------------------------------
213: Ran 6 tests in 6.980s
213: 
213: OK (skipped=1)
213: ..............
213: ----------------------------------------------------------------------
213: Ran 14 tests in 35.208s
213: 
213: OK
213: ..[10:50:15] WARNING: not removing hydrogen atom without neighbors
213: .[10:50:16] WARNING: not removing hydrogen atom without neighbors
213: .[10:50:16] WARNING: no name column found on line 1
213: [10:50:16] WARNING: no name column found on line 2
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213: [10:50:16] WARNING: no name column found on line 4
213: [10:50:16] WARNING: no name column found on line 5
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213: [10:50:16] WARNING: no name column found on line 7
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213: [10:50:16] WARNING: no name column found on line 11
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213: [10:50:16] WARNING: no name column found on line 51
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213: [10:50:16] WARNING: no name column found on line 57
213: [10:50:16] WARNING: no name column found on line 58
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213: [10:50:16] WARNING: no name column found on line 111
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213: [10:50:16] WARNING: no name column found on line 113
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213: [10:50:16] WARNING: no name column found on line 125
213: [10:50:16] WARNING: no name column found on line 126
213: [10:50:16] WARNING: no name column found on line 127
213: [10:50:16] WARNING: no name column found on line 128
213: [10:50:16] WARNING: no name column found on line 129
213: [10:50:16] WARNING: no name column found on line 130
213: [10:50:16] WARNING: no name column found on line 131
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213: [10:50:16] WARNING: no name column found on line 133
213: [10:50:16] WARNING: no name column found on line 134
213: [10:50:16] WARNING: no name column found on line 135
213: [10:50:16] WARNING: no name column found on line 136
213: [10:50:16] WARNING: no name column found on line 137
213: [10:50:16] WARNING: no name column found on line 138
213: [10:50:16] WARNING: no name column found on line 139
213: [10:50:16] WARNING: no name column found on line 140
213: [10:50:16] WARNING: no name column found on line 141
213: [10:50:16] WARNING: no name column found on line 142
213: [10:50:16] WARNING: no name column found on line 143
213: [10:50:16] WARNING: no name column found on line 144
213: [10:50:16] WARNING: no name column found on line 145
213: [10:50:16] WARNING: no name column found on line 146
213: [10:50:16] WARNING: no name column found on line 147
213: [10:50:16] WARNING: no name column found on line 148
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213: [10:50:16] WARNING: no name column found on line 151
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213: [10:50:16] WARNING: no name column found on line 153
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213: [10:50:16] WARNING: no name column found on line 159
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213: [10:50:16] WARNING: no name column found on line 161
213: [10:50:16] WARNING: no name column found on line 162
213: [10:50:16] WARNING: no name column found on line 163
213: [10:50:16] WARNING: no name column found on line 164
213: [10:50:16] WARNING: no name column found on line 165
213: [10:50:16] WARNING: no name column found on line 166
213: [10:50:16] WARNING: no name column found on line 167
213: [10:50:16] WARNING: no name column found on line 168
213: [10:50:16] WARNING: no name column found on line 169
213: [10:50:16] WARNING: no name column found on line 170
213: [10:50:16] WARNING: no name column found on line 171
213: [10:50:16] WARNING: no name column found on line 172
213: [10:50:16] WARNING: no name column found on line 173
213: [10:50:16] WARNING: no name column found on line 174
213: [10:50:16] WARNING: no name column found on line 175
213: [10:50:16] WARNING: no name column found on line 176
213: [10:50:16] WARNING: no name column found on line 177
213: [10:50:16] WARNING: no name column found on line 178
213: [10:50:16] WARNING: no name column found on line 179
213: [10:50:16] WARNING: no name column found on line 180
213: [10:50:16] WARNING: no name column found on line 181
213: [10:50:16] WARNING: no name column found on line 182
213: [10:50:16] WARNING: no name column found on line 183
213: [10:50:16] WARNING: no name column found on line 184
213: [10:50:16] WARNING: no name column found on line 185
213: [10:50:16] WARNING: no name column found on line 186
213: [10:50:16] WARNING: no name column found on line 187
213: [10:50:16] WARNING: no name column found on line 188
213: [10:50:16] WARNING: no name column found on line 189
213: [10:50:16] WARNING: no name column found on line 190
213: [10:50:16] WARNING: no name column found on line 191
213: [10:50:16] WARNING: no name column found on line 192
213: [10:50:16] WARNING: no name column found on line 193
213: [10:50:16] WARNING: no name column found on line 194
213: [10:50:16] WARNING: no name column found on line 195
213: [10:50:16] WARNING: no name column found on line 196
213: [10:50:16] WARNING: no name column found on line 197
213: [10:50:16] WARNING: no name column found on line 198
213: [10:50:16] WARNING: no name column found on line 199
213: [10:50:16] WARNING: no name column found on line 200
213: [10:50:16] WARNING: no name column found on line 201
213: [10:50:16] WARNING: no name column found on line 202
213: [10:50:16] WARNING: no name column found on line 203
213: [10:50:16] WARNING: no name column found on line 204
213: [10:50:16] WARNING: no name column found on line 205
213: [10:50:16] WARNING: no name column found on line 206
213: [10:50:16] WARNING: no name column found on line 207
213: [10:50:16] WARNING: no name column found on line 208
213: [10:50:16] WARNING: no name column found on line 209
213: [10:50:16] WARNING: no name column found on line 210
213: [10:50:16] WARNING: no name column found on line 211
213: [10:50:16] WARNING: no name column found on line 212
213: [10:50:16] WARNING: no name column found on line 213
213: [10:50:16] WARNING: no name column found on line 214
213: [10:50:16] WARNING: no name column found on line 215
213: [10:50:16] WARNING: no name column found on line 216
213: ......
213: ----------------------------------------------------------------------
213: Ran 10 tests in 1.072s
213: 
213: OK
213: ..................
213: ----------------------------------------------------------------------
213: Ran 18 tests in 5.837s
213: 
213: OK
213: ...
213: ----------------------------------------------------------------------
213: Ran 3 tests in 0.681s
213: 
213: OK
213: ........
213: ----------------------------------------------------------------------
213: Ran 8 tests in 0.240s
213: 
213: OK
213: ..
213: ----------------------------------------------------------------------
213: Ran 2 tests in 0.170s
213: 
213: OK
213: ..
213: ----------------------------------------------------------------------
213: Ran 2 tests in 0.128s
213: 
213: OK
213: .
213: ----------------------------------------------------------------------
213: Ran 1 test in 0.664s
213: 
213: OK
213: ........
213: ----------------------------------------------------------------------
213: Ran 8 tests in 0.013s
213: 
213: OK
213: ...
213: ----------------------------------------------------------------------
213: Ran 3 tests in 0.025s
213: 
213: OK
213: ...
213: ----------------------------------------------------------------------
213: Ran 3 tests in 0.011s
213: 
213: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.032s
213: 
213: OK
213: .......
213: ----------------------------------------------------------------------
213: Ran 7 tests in 0.123s
213: 
213: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.141s
213: 
213: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 20.473s
213: 
213: OK
213: ..........
213: ----------------------------------------------------------------------
213: Ran 10 tests in 0.378s
213: 
213: OK
213: .
213: ----------------------------------------------------------------------
213: Ran 1 test in 0.001s
213: 
213: OK
213: ..........
213: ----------------------------------------------------------------------
213: Ran 10 tests in 0.027s
213: 
213: OK
213: .....
213: ----------------------------------------------------------------------
213: Ran 5 tests in 0.568s
213: 
213: OK
213: ................[10:52:18] Molecule does not have explicit Hs. Consider calling AddHs()
213: [10:52:18] Molecule does not have explicit Hs. Consider calling AddHs()
213: .....
213: ----------------------------------------------------------------------
213: Ran 21 tests in 53.590s
213: 
213: OK
213: mol_197
213: 219.10,35.89,110.98,11.56,110.32,11.04,95.23,10.25,0.00
213: mol_223
213: 243.69,7.30,134.82,1.04,134.75,1.04,85.57,0.33,0.00
213: mol_269
213: 216.26,5.67,105.00,0.87,103.81,0.89,89.27,0.92,6.00
213: .
213: ----------------------------------------------------------------------
213: Ran 1 test in 0.001s
213: 
213: OK
213: ...[10:52:22] 
213: 
213: ****
213: Pre-condition Violation
213: molecule has no conformers
213: Violation occurred on line 37 in file ./Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
213: Failed Expression: dp_mol->getNumConformers()
213: ****
213: 
213: .
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.173s
213: 
213: OK
213: ..
213: ----------------------------------------------------------------------
213: Ran 2 tests in 97.496s
213: 
213: OK
213: ..
213: ----------------------------------------------------------------------
213: Ran 2 tests in 0.719s
213: 
213: OK
213: ...
213: ----------------------------------------------------------------------
213: Ran 3 tests in 0.101s
213: 
213: OK
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.161s
213: 
213: OK
213: .....[10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: [10:54:12] WARNING: not removing hydrogen atom without neighbors
213: .....
213: ----------------------------------------------------------------------
213: Ran 10 tests in 2.598s
213: 
213: OK
213: ssssss[10:54:18] No suitable metadata found.
213: .[10:54:18] No suitable metadata found.
213: .......s/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/Draw/__init__.py:235: DeprecationWarning: legacy DrawingOptions not translated for new drawing code, please update manually
213:   warnings.warn(
213: .....
213: ----------------------------------------------------------------------
213: Ran 20 tests in 3.274s
213: 
213: OK (skipped=7)
213: sss.
213: ----------------------------------------------------------------------
213: Ran 4 tests in 6.256s
213: 
213: OK (skipped=3)
213: sss
213: ----------------------------------------------------------------------
213: Ran 3 tests in 0.001s
213: 
213: OK (skipped=3)
213: ..........
213: ----------------------------------------------------------------------
213: Ran 10 tests in 5.420s
213: 
213: OK
213: ...[10:54:41] SMARTS Parse Error: syntax error while parsing: boromicacid
213: [10:54:41] SMARTS Parse Error: Failed parsing SMARTS 'boromicacid' for input: 'boromicacid'
213: [10:54:41] SMARTS Parse Error: syntax error while parsing: carboxylicacid,acidchlroide
213: [10:54:41] SMARTS Parse Error: Failed parsing SMARTS 'carboxylicacid,acidchlroide' for input: 'carboxylicacid,acidchlroide'
213: [10:54:41] SMARTS Parse Error: syntax error while parsing: carboxyliccaid,acidchloride
213: [10:54:41] SMARTS Parse Error: Failed parsing SMARTS 'carboxyliccaid,acidchloride' for input: 'carboxyliccaid,acidchloride'
213: [10:54:41] reaction has no reactants
213: [10:54:41] reaction has no products
213: [10:54:41] initialization failed
213: [10:54:41] reaction has no reactants
213: [10:54:41] reaction has no products
213: .
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.211s
213: 
213: OK
213: ['C[C@@H](F)CN', 'C[C@@H](F)CN |a:1|', 'C[C@H](F)CN |o1:1|', 'C[C@H](F)CN |&1:1|']
213: ....
213: ----------------------------------------------------------------------
213: Ran 4 tests in 0.094s
213: 
213: OK
213: ........................
213: ----------------------------------------------------------------------
213: Ran 24 tests in 0.719s
213: 
213: OK
213: !!! TEST FAILURE:  python UnitTestMol3D.py {}
213/213 Test #213: pythonTestDirChem ......................***Failed  964.17 sec
.......
----------------------------------------------------------------------
Ran 7 tests in 1.059s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.391s

OK
....[10:38:54] 

****
Pre-condition Violation
valence not defined for atoms not associated with molecules
Violation occurred on line 423 in file ./Code/GraphMol/Atom.cpp
Failed Expression: dp_mol
****

.
----------------------------------------------------------------------
Ran 5 tests in 0.101s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.089s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.087s

OK
......................
----------------------------------------------------------------------
Ran 22 tests in 0.379s

OK
.....s.................ss
----------------------------------------------------------------------
Ran 25 tests in 1.530s

OK (skipped=3)
..s
----------------------------------------------------------------------
Ran 3 tests in 1.925s

OK (skipped=1)
...................................
----------------------------------------------------------------------
Ran 35 tests in 1.318s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.294s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.188s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.628s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.540s

OK
.ss.ss.......
----------------------------------------------------------------------
Ran 13 tests in 12.408s

OK (skipped=4)
[10:39:41] Molecule does not have explicit Hs. Consider calling AddHs()
.[10:39:41] Molecule does not have explicit Hs. Consider calling AddHs()
.........F..........[10:44:30] WARNING: More than one matching pattern found - picking one

[10:44:31] WARNING: More than one matching pattern found - picking one

.[10:44:31] WARNING: More than one matching pattern found - picking one

...
======================================================================
FAIL: testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable (__main__.TestCase.testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/rdkit/Chem/UnitTestMol3D.py", line 248, in testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable
    self.assertEqual(smiles, expected)
AssertionError: Items in the first set but not the second:
'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@@H](N)I'
'C/C(F)=C/[C@@H](Cl)/C=C(/Br)[C@@H](N)I'
Items in the second set but not the first:
'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@H](N)I'
'C/C(F)=C\\[C@H](Cl)/C=C(\\Br)[C@H](N)I'

----------------------------------------------------------------------
Ran 25 tests in 327.954s

FAILED (failures=1)
{'C/C(F)=C\\[C@@H](C)Cl', 'C/C(F)=C/[C@H](C)Cl', 'C/C(F)=C/[C@@H](C)Cl', 'C/C(F)=C\\[C@H](C)Cl'}
{'C/C(F)=C\\[C@@H](C)Cl', 'C/C(F)=C/[C@H](C)Cl', 'C/C(F)=C/[C@@H](C)Cl', 'C/C(F)=C\\[C@H](C)Cl'}
{'F[C@H](Cl)[C@H](F)Cl', 'F[C@@H](Cl)[C@@H](F)Cl', 'F[C@H](Cl)[C@@H](F)Cl'}
!!!! ['C[C@H]([C@H](C)Br)[C@@H](C)F', 'C[C@@H]([C@@H](C)F)[C@@H](C)Br', 'C[C@@H]([C@H](C)Br)[C@@H](C)F', 'C[C@H]([C@@H](C)F)[C@@H](C)Br', 'C[C@@H]([C@H](C)F)[C@H](C)Br', 'C[C@@H]([C@H](C)F)[C@@H](C)Br', 'C[C@H]([C@H](C)F)[C@H](C)Br', 'C[C@H]([C@H](C)F)[C@@H](C)Br']
........
----------------------------------------------------------------------
Ran 8 tests in 0.919s

OK
.....[10:45:38] WARNING: not removing hydrogen atom without neighbors
[10:45:38] WARNING: not removing hydrogen atom without neighbors
[10:45:38] WARNING: not removing hydrogen atom without neighbors
....[10:45:39] WARNING: not removing hydrogen atom without neighbors
......
----------------------------------------------------------------------
Ran 15 tests in 24.803s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 10.052s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 2.402s

OK
...............s..s.........
----------------------------------------------------------------------
Ran 28 tests in 19.098s

OK (skipped=2)
..............[10:47:53] WARNING: More than one matching pattern found - picking one

[10:47:53] WARNING: More than one matching pattern found - picking one

..[10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
[10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
[10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
[10:47:54] Molecule does not have explicit Hs. Consider calling AddHs()
.........
----------------------------------------------------------------------
Ran 25 tests in 90.104s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.338s

OK
..s...
----------------------------------------------------------------------
Ran 6 tests in 6.980s

OK (skipped=1)
..............
----------------------------------------------------------------------
Ran 14 tests in 35.208s

OK
..[10:50:15] WARNING: not removing hydrogen atom without neighbors
.[10:50:16] WARNING: not removing hydrogen atom without neighbors
.[10:50:16] WARNING: no name column found on line 1
[10:50:16] WARNING: no name column found on line 2
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[10:50:16] WARNING: no name column found on line 181
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[10:50:16] WARNING: no name column found on line 186
[10:50:16] WARNING: no name column found on line 187
[10:50:16] WARNING: no name column found on line 188
[10:50:16] WARNING: no name column found on line 189
[10:50:16] WARNING: no name column found on line 190
[10:50:16] WARNING: no name column found on line 191
[10:50:16] WARNING: no name column found on line 192
[10:50:16] WARNING: no name column found on line 193
[10:50:16] WARNING: no name column found on line 194
[10:50:16] WARNING: no name column found on line 195
[10:50:16] WARNING: no name column found on line 196
[10:50:16] WARNING: no name column found on line 197
[10:50:16] WARNING: no name column found on line 198
[10:50:16] WARNING: no name column found on line 199
[10:50:16] WARNING: no name column found on line 200
[10:50:16] WARNING: no name column found on line 201
[10:50:16] WARNING: no name column found on line 202
[10:50:16] WARNING: no name column found on line 203
[10:50:16] WARNING: no name column found on line 204
[10:50:16] WARNING: no name column found on line 205
[10:50:16] WARNING: no name column found on line 206
[10:50:16] WARNING: no name column found on line 207
[10:50:16] WARNING: no name column found on line 208
[10:50:16] WARNING: no name column found on line 209
[10:50:16] WARNING: no name column found on line 210
[10:50:16] WARNING: no name column found on line 211
[10:50:16] WARNING: no name column found on line 212
[10:50:16] WARNING: no name column found on line 213
[10:50:16] WARNING: no name column found on line 214
[10:50:16] WARNING: no name column found on line 215
[10:50:16] WARNING: no name column found on line 216
......
----------------------------------------------------------------------
Ran 10 tests in 1.072s

OK
..................
----------------------------------------------------------------------
Ran 18 tests in 5.837s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.681s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.240s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.170s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.128s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.664s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.013s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.025s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.011s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.032s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.123s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.141s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 20.473s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.378s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.027s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.568s

OK
................[10:52:18] Molecule does not have explicit Hs. Consider calling AddHs()
[10:52:18] Molecule does not have explicit Hs. Consider calling AddHs()
.....
----------------------------------------------------------------------
Ran 21 tests in 53.590s

OK
mol_197
219.10,35.89,110.98,11.56,110.32,11.04,95.23,10.25,0.00
mol_223
243.69,7.30,134.82,1.04,134.75,1.04,85.57,0.33,0.00
mol_269
216.26,5.67,105.00,0.87,103.81,0.89,89.27,0.92,6.00
.
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK
...[10:52:22] 

****
Pre-condition Violation
molecule has no conformers
Violation occurred on line 37 in file ./Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
Failed Expression: dp_mol->getNumConformers()
****

.
----------------------------------------------------------------------
Ran 4 tests in 0.173s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 97.496s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.719s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.101s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.161s

OK
.....[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
[10:54:12] WARNING: not removing hydrogen atom without neighbors
.....
----------------------------------------------------------------------
Ran 10 tests in 2.598s

OK
ssssss[10:54:18] No suitable metadata found.
.[10:54:18] No suitable metadata found.
.......s/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/Draw/__init__.py:235: DeprecationWarning: legacy DrawingOptions not translated for new drawing code, please update manually
  warnings.warn(
.....
----------------------------------------------------------------------
Ran 20 tests in 3.274s

OK (skipped=7)
sss.
----------------------------------------------------------------------
Ran 4 tests in 6.256s

OK (skipped=3)
sss
----------------------------------------------------------------------
Ran 3 tests in 0.001s

OK (skipped=3)
..........
----------------------------------------------------------------------
Ran 10 tests in 5.420s

OK
...[10:54:41] SMARTS Parse Error: syntax error while parsing: boromicacid
[10:54:41] SMARTS Parse Error: Failed parsing SMARTS 'boromicacid' for input: 'boromicacid'
[10:54:41] SMARTS Parse Error: syntax error while parsing: carboxylicacid,acidchlroide
[10:54:41] SMARTS Parse Error: Failed parsing SMARTS 'carboxylicacid,acidchlroide' for input: 'carboxylicacid,acidchlroide'
[10:54:41] SMARTS Parse Error: syntax error while parsing: carboxyliccaid,acidchloride
[10:54:41] SMARTS Parse Error: Failed parsing SMARTS 'carboxyliccaid,acidchloride' for input: 'carboxyliccaid,acidchloride'
[10:54:41] reaction has no reactants
[10:54:41] reaction has no products
[10:54:41] initialization failed
[10:54:41] reaction has no reactants
[10:54:41] reaction has no products
.
----------------------------------------------------------------------
Ran 4 tests in 0.211s

OK
['C[C@@H](F)CN', 'C[C@@H](F)CN |a:1|', 'C[C@H](F)CN |o1:1|', 'C[C@H](F)CN |&1:1|']
....
----------------------------------------------------------------------
Ran 4 tests in 0.094s

OK
........................
----------------------------------------------------------------------
Ran 24 tests in 0.719s

OK
!!! TEST FAILURE:  python UnitTestMol3D.py {}


99% tests passed, 3 tests failed out of 213

Total Test time (real) = 2567.31 sec

The following tests FAILED:
	115 - fpTestCatch (Failed)
	128 - testDistGeomHelpers (Timeout)
	213 - pythonTestDirChem (Failed)
Errors while running CTest
make[2]: *** [Makefile:94: test] Error 8
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test: error: cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=--verbose ARGS\+=-j4 returned exit code 2
make[1]: [debian/rules:133: override_dh_auto_test] Error 25 (ignored)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -a -O--buildsystem=cmake
   dh_prep -a -O--buildsystem=cmake
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
	cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Avalon
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Avalon/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AllChem.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/AtomPairs/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/BRICS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemUtils/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Crippen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/DSViewer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/InteractiveRenderer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/aggCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/cairoCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/canvasbase.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/mplCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/qtCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/spingCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/similarityMap1_out.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/similarityMap1_out2.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState/EState.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EState/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FeatMaps/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Features
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Features/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Features/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fingerprints/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fraggle/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Fragments.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Graphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Lipinski.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MCS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolDb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolKey
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/charge.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/errors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/fragment.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/metal.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/normalize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/resonance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/tautomer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/test_standardizer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/validations.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolSurf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/PandasPatcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/PandasTools.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm2D/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm3D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Pharm3D/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/PropertyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/PyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/QED.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Randomize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Recap.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/RegistrationHash.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/SATIS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/SaltRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Scaffolds
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Scaffolds/ScaffoldNetwork.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Scaffolds/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/ShowMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/SimpleEnum
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/SimpleEnum/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/testCombined.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Subshape/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Suppliers
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Suppliers/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/nbtests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/nbtests/ChEMBL_quinolones.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/nbtests/github4823.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/nbtests/rdkit-structure-renderer.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/inchi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataManip
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataManip/Metric
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataManip/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/DbConnection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/DbInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/DbModule.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/DbReport.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/DbUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Dbase/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DistanceGeometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ForceField/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Geometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Geometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/AnalyzeComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/BuildComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/Butina.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/ClusterUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/ClusterVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/Clusters.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/Murtagh.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/Resemblance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/Standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/murtagh_test.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Composite
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Composite/AdjustComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Composite/BayesComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Composite/Composite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Composite/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Composite/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/CompositeRun.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/MLData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/Quantize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/SplitData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/Stats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/Transforms.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/BuildQuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/BuildSigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/DecTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/Forest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/ID3.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/PruneTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/QuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/SigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/Tree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/TreeUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/TreeVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/randomtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/DecTree/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Descriptors/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/EnrichPlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/GrowComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/DistFunctions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/KNNClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/KNNModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/KNNRegressionModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/KNN/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/MLUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/MLUtils/VoteImg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/MLUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/MatOps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/ModelPackage
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/ModelPackage/PackageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/ModelPackage/Packager.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/ModelPackage/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/ModelPackage/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/NaiveBayes
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/NaiveBayes/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/NaiveBayes/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/ActFuncs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/NetNode.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/Network.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/Trainers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/architecture.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Neural/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/SLT
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/SLT/Risk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/SLT/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/SLT/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Scoring
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Scoring/Scoring.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Scoring/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Scoring/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/ScreenComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/files.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Numerics
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Numerics/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/RDConfig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/RDLogger.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/RDRandom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/SimDivFilters
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/SimDivFilters/SimilarityPickers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/SimDivFilters/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/SimDivFilters/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/TestRunner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/Filter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/Node.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/NodeLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/Output.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/Supply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/Transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/VLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/six.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PS/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PS/pidPS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Pyart
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Qt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Qt/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/ReportLab
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/SVG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/SVG/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/TK
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/TK/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/TK/pidTK.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/WX
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/WX/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/WX/pidWX.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/colors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/pagesizes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/patches
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/pid.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/stringformat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/pidtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/pstests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/testallps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/__pycache__/pidtest.cpython-311.pyc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/__pycache__/pstests.cpython-311.pyc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/tests/testallps.ps
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/util
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/util/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/sping/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/cactvs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/chemdraw.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/chemutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/comhack.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/fileutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/listutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/retest.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/utils/spiral.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts/Amadeus.ttf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts/Telex-Regular.ttf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts/amadeus_font_license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts/font_dumper.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts/roboto_regular_license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Fonts/telex_font_license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.props.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5K.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5k.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/run_tests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/test_set3.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/wehi_mols.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/wehi_pains.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/bench2.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.chk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example1.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example10.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example11.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example12.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example13.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example14.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example15.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example16.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example17.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example2.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example3.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example4.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example5.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example6.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example7.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example8.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example9.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cookbook.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInC++.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Overview.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/RDKit_Book.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/api-docs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/AmideBond.rxn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/chiral.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/input.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/invalid.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.test.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.train.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/test_multi_colours.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts/extapi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/Cc1ccccc1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molA.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molB.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molC.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molD.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molE.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molF.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molG.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_13_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_13_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_17_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_17_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_19_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_20_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_20_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_22_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_22_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_23_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_23_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_28_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_28_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_29_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_2_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_2_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_30_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_30_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_32_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_32_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_33_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_33_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_33_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_34_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_34_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_34_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_35_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_36_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_36_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_37_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_37_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_37_im2.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_38_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_39_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_3_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_6_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_6_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_6_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_8_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/ary_group.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_annotation_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_labels_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_labels_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_labels_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/indole1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/mol_metadata1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_ex1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_ex2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_missing1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_oh1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_oh2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_sp1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_sp2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_sp3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_sp4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_tb1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/nontetstereo_tb2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/parastereo_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/parastereo_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/potential_stereo_double_bond1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/potential_stereo_double_bond2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/potential_stereo_double_bond3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/query_atoms.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/query_bonds.2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/query_bonds.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553_2.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/reaction1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/reaction1_highlight.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_charges.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_crippen.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_rf.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/stereo_annotation.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/substruct_search_parameters1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2DQt.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.RegistrationHash.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rdScaffoldNetwork.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdAbbreviations.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCIPLabeler.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDeprotect.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDetermineBonds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdEHTTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMHFPFingerprint.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolEnumerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdTautomerQuery.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.cDataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.DistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rdForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rdGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clustering.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.cQuantize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rdAlignment.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rdSimDivPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rdBase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.six.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Install.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInPython.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/An_overview_of_the_RDKit_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Backwards_incompatible_changes_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Getting_Started_with_RDKit_in_Python_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Installation_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/RDKit_cookbook_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Supplementary_Text_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_Book_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_database_cartridge_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/introduction_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/terminology_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/CIPLabeling.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/CodingStandards.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/SGroups.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/gsocGeneralFileReader.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.lrg.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GA.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-Tests.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/compounds.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/RD.css
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/CalcLigRMSD.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/Examples_CalcLigRMSD.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/1C9_renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/1d4i_BEG.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/3m11_AKI.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/3w2c_N15.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/4i23_1C9.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/4i24_1C9.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/4uzh_JVE.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/5dpv.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/5dt0.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/6c83.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/ACP_crystal_aligned_1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/ACP_crystal_aligned_2.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/ACP_renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/AKI_renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/BEG_test.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/JVE_renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/N15_renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/SKE_crystal_aligned_1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/SKE_renamed.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/aurka_protein_2c6e.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/crystal_aligned.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_ACP_pH74_netcharge1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_AKI_pH74_netcharge1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_JVE_pH74_netcharge1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_N15_pH74_netcharge1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_2c6e_SKE_pH74_netcharge1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/docked_3w2p_1C9_pH74_netcharge1.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/data/lig_crystal_aligned.pdb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/1C9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/5dpv_complex.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/6c83_complex.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/AKI.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/BEG.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/JVE.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CalcLigRMSD/figures/N15.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/data/CHEMBL2321810.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/data/CHEMBL2321810_act.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/data/CHEMBL2321810_scaffold.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/freewilson.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/pytest.ini
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/requirements.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/setup.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/test
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/FreeWilson/test/test_freewilson.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/glare.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/ifg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/AddLabels.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/ClusterFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/CreateFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePredict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/BaseFeatures_DIP2_NoMicrospecies.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/Frames.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/FilterSet_NIBR2019_wPubChemExamples.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/SubstructureFilter_HitTriaging_wPubChemExamples.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/assignSubstructureFilters.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/examples/chembl24_structs_randomtestSample_100.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/examples/chembl24_structs_randomtestSample_100_out.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NIBRSubstructureFilters/filterExamples.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/npscorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/publicnp.model.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/demo.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/pbf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/cansmirk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/create_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_cansmirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_smi.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_smi_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_smart_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_smarts_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_fragmented.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_default.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxratio.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mol_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smiles_mol_trans.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks_mol_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_transfroms.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/indexing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/mol_transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/search_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/TestDbCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/loadErrors.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/AtomPairs.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Fingerprints.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Compounds.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Descriptors.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/test.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/CoordGen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdCoordGen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitga.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitga.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitga.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDExportMacros.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/ConcurrentQueue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail/float_functions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail/hash_float.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/extensions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash_fwd.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/rdBase.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDStreams/streams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Conrec.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ForceField/rdForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstanceGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/primes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/CDXMLParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/GeneralFileReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MultithreadedMolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MultithreadedSmilesMolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MultithreadedSDMolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/PNGParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGenericGroups.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGenericGroups.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGenericGroups.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/GenericGroups/GenericGroups.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/Enumerate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/CartesianProduct.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSample.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTautomerQuery.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTautomerQuery.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTautomerQuery.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/TautomerQuery/TautomerQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdTautomerQuery.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/BCUT.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AtomFeat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/OxidationNumbers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/EEM.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/PBF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/PMI.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RDF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MORSE.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/GETAWAY.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/WHIM.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/CoulombMat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MHFP.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMHFPFingerprint.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitO3AAlign.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitO3AAlign.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitO3AAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DJS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DHelpers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DCairo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCIPLabeler.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCIPLabeler.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCIPLabeler.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/CIPLabeler/CIPLabeler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/CIPLabeler/TooManyNodesException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdCIPLabeler.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDeprotect.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDeprotect.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDeprotect.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Deprotect/Deprotect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdDeprotect.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/PatternFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecompParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdchem.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdmolops.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdqueries.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ScaffoldNetwork/ScaffoldNetwork.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/Scaffolds/rdScaffoldNetwork.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolEnumerator.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolEnumerator.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolEnumerator.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolEnumerator/MolEnumerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolEnumerator/LinkNode.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdMolEnumerator.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAbbreviations.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAbbreviations.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAbbreviations.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Abbreviations/Abbreviations.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdAbbreviations.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/NullQueryAlgebra.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/OrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/Query.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/DistPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/LeaderPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2023.03.3
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/Chem/rdChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages/rdkit/RDPaths.py
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
mkdir -p /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3
mv /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11/site-packages /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3.11
ln -sf /usr/share/fonts/truetype/freefont/FreeSans.ttf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
dh_install -ppython3-rdkit /usr/lib/python3
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/docs/
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
dh_numpy3
dh_install
mkdir -p /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp /<<PKGBUILDDIR>>/Docs/Book/_build/latex/RDKit.pdf /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /<<PKGBUILDDIR>>/Docs/Book/_build/html /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
pg_buildext install /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v postgresql-%v-rdkit
supported-versions: WARNING! Unknown distribution ID in /etc/os-release: raspbian
debian found in ID_LIKE, treating as Debian
### PostgreSQL 16 install ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-16'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/share/postgresql/16/extension'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/share/postgresql/16/extension'
/usr/bin/install -c -m 755  rdkit.so '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/rdkit.so'
/usr/bin/install -c -m 644 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.control '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/share/postgresql/16/extension/'
/usr/bin/install -c -m 644  rdkit--4.3.0.sql '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/share/postgresql/16/extension/'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode/rdkit'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/
/usr/bin/install -c -m 644 rdkit_io.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 mol_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 sfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rxn_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rdkit_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gin.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 low_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 guc.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 cache.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 adapter.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bitstring.bc '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode'/rdkit/./
cd '/<<PKGBUILDDIR>>/debian/postgresql-16-rdkit/usr/lib/postgresql/16/lib/bitcode' && /usr/lib/llvm-15/bin/llvm-lto -thinlto -thinlto-action=thinlink -o rdkit.index.bc rdkit/rdkit_io.bc rdkit/mol_op.bc rdkit/bfp_op.bc rdkit/sfp_op.bc rdkit/rxn_op.bc rdkit/rdkit_gist.bc rdkit/bfp_gist.bc rdkit/bfp_gin.bc rdkit/low_gist.bc rdkit/guc.bc rdkit/cache.bc rdkit/adapter.bc rdkit/bitstring.bc
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-16'
### End 16 install ###
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/cppapi/jquery.js
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/jquery.js
ln -sf /usr/share/javascript/underscore/underscore.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/underscore.js
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=cmake
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_python3
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_python3 -ppython3-rdkit
I: dh_python3 fs:424: renaming rdBase.so to rdBase.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdAbbreviations.so to rdAbbreviations.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdCIPLabeler.so to rdCIPLabeler.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdChemReactions.so to rdChemReactions.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdChemicalFeatures.so to rdChemicalFeatures.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdCoordGen.so to rdCoordGen.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdDepictor.so to rdDepictor.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdDeprotect.so to rdDeprotect.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdDistGeom.so to rdDistGeom.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdFMCS.so to rdFMCS.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMHFPFingerprint.so to rdMHFPFingerprint.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMMPA.so to rdMMPA.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolAlign.so to rdMolAlign.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolCatalog.so to rdMolCatalog.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolDescriptors.so to rdMolDescriptors.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolEnumerator.so to rdMolEnumerator.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolHash.so to rdMolHash.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolInterchange.so to rdMolInterchange.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolTransforms.so to rdMolTransforms.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdPartialCharges.so to rdPartialCharges.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdReducedGraphs.so to rdReducedGraphs.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdSLNParse.so to rdSLNParse.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdShapeHelpers.so to rdShapeHelpers.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdSubstructLibrary.so to rdSubstructLibrary.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdTautomerQuery.so to rdTautomerQuery.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdchem.so to rdchem.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdfiltercatalog.so to rdfiltercatalog.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdfragcatalog.so to rdfragcatalog.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdmolfiles.so to rdmolfiles.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdmolops.so to rdmolops.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdqueries.so to rdqueries.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdtrajectory.so to rdtrajectory.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolDraw2D.so to rdMolDraw2D.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMolStandardize.so to rdMolStandardize.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdScaffoldNetwork.so to rdScaffoldNetwork.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming cDataStructs.so to cDataStructs.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming DistGeom.so to DistGeom.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdForceField.so to rdForceField.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdGeometry.so to rdGeometry.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming Clustering.so to Clustering.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming cQuantize.so to cQuantize.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdInfoTheory.so to rdInfoTheory.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdAlignment.so to rdAlignment.cpython-311-arm-linux-gnueabihf.so
I: dh_python3 fs:424: renaming rdSimDivPickers.so to rdSimDivPickers.cpython-311-arm-linux-gnueabihf.so
dh_numpy3 -ppython3-rdkit
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installsystemduser -a -O--buildsystem=cmake
   dh_lintian -a -O--buildsystem=cmake
   dh_perl -a -O--buildsystem=cmake
   dh_link -a -O--buildsystem=cmake
   dh_strip_nondeterminism -a -O--buildsystem=cmake
   dh_compress -a -O--buildsystem=cmake
   dh_fixperms -a -O--buildsystem=cmake
   debian/rules override_dh_missing
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_missing --list-missing
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config-version.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets-none.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example1.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example10.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example11.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example12.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example13.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example14.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example15.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example16.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example17.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example2.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example3.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example4.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example5.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example6.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example7.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example8.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example9.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Cartridge.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Cookbook.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInC++.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInPython.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Install.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Makefile exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Overview.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/RDKit_Book.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/api-docs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/conf.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/AmideBond.rxn exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.smi exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/cdk2.sdf exists in debian/tmp but is not installed to anywhere 
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dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-Tests.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/compounds.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/README exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/test.sh exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere 
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (56), librdkit1 (110), postgresql-16-rdkit (0), python3-rdkit (1), rdkit-data (3), rdkit-doc (0)
	 * dh_installdocs: librdkit-dev (0), librdkit1 (0), postgresql-16-rdkit (0), python3-rdkit (0), rdkit-data (0), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	If the omission is intentional or no other helper can take care of this consider adding the
	paths to debian/not-installed.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_dwz -a -O--buildsystem=cmake
   dh_strip -a -O--buildsystem=cmake
   dh_makeshlibs -a -O--buildsystem=cmake
   dh_shlibdeps -a -O--buildsystem=cmake
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFileParsers.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeneral.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAbbreviations.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFMCS.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceField.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMMPA.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructLibrary.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTautomerQuery.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFragCatalog.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGenericGroups.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSmilesParse.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRGroupDecomposition.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolHash.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDescriptors.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitShapeHelpers.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolEnumerator.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeometryLib.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitPartialCharges.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolCatalog.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitO3AAlign.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructMatch.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitga.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDeprotect.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitScaffoldNetwork.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCatalogs.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolChemicalFeatures.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCIPLabeler.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDepictor.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFingerprints.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemicalFeatures.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolTransforms.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSimDivPickers.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolInterchange.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTrajectory.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGraphMol.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAlignment.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemReactions.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFilterCatalog.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitReducedGraphs.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolStandardize.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolDraw2D.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDBoost.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubgraphs.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemTransforms.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitEigenSolvers.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitInfoTheory.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDataStructs.so.1.2023.03.3 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSLNParse.so.1.2023.03.3 found in none of the libraries
   dh_installdeb -a -O--buildsystem=cmake
   dh_gencontrol -a -O--buildsystem=cmake
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: Provides field of package python3-rdkit: substitution variable ${python3:Provides} used, but is not defined
dpkg-gencontrol: warning: package postgresql-16-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit-dev: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-16-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: Provides field of package python3-rdkit: substitution variable ${python3:Provides} used, but is not defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake
   dh_builddeb -a -O--buildsystem=cmake
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_202303.3-3_armhf.deb'.
dpkg-deb: building package 'librdkit1' in '../librdkit1_202303.3-3_armhf.deb'.
dpkg-deb: building package 'python3-rdkit' in '../python3-rdkit_202303.3-3_armhf.deb'.
dpkg-deb: building package 'postgresql-16-rdkit-dbgsym' in '../postgresql-16-rdkit-dbgsym_202303.3-3_armhf.deb'.
dpkg-deb: building package 'postgresql-16-rdkit' in '../postgresql-16-rdkit_202303.3-3_armhf.deb'.
dpkg-deb: building package 'librdkit1-dbgsym' in '../librdkit1-dbgsym_202303.3-3_armhf.deb'.
dpkg-deb: building package 'python3-rdkit-dbgsym' in '../python3-rdkit-dbgsym_202303.3-3_armhf.deb'.
 dpkg-genbuildinfo --build=any -O../rdkit_202303.3-3_armhf.buildinfo
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> -O../rdkit_202303.3-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-09-29T11:09:09Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


rdkit_202303.3-3_armhf.changes:
-------------------------------

Format: 1.8
Date: Thu, 21 Sep 2023 10:44:34 +0200
Source: rdkit
Binary: librdkit-dev librdkit1 librdkit1-dbgsym postgresql-16-rdkit postgresql-16-rdkit-dbgsym python3-rdkit python3-rdkit-dbgsym
Architecture: armhf
Version: 202303.3-3
Distribution: trixie-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Christoph Berg <myon@debian.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1  - Collection of cheminformatics and machine-learning software (shar
 postgresql-16-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python3-rdkit - Collection of cheminformatics and machine-learning software
Changes:
 rdkit (202303.3-3) unstable; urgency=medium
 .
   * Source-only team upload.
Checksums-Sha1:
 cd608779489e0e8966a4dfb8d8d24b53c8bb6772 395284 librdkit-dev_202303.3-3_armhf.deb
 87a6bd405736d5da4ce1a0dc487ae32a5aec3c6d 94143528 librdkit1-dbgsym_202303.3-3_armhf.deb
 77c5a1dbd8b08348300de6e39cb44ccc1522202b 3663596 librdkit1_202303.3-3_armhf.deb
 63c12e9b621d11b1c9ffb97ed8631d67b514e45d 782708 postgresql-16-rdkit-dbgsym_202303.3-3_armhf.deb
 167490449daf7cad2dd71a69407d699148fd2e19 389916 postgresql-16-rdkit_202303.3-3_armhf.deb
 456c3962adaa08927ed5a087d0ea52df87e14fa7 52880808 python3-rdkit-dbgsym_202303.3-3_armhf.deb
 8149c96a1dc6bfd1dbe5d1328daf0bf5234711d0 3857880 python3-rdkit_202303.3-3_armhf.deb
 ad3d3a155f1dd800d9d7f89c4a92ee75e8f74b33 16893 rdkit_202303.3-3_armhf.buildinfo
Checksums-Sha256:
 9b320acbc1bca69d6e2da826d06fca360e4f3c13241a11fd844ed11ad1c71f14 395284 librdkit-dev_202303.3-3_armhf.deb
 fd90a423b81c6a1c20265035333c37c2faf9adb1a38c50c7bc465a94f9ba62a2 94143528 librdkit1-dbgsym_202303.3-3_armhf.deb
 81fe4f7b42717b085d452cec63a04b0f2d1e31fa5196025771ab4a2ddf03b9a1 3663596 librdkit1_202303.3-3_armhf.deb
 f2acc10209f04f400ae90db30a04eab81a958f4c576caccab51b65cbbe070c45 782708 postgresql-16-rdkit-dbgsym_202303.3-3_armhf.deb
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Files:
 6a777442db95a525f737db270dbf94dc 395284 libdevel optional librdkit-dev_202303.3-3_armhf.deb
 152b2d4f090172cb1b0ec7e3eaf5309f 94143528 debug optional librdkit1-dbgsym_202303.3-3_armhf.deb
 278bf6aefd30b768706d22e67eba26c5 3663596 libs optional librdkit1_202303.3-3_armhf.deb
 0dc85ce6813ea01a9fc436cc411b6f5d 782708 debug optional postgresql-16-rdkit-dbgsym_202303.3-3_armhf.deb
 0ce309ec7195f59b2d5b319128f1c0d9 389916 database optional postgresql-16-rdkit_202303.3-3_armhf.deb
 09a53a78b4daad0d894e47df3a89dd00 52880808 debug optional python3-rdkit-dbgsym_202303.3-3_armhf.deb
 2b8b84ab16eda6fd4b9b5d4080d7761a 3857880 python optional python3-rdkit_202303.3-3_armhf.deb
 fe84103f430b542a618c98f331a1b452 16893 science optional rdkit_202303.3-3_armhf.buildinfo

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


librdkit-dev_202303.3-3_armhf.deb
---------------------------------

 new Debian package, version 2.0.
 size 395284 bytes: control archive=9648 bytes.
    1502 bytes,    37 lines      control              
   27536 bytes,   325 lines      md5sums              
 Package: librdkit-dev
 Source: rdkit
 Version: 202303.3-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 2222
 Depends: librdkit1 (= 202303.3-3)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2023-09-21 08:44 ./
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/rdkit/CIPLabeler/
-rw-r--r-- root/root      2759 2023-08-17 03:58 ./usr/include/rdkit/CIPLabeler/CIPLabeler.h
-rw-r--r-- root/root       628 2023-08-17 03:58 ./usr/include/rdkit/CIPLabeler/TooManyNodesException.h
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     15920 2023-08-17 03:58 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1384 2023-08-17 03:58 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1243 2023-08-17 03:58 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1052 2023-08-17 03:58 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2936 2023-08-17 03:58 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitFingerprints.so -> libRDKitFingerprints.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitForceField.so -> libRDKitForceField.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitForceFieldHelpers.so -> libRDKitForceFieldHelpers.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitFragCatalog.so -> libRDKitFragCatalog.so.1
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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitGraphMol.so -> libRDKitGraphMol.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitInfoTheory.so -> libRDKitInfoTheory.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMolEnumerator.so -> libRDKitMolEnumerator.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMolInterchange.so -> libRDKitMolInterchange.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitMolStandardize.so -> libRDKitMolStandardize.so.1
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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitRGroupDecomposition.so -> libRDKitRGroupDecomposition.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitReducedGraphs.so -> libRDKitReducedGraphs.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSLNParse.so -> libRDKitSLNParse.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitScaffoldNetwork.so -> libRDKitScaffoldNetwork.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitTautomerQuery.so -> libRDKitTautomerQuery.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitga.so -> libRDKitga.so.1
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/librdkit-dev/
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librdkit1-dbgsym_202303.3-3_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 94143528 bytes: control archive=3076 bytes.
    2578 bytes,    12 lines      control              
    5919 bytes,    56 lines      md5sums              
 Package: librdkit1-dbgsym
 Source: rdkit
 Version: 202303.3-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 96604
 Depends: librdkit1 (= 202303.3-3)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1
 Build-Ids: 068b8ca8677c3dff40df4588dca1bd4693e176c3 12ae0f98ce814137c4a0bce83bc568d0bdbdeeff 182571d0c71fc4d0876ae279f40b3da42bcd660a 1b08a0c49f497c94b6dc59a93a3b2c5b628b480c 1f2dd947ed2a913c1d109f2c341f50989788c10f 2048df9dda3e714a5ed64e1cf79a0c00a9904039 221e05d9d03205a3e805c128f01fe27eaab5a93f 255025d45feacda55ebc1b86f29e188be6326d37 25f54c5bc2b054d975525b327c6f9f8393f978c9 26518fd895c1d94723bf81010eeee2fd29cfd93a 2a4c476118e9136f4c5fc0be4adccf60aae85138 2b6913f90aa478ab50803c52de7931192463dbea 307e91f9346b7c7a7cb9207628f96772002cf7cb 313cc076028dd2a308d442387461c04804f1293d 3ae4893ff7e4df50339b1f629b9f37aaf7e63671 3db46dec889e514e9175159c5b09cf739a7b4ce9 4470da79a417891681e296a61c6f1a1148d7ba7a 47fc5e16fc27095d6a92147f7ec29fe06af3ca48 4dcd94f93e13d3affa82ea8f37af743e6bc8ef77 53c3428cd746098d588c020bb79ed8f0934c1646 5beee40b8e36b45f5f3922c756664791e07209f7 5f208af2386b551563bbdbc80565d14825ead737 62b312d296a0c34e340515b57b3a9c14d4789df8 630b4b18296acfa1ee1a077e6d7e6b325a5ac581 6a56b85228be929b13ab79bfa24791e79bd537fa 6b3d4d94736fef7ef4060ee6ee6ee1568affe71d 72e97d6d1b68b20bff41f7b6345574e4e65d106d 73ea402fbe1c4f1bd5be87f6b4f6c2306e8e19cc 74da3c5db6b5e4ba27d7098762f4a8e0e1af4e60 86ab63086a36f8b5df6433a1a79c88eeabaf1d8e 888a278e5e09bd858bf6b8ea0a9d8fff8917bcd3 8ac05786681c90d70daa182b6df4efe48c253746 8dd359056895b22a7f45557476aded15ff45225c 9341bcaebe219851b4df6f7dfdb125f73addf63e 9354642c6811ba6a0974002fe2081c728acbd8bd 93a744ac1f439ea9fb956010fa0bce11bbaa509e 9fb5ef7fcc5a3c2973c25e6078802bb15febbd0f a397a39cee1499176a39b413a063974f194c7a6a a3f5bcc88b326ed551a30a56adfcb5da00b81277 a5835de8452b1ef9d879d0ef3259f13a55f4936b a8613bf13b13ad86064b133803e0ffc041ddb313 a9a187bf0959c6df1213a37e706a13a0be074567 af0c7e87df747909b9379eac5e5a170cb2b64977 b4a5de17807aec010d7aa5e3e93e005b7f350198 b78493f586a86904ad78f59667d73406dcb7c296 b8c90d9b2448fbdffc1a79d5296895899d97ebfe b93f5703faaa67459784ef30a26038e5c8f336c0 bf3edcd088380513631f765af5260cf47e6710e7 bf60e678eb8418b98de09fbb3a7e0b2fd93e5343 c84f4c3e439d4a9dac06dbd79be6b0a710ae683b cf622ba02868eb1aca4bb332949fc0855461bf8f d1b7254217206f90c10321742e76db3a5dbe0f24 e6a77c3ec45fda8f2b3293eae81317a2a4d300dd f8d575ee5538de07fa88f6f4b31a5f91e47a398a f96c7c16487f5a947beff5405d1a051904be3c85

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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/share/doc/librdkit1-dbgsym -> librdkit1


librdkit1_202303.3-3_armhf.deb
------------------------------

 new Debian package, version 2.0.
 size 3663596 bytes: control archive=3204 bytes.
    1812 bytes,    37 lines      control              
    4526 bytes,    59 lines      md5sums              
    2532 bytes,    55 lines      shlibs               
      68 bytes,     2 lines      triggers             
 Package: librdkit1
 Source: rdkit
 Version: 202303.3-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 16241
 Depends: libboost-iostreams1.74.0 (>= 1.74.0+ds1), libboost-python1.74.0 (>= 1.74.0+ds1), libboost-python1.74.0-py311, libboost-serialization1.74.0 (>= 1.74.0+ds1), libc6 (>= 2.34), libcairo2 (>= 1.4.10), libcoordgen3 (>= 3.0.2), libfreetype6 (>= 2.2.1), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.3.1), libpython3.11 (>= 3.11.5), libstdc++6 (>= 12)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitCIPLabeler.so.1 -> libRDKitCIPLabeler.so.1.2023.03.3
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lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2023.03.3
-rw-r--r-- root/root    255524 2023-09-21 08:44 ./usr/lib/libRDKitSubstructMatch.so.1.2023.03.3
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitTautomerQuery.so.1 -> libRDKitTautomerQuery.so.1.2023.03.3
-rw-r--r-- root/root    149028 2023-09-21 08:44 ./usr/lib/libRDKitTautomerQuery.so.1.2023.03.3
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2023.03.3
-rw-r--r-- root/root     63036 2023-09-21 08:44 ./usr/lib/libRDKitTrajectory.so.1.2023.03.3
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKitga.so.1 -> libRDKitga.so.1.2023.03.3
-rw-r--r-- root/root     17956 2023-09-21 08:44 ./usr/lib/libRDKitga.so.1.2023.03.3
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2023.03.3
-rw-r--r-- root/root      9608 2023-09-21 08:44 ./usr/lib/libRDKithc.so.1.2023.03.3
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/librdkit1/
-rw-r--r-- root/root      3066 2023-09-21 08:44 ./usr/share/doc/librdkit1/changelog.Debian.gz
-rw-r--r-- root/root    105912 2023-08-17 03:58 ./usr/share/doc/librdkit1/changelog.gz
-rw-r--r-- root/root      6705 2023-09-20 14:24 ./usr/share/doc/librdkit1/copyright
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/lintian/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       424 2023-09-20 14:24 ./usr/share/lintian/overrides/librdkit1


postgresql-16-rdkit-dbgsym_202303.3-3_armhf.deb
-----------------------------------------------

 new Debian package, version 2.0.
 size 782708 bytes: control archive=540 bytes.
     392 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: postgresql-16-rdkit-dbgsym
 Source: rdkit
 Version: 202303.3-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 832
 Depends: postgresql-16-rdkit (= 202303.3-3)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-16-rdkit
 Build-Ids: 1440ea8b9a552b2bed7a107a0c0019c30af15717

drwxr-xr-x root/root         0 2023-09-21 08:44 ./
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/debug/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/debug/.build-id/14/
-rw-r--r-- root/root    841416 2023-09-21 08:44 ./usr/lib/debug/.build-id/14/40ea8b9a552b2bed7a107a0c0019c30af15717.debug
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/
lrwxrwxrwx root/root         0 2023-09-21 08:44 ./usr/share/doc/postgresql-16-rdkit-dbgsym -> postgresql-16-rdkit


postgresql-16-rdkit_202303.3-3_armhf.deb
----------------------------------------

 new Debian package, version 2.0.
 size 389916 bytes: control archive=1692 bytes.
    1576 bytes,    37 lines      control              
    1669 bytes,    20 lines      md5sums              
 Package: postgresql-16-rdkit
 Source: rdkit
 Version: 202303.3-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 869
 Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), librdkit1 (>= 202303.3), libstdc++6 (>= 5.2), postgresql-16
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

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drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/postgresql/
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drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/
-rw-r--r-- root/root     37912 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit.index.bc
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/
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-rw-r--r-- root/root     17400 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/bfp_op.bc
-rw-r--r-- root/root      8368 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/bitstring.bc
-rw-r--r-- root/root     15472 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/cache.bc
-rw-r--r-- root/root     15712 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/guc.bc
-rw-r--r-- root/root     14036 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/low_gist.bc
-rw-r--r-- root/root     42680 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/mol_op.bc
-rw-r--r-- root/root     20108 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/rdkit_gist.bc
-rw-r--r-- root/root     26504 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/rdkit_io.bc
-rw-r--r-- root/root     10208 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/rxn_op.bc
-rw-r--r-- root/root     15268 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/bitcode/rdkit/sfp_op.bc
-rw-r--r-- root/root    189964 2023-09-21 08:44 ./usr/lib/postgresql/16/lib/rdkit.so
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/postgresql-16-rdkit/
-rw-r--r-- root/root      3067 2023-09-21 08:44 ./usr/share/doc/postgresql-16-rdkit/changelog.Debian.gz
-rw-r--r-- root/root    105912 2023-08-17 03:58 ./usr/share/doc/postgresql-16-rdkit/changelog.gz
-rw-r--r-- root/root      6705 2023-09-20 14:24 ./usr/share/doc/postgresql-16-rdkit/copyright
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/postgresql/16/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/postgresql/16/extension/
-rw-r--r-- root/root     48019 2023-09-21 08:44 ./usr/share/postgresql/16/extension/rdkit--4.3.0.sql
-rw-r--r-- root/root       137 2023-09-21 08:44 ./usr/share/postgresql/16/extension/rdkit.control


python3-rdkit-dbgsym_202303.3-3_armhf.deb
-----------------------------------------

 new Debian package, version 2.0.
 size 52880808 bytes: control archive=2828 bytes.
    2344 bytes,    12 lines      control              
    5287 bytes,    50 lines      md5sums              
 Package: python3-rdkit-dbgsym
 Source: rdkit
 Version: 202303.3-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 61352
 Depends: python3-rdkit (= 202303.3-3)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-rdkit
 Build-Ids: 0d0c84101a4113d1e04340ca84a18d1aaf4c5f97 115f37f447c868c3c6c3657052d46093535f8cf8 12183a3c0437a2163f8f97c087bee23dc22b2a06 14e2f84646af924a473f1b2c2417b6e9a3e34b84 20853027218888416010bab24ad2b17b364102eb 28c7921fcccd7f9f33b325b3fe951ca077621315 44672e8561e9b076d0468d2cdb47707c8b2e9528 4584c9e960782c490f7d25f9a8499a31d0e38d5a 4ed3abc5976d343507ce633fe9b7f26ac012e0f7 5175f0f10a8b51199caad673b895f21f60d75b9f 51eddbbff0ed1fc4c41084f02f7ab5eed9db829a 55b2712115be719dc907fadcb9d50aeb6b8b9043 5606ad5afd2194e0d4edbf21fa58f6c69767df63 56de4bd1d22121c9ed994ff006162a0b5fba936a 5a78e5e705ea043ea2462f7c9550ac42fee04ce2 6f8d5e4d29724289d655586653e3727ad28c9164 7586b36703e8f3e8d988d09d7463c06615834969 7815e10295bb9b4ea8811216a7c4a6ee571732a3 7c45b172d11078bd6f9b6c7d73fb2f045a5107ac 7ce801e391dec4703461bc7503dac5ea1198926e 7fe98fbf8cc3f8acd68e57840f136e1343e29c84 87bf6970973f13d494c22e54a9418fef016066c6 8ffbce56319f96f9b07a6853ad2eeafb7d67176e 915fde83a734c9739ca707609e525cc1a0561bb1 981a41916c54c56164e9b53c7868929da94cea8c 98ff031785012004911eb089ddea007b550619b2 9f25b50d4227d9c565ccd8be8b6725ea48990547 a517b75219bd10c5acb1b914803503280a0c2e32 a669f2d7f9efe611e5bd3cbfc66f158509e5273c a83e66b5f2ee8a63a25a16768fc906620692eb3b abec9e1cf3f6e7d26eeca8ee729052f1b260589b aca57914a29b766fa1933993ffd1c9b3adef0f1a b1d9aef0dcb389afeeec3b3faac7639d25721c85 b9c05f821602b32650820c2f1e43ae6847d7764b bfb10f53539226f689978e3645be5fbe614ab755 c1a6dcdb133956c93b208872b64c2e830a913d28 c5a7af30b913cd3f59dd54a89fba8cda1f7bf191 c6a034572b057097f0f66584d3becc27441e5567 cc240695e5fde182cebdbbe1897bf0ca635ecbfa cd66519217117a9a7219b9d0acc0b5ed06808fd9 d0eea9c45aa96ee60503b0aaf490a560139891b1 df450dc6279eb9b132fe582171e6fcc9f7f45ee5 e1cf00293b0629c244b77e8d3dcc2ae30db52265 e5af85a8367acf6ef3bf5594b88797478fcec45d e6f298005836b7403d2c0982bbab6e7786badf5b e79414d9f8e3a39c6fad1a6e477fffcf37f85721 e8bbc16d5c76d76b0da54cd19a4a35f45fc776ba e90df8d5655b884ab3070726fe447a02dc96abce f8b9a8069af2cc07941de3d27b44b19cf8cb5a04

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python3-rdkit_202303.3-3_armhf.deb
----------------------------------

 new Debian package, version 2.0.
 size 3857880 bytes: control archive=12836 bytes.
    1836 bytes,    36 lines      control              
   46049 bytes,   462 lines      md5sums              
     273 bytes,    12 lines   *  postinst             #!/bin/sh
     386 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-rdkit
 Source: rdkit
 Version: 202303.3-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 28839
 Depends: fonts-freefont-ttf, rdkit-data, python3 (<< 3.12), python3 (>= 3.11~), python3-numpy (>= 1:1.22.0), python3-numpy-abi9, python3:any, libboost-python1.74.0 (>= 1.74.0+ds1), libboost-python1.74.0-py311, libboost-serialization1.74.0 (>= 1.74.0+ds1), libc6 (>= 2.34), libcairo2 (>= 1.4.10), libcoordgen3 (>= 3.0.2), libgcc-s1 (>= 3.5), libpython3.11 (>= 3.11.5), librdkit1 (>= 202303.3), libstdc++6 (>= 11)
 Suggests: rdkit-doc
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.

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drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/
drwxr-xr-x root/root         0 2023-09-21 08:44 ./usr/share/doc/python3-rdkit/
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+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 4559916
Build-Time: 24831
Distribution: trixie-staging
Host Architecture: armhf
Install-Time: 4089
Job: rdkit_202303.3-3
Machine Architecture: armhf
Package: rdkit
Package-Time: 28999
Source-Version: 202303.3-3
Space: 4559916
Status: successful
Version: 202303.3-3
--------------------------------------------------------------------------------
Finished at 2023-09-29T11:09:09Z
Build needed 08:03:19, 4559916k disc space

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