Raspbian Package Auto-Building

rdkit → 202003.4-4+b1 → armhf → 2020-12-12 06:05:23

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04

+==============================================================================+
| rdkit 202003.4-4+b1 (armhf)                  Sat, 12 Dec 2020 00:13:32 +0000 |
+==============================================================================+

Package: rdkit
Version: 202003.4-4+b1
Source Version: 202003.4-4
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-44db64b2-17d6-468e-af6f-819025443c4a' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [12.0 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [13.0 MB]
Fetched 24.9 MB in 25s (987 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'rdkit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/rdkit.git
Please use:
git clone https://salsa.debian.org/debichem-team/rdkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 53.0 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main rdkit 202003.4-4 (dsc) [2782 B]
Get:2 http://172.17.0.1/private bullseye-staging/main rdkit 202003.4-4 (tar) [52.9 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main rdkit 202003.4-4 (diff) [99.9 kB]
Fetched 53.0 MB in 5s (11.0 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/rdkit-FXK9Z4/rdkit-202003.4' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/rdkit-FXK9Z4' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-UuxXRN/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-UuxXRN/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-UuxXRN/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2566 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  bsdextrautils krb5-locales libnss-nis libnss-nisplus libpam-cap netbase
  sensible-utils
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (20.8 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12776 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libcoordgen-dev, libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-numpy, python3-pandas, python3-pil | python3-imaging, python3-recommonmark, python3-sphinx, rapidjson-dev, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Filtered Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libcoordgen-dev, libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-numpy, python3-pandas, python3-pil, python3-recommonmark, python3-sphinx, rapidjson-dev, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
dpkg-deb: building package 'sbuild-build-depends-rdkit-dummy' in '/<<BUILDDIR>>/resolver-UuxXRN/apt_archive/sbuild-build-depends-rdkit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-rdkit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Sources [704 B]
Get:5 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ Packages [769 B]
Fetched 2806 B in 1s (3418 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install rdkit build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  krb5-locales libnss-nis libnss-nisplus libpam-cap
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bison ca-certificates clang-11
  cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  docutils-common doxygen dwz file flex fontconfig fontconfig-config
  fonts-dejavu-core fonts-lmodern gettext gettext-base groff-base
  hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libaom0 libapache-pom-java
  libarchive-zip-perl libarchive13 libblas3 libboost-atomic1.71-dev
  libboost-atomic1.71.0 libboost-chrono1.71-dev libboost-chrono1.71.0
  libboost-date-time1.71-dev libboost-date-time1.71.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.71-dev libboost-python-dev
  libboost-python1.71-dev libboost-python1.71.0 libboost-regex-dev
  libboost-regex1.71-dev libboost-regex1.71.0 libboost-serialization1.71-dev
  libboost-serialization1.71.0 libboost-system-dev libboost-system1.71-dev
  libboost-system1.71.0 libboost-thread-dev libboost-thread1.71-dev
  libboost-thread1.71.0 libboost1.71-dev libbrotli1 libbsd0 libcairo-gobject2
  libcairo2 libclang-common-11-dev libclang-cpp11 libclang1-11
  libcmark-gfm-extensions0 libcmark-gfm0 libcommons-logging-java
  libcommons-parent-java libcoordgen-dev libcoordgen1 libcroco3 libcurl4
  libdatrie1 libdav1d4 libde265-0 libdebhelper-perl libedit2 libelf1 libexpat1
  libexpat1-dev libffi-dev libfftw3-double3 libfile-stripnondeterminism-perl
  libfontbox-java libfontconfig1 libfreetype6 libfribidi0 libgc1
  libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
  libgraphite2-3 libharfbuzz0b libheif1 libice6 libicu-dev libicu67
  libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc
  libjs-underscore libjsoncpp24 libkpathsea6 liblapack3 liblcms2-2 libllvm11
  liblqr-1-0 libltdl7 libmaeparser-dev libmaeparser1 libmagic-mgc libmagic1
  libmagickcore-6.q16-6 libmagickwand-6.q16-6 libncurses-dev libncurses6
  libnghttp2-14 libobjc-10-dev libobjc4 libopenjp2-7 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
  libpdfbox-java libpfm4 libpipeline1 libpixman-1-0 libpng16-16 libpq-dev
  libpq5 libprocps8 libpsl5 libptexenc1 libpython3-dev libpython3-stdlib
  libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib
  librhash0 librsvg2-2 librsvg2-bin librtmp1 libsigsegv2 libsm6 libsqlite3-dev
  libssh2-1 libsub-override-perl libsynctex2 libteckit0 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtool
  libuchardet0 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx265-192 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6
  libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libyaml-0-2
  libz3-4 libz3-dev libzzip-0-13 llvm-11 llvm-11-dev llvm-11-runtime
  llvm-11-tools m4 mailcap man-db media-types mime-support node-jquery openssl
  pandoc pandoc-data po-debconf postgresql-client-13 postgresql-client-common
  postgresql-common postgresql-server-dev-13 postgresql-server-dev-all
  preview-latex-style procps python-babel-localedata python3 python3-alabaster
  python3-babel python3-certifi python3-chardet python3-commonmark
  python3-dateutil python3-dev python3-distutils python3-docutils python3-idna
  python3-imagesize python3-jinja2 python3-lib2to3 python3-markupsafe
  python3-minimal python3-numpy python3-packaging python3-pandas
  python3-pandas-lib python3-pil python3-pkg-resources python3-pygments
  python3-pyparsing python3-recommonmark python3-requests python3-roman
  python3-six python3-snowballstemmer python3-sphinx python3-tz
  python3-urllib3 python3-yaml python3.9 python3.9-dev python3.9-minimal
  rapidjson-dev sgml-base shared-mime-info sphinx-common ssl-cert t1utils
  tex-common texlive-base texlive-binaries texlive-fonts-recommended
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures ucf x11-common xdg-utils xml-core zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc clang-11-doc cmake-doc
  ninja-build dh-make doxygen-latex doxygen-doc doxygen-gui graphviz flex-doc
  gettext-doc libasprintf-dev libgettextpo-dev groff imagemagick-doc autotrace
  cups-bsd | lpr | lprng curl enscript ffmpeg gimp gnuplot grads hp2xx html2ps
  libwmf-bin mplayer povray radiance sane-utils transfig ufraw-batch
  ghostscript lrzip libboost-doc libboost1.71-doc gccxml
  libboost-container1.71-dev libboost-context1.71-dev
  libboost-contract1.71-dev libboost-coroutine1.71-dev
  libboost-exception1.71-dev libboost-fiber1.71-dev
  libboost-filesystem1.71-dev libboost-graph1.71-dev
  libboost-graph-parallel1.71-dev libboost-locale1.71-dev libboost-log1.71-dev
  libboost-math1.71-dev libboost-mpi1.71-dev libboost-mpi-python1.71-dev
  libboost-numpy1.71-dev libboost-program-options1.71-dev
  libboost-random1.71-dev libboost-stacktrace1.71-dev libboost-test1.71-dev
  libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev
  libboost1.71-tools-dev libmpfrc++-dev libntl-dev libavalon-framework-java
  libcommons-logging-java-doc libexcalibur-logkit-java liblog4j1.2-java
  libfftw3-bin libfftw3-dev icu-doc liblcms2-utils libmagickcore-6.q16-6-extra
  ncurses-doc postgresql-doc-13 sqlite3-doc libtool-doc gfortran
  | fortran95-compiler gcj-jdk llvm-11-doc m4-doc apparmor less www-browser
  texlive-xetex texlive-luatex pandoc-citeproc context wkhtmltopdf ghc nodejs
  php python ruby r-base-core libjs-mathjax node-katex
  citation-style-language-styles libmail-box-perl postgresql-13 libjson-perl
  python3-doc python3-tk python3-venv docutils-doc fonts-linuxlibertine
  | ttf-linux-libertine texlive-lang-french python-jinja2-doc gfortran
  python-numpy-doc python3-pytest python3-numpy-dbg python-pandas-doc
  python3-statsmodels python-pil-doc python3-pil-dbg python3-setuptools
  python-pygments-doc ttf-bitstream-vera python-pyparsing-doc
  python3-cryptography python3-openssl python3-socks python-requests-doc
  python3-stemmer dvipng fonts-freefont-otf python3-sphinx-rtd-theme
  sphinx-doc texlive-plain-generic python3.9-venv python3.9-doc binfmt-support
  rapidjson-doc sgml-base-doc openssl-blacklist gv | postscript-viewer perl-tk
  xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc texlive-latex-base-doc
  icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl
  texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks
  dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
  libomp-11-dev libfl-dev curl | wget | lynx libmagickcore-6.q16-6-extra
  ghostscript netpbm xpdf | pdf-viewer gv | postscript-viewer
  libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs
  javascript-common gsfonts libgpm2 publicsuffix librsvg2-common libltdl-dev
  binfmt-support libjs-sizzle libmail-sendmail-perl logrotate psmisc
  python3-scipy python3-matplotlib python3-bottleneck python3-numexpr
  python3-odf python3-openpyxl python3-xlrd python3-xlwt python3-bs4
  python3-html5lib python3-lxml python3-tables python3-olefile lmodern dvisvgm
  tex-gyre tipa texlive-plain-generic ruby | ruby-interpreter tk
  libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
  x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bison ca-certificates clang-11
  cmake cmake-data debhelper dh-autoreconf dh-python dh-strip-nondeterminism
  docutils-common doxygen dwz file flex fontconfig fontconfig-config
  fonts-dejavu-core fonts-lmodern gettext gettext-base groff-base
  hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libaom0 libapache-pom-java
  libarchive-zip-perl libarchive13 libblas3 libboost-atomic1.71-dev
  libboost-atomic1.71.0 libboost-chrono1.71-dev libboost-chrono1.71.0
  libboost-date-time1.71-dev libboost-date-time1.71.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.71-dev libboost-python-dev
  libboost-python1.71-dev libboost-python1.71.0 libboost-regex-dev
  libboost-regex1.71-dev libboost-regex1.71.0 libboost-serialization1.71-dev
  libboost-serialization1.71.0 libboost-system-dev libboost-system1.71-dev
  libboost-system1.71.0 libboost-thread-dev libboost-thread1.71-dev
  libboost-thread1.71.0 libboost1.71-dev libbrotli1 libbsd0 libcairo-gobject2
  libcairo2 libclang-common-11-dev libclang-cpp11 libclang1-11
  libcmark-gfm-extensions0 libcmark-gfm0 libcommons-logging-java
  libcommons-parent-java libcoordgen-dev libcoordgen1 libcroco3 libcurl4
  libdatrie1 libdav1d4 libde265-0 libdebhelper-perl libedit2 libelf1 libexpat1
  libexpat1-dev libffi-dev libfftw3-double3 libfile-stripnondeterminism-perl
  libfontbox-java libfontconfig1 libfreetype6 libfribidi0 libgc1
  libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
  libgraphite2-3 libharfbuzz0b libheif1 libice6 libicu-dev libicu67
  libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-sphinxdoc
  libjs-underscore libjsoncpp24 libkpathsea6 liblapack3 liblcms2-2 libllvm11
  liblqr-1-0 libltdl7 libmaeparser-dev libmaeparser1 libmagic-mgc libmagic1
  libmagickcore-6.q16-6 libmagickwand-6.q16-6 libncurses-dev libncurses6
  libnghttp2-14 libobjc-10-dev libobjc4 libopenjp2-7 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
  libpdfbox-java libpfm4 libpipeline1 libpixman-1-0 libpng16-16 libpq-dev
  libpq5 libprocps8 libpsl5 libptexenc1 libpython3-dev libpython3-stdlib
  libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib
  librhash0 librsvg2-2 librsvg2-bin librtmp1 libsigsegv2 libsm6 libsqlite3-dev
  libssh2-1 libsub-override-perl libsynctex2 libteckit0 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtool
  libuchardet0 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx265-192 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6
  libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 libyaml-0-2
  libz3-4 libz3-dev libzzip-0-13 llvm-11 llvm-11-dev llvm-11-runtime
  llvm-11-tools m4 mailcap man-db media-types mime-support node-jquery openssl
  pandoc pandoc-data po-debconf postgresql-client-13 postgresql-client-common
  postgresql-common postgresql-server-dev-13 postgresql-server-dev-all
  preview-latex-style procps python-babel-localedata python3 python3-alabaster
  python3-babel python3-certifi python3-chardet python3-commonmark
  python3-dateutil python3-dev python3-distutils python3-docutils python3-idna
  python3-imagesize python3-jinja2 python3-lib2to3 python3-markupsafe
  python3-minimal python3-numpy python3-packaging python3-pandas
  python3-pandas-lib python3-pil python3-pkg-resources python3-pygments
  python3-pyparsing python3-recommonmark python3-requests python3-roman
  python3-six python3-snowballstemmer python3-sphinx python3-tz
  python3-urllib3 python3-yaml python3.9 python3.9-dev python3.9-minimal
  rapidjson-dev sbuild-build-depends-rdkit-dummy sgml-base shared-mime-info
  sphinx-common ssl-cert t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils xml-core
  zlib1g-dev
0 upgraded, 269 newly installed, 0 to remove and 0 not upgraded.
Need to get 279 MB of archives.
After this operation, 1418 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-UuxXRN/apt_archive ./ sbuild-build-depends-rdkit-dummy 0.invalid.0 [1056 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.3-1 [29.9 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.3-2 [1269 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf flex armhf 2.6.4-8 [412 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.10-1 [73.3 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.9-2+b1 [261 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-3 [276 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.2+dfsg-4 [345 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf libaom0 armhf 1.0.0.errata1-3 [793 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf libdav1d4 armhf 0.7.1-3+rpi1 [207 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libde265-0 armhf 1.0.7-1+rpi1 [181 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libx265-192 armhf 3.4-2 [560 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libheif1 armhf 1.9.1-1 [158 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:2.0.5-1.1 [121 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-4 [119 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.66.3-2 [1178 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-14 [388 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.12-1 [311 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.12-1 [700 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libicu67 armhf 67.1-4 [8289 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-6.3 [580 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6-common all 8:6.9.11.24+dfsg-1 [208 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.11.24+dfsg-1+b2 [1631 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.11.24+dfsg-1+b2 [430 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-minimal armhf 3.9.1~rc1-2+rpi1 [789 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf python3.9-minimal armhf 3.9.1~rc1-2+rpi1 [1624 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.9.0-4 [37.8 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf media-types all 1.0.1 [18.2 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf mailcap all 3.67 [31.3 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.66 [10.9 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-stdlib armhf 3.9.1~rc1-2+rpi1 [1653 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf python3.9 armhf 3.9.1~rc1-2+rpi1 [460 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.9.0-4 [21.0 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.9.0-4 [64.1 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf sgml-base all 1.30 [15.1 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.15 [53.5 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2+20201114-1 [79.5 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.39-3 [68.0 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-4 [801 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf bison armhf 2:3.7.4+dfsg-1 [1041 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1h-1 [812 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20200601 [158 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.9-1 [5548 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libllvm11 armhf 1:11.0.0-5+rpi1 [15.6 MB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libclang-cpp11 armhf 1:11.0.0-5+rpi1 [8272 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libgc1 armhf 1:8.0.4-2.1 [227 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libobjc4 armhf 10.2.0-19+rpi1 [33.8 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libobjc-10-dev armhf 10.2.0-19+rpi1 [159 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libclang-common-11-dev armhf 1:11.0.0-5+rpi1 [2831 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libclang1-11 armhf 1:11.0.0-5+rpi1 [4646 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf clang-11 armhf 1:11.0.0-5+rpi1 [104 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.18.4-1+rpi1 [1725 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.3-2 [294 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.42.0-1 [66.7 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1.1 [54.2 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.72.0-1 [300 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp24 armhf 1.9.4-3 [66.9 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.4.0-1 [133 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.40.0-1 [118 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.18.4-1+rpi1+b1 [3111 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.3 [188 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.9.0-1 [25.5 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.9.0-1 [15.2 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.182-1 [162 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.3 [1009 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.6-1 [78.4 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.6-1 [145 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20201102 [99.3 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-3 [129 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf doxygen armhf 1.8.20-5 [3430 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 67.1-4 [172 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6.q16 armhf 8:6.9.11.24+dfsg-1+b2 [380 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf imagemagick armhf 8:6.9.11.24+dfsg-1+b2 [163 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2020.20200327.54578-5 [163 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2020.20200327.54578-5 [61.1 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2020.20200327.54578-5 [70.0 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2020.20200327.54578-5 [101 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2020.20200327.54578-5 [208 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-4 [52.3 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.40.0-1 [463 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.7-1 [1366 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.10+ds1-3 [252 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+21 [252 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.2.0-1 [159 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.10-1 [77.9 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2020.20200327.54578-5 [6903 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2020.20200925-1 [21.5 MB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2020.20200925-1 [1071 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf latexmk all 1:4.70b-0.1 [393 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libapache-pom-java all 18-1 [4676 B]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-3 [108 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libboost1.71-dev armhf 1.71.0-7+b1 [9098 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libboost-atomic1.71.0 armhf 1.71.0-7+b1 [234 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libboost-atomic1.71-dev armhf 1.71.0-7+b1 [234 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libboost-chrono1.71.0 armhf 1.71.0-7+b1 [241 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libboost-chrono1.71-dev armhf 1.71.0-7+b1 [249 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.71.0 armhf 1.71.0-7+b1 [243 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.71.0 armhf 1.71.0-7+b1 [310 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.71-dev armhf 1.71.0-7+b1 [379 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.71-dev armhf 1.71.0-7+b1 [258 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.71.0.3+b8 [4624 B]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.71.0 armhf 1.71.0-7+b1 [441 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 67.1-4 [9248 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.71-dev armhf 1.71.0-7+b1 [567 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.71-dev armhf 1.71.0-7+b1 [272 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams-dev armhf 1.71.0.3+b8 [4392 B]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.71.0 armhf 1.71.0-7+b1 [303 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9 armhf 3.9.1~rc1-2+rpi1 [1412 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.10-1 [121 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf libpython3.9-dev armhf 3.9.1~rc1-2+rpi1 [3057 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.9.0-4 [21.2 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf python3.9-dev armhf 3.9.1~rc1-2+rpi1 [501 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.9.0-4 [1164 B]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.71-dev armhf 1.71.0-7+b1 [318 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libboost-python-dev armhf 1.71.0.3+b8 [4704 B]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex-dev armhf 1.71.0.3+b8 [4668 B]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.71.0 armhf 1.71.0-7+b1 [233 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.71-dev armhf 1.71.0-7+b1 [234 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf libboost-system-dev armhf 1.71.0.3+b8 [4544 B]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread1.71.0 armhf 1.71.0-7+b1 [264 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread1.71-dev armhf 1.71.0-7+b1 [280 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread-dev armhf 1.71.0.3+b8 [4436 B]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libcairo-gobject2 armhf 1.16.0-4 [123 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libcmark-gfm0 armhf 0.29.0.gfm.0-6 [104 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libcmark-gfm-extensions0 armhf 0.29.0.gfm.0-6 [43.8 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libcommons-logging-java all 1.2-2 [62.2 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf libcoordgen1 armhf 1.4.2-1 [164 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libcoordgen-dev armhf 1.4.2-1 [45.2 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b5 [36.5 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf libffi-dev armhf 3.3-5 [58.2 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-common all 2.40.0+dfsg-8 [318 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf shared-mime-info armhf 2.0-1 [697 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf-2.0-0 armhf 2.40.0+dfsg-8 [128 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.2.0-19+rpi1 [231 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf libimagequant0 armhf 2.12.2-1.1 [27.2 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf node-jquery all 3.5.1+dfsg+~3.5.4-3 [396 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.4-3 [3996 B]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 3.3.1-1 [124 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-3 [1597 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser1 armhf 1.2.4-1 [76.1 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser-dev armhf 1.2.4-1 [13.1 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2+20201114-1 [288 kB]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.46.2-3 [172 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [55.7 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.7 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf libpfm4 armhf 4.11.1+git4-gfa84c27-1 [42.7 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf libpq5 armhf 13.1-1+b1 [158 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf libpq-dev armhf 13.1-1+b1 [124 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-2 armhf 2.50.2+dfsg-1 [2065 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-bin armhf 2.50.2+dfsg-1 [35.3 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.34.0-1 [852 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libtinfo-dev armhf 6.2+20201114-1 [932 B]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libyaml-0-2 armhf 0.2.2-1 [40.0 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf libz3-dev armhf 4.8.9-1 [90.8 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf llvm-11-runtime armhf 1:11.0.0-5+rpi1 [186 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf llvm-11 armhf 1:11.0.0-5+rpi1 [6979 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 50.3.0-1 [187 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.7.1+dfsg-1 [656 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf python3-yaml armhf 5.3.1-3+b1 [126 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf llvm-11-tools armhf 1:11.0.0-5+rpi1 [334 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf llvm-11-dev armhf 1:11.0.0-5+rpi1 [27.7 MB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf pandoc-data all 2.9.2.1-1 [376 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf pandoc armhf 2.9.2.1-1 [18.7 MB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf postgresql-client-common all 223 [88.8 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf postgresql-client-13 armhf 13.1-1+b1 [1384 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf ssl-cert all 1.0.40 [20.0 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf postgresql-common all 223 [237 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf postgresql-server-dev-13 armhf 13.1-1+b1 [968 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf postgresql-server-dev-all all 223 [74.8 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 12.2-1 [201 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-4 [4996 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2020.4-2 [34.8 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-4 [99.9 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2020.6.20-1 [151 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-7 [81.1 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf python3-commonmark all 0.9.1-3 [44.9 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.15.0-2 [16.9 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.8.1-4 [81.6 kB]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-5 [9064 B]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-3 [384 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.10-1 [37.4 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1+b1 [14.8 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.11.2-1 [113 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.19.4-1+b2 [2930 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.7-1 [109 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.4-1 [30.4 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 1.1.4+dfsg-1+rpi1 [2864 kB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 1.1.4+dfsg-1+rpi1 [2092 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf python3-pil armhf 8.0.1-1+b1 [423 kB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 3.3.1-1 [575 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.11-1 [107 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.24.0+dfsg-1 [71.7 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf python3-snowballstemmer all 2.0.0-2 [58.2 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 3.3.1-1 [537 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf python3-recommonmark all 0.6.0+ds-1 [17.2 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-6 [98.7 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2020.20200925-1 [5002 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2020.20200925-1 [14.5 MB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2020.20200925-1 [4688 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2020.20201129-1 [13.6 MB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 279 MB in 24s (11.4 MB/s)
Selecting previously unselected package libuchardet0:armhf.
(Reading database ... 12776 files and directories currently installed.)
Preparing to unpack .../00-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../01-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../02-libpipeline1_1.5.3-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../03-man-db_2.9.3-2_armhf.deb ...
Unpacking man-db (2.9.3-2) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../04-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../05-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package flex.
Preparing to unpack .../06-flex_2.6.4-8_armhf.deb ...
Unpacking flex (2.6.4-8) ...
Selecting previously unselected package libfftw3-double3:armhf.
Preparing to unpack .../07-libfftw3-double3_3.3.8-2_armhf.deb ...
Unpacking libfftw3-double3:armhf (3.3.8-2) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../08-libexpat1_2.2.10-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.10-1) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../09-libbrotli1_1.0.9-2+b1_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.9-2+b1) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../10-libpng16-16_1.6.37-3_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-3) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../11-libfreetype6_2.10.2+dfsg-4_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.2+dfsg-4) ...
Selecting previously unselected package ucf.
Preparing to unpack .../12-ucf_3.0043_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0043) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../13-fonts-dejavu-core_2.37-2_all.deb ...
Unpacking fonts-dejavu-core (2.37-2) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../14-fontconfig-config_2.13.1-4.2_all.deb ...
Unpacking fontconfig-config (2.13.1-4.2) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../15-libfontconfig1_2.13.1-4.2_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.1-4.2) ...
Selecting previously unselected package libaom0:armhf.
Preparing to unpack .../16-libaom0_1.0.0.errata1-3_armhf.deb ...
Unpacking libaom0:armhf (1.0.0.errata1-3) ...
Selecting previously unselected package libdav1d4:armhf.
Preparing to unpack .../17-libdav1d4_0.7.1-3+rpi1_armhf.deb ...
Unpacking libdav1d4:armhf (0.7.1-3+rpi1) ...
Selecting previously unselected package libde265-0:armhf.
Preparing to unpack .../18-libde265-0_1.0.7-1+rpi1_armhf.deb ...
Unpacking libde265-0:armhf (1.0.7-1+rpi1) ...
Selecting previously unselected package libx265-192:armhf.
Preparing to unpack .../19-libx265-192_3.4-2_armhf.deb ...
Unpacking libx265-192:armhf (3.4-2) ...
Selecting previously unselected package libheif1:armhf.
Preparing to unpack .../20-libheif1_1.9.1-1_armhf.deb ...
Unpacking libheif1:armhf (1.9.1-1) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../21-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../22-libjpeg62-turbo_1%3a2.0.5-1.1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:2.0.5-1.1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../23-liblcms2-2_2.9-4_armhf.deb ...
Unpacking liblcms2-2:armhf (2.9-4) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../24-libglib2.0-0_2.66.3-2_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.66.3-2) ...
Selecting previously unselected package liblqr-1-0:armhf.
Preparing to unpack .../25-liblqr-1-0_0.4.2-2.1_armhf.deb ...
Unpacking liblqr-1-0:armhf (0.4.2-2.1) ...
Selecting previously unselected package libltdl7:armhf.
Preparing to unpack .../26-libltdl7_2.4.6-14_armhf.deb ...
Unpacking libltdl7:armhf (2.4.6-14) ...
Selecting previously unselected package libopenjp2-7:armhf.
Preparing to unpack .../27-libopenjp2-7_2.3.1-1_armhf.deb ...
Unpacking libopenjp2-7:armhf (2.3.1-1) ...
Selecting previously unselected package libwebp6:armhf.
Preparing to unpack .../28-libwebp6_0.6.1-2_armhf.deb ...
Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../29-libtiff5_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libwebpdemux2:armhf.
Preparing to unpack .../30-libwebpdemux2_0.6.1-2_armhf.deb ...
Unpacking libwebpdemux2:armhf (0.6.1-2) ...
Selecting previously unselected package libwebpmux3:armhf.
Preparing to unpack .../31-libwebpmux3_0.6.1-2_armhf.deb ...
Unpacking libwebpmux3:armhf (0.6.1-2) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../32-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libbsd0:armhf.
Preparing to unpack .../33-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../34-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../35-libxcb1_1.14-2_armhf.deb ...
Unpacking libxcb1:armhf (1.14-2) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../36-libx11-data_2%3a1.6.12-1_all.deb ...
Unpacking libx11-data (2:1.6.12-1) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../37-libx11-6_2%3a1.6.12-1_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.12-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../38-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libicu67:armhf.
Preparing to unpack .../39-libicu67_67.1-4_armhf.deb ...
Unpacking libicu67:armhf (67.1-4) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../40-libxml2_2.9.10+dfsg-6.3_armhf.deb ...
Unpacking libxml2:armhf (2.9.10+dfsg-6.3) ...
Selecting previously unselected package imagemagick-6-common.
Preparing to unpack .../41-imagemagick-6-common_8%3a6.9.11.24+dfsg-1_all.deb ...
Unpacking imagemagick-6-common (8:6.9.11.24+dfsg-1) ...
Selecting previously unselected package libmagickcore-6.q16-6:armhf.
Preparing to unpack .../42-libmagickcore-6.q16-6_8%3a6.9.11.24+dfsg-1+b2_armhf.deb ...
Unpacking libmagickcore-6.q16-6:armhf (8:6.9.11.24+dfsg-1+b2) ...
Selecting previously unselected package libmagickwand-6.q16-6:armhf.
Preparing to unpack .../43-libmagickwand-6.q16-6_8%3a6.9.11.24+dfsg-1+b2_armhf.deb ...
Unpacking libmagickwand-6.q16-6:armhf (8:6.9.11.24+dfsg-1+b2) ...
Selecting previously unselected package libpython3.9-minimal:armhf.
Preparing to unpack .../44-libpython3.9-minimal_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-minimal:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3.9-minimal.
Preparing to unpack .../45-python3.9-minimal_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking python3.9-minimal (3.9.1~rc1-2+rpi1) ...
Setting up libpython3.9-minimal:armhf (3.9.1~rc1-2+rpi1) ...
Setting up libexpat1:armhf (2.2.10-1) ...
Setting up python3.9-minimal (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 14708 files and directories currently installed.)
Preparing to unpack .../0-python3-minimal_3.9.0-4_armhf.deb ...
Unpacking python3-minimal (3.9.0-4) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_1.0.1_all.deb ...
Unpacking media-types (1.0.1) ...
Selecting previously unselected package mailcap.
Preparing to unpack .../2-mailcap_3.67_all.deb ...
Unpacking mailcap (3.67) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../3-mime-support_3.66_all.deb ...
Unpacking mime-support (3.66) ...
Selecting previously unselected package libpython3.9-stdlib:armhf.
Preparing to unpack .../4-libpython3.9-stdlib_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-stdlib:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3.9.
Preparing to unpack .../5-python3.9_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking python3.9 (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../6-libpython3-stdlib_3.9.0-4_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.9.0-4) ...
Setting up python3-minimal (3.9.0-4) ...
Selecting previously unselected package python3.
(Reading database ... 15121 files and directories currently installed.)
Preparing to unpack .../000-python3_3.9.0-4_armhf.deb ...
Unpacking python3 (3.9.0-4) ...
Selecting previously unselected package sgml-base.
Preparing to unpack .../001-sgml-base_1.30_all.deb ...
Unpacking sgml-base (1.30) ...
Selecting previously unselected package tex-common.
Preparing to unpack .../002-tex-common_6.15_all.deb ...
Unpacking tex-common (6.15) ...
Selecting previously unselected package libncurses6:armhf.
Preparing to unpack .../003-libncurses6_6.2+20201114-1_armhf.deb ...
Unpacking libncurses6:armhf (6.2+20201114-1) ...
Selecting previously unselected package libprocps8:armhf.
Preparing to unpack .../004-libprocps8_2%3a3.3.16-5_armhf.deb ...
Unpacking libprocps8:armhf (2:3.3.16-5) ...
Selecting previously unselected package procps.
Preparing to unpack .../005-procps_2%3a3.3.16-5_armhf.deb ...
Unpacking procps (2:3.3.16-5) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../006-libmagic-mgc_1%3a5.39-3_armhf.deb ...
Unpacking libmagic-mgc (1:5.39-3) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../007-libmagic1_1%3a5.39-3_armhf.deb ...
Unpacking libmagic1:armhf (1:5.39-3) ...
Selecting previously unselected package file.
Preparing to unpack .../008-file_1%3a5.39-3_armhf.deb ...
Unpacking file (1:5.39-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../009-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../010-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../011-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../012-automake_1%3a1.16.2-4_all.deb ...
Unpacking automake (1:1.16.2-4) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../013-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package bison.
Preparing to unpack .../014-bison_2%3a3.7.4+dfsg-1_armhf.deb ...
Unpacking bison (2:3.7.4+dfsg-1) ...
Selecting previously unselected package openssl.
Preparing to unpack .../015-openssl_1.1.1h-1_armhf.deb ...
Unpacking openssl (1.1.1h-1) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../016-ca-certificates_20200601_all.deb ...
Unpacking ca-certificates (20200601) ...
Selecting previously unselected package libedit2:armhf.
Preparing to unpack .../017-libedit2_3.1-20191231-1_armhf.deb ...
Unpacking libedit2:armhf (3.1-20191231-1) ...
Selecting previously unselected package libz3-4:armhf.
Preparing to unpack .../018-libz3-4_4.8.9-1_armhf.deb ...
Unpacking libz3-4:armhf (4.8.9-1) ...
Selecting previously unselected package libllvm11:armhf.
Preparing to unpack .../019-libllvm11_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking libllvm11:armhf (1:11.0.0-5+rpi1) ...
Selecting previously unselected package libclang-cpp11.
Preparing to unpack .../020-libclang-cpp11_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking libclang-cpp11 (1:11.0.0-5+rpi1) ...
Selecting previously unselected package libgc1:armhf.
Preparing to unpack .../021-libgc1_1%3a8.0.4-2.1_armhf.deb ...
Unpacking libgc1:armhf (1:8.0.4-2.1) ...
Selecting previously unselected package libobjc4:armhf.
Preparing to unpack .../022-libobjc4_10.2.0-19+rpi1_armhf.deb ...
Unpacking libobjc4:armhf (10.2.0-19+rpi1) ...
Selecting previously unselected package libobjc-10-dev:armhf.
Preparing to unpack .../023-libobjc-10-dev_10.2.0-19+rpi1_armhf.deb ...
Unpacking libobjc-10-dev:armhf (10.2.0-19+rpi1) ...
Selecting previously unselected package libclang-common-11-dev.
Preparing to unpack .../024-libclang-common-11-dev_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking libclang-common-11-dev (1:11.0.0-5+rpi1) ...
Selecting previously unselected package libclang1-11.
Preparing to unpack .../025-libclang1-11_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking libclang1-11 (1:11.0.0-5+rpi1) ...
Selecting previously unselected package clang-11.
Preparing to unpack .../026-clang-11_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking clang-11 (1:11.0.0-5+rpi1) ...
Selecting previously unselected package cmake-data.
Preparing to unpack .../027-cmake-data_3.18.4-1+rpi1_all.deb ...
Unpacking cmake-data (3.18.4-1+rpi1) ...
Selecting previously unselected package libarchive13:armhf.
Preparing to unpack .../028-libarchive13_3.4.3-2_armhf.deb ...
Unpacking libarchive13:armhf (3.4.3-2) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../029-libnghttp2-14_1.42.0-1_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.42.0-1) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../030-libpsl5_0.21.0-1.1_armhf.deb ...
Unpacking libpsl5:armhf (0.21.0-1.1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../031-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../032-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl4:armhf.
Preparing to unpack .../033-libcurl4_7.72.0-1_armhf.deb ...
Unpacking libcurl4:armhf (7.72.0-1) ...
Selecting previously unselected package libjsoncpp24:armhf.
Preparing to unpack .../034-libjsoncpp24_1.9.4-3_armhf.deb ...
Unpacking libjsoncpp24:armhf (1.9.4-3) ...
Selecting previously unselected package librhash0:armhf.
Preparing to unpack .../035-librhash0_1.4.0-1_armhf.deb ...
Unpacking librhash0:armhf (1.4.0-1) ...
Selecting previously unselected package libuv1:armhf.
Preparing to unpack .../036-libuv1_1.40.0-1_armhf.deb ...
Unpacking libuv1:armhf (1.40.0-1) ...
Selecting previously unselected package cmake.
Preparing to unpack .../037-cmake_3.18.4-1+rpi1+b1_armhf.deb ...
Unpacking cmake (3.18.4-1+rpi1+b1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../038-libtool_2.4.6-14_all.deb ...
Unpacking libtool (2.4.6-14) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../039-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../040-libdebhelper-perl_13.3_all.deb ...
Unpacking libdebhelper-perl (13.3) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../041-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../042-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../043-libfile-stripnondeterminism-perl_1.9.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.9.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../044-dh-strip-nondeterminism_1.9.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.9.0-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../045-libelf1_0.182-1_armhf.deb ...
Unpacking libelf1:armhf (0.182-1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../046-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../047-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../048-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../049-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../050-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../051-debhelper_13.3_all.deb ...
Unpacking debhelper (13.3) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../052-python3-lib2to3_3.8.6-1_all.deb ...
Unpacking python3-lib2to3 (3.8.6-1) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../053-python3-distutils_3.8.6-1_all.deb ...
Unpacking python3-distutils (3.8.6-1) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../054-dh-python_4.20201102_all.deb ...
Unpacking dh-python (4.20201102) ...
Selecting previously unselected package xml-core.
Preparing to unpack .../055-xml-core_0.18+nmu1_all.deb ...
Unpacking xml-core (0.18+nmu1) ...
Selecting previously unselected package docutils-common.
Preparing to unpack .../056-docutils-common_0.16+dfsg-3_all.deb ...
Unpacking docutils-common (0.16+dfsg-3) ...
Selecting previously unselected package doxygen.
Preparing to unpack .../057-doxygen_1.8.20-5_armhf.deb ...
Unpacking doxygen (1.8.20-5) ...
Selecting previously unselected package fontconfig.
Preparing to unpack .../058-fontconfig_2.13.1-4.2_armhf.deb ...
Unpacking fontconfig (2.13.1-4.2) ...
Selecting previously unselected package fonts-lmodern.
Preparing to unpack .../059-fonts-lmodern_2.004.5-6_all.deb ...
Unpacking fonts-lmodern (2.004.5-6) ...
Selecting previously unselected package hicolor-icon-theme.
Preparing to unpack .../060-hicolor-icon-theme_0.17-2_all.deb ...
Unpacking hicolor-icon-theme (0.17-2) ...
Selecting previously unselected package icu-devtools.
Preparing to unpack .../061-icu-devtools_67.1-4_armhf.deb ...
Unpacking icu-devtools (67.1-4) ...
Selecting previously unselected package imagemagick-6.q16.
Preparing to unpack .../062-imagemagick-6.q16_8%3a6.9.11.24+dfsg-1+b2_armhf.deb ...
Unpacking imagemagick-6.q16 (8:6.9.11.24+dfsg-1+b2) ...
Selecting previously unselected package imagemagick.
Preparing to unpack .../063-imagemagick_8%3a6.9.11.24+dfsg-1+b2_armhf.deb ...
Unpacking imagemagick (8:6.9.11.24+dfsg-1+b2) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../064-libpaper1_1.1.28_armhf.deb ...
Unpacking libpaper1:armhf (1.1.28) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../065-libpaper-utils_1.1.28_armhf.deb ...
Unpacking libpaper-utils (1.1.28) ...
Selecting previously unselected package libkpathsea6:armhf.
Preparing to unpack .../066-libkpathsea6_2020.20200327.54578-5_armhf.deb ...
Unpacking libkpathsea6:armhf (2020.20200327.54578-5) ...
Selecting previously unselected package libptexenc1:armhf.
Preparing to unpack .../067-libptexenc1_2020.20200327.54578-5_armhf.deb ...
Unpacking libptexenc1:armhf (2020.20200327.54578-5) ...
Selecting previously unselected package libsynctex2:armhf.
Preparing to unpack .../068-libsynctex2_2020.20200327.54578-5_armhf.deb ...
Unpacking libsynctex2:armhf (2020.20200327.54578-5) ...
Selecting previously unselected package libtexlua53:armhf.
Preparing to unpack .../069-libtexlua53_2020.20200327.54578-5_armhf.deb ...
Unpacking libtexlua53:armhf (2020.20200327.54578-5) ...
Selecting previously unselected package libtexluajit2:armhf.
Preparing to unpack .../070-libtexluajit2_2020.20200327.54578-5_armhf.deb ...
Unpacking libtexluajit2:armhf (2020.20200327.54578-5) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../071-t1utils_1.41-4_armhf.deb ...
Unpacking t1utils (1.41-4) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../072-libpixman-1-0_0.40.0-1_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.40.0-1) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../073-libxcb-render0_1.14-2_armhf.deb ...
Unpacking libxcb-render0:armhf (1.14-2) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../074-libxcb-shm0_1.14-2_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.14-2) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../075-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../076-libcairo2_1.16.0-4_armhf.deb ...
Unpacking libcairo2:armhf (1.16.0-4) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../077-libgraphite2-3_1.3.14-1_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.14-1) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../078-libharfbuzz0b_2.6.7-1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (2.6.7-1) ...
Selecting previously unselected package libteckit0:armhf.
Preparing to unpack .../079-libteckit0_2.5.10+ds1-3_armhf.deb ...
Unpacking libteckit0:armhf (2.5.10+ds1-3) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../080-x11-common_1%3a7.7+21_all.deb ...
Unpacking x11-common (1:7.7+21) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../081-libice6_2%3a1.0.10-1_armhf.deb ...
Unpacking libice6:armhf (2:1.0.10-1) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../082-libsm6_2%3a1.2.3-1_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.3-1) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../083-libxt6_1%3a1.2.0-1_armhf.deb ...
Unpacking libxt6:armhf (1:1.2.0-1) ...
Selecting previously unselected package libxmu6:armhf.
Preparing to unpack .../084-libxmu6_2%3a1.1.2-2+b3_armhf.deb ...
Unpacking libxmu6:armhf (2:1.1.2-2+b3) ...
Selecting previously unselected package libxpm4:armhf.
Preparing to unpack .../085-libxpm4_1%3a3.5.12-1_armhf.deb ...
Unpacking libxpm4:armhf (1:3.5.12-1) ...
Selecting previously unselected package libxaw7:armhf.
Preparing to unpack .../086-libxaw7_2%3a1.0.13-1+b2_armhf.deb ...
Unpacking libxaw7:armhf (2:1.0.13-1+b2) ...
Selecting previously unselected package libxi6:armhf.
Preparing to unpack .../087-libxi6_2%3a1.7.10-1_armhf.deb ...
Unpacking libxi6:armhf (2:1.7.10-1) ...
Selecting previously unselected package libzzip-0-13:armhf.
Preparing to unpack .../088-libzzip-0-13_0.13.62-3.2_armhf.deb ...
Unpacking libzzip-0-13:armhf (0.13.62-3.2) ...
Selecting previously unselected package texlive-binaries.
Preparing to unpack .../089-texlive-binaries_2020.20200327.54578-5_armhf.deb ...
Unpacking texlive-binaries (2020.20200327.54578-5) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../090-xdg-utils_1.1.3-2_all.deb ...
Unpacking xdg-utils (1.1.3-2) ...
Selecting previously unselected package texlive-base.
Preparing to unpack .../091-texlive-base_2020.20200925-1_all.deb ...
Unpacking texlive-base (2020.20200925-1) ...
Selecting previously unselected package texlive-latex-base.
Preparing to unpack .../092-texlive-latex-base_2020.20200925-1_all.deb ...
Unpacking texlive-latex-base (2020.20200925-1) ...
Selecting previously unselected package latexmk.
Preparing to unpack .../093-latexmk_1%3a4.70b-0.1_all.deb ...
Unpacking latexmk (1:4.70b-0.1) ...
Selecting previously unselected package libapache-pom-java.
Preparing to unpack .../094-libapache-pom-java_18-1_all.deb ...
Unpacking libapache-pom-java (18-1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../095-libblas3_3.9.0-3_armhf.deb ...
Unpacking libblas3:armhf (3.9.0-3) ...
Selecting previously unselected package libboost1.71-dev:armhf.
Preparing to unpack .../096-libboost1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-atomic1.71.0:armhf.
Preparing to unpack .../097-libboost-atomic1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-atomic1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-atomic1.71-dev:armhf.
Preparing to unpack .../098-libboost-atomic1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-atomic1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-chrono1.71.0:armhf.
Preparing to unpack .../099-libboost-chrono1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-chrono1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-chrono1.71-dev:armhf.
Preparing to unpack .../100-libboost-chrono1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-chrono1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-date-time1.71.0:armhf.
Preparing to unpack .../101-libboost-date-time1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-date-time1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-serialization1.71.0:armhf.
Preparing to unpack .../102-libboost-serialization1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-serialization1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-serialization1.71-dev:armhf.
Preparing to unpack .../103-libboost-serialization1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-serialization1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-date-time1.71-dev:armhf.
Preparing to unpack .../104-libboost-date-time1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-date-time1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-dev:armhf.
Preparing to unpack .../105-libboost-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-dev:armhf (1.71.0.3+b8) ...
Selecting previously unselected package libboost-regex1.71.0:armhf.
Preparing to unpack .../106-libboost-regex1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-regex1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libicu-dev:armhf.
Preparing to unpack .../107-libicu-dev_67.1-4_armhf.deb ...
Unpacking libicu-dev:armhf (67.1-4) ...
Selecting previously unselected package libboost-regex1.71-dev:armhf.
Preparing to unpack .../108-libboost-regex1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-regex1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-iostreams1.71-dev:armhf.
Preparing to unpack .../109-libboost-iostreams1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-iostreams1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-iostreams-dev:armhf.
Preparing to unpack .../110-libboost-iostreams-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-iostreams-dev:armhf (1.71.0.3+b8) ...
Selecting previously unselected package libboost-python1.71.0.
Preparing to unpack .../111-libboost-python1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-python1.71.0 (1.71.0-7+b1) ...
Selecting previously unselected package libpython3.9:armhf.
Preparing to unpack .../112-libpython3.9_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../113-libexpat1-dev_2.2.10-1_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.2.10-1) ...
Selecting previously unselected package libpython3.9-dev:armhf.
Preparing to unpack .../114-libpython3.9-dev_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking libpython3.9-dev:armhf (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../115-libpython3-dev_3.9.0-4_armhf.deb ...
Unpacking libpython3-dev:armhf (3.9.0-4) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../116-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Selecting previously unselected package python3.9-dev.
Preparing to unpack .../117-python3.9-dev_3.9.1~rc1-2+rpi1_armhf.deb ...
Unpacking python3.9-dev (3.9.1~rc1-2+rpi1) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../118-python3-dev_3.9.0-4_armhf.deb ...
Unpacking python3-dev (3.9.0-4) ...
Selecting previously unselected package libboost-python1.71-dev.
Preparing to unpack .../119-libboost-python1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-python1.71-dev (1.71.0-7+b1) ...
Selecting previously unselected package libboost-python-dev.
Preparing to unpack .../120-libboost-python-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-python-dev (1.71.0.3+b8) ...
Selecting previously unselected package libboost-regex-dev:armhf.
Preparing to unpack .../121-libboost-regex-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-regex-dev:armhf (1.71.0.3+b8) ...
Selecting previously unselected package libboost-system1.71.0:armhf.
Preparing to unpack .../122-libboost-system1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-system1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-system1.71-dev:armhf.
Preparing to unpack .../123-libboost-system1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-system1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-system-dev:armhf.
Preparing to unpack .../124-libboost-system-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-system-dev:armhf (1.71.0.3+b8) ...
Selecting previously unselected package libboost-thread1.71.0:armhf.
Preparing to unpack .../125-libboost-thread1.71.0_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-thread1.71.0:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-thread1.71-dev:armhf.
Preparing to unpack .../126-libboost-thread1.71-dev_1.71.0-7+b1_armhf.deb ...
Unpacking libboost-thread1.71-dev:armhf (1.71.0-7+b1) ...
Selecting previously unselected package libboost-thread-dev:armhf.
Preparing to unpack .../127-libboost-thread-dev_1.71.0.3+b8_armhf.deb ...
Unpacking libboost-thread-dev:armhf (1.71.0.3+b8) ...
Selecting previously unselected package libcairo-gobject2:armhf.
Preparing to unpack .../128-libcairo-gobject2_1.16.0-4_armhf.deb ...
Unpacking libcairo-gobject2:armhf (1.16.0-4) ...
Selecting previously unselected package libcmark-gfm0:armhf.
Preparing to unpack .../129-libcmark-gfm0_0.29.0.gfm.0-6_armhf.deb ...
Unpacking libcmark-gfm0:armhf (0.29.0.gfm.0-6) ...
Selecting previously unselected package libcmark-gfm-extensions0:armhf.
Preparing to unpack .../130-libcmark-gfm-extensions0_0.29.0.gfm.0-6_armhf.deb ...
Unpacking libcmark-gfm-extensions0:armhf (0.29.0.gfm.0-6) ...
Selecting previously unselected package libcommons-parent-java.
Preparing to unpack .../131-libcommons-parent-java_43-1_all.deb ...
Unpacking libcommons-parent-java (43-1) ...
Selecting previously unselected package libcommons-logging-java.
Preparing to unpack .../132-libcommons-logging-java_1.2-2_all.deb ...
Unpacking libcommons-logging-java (1.2-2) ...
Selecting previously unselected package libcoordgen1:armhf.
Preparing to unpack .../133-libcoordgen1_1.4.2-1_armhf.deb ...
Unpacking libcoordgen1:armhf (1.4.2-1) ...
Selecting previously unselected package libcoordgen-dev:armhf.
Preparing to unpack .../134-libcoordgen-dev_1.4.2-1_armhf.deb ...
Unpacking libcoordgen-dev:armhf (1.4.2-1) ...
Selecting previously unselected package libdatrie1:armhf.
Preparing to unpack .../135-libdatrie1_0.2.12-3+b5_armhf.deb ...
Unpacking libdatrie1:armhf (0.2.12-3+b5) ...
Selecting previously unselected package libffi-dev:armhf.
Preparing to unpack .../136-libffi-dev_3.3-5_armhf.deb ...
Unpacking libffi-dev:armhf (3.3-5) ...
Selecting previously unselected package libfontbox-java.
Preparing to unpack .../137-libfontbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libfontbox-java (1:1.8.16-2) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../138-libfribidi0_1.0.8-2_armhf.deb ...
Unpacking libfribidi0:armhf (1.0.8-2) ...
Selecting previously unselected package libgdk-pixbuf2.0-common.
Preparing to unpack .../139-libgdk-pixbuf2.0-common_2.40.0+dfsg-8_all.deb ...
Unpacking libgdk-pixbuf2.0-common (2.40.0+dfsg-8) ...
Selecting previously unselected package shared-mime-info.
Preparing to unpack .../140-shared-mime-info_2.0-1_armhf.deb ...
Unpacking shared-mime-info (2.0-1) ...
Selecting previously unselected package libgdk-pixbuf-2.0-0:armhf.
Preparing to unpack .../141-libgdk-pixbuf-2.0-0_2.40.0+dfsg-8_armhf.deb ...
Unpacking libgdk-pixbuf-2.0-0:armhf (2.40.0+dfsg-8) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../142-libgfortran5_10.2.0-19+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (10.2.0-19+rpi1) ...
Selecting previously unselected package libimagequant0:armhf.
Preparing to unpack .../143-libimagequant0_2.12.2-1.1_armhf.deb ...
Unpacking libimagequant0:armhf (2.12.2-1.1) ...
Selecting previously unselected package node-jquery.
Preparing to unpack .../144-node-jquery_3.5.1+dfsg+~3.5.4-3_all.deb ...
Unpacking node-jquery (3.5.1+dfsg+~3.5.4-3) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../145-libjs-jquery_3.5.1+dfsg+~3.5.4-3_all.deb ...
Unpacking libjs-jquery (3.5.1+dfsg+~3.5.4-3) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../146-libjs-underscore_1.9.1~dfsg-1_all.deb ...
Unpacking libjs-underscore (1.9.1~dfsg-1) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../147-libjs-sphinxdoc_3.3.1-1_all.deb ...
Unpacking libjs-sphinxdoc (3.3.1-1) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../148-liblapack3_3.9.0-3_armhf.deb ...
Unpacking liblapack3:armhf (3.9.0-3) ...
Selecting previously unselected package libmaeparser1:armhf.
Preparing to unpack .../149-libmaeparser1_1.2.4-1_armhf.deb ...
Unpacking libmaeparser1:armhf (1.2.4-1) ...
Selecting previously unselected package libmaeparser-dev:armhf.
Preparing to unpack .../150-libmaeparser-dev_1.2.4-1_armhf.deb ...
Unpacking libmaeparser-dev:armhf (1.2.4-1) ...
Selecting previously unselected package libncurses-dev:armhf.
Preparing to unpack .../151-libncurses-dev_6.2+20201114-1_armhf.deb ...
Unpacking libncurses-dev:armhf (6.2+20201114-1) ...
Selecting previously unselected package libthai-data.
Preparing to unpack .../152-libthai-data_0.1.28-3_all.deb ...
Unpacking libthai-data (0.1.28-3) ...
Selecting previously unselected package libthai0:armhf.
Preparing to unpack .../153-libthai0_0.1.28-3_armhf.deb ...
Unpacking libthai0:armhf (0.1.28-3) ...
Selecting previously unselected package libpango-1.0-0:armhf.
Preparing to unpack .../154-libpango-1.0-0_1.46.2-3_armhf.deb ...
Unpacking libpango-1.0-0:armhf (1.46.2-3) ...
Selecting previously unselected package libpangoft2-1.0-0:armhf.
Preparing to unpack .../155-libpangoft2-1.0-0_1.46.2-3_armhf.deb ...
Unpacking libpangoft2-1.0-0:armhf (1.46.2-3) ...
Selecting previously unselected package libpangocairo-1.0-0:armhf.
Preparing to unpack .../156-libpangocairo-1.0-0_1.46.2-3_armhf.deb ...
Unpacking libpangocairo-1.0-0:armhf (1.46.2-3) ...
Selecting previously unselected package libpdfbox-java.
Preparing to unpack .../157-libpdfbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libpdfbox-java (1:1.8.16-2) ...
Selecting previously unselected package libpfm4:armhf.
Preparing to unpack .../158-libpfm4_4.11.1+git4-gfa84c27-1_armhf.deb ...
Unpacking libpfm4:armhf (4.11.1+git4-gfa84c27-1) ...
Selecting previously unselected package libpq5:armhf.
Preparing to unpack .../159-libpq5_13.1-1+b1_armhf.deb ...
Unpacking libpq5:armhf (13.1-1+b1) ...
Selecting previously unselected package libpq-dev.
Preparing to unpack .../160-libpq-dev_13.1-1+b1_armhf.deb ...
Unpacking libpq-dev (13.1-1+b1) ...
Selecting previously unselected package librsvg2-2:armhf.
Preparing to unpack .../161-librsvg2-2_2.50.2+dfsg-1_armhf.deb ...
Unpacking librsvg2-2:armhf (2.50.2+dfsg-1) ...
Selecting previously unselected package librsvg2-bin.
Preparing to unpack .../162-librsvg2-bin_2.50.2+dfsg-1_armhf.deb ...
Unpacking librsvg2-bin (2.50.2+dfsg-1) ...
Selecting previously unselected package libsqlite3-dev:armhf.
Preparing to unpack .../163-libsqlite3-dev_3.34.0-1_armhf.deb ...
Unpacking libsqlite3-dev:armhf (3.34.0-1) ...
Selecting previously unselected package libtinfo-dev:armhf.
Preparing to unpack .../164-libtinfo-dev_6.2+20201114-1_armhf.deb ...
Unpacking libtinfo-dev:armhf (6.2+20201114-1) ...
Selecting previously unselected package libyaml-0-2:armhf.
Preparing to unpack .../165-libyaml-0-2_0.2.2-1_armhf.deb ...
Unpacking libyaml-0-2:armhf (0.2.2-1) ...
Selecting previously unselected package libz3-dev:armhf.
Preparing to unpack .../166-libz3-dev_4.8.9-1_armhf.deb ...
Unpacking libz3-dev:armhf (4.8.9-1) ...
Selecting previously unselected package llvm-11-runtime.
Preparing to unpack .../167-llvm-11-runtime_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking llvm-11-runtime (1:11.0.0-5+rpi1) ...
Selecting previously unselected package llvm-11.
Preparing to unpack .../168-llvm-11_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking llvm-11 (1:11.0.0-5+rpi1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../169-python3-pkg-resources_50.3.0-1_all.deb ...
Unpacking python3-pkg-resources (50.3.0-1) ...
Selecting previously unselected package python3-pygments.
Preparing to unpack .../170-python3-pygments_2.7.1+dfsg-1_all.deb ...
Unpacking python3-pygments (2.7.1+dfsg-1) ...
Selecting previously unselected package python3-yaml.
Preparing to unpack .../171-python3-yaml_5.3.1-3+b1_armhf.deb ...
Unpacking python3-yaml (5.3.1-3+b1) ...
Selecting previously unselected package llvm-11-tools.
Preparing to unpack .../172-llvm-11-tools_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking llvm-11-tools (1:11.0.0-5+rpi1) ...
Selecting previously unselected package llvm-11-dev.
Preparing to unpack .../173-llvm-11-dev_1%3a11.0.0-5+rpi1_armhf.deb ...
Unpacking llvm-11-dev (1:11.0.0-5+rpi1) ...
Selecting previously unselected package pandoc-data.
Preparing to unpack .../174-pandoc-data_2.9.2.1-1_all.deb ...
Unpacking pandoc-data (2.9.2.1-1) ...
Selecting previously unselected package pandoc.
Preparing to unpack .../175-pandoc_2.9.2.1-1_armhf.deb ...
Unpacking pandoc (2.9.2.1-1) ...
Selecting previously unselected package postgresql-client-common.
Preparing to unpack .../176-postgresql-client-common_223_all.deb ...
Unpacking postgresql-client-common (223) ...
Selecting previously unselected package postgresql-client-13.
Preparing to unpack .../177-postgresql-client-13_13.1-1+b1_armhf.deb ...
Unpacking postgresql-client-13 (13.1-1+b1) ...
Selecting previously unselected package ssl-cert.
Preparing to unpack .../178-ssl-cert_1.0.40_all.deb ...
Unpacking ssl-cert (1.0.40) ...
Selecting previously unselected package postgresql-common.
Preparing to unpack .../179-postgresql-common_223_all.deb ...
Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common'
Unpacking postgresql-common (223) ...
Selecting previously unselected package postgresql-server-dev-13.
Preparing to unpack .../180-postgresql-server-dev-13_13.1-1+b1_armhf.deb ...
Unpacking postgresql-server-dev-13 (13.1-1+b1) ...
Selecting previously unselected package postgresql-server-dev-all.
Preparing to unpack .../181-postgresql-server-dev-all_223_all.deb ...
Unpacking postgresql-server-dev-all (223) ...
Selecting previously unselected package preview-latex-style.
Preparing to unpack .../182-preview-latex-style_12.2-1_all.deb ...
Unpacking preview-latex-style (12.2-1) ...
Selecting previously unselected package python-babel-localedata.
Preparing to unpack .../183-python-babel-localedata_2.8.0+dfsg.1-4_all.deb ...
Unpacking python-babel-localedata (2.8.0+dfsg.1-4) ...
Selecting previously unselected package python3-alabaster.
Preparing to unpack .../184-python3-alabaster_0.7.8-1.1_all.deb ...
Unpacking python3-alabaster (0.7.8-1.1) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../185-python3-tz_2020.4-2_all.deb ...
Unpacking python3-tz (2020.4-2) ...
Selecting previously unselected package python3-babel.
Preparing to unpack .../186-python3-babel_2.8.0+dfsg.1-4_all.deb ...
Unpacking python3-babel (2.8.0+dfsg.1-4) ...
Selecting previously unselected package python3-certifi.
Preparing to unpack .../187-python3-certifi_2020.6.20-1_all.deb ...
Unpacking python3-certifi (2020.6.20-1) ...
Selecting previously unselected package python3-chardet.
Preparing to unpack .../188-python3-chardet_3.0.4-7_all.deb ...
Unpacking python3-chardet (3.0.4-7) ...
Selecting previously unselected package python3-commonmark.
Preparing to unpack .../189-python3-commonmark_0.9.1-3_all.deb ...
Unpacking python3-commonmark (0.9.1-3) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../190-python3-six_1.15.0-2_all.deb ...
Unpacking python3-six (1.15.0-2) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../191-python3-dateutil_2.8.1-4_all.deb ...
Unpacking python3-dateutil (2.8.1-4) ...
Selecting previously unselected package python3-roman.
Preparing to unpack .../192-python3-roman_2.0.0-5_all.deb ...
Unpacking python3-roman (2.0.0-5) ...
Selecting previously unselected package python3-docutils.
Preparing to unpack .../193-python3-docutils_0.16+dfsg-3_all.deb ...
Unpacking python3-docutils (0.16+dfsg-3) ...
Selecting previously unselected package python3-idna.
Preparing to unpack .../194-python3-idna_2.10-1_all.deb ...
Unpacking python3-idna (2.10-1) ...
Selecting previously unselected package python3-imagesize.
Preparing to unpack .../195-python3-imagesize_1.2.0-2_all.deb ...
Unpacking python3-imagesize (1.2.0-2) ...
Selecting previously unselected package python3-markupsafe.
Preparing to unpack .../196-python3-markupsafe_1.1.1-1+b1_armhf.deb ...
Unpacking python3-markupsafe (1.1.1-1+b1) ...
Selecting previously unselected package python3-jinja2.
Preparing to unpack .../197-python3-jinja2_2.11.2-1_all.deb ...
Unpacking python3-jinja2 (2.11.2-1) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../198-python3-numpy_1%3a1.19.4-1+b2_armhf.deb ...
Unpacking python3-numpy (1:1.19.4-1+b2) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../199-python3-pyparsing_2.4.7-1_all.deb ...
Unpacking python3-pyparsing (2.4.7-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../200-python3-packaging_20.4-1_all.deb ...
Unpacking python3-packaging (20.4-1) ...
Selecting previously unselected package python3-pandas-lib:armhf.
Preparing to unpack .../201-python3-pandas-lib_1.1.4+dfsg-1+rpi1_armhf.deb ...
Unpacking python3-pandas-lib:armhf (1.1.4+dfsg-1+rpi1) ...
Selecting previously unselected package python3-pandas.
Preparing to unpack .../202-python3-pandas_1.1.4+dfsg-1+rpi1_all.deb ...
Unpacking python3-pandas (1.1.4+dfsg-1+rpi1) ...
Selecting previously unselected package python3-pil:armhf.
Preparing to unpack .../203-python3-pil_8.0.1-1+b1_armhf.deb ...
Unpacking python3-pil:armhf (8.0.1-1+b1) ...
Selecting previously unselected package sphinx-common.
Preparing to unpack .../204-sphinx-common_3.3.1-1_all.deb ...
Unpacking sphinx-common (3.3.1-1) ...
Selecting previously unselected package python3-urllib3.
Preparing to unpack .../205-python3-urllib3_1.25.11-1_all.deb ...
Unpacking python3-urllib3 (1.25.11-1) ...
Selecting previously unselected package python3-requests.
Preparing to unpack .../206-python3-requests_2.24.0+dfsg-1_all.deb ...
Unpacking python3-requests (2.24.0+dfsg-1) ...
Selecting previously unselected package python3-snowballstemmer.
Preparing to unpack .../207-python3-snowballstemmer_2.0.0-2_all.deb ...
Unpacking python3-snowballstemmer (2.0.0-2) ...
Selecting previously unselected package python3-sphinx.
Preparing to unpack .../208-python3-sphinx_3.3.1-1_all.deb ...
Unpacking python3-sphinx (3.3.1-1) ...
Selecting previously unselected package python3-recommonmark.
Preparing to unpack .../209-python3-recommonmark_0.6.0+ds-1_all.deb ...
Unpacking python3-recommonmark (0.6.0+ds-1) ...
Selecting previously unselected package rapidjson-dev.
Preparing to unpack .../210-rapidjson-dev_1.1.0+dfsg2-6_all.deb ...
Unpacking rapidjson-dev (1.1.0+dfsg2-6) ...
Selecting previously unselected package texlive-fonts-recommended.
Preparing to unpack .../211-texlive-fonts-recommended_2020.20200925-1_all.deb ...
Unpacking texlive-fonts-recommended (2020.20200925-1) ...
Selecting previously unselected package texlive-latex-recommended.
Preparing to unpack .../212-texlive-latex-recommended_2020.20200925-1_all.deb ...
Unpacking texlive-latex-recommended (2020.20200925-1) ...
Selecting previously unselected package texlive-pictures.
Preparing to unpack .../213-texlive-pictures_2020.20200925-1_all.deb ...
Unpacking texlive-pictures (2020.20200925-1) ...
Selecting previously unselected package texlive-latex-extra.
Preparing to unpack .../214-texlive-latex-extra_2020.20201129-1_all.deb ...
Unpacking texlive-latex-extra (2020.20201129-1) ...
Selecting previously unselected package sbuild-build-depends-rdkit-dummy.
Preparing to unpack .../215-sbuild-build-depends-rdkit-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Setting up media-types (1.0.1) ...
Setting up postgresql-client-common (223) ...
Setting up libpipeline1:armhf (1.5.3-1) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up liblcms2-2:armhf (2.9-4) ...
Setting up libpixman-1-0:armhf (0.40.0-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up imagemagick-6-common (8:6.9.11.24+dfsg-1) ...
Setting up libpsl5:armhf (0.21.0-1.1) ...
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libicu67:armhf (67.1-4) ...
Setting up libdatrie1:armhf (0.2.12-3+b5) ...
Setting up libmagic-mgc (1:5.39-3) ...
Setting up libtexlua53:armhf (2020.20200327.54578-5) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libyaml-0-2:armhf (0.2.2-1) ...
Setting up libglib2.0-0:armhf (2.66.3-2) ...
No schema files found: doing nothing.
Setting up libaom0:armhf (1.0.0.errata1-3) ...
Setting up libtexluajit2:armhf (2020.20200327.54578-5) ...
Setting up libdebhelper-perl (13.3) ...
Setting up libbrotli1:armhf (1.0.9-2+b1) ...
Setting up libfontbox-java (1:1.8.16-2) ...
Setting up libboost1.71-dev:armhf (1.71.0-7+b1) ...
Setting up libboost-chrono1.71.0:armhf (1.71.0-7+b1) ...
Setting up libgdk-pixbuf2.0-common (2.40.0+dfsg-8) ...
Setting up x11-common (1:7.7+21) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libnghttp2-14:armhf (1.42.0-1) ...
Setting up libmagic1:armhf (1:5.39-3) ...
Setting up libx265-192:armhf (3.4-2) ...
Setting up libpq5:armhf (13.1-1+b1) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up libpq-dev (13.1-1+b1) ...
Setting up libzzip-0-13:armhf (0.13.62-3.2) ...
Setting up file (1:5.39-3) ...
Setting up libffi-dev:armhf (3.3-5) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libboost-python1.71.0 (1.71.0-7+b1) ...
Setting up libboost-date-time1.71.0:armhf (1.71.0-7+b1) ...
Setting up python-babel-localedata (2.8.0+dfsg.1-4) ...
Setting up rapidjson-dev (1.1.0+dfsg2-6) ...
Setting up postgresql-client-13 (13.1-1+b1) ...
update-alternatives: using /usr/share/postgresql/13/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode
Setting up libmaeparser1:armhf (1.2.4-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libz3-4:armhf (4.8.9-1) ...
Setting up libblas3:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libuv1:armhf (1.40.0-1) ...
Setting up libpfm4:armhf (4.11.1+git4-gfa84c27-1) ...
Setting up libexpat1-dev:armhf (2.2.10-1) ...
Setting up libjpeg62-turbo:armhf (1:2.0.5-1.1) ...
Setting up libsqlite3-dev:armhf (3.34.0-1) ...
Setting up libx11-data (2:1.6.12-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libboost-atomic1.71.0:armhf (1.71.0-7+b1) ...
Setting up libteckit0:armhf (2.5.10+ds1-3) ...
Setting up libapache-pom-java (18-1) ...
Setting up libncurses6:armhf (6.2+20201114-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.8-2) ...
Setting up t1utils (1.41-4) ...
Setting up libimagequant0:armhf (2.12.2-1.1) ...
Setting up libpng16-16:armhf (1.6.37-3) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (67.1-4) ...
Setting up fonts-dejavu-core (2.37-2) ...
Setting up libboost-regex1.71.0:armhf (1.71.0-7+b1) ...
Setting up ucf (3.0043) ...
Setting up libcmark-gfm0:armhf (0.29.0.gfm.0-6) ...
Setting up libgc1:armhf (1:8.0.4-2.1) ...
Setting up libltdl7:armhf (2.4.6-14) ...
Setting up libfftw3-double3:armhf (3.3.8-2) ...
Setting up libkpathsea6:armhf (2020.20200327.54578-5) ...
Setting up libgfortran5:armhf (10.2.0-19+rpi1) ...
Setting up libjsoncpp24:armhf (1.9.4-3) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libcoordgen1:armhf (1.4.2-1) ...
Setting up liblqr-1-0:armhf (0.4.2-2.1) ...
Setting up librhash0:armhf (1.4.0-1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libboost-thread1.71.0:armhf (1.71.0-7+b1) ...
Setting up fonts-lmodern (2.004.5-6) ...
Setting up libdav1d4:armhf (0.7.1-3+rpi1) ...
Setting up libopenjp2-7:armhf (2.3.1-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libboost-serialization1.71.0:armhf (1.71.0-7+b1) ...
Setting up sgml-base (1.30) ...
Setting up cmake-data (3.18.4-1+rpi1) ...
Setting up libboost-system1.71.0:armhf (1.71.0-7+b1) ...
Setting up libboost-atomic1.71-dev:armhf (1.71.0-7+b1) ...
Setting up libboost-dev:armhf (1.71.0.3+b8) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up pandoc-data (2.9.2.1-1) ...
Setting up libcoordgen-dev:armhf (1.4.2-1) ...
Setting up libde265-0:armhf (1.0.7-1+rpi1) ...
Setting up openssl (1.1.1h-1) ...
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up mailcap (3.67) ...
Setting up libelf1:armhf (0.182-1) ...
Setting up libicu-dev:armhf (67.1-4) ...
Setting up libxml2:armhf (2.9.10+dfsg-6.3) ...
Setting up xdg-utils (1.1.3-2) ...
Setting up libprocps8:armhf (2:3.3.16-5) ...
Setting up node-jquery (3.5.1+dfsg+~3.5.4-3) ...
Setting up libsynctex2:armhf (2020.20200327.54578-5) ...
Setting up libpython3.9-stdlib:armhf (3.9.1~rc1-2+rpi1) ...
Setting up libpython3-stdlib:armhf (3.9.0-4) ...
Setting up libjs-underscore (1.9.1~dfsg-1) ...
Setting up libmaeparser-dev:armhf (1.2.4-1) ...
Setting up libfile-stripnondeterminism-perl (1.9.0-1) ...
Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
Setting up libz3-dev:armhf (4.8.9-1) ...
Setting up libboost-chrono1.71-dev:armhf (1.71.0-7+b1) ...
Setting up libice6:armhf (2:1.0.10-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.9.0-3) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2+20201114-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpdfbox-java (1:1.8.16-2) ...
Setting up mime-support (3.66) ...
Setting up libtool (2.4.6-14) ...
Setting up libarchive13:armhf (3.4.3-2) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libheif1:armhf (1.9.1-1) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libcommons-logging-java (1.2-2) ...
Setting up m4 (1.4.18-4) ...
Setting up libobjc4:armhf (10.2.0-19+rpi1) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libcmark-gfm-extensions0:armhf (0.29.0.gfm.0-6) ...
Setting up libboost-system1.71-dev:armhf (1.71.0-7+b1) ...
Setting up tex-common (6.15) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
126 added, 0 removed; done.
Setting up libpython3.9:armhf (3.9.1~rc1-2+rpi1) ...
Setting up libllvm11:armhf (1:11.0.0-5+rpi1) ...
Setting up libptexenc1:armhf (2020.20200327.54578-5) ...
Setting up pandoc (2.9.2.1-1) ...
Setting up libfreetype6:armhf (2.10.2+dfsg-4) ...
Setting up ssl-cert (1.0.40) ...
Setting up shared-mime-info (2.0-1) ...
Setting up postgresql-common (223) ...
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
Adding user postgres to group ssl-cert

Creating config file /etc/postgresql-common/createcluster.conf with new version
Building PostgreSQL dictionaries from installed myspell/hunspell packages...
Removing obsolete dictionary files:
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libclang1-11 (1:11.0.0-5+rpi1) ...
Setting up libboost-regex1.71-dev:armhf (1.71.0-7+b1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up libboost-serialization1.71-dev:armhf (1.71.0-7+b1) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.9.0-1) ...
Setting up libobjc-10-dev:armhf (10.2.0-19+rpi1) ...
Setting up dwz (0.13-5) ...
Setting up libboost-date-time1.71-dev:armhf (1.71.0-7+b1) ...
Setting up groff-base (1.22.4-5) ...
Setting up xml-core (0.18+nmu1) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up libclang-common-11-dev (1:11.0.0-5+rpi1) ...
Setting up bison (2:3.7.4+dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libcurl4:armhf (7.72.0-1) ...
Setting up libx11-6:armhf (2:1.6.12-1) ...
Setting up libharfbuzz0b:armhf (2.6.7-1) ...
Setting up libgdk-pixbuf-2.0-0:armhf (2.40.0+dfsg-8) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up libjs-jquery (3.5.1+dfsg+~3.5.4-3) ...
Setting up libboost-regex-dev:armhf (1.71.0.3+b8) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libboost-iostreams1.71-dev:armhf (1.71.0-7+b1) ...
Setting up python3.9 (3.9.1~rc1-2+rpi1) ...
Setting up automake (1:1.16.2-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libtinfo-dev:armhf (6.2+20201114-1) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up flex (2.6.4-8) ...
Setting up gettext (0.19.8.1-10) ...
Setting up llvm-11-runtime (1:11.0.0-5+rpi1) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up preview-latex-style (12.2-1) ...
Setting up libboost-thread1.71-dev:armhf (1.71.0-7+b1) ...
Setting up libboost-system-dev:armhf (1.71.0.3+b8) ...
Setting up libpango-1.0-0:armhf (1.46.2-3) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up llvm-11 (1:11.0.0-5+rpi1) ...
Setting up libpython3.9-dev:armhf (3.9.1~rc1-2+rpi1) ...
Setting up python3 (3.9.0-4) ...
Setting up libboost-iostreams-dev:armhf (1.71.0.3+b8) ...
Setting up man-db (2.9.3-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (1.1.1-1+b1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up python3-tz (2020.4-2) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libclang-cpp11 (1:11.0.0-5+rpi1) ...
Setting up python3-six (1.15.0-2) ...
Setting up python3-pil:armhf (8.0.1-1+b1) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.11.24+dfsg-1+b2) ...
Setting up python3-roman (2.0.0-5) ...
Setting up python3-jinja2 (2.11.2-1) ...
Setting up doxygen (1.8.20-5) ...
Setting up python3-pyparsing (2.4.7-1) ...
Setting up python3-certifi (2020.6.20-1) ...
Setting up python3-snowballstemmer (2.0.0-2) ...
Setting up python3-idna (2.10-1) ...
Setting up libxt6:armhf (1:1.2.0-1) ...
Setting up libjs-sphinxdoc (3.3.1-1) ...
Setting up python3-urllib3 (1.25.11-1) ...
Setting up python3.9-dev (3.9.1~rc1-2+rpi1) ...
Setting up cmake (3.18.4-1+rpi1+b1) ...
Setting up libmagickwand-6.q16-6:armhf (8:6.9.11.24+dfsg-1+b2) ...
Setting up python3-dateutil (2.8.1-4) ...
Setting up libcairo-gobject2:armhf (1.16.0-4) ...
Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ...
Setting up python3-lib2to3 (3.8.6-1) ...
Setting up clang-11 (1:11.0.0-5+rpi1) ...
Setting up libboost-thread-dev:armhf (1.71.0.3+b8) ...
Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ...
Setting up python3-imagesize (1.2.0-2) ...
Setting up python3-commonmark (0.9.1-3) ...
Setting up python3-pkg-resources (50.3.0-1) ...
Setting up python3-distutils (3.8.6-1) ...
Setting up dh-python (4.20201102) ...
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up libpython3-dev:armhf (3.9.0-4) ...
Setting up libxi6:armhf (2:1.7.10-1) ...
Setting up python3-babel (2.8.0+dfsg.1-4) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-alabaster (0.7.8-1.1) ...
Setting up po-debconf (1.0.21) ...
Setting up python3-yaml (5.3.1-3+b1) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up librsvg2-2:armhf (2.50.2+dfsg-1) ...
Setting up python3-pygments (2.7.1+dfsg-1) ...
Setting up python3-packaging (20.4-1) ...
Setting up python3-chardet (3.0.4-7) ...
Setting up sphinx-common (3.3.1-1) ...
Setting up python3-dev (3.9.0-4) ...
Setting up python3-requests (2.24.0+dfsg-1) ...
Setting up python3-numpy (1:1.19.4-1+b2) ...
Setting up imagemagick-6.q16 (8:6.9.11.24+dfsg-1+b2) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up texlive-binaries (2020.20200327.54578-5) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up texlive-base (2020.20200925-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up librsvg2-bin (2.50.2+dfsg-1) ...
Setting up llvm-11-tools (1:11.0.0-5+rpi1) ...
Setting up python3-pandas-lib:armhf (1.1.4+dfsg-1+rpi1) ...
Setting up libboost-python1.71-dev (1.71.0-7+b1) ...
Setting up libboost-python-dev (1.71.0.3+b8) ...
Setting up python3-pandas (1.1.4+dfsg-1+rpi1) ...
Setting up texlive-latex-base (2020.20200925-1) ...
Setting up texlive-latex-recommended (2020.20200925-1) ...
Setting up texlive-pictures (2020.20200925-1) ...
Setting up imagemagick (8:6.9.11.24+dfsg-1+b2) ...
Setting up texlive-fonts-recommended (2020.20200925-1) ...
Setting up llvm-11-dev (1:11.0.0-5+rpi1) ...
Setting up latexmk (1:4.70b-0.1) ...
Setting up texlive-latex-extra (2020.20201129-1) ...
Setting up postgresql-server-dev-13 (13.1-1+b1) ...
Setting up postgresql-server-dev-all (223) ...
Setting up debhelper (13.3) ...
Setting up dh-autoreconf (19) ...
Processing triggers for libc-bin (2.31-5+rpi1) ...
Processing triggers for sgml-base (1.30) ...
Setting up docutils-common (0.16+dfsg-3) ...
Processing triggers for sgml-base (1.30) ...
Setting up python3-docutils (0.16+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-sphinx (3.3.1-1) ...
Setting up python3-recommonmark (0.6.0+ds-1) ...
Setting up sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20200601) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.15) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
Toolchain package versions: binutils_2.35.1-4+rpi1 dpkg-dev_1.20.5+rpi1 g++-10_10.2.0-19+rpi1 gcc-10_10.2.0-19+rpi1 libc6-dev_2.31-5+rpi1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 linux-libc-dev_5.9.6-1+rpi1+b1
Package versions: adduser_3.118 apt_2.1.12 aptitude_0.8.13-2 aptitude-common_0.8.13-2 autoconf_2.69-11.1 automake_1:1.16.2-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.48 bash_5.1~rc3-1 binutils_2.35.1-4+rpi1 binutils-arm-linux-gnueabihf_2.35.1-4+rpi1 binutils-common_2.35.1-4+rpi1 bison_2:3.7.4+dfsg-1 bsdextrautils_2.36.1-2 bsdutils_1:2.36.1-2 build-essential_12.8 bzip2_1.0.8-4 ca-certificates_20200601 clang-11_1:11.0.0-5+rpi1 cmake_3.18.4-1+rpi1+b1 cmake-data_3.18.4-1+rpi1 coreutils_8.32-4 cpp_4:10.2.0-1+rpi1 cpp-10_10.2.0-19+rpi1 dash_0.5.11+git20200708+dd9ef66-2 debconf_1.5.74 debhelper_13.3 debianutils_4.11.2 dh-autoreconf_19 dh-python_4.20201102 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 docutils-common_0.16+dfsg-3 doxygen_1.8.20-5 dpkg_1.20.5+rpi1 dpkg-dev_1.20.5+rpi1 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.25.3-1.1 fdisk_2.36.1-2 file_1:5.39-3 findutils_4.7.0+git20201010-2 flex_2.6.4-8 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-2 fonts-lmodern_2.004.5-6 g++_4:10.2.0-1+rpi1 g++-10_10.2.0-19+rpi1 gcc_4:10.2.0-1+rpi1 gcc-10_10.2.0-19+rpi1 gcc-10-base_10.2.0-19+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.6-1 groff-base_1.22.4-5 gzip_1.10-2 hicolor-icon-theme_0.17-2 hostname_3.23 icu-devtools_67.1-4 imagemagick_8:6.9.11.24+dfsg-1+b2 imagemagick-6-common_8:6.9.11.24+dfsg-1 imagemagick-6.q16_8:6.9.11.24+dfsg-1+b2 init-system-helpers_1.59 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20200821-2 krb5-locales_1.18.3-4 latexmk_1:4.70b-0.1 libacl1_2.2.53-8 libaom0_1.0.0.errata1-3 libapache-pom-java_18-1 libapt-pkg6.0_2.1.12 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2 libasan6_10.2.0-19+rpi1 libassuan0_2.5.3-7.1 libatomic1_10.2.0-19+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3.1 libaudit1_1:2.8.5-3.1+b1 libbinutils_2.35.1-4+rpi1 libblas3_3.9.0-3 libblkid1_2.36.1-2 libboost-atomic1.71-dev_1.71.0-7+b1 libboost-atomic1.71.0_1.71.0-7+b1 libboost-chrono1.71-dev_1.71.0-7+b1 libboost-chrono1.71.0_1.71.0-7+b1 libboost-date-time1.71-dev_1.71.0-7+b1 libboost-date-time1.71.0_1.71.0-7+b1 libboost-dev_1.71.0.3+b8 libboost-iostreams-dev_1.71.0.3+b8 libboost-iostreams1.71-dev_1.71.0-7+b1 libboost-iostreams1.71.0_1.71.0-7+b1 libboost-python-dev_1.71.0.3+b8 libboost-python1.71-dev_1.71.0-7+b1 libboost-python1.71.0_1.71.0-7+b1 libboost-regex-dev_1.71.0.3+b8 libboost-regex1.71-dev_1.71.0-7+b1 libboost-regex1.71.0_1.71.0-7+b1 libboost-serialization1.71-dev_1.71.0-7+b1 libboost-serialization1.71.0_1.71.0-7+b1 libboost-system-dev_1.71.0.3+b8 libboost-system1.71-dev_1.71.0-7+b1 libboost-system1.71.0_1.71.0-7+b1 libboost-thread-dev_1.71.0.3+b8 libboost-thread1.71-dev_1.71.0-7+b1 libboost-thread1.71.0_1.71.0-7+b1 libboost1.71-dev_1.71.0-7+b1 libbrotli1_1.0.9-2+b1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-4 libc-bin_2.31-5+rpi1 libc-dev-bin_2.31-5+rpi1 libc6_2.31-5+rpi1 libc6-dev_2.31-5+rpi1 libcairo-gobject2_1.16.0-4 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcap2-bin_1:2.44-1 libcc1-0_10.2.0-19+rpi1 libclang-common-11-dev_1:11.0.0-5+rpi1 libclang-cpp11_1:11.0.0-5+rpi1 libclang1-11_1:11.0.0-5+rpi1 libcmark-gfm-extensions0_0.29.0.gfm.0-6 libcmark-gfm0_0.29.0.gfm.0-6 libcom-err2_1.45.6-1 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libcoordgen-dev_1.4.2-1 libcoordgen1_1.4.2-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.17-1 libcrypt1_1:4.4.17-1 libctf-nobfd0_2.35.1-4+rpi1 libctf0_2.35.1-4+rpi1 libcurl4_7.72.0-1 libcwidget4_0.5.18-5 libdatrie1_0.2.12-3+b5 libdav1d4_0.7.1-3+rpi1 libdb5.3_5.3.28+dfsg1-0.6 libde265-0_1.0.7-1+rpi1 libdebconfclient0_0.255 libdebhelper-perl_13.3 libdpkg-perl_1.20.5+rpi1 libedit2_3.1-20191231-1 libelf1_0.182-1 libexpat1_2.2.10-1 libexpat1-dev_2.2.10-1 libext2fs2_1.45.6-1 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-2 libffi-dev_3.3-5 libffi7_3.3-5 libfftw3-double3_3.3.8-2 libfile-stripnondeterminism-perl_1.9.0-1 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.2+dfsg-4 libfribidi0_1.0.8-2 libgc1_1:8.0.4-2.1 libgcc-10-dev_10.2.0-19+rpi1 libgcc-s1_10.2.0-19+rpi1 libgcrypt20_1.8.7-2 libgdbm-compat4_1.18.1-5.1 libgdbm6_1.18.1-5.1 libgdk-pixbuf-2.0-0_2.40.0+dfsg-8 libgdk-pixbuf2.0-common_2.40.0+dfsg-8 libgfortran5_10.2.0-19+rpi1 libglib2.0-0_2.66.3-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.6.15-4 libgomp1_10.2.0-19+rpi1 libgpg-error0_1.38-2 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.18.3-4 libharfbuzz0b_2.6.7-1 libheif1_1.9.1-1 libhogweed6_3.6-2 libice6_2:1.0.10-1 libicu-dev_67.1-4 libicu67_67.1-4 libidn2-0_2.3.0-4 libimagequant0_2.12.2-1.1 libisl23_0.23-1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:2.0.5-1.1 libjs-jquery_3.5.1+dfsg+~3.5.4-3 libjs-sphinxdoc_3.3.1-1 libjs-underscore_1.9.1~dfsg-1 libjsoncpp24_1.9.4-3 libk5crypto3_1.18.3-4 libkeyutils1_1.6.1-2 libkpathsea6_2020.20200327.54578-5 libkrb5-3_1.18.3-4 libkrb5support0_1.18.3-4 libksba8_1.5.0-2 liblapack3_3.9.0-3 liblcms2-2_2.9-4 libldap-2.4-2_2.4.56+dfsg-1+rpi1+b1 libldap-common_2.4.56+dfsg-1+rpi1 libllvm11_1:11.0.0-5+rpi1 liblqr-1-0_0.4.2-2.1 libltdl7_2.4.6-14 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmaeparser-dev_1.2.4-1 libmaeparser1_1.2.4-1 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmagickcore-6.q16-6_8:6.9.11.24+dfsg-1+b2 libmagickwand-6.q16-6_8:6.9.11.24+dfsg-1+b2 libmount1_2.36.1-2 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libncurses-dev_6.2+20201114-1 libncurses6_6.2+20201114-1 libncursesw6_6.2+20201114-1 libnettle8_3.6-2 libnghttp2-14_1.42.0-1 libnpth0_1.6-3 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnss-nis_3.1-4 libnss-nisplus_1.3-4 libobjc-10-dev_10.2.0-19+rpi1 libobjc4_10.2.0-19+rpi1 libopenjp2-7_2.3.1-1 libp11-kit0_0.23.21-2 libpam-cap_1:2.44-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.46.2-3 libpangocairo-1.0-0_1.46.2-3 libpangoft2-1.0-0_1.46.2-3 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre2-8-0_10.35-2 libpcre3_2:8.39-13 libpdfbox-java_1:1.8.16-2 libperl5.32_5.32.0-5 libpfm4_4.11.1+git4-gfa84c27-1 libpipeline1_1.5.3-1 libpixman-1-0_0.40.0-1 libpng16-16_1.6.37-3 libpq-dev_13.1-1+b1 libpq5_13.1-1+b1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1.1 libptexenc1_2020.20200327.54578-5 libpython3-dev_3.9.0-4 libpython3-stdlib_3.9.0-4 libpython3.9_3.9.1~rc1-2+rpi1 libpython3.9-dev_3.9.1~rc1-2+rpi1 libpython3.9-minimal_3.9.1~rc1-2+rpi1 libpython3.9-stdlib_3.9.1~rc1-2+rpi1 libreadline8_8.1~rc3-1 librhash0_1.4.0-1 librsvg2-2_2.50.2+dfsg-1 librsvg2-bin_2.50.2+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.5.0-3+rpi1 libselinux1_3.1-2+b1 libsemanage-common_3.1-1 libsemanage1_3.1-1+b1 libsepol1_3.1-1 libsigc++-2.0-0v5_2.10.4-2 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.36.1-2 libsqlite3-0_3.34.0-1 libsqlite3-dev_3.34.0-1 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1h-1 libstdc++-10-dev_10.2.0-19+rpi1 libstdc++6_10.2.0-19+rpi1 libsub-override-perl_0.09-2 libsynctex2_2020.20200327.54578-5 libsystemd0_246.6-4+rpi1 libtasn1-6_4.16.0-2 libteckit0_2.5.10+ds1-3 libtexlua53_2020.20200327.54578-5 libtexluajit2_2020.20200327.54578-5 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo-dev_6.2+20201114-1 libtinfo6_6.2+20201114-1 libtirpc-common_1.2.6-3 libtirpc-dev_1.2.6-3 libtirpc3_1.2.6-3 libtool_2.4.6-14 libubsan1_10.2.0-19+rpi1 libuchardet0_0.0.7-1 libudev1_246.6-4+rpi1 libunistring2_0.9.10-4 libuuid1_2.36.1-2 libuv1_1.40.0-1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libx11-6_2:1.6.12-1 libx11-data_2:1.6.12-1 libx265-192_3.4-2 libxapian30_1.4.17-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.10-1 libxml2_2.9.10+dfsg-6.3 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.2.0-1 libyaml-0-2_0.2.2-1 libz3-4_4.8.9-1 libz3-dev_4.8.9-1 libzstd1_1.4.5+dfsg-4+rpi1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.9.6-1+rpi1+b1 llvm-11_1:11.0.0-5+rpi1 llvm-11-dev_1:11.0.0-5+rpi1 llvm-11-runtime_1:11.0.0-5+rpi1 llvm-11-tools_1:11.0.0-5+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 mailcap_3.67 make_4.3-4 man-db_2.9.3-2 mawk_1.3.4.20200120-2 media-types_1.0.1 mime-support_3.66 mount_2.36.1-2 ncurses-base_6.2+20201114-1 ncurses-bin_6.2+20201114-1 netbase_6.2 node-jquery_3.5.1+dfsg+~3.5.4-3 openssl_1.1.1h-1 pandoc_2.9.2.1-1 pandoc-data_2.9.2.1-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.32.0-5 perl-base_5.32.0-5 perl-modules-5.32_5.32.0-5 pinentry-curses_1.1.0-4 po-debconf_1.0.21 postgresql-client-13_13.1-1+b1 postgresql-client-common_223 postgresql-common_223 postgresql-server-dev-13_13.1-1+b1 postgresql-server-dev-all_223 preview-latex-style_12.2-1 procps_2:3.3.16-5 python-babel-localedata_2.8.0+dfsg.1-4 python3_3.9.0-4 python3-alabaster_0.7.8-1.1 python3-babel_2.8.0+dfsg.1-4 python3-certifi_2020.6.20-1 python3-chardet_3.0.4-7 python3-commonmark_0.9.1-3 python3-dateutil_2.8.1-4 python3-dev_3.9.0-4 python3-distutils_3.8.6-1 python3-docutils_0.16+dfsg-3 python3-idna_2.10-1 python3-imagesize_1.2.0-2 python3-jinja2_2.11.2-1 python3-lib2to3_3.8.6-1 python3-markupsafe_1.1.1-1+b1 python3-minimal_3.9.0-4 python3-numpy_1:1.19.4-1+b2 python3-packaging_20.4-1 python3-pandas_1.1.4+dfsg-1+rpi1 python3-pandas-lib_1.1.4+dfsg-1+rpi1 python3-pil_8.0.1-1+b1 python3-pkg-resources_50.3.0-1 python3-pygments_2.7.1+dfsg-1 python3-pyparsing_2.4.7-1 python3-recommonmark_0.6.0+ds-1 python3-requests_2.24.0+dfsg-1 python3-roman_2.0.0-5 python3-six_1.15.0-2 python3-snowballstemmer_2.0.0-2 python3-sphinx_3.3.1-1 python3-tz_2020.4-2 python3-urllib3_1.25.11-1 python3-yaml_5.3.1-3+b1 python3.9_3.9.1~rc1-2+rpi1 python3.9-dev_3.9.1~rc1-2+rpi1 python3.9-minimal_3.9.1~rc1-2+rpi1 rapidjson-dev_1.1.0+dfsg2-6 raspbian-archive-keyring_20120528.2 readline-common_8.1~rc3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rdkit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.30 shared-mime-info_2.0-1 sphinx-common_3.3.1-1 ssl-cert_1.0.40 sysvinit-utils_2.96-5 t1utils_1.41-4 tar_1.32+dfsg-1+rpi1 tex-common_6.15 texlive-base_2020.20200925-1 texlive-binaries_2020.20200327.54578-5 texlive-fonts-recommended_2020.20200925-1 texlive-latex-base_2020.20200925-1 texlive-latex-extra_2020.20201129-1 texlive-latex-recommended_2020.20200925-1 texlive-pictures_2020.20200925-1 tzdata_2020d-1 ucf_3.0043 util-linux_2.36.1-2 x11-common_1:7.7+21 xdg-utils_1.1.3-2 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.4Ah17nED/trustedkeys.kbx': General error
gpgv: Signature made Mon Nov  2 06:20:44 2020 UTC
gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv:                issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./rdkit_202003.4-4.dsc
dpkg-source: info: extracting rdkit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking rdkit_202003.4.orig.tar.xz
dpkg-source: info: unpacking rdkit_202003.4-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying NoDownloads.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: info: applying postgres_disable_failing_tests.patch
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying catch2_header.patch
dpkg-source: info: applying postgres_alternative_test_outputs.patch
dpkg-source: info: applying postgres_compile_fixes.patch
dpkg-source: info: applying sphinx_compile_fixes.patch

Check disc space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 202003.4-4+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-44db64b2-17d6-468e-af6f-819025443c4a
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=xterm
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 202003.4-4+b1
dpkg-buildpackage: info: source distribution bullseye-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
pg_buildext checkcontrol
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
dh clean --with python3 --buildsystem=cmake --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
find /<<PKGBUILDDIR>> -name "*.pyc" | xargs rm -f
rm -f -r Projects/DbCLI/testData/bzr/ rdkit/Chem/inchi.py
rm -f -r Docs/Book/_build Code/docs rdkit/docs Code/doxygen_sqlite3.db
rm -f \
Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_reference.log \
Code/ForceField/MMFF/test_data/MMFF94s_reference.log \
Code/ForceField/MMFF/test_data/testMMFFForceField.log \
Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf \
Code/GraphMol/Depictor/test_data/collisions.out.sdf \
Code/GraphMol/Depictor/test_data/first_200.out.sdf \
Code/GraphMol/Depictor/test_data/test1.out.sdf \
Code/GraphMol/FileParsers/test_data/blah.sdf \
Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.tdt \
Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf \
Code/GraphMol/FileParsers/test_data/outSmiles.csv \
Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf \
Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf \
Code/GraphMol/SLNParse/lex.yysln.cpp \
Code/GraphMol/SLNParse/sln.tab.cpp \
Code/GraphMol/SLNParse/sln.tab.hpp \
Code/GraphMol/SmilesParse/lex.yysmarts.cpp \
Code/GraphMol/SmilesParse/lex.yysmiles.cpp \
Code/GraphMol/SmilesParse/smarts.tab.cpp \
Code/GraphMol/SmilesParse/smarts.tab.hpp \
Code/GraphMol/SmilesParse/smiles.tab.cpp \
Code/GraphMol/SmilesParse/smiles.tab.hpp \
Code/GraphMol/Wrap/test_data/outNCI_few.sdf \
Code/GraphMol/Wrap/test_data/outSmiles.txt \
Code/RDGeneral/versions.cpp \
Docs/Book/Cartridge.rst \
Docs/Book/Cookbook.rst \
Docs/Book/Install.rst \
Docs/Book/Overview.rst \
rdkit/ML/Data/test_data/testgeneral.dat.pkl \
rdkit/ML/Data/test_data/testquant.qdat.pkl
rm -f Code/RDGeneral/versions.h rdkit/sping/tests/testallps.ps
dh_auto_clean
dh_auto_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use)
pg_buildext clean /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v
rm -rf build-*/
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_clean -O--buildsystem=cmake -O--parallel
dh_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use)
 debian/rules build-arch
dh build-arch --with python3 --buildsystem=cmake --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_update_autotools_config -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DPYTHON_EXECUTABLE=/usr/bin/python3.9 ../
dh_auto_configure: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_POPCNT=OFF -DRDK_USE_URF=OFF -DBoost_NO_BOOST_CMAKE=TRUE -DCMAKE_INSTALL_PREFIX=/usr -DPYTHON_EXECUTABLE=/usr/bin/python3.9 ../ ..
-- The C compiler identification is GNU 10.2.0
-- The CXX compiler identification is GNU 10.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Searching 16 bit integer - Using unsigned short
-- Check if the system is big endian - little endian
-- Found Catch2 source in /<<PKGBUILDDIR>>/External/catch/catch
CATCH: /<<PKGBUILDDIR>>/External/catch/catch/single_include
-- Found PythonInterp: /usr/bin/python3.9 (found version "3.9.1") 
-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.9.so (found version "3.9.1rc1") 
CMake Warning at /usr/share/cmake-3.18/Modules/FindBoost.cmake:2018 (message):
  No header defined for python-py39; skipping header check (note: header-only
  libraries have no designated component)
Call Stack (most recent call first):
  CMakeLists.txt:255 (find_package)


Python Install directory /usr/lib/python3/dist-packages
PYTHON Py_ENABLE_SHARED: 1
PYTHON USING LINK LINE: -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
Eigen3 not found, disabling the Descriptors3D build.
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Found Boost: /usr/include (found suitable version "1.71.0", minimum required is "1.56.0") found components: serialization 
== Using strict rotor definition
-- Found Boost: /usr/include (found suitable version "1.71.0", minimum required is "1.56.0") found components: system iostreams regex 
-- maeparser include dir set as '/usr/include'
-- maeparser libraries set as '/usr/lib/arm-linux-gnueabihf/libmaeparser.so'
-- Found maeparser: /usr/include  
-- coordgen include dir set as /usr/include
-- coordgen libraries set as '/usr/lib/arm-linux-gnueabihf/libcoordgen.so'
-- Found coordgen: /usr/include  
== Updating Filters.cpp from pains file
== Done updating pains files
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && make -j4 VERBOSE=1
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/depend
make  -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/depend
make  -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/depend
make  -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/depend.internal".
Scanning dependencies of target coordgen_support
Scanning dependencies of target inchi_support
Scanning dependencies of target catch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/build
make  -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API && /usr/bin/cmake -E copy /<<PKGBUILDDIR>>/External/INCHI-API/python/noinchi.py /<<PKGBUILDDIR>>/rdkit/Chem/inchi.py
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/coordgen_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/catch/CMakeFiles/catch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend.internal".
Scanning dependencies of target ringdecomposerlib_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target coordgen_support
[  0%] Built target catch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend
make  -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/DependInfo.cmake --color=
[  0%] Built target ringdecomposerlib_support
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target inchi_support
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/depend.internal".
Scanning dependencies of target RDStreams
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/build
Scanning dependencies of target RDGeneral
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend.internal".
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/build
Scanning dependencies of target hc
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Building CXX object Code/RDStreams/CMakeFiles/RDStreams.dir/streams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RDSTREAMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRDStreams_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDStreams.dir/streams.cpp.o -c /<<PKGBUILDDIR>>/Code/RDStreams/streams.cpp
[  0%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/Invariant.cpp.o
[  0%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/types.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeneral.dir/Invariant.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeneral.dir/types.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/types.cpp
[  0%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hc.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cc -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -fPIC -o CMakeFiles/hc.dir/hc.c.o -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/hc.c
[  1%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hcdriver.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cc -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -fPIC -o CMakeFiles/hc.dir/hcdriver.c.o -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/hcdriver.c
[  1%] Linking C shared library ../../../../lib/libRDKithc.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/hc.dir/link.txt --verbose=1
/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKithc.so.1 -o ../../../../lib/libRDKithc.so.1.2020.03.4 CMakeFiles/hc.dir/hc.c.o CMakeFiles/hc.dir/hcdriver.c.o 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libRDKithc.so.1.2020.03.4 ../../../../lib/libRDKithc.so.1 ../../../../lib/libRDKithc.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  1%] Built target hc
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeneral.dir/utils.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/utils.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/RDLog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeneral.dir/RDLog.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/versions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeneral.dir/versions.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/versions.cpp
[  2%] Linking CXX shared library ../../lib/libRDKitRDGeneral.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeneral.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeneral.so.1 -o ../../lib/libRDKitRDGeneral.so.1.2020.03.4 CMakeFiles/RDGeneral.dir/Invariant.cpp.o CMakeFiles/RDGeneral.dir/types.cpp.o CMakeFiles/RDGeneral.dir/utils.cpp.o CMakeFiles/RDGeneral.dir/RDLog.cpp.o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o CMakeFiles/RDGeneral.dir/versions.cpp.o  -lpthread 
[  2%] Linking CXX shared library ../../lib/libRDKitRDStreams.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDStreams.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDStreams.so.1 -o ../../lib/libRDKitRDStreams.so.1.2020.03.4 CMakeFiles/RDStreams.dir/streams.cpp.o  -lboost_system -lboost_iostreams -lboost_regex -lboost_system -lboost_iostreams -lboost_regex 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeneral.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1 ../../lib/libRDKitRDGeneral.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Built target RDGeneral
make  -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make  -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make  -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend.internal".
Scanning dependencies of target RDBoost
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDStreams.so.1.2020.03.4 ../../lib/libRDKitRDStreams.so.1 ../../lib/libRDKitRDStreams.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/depend.internal".
Scanning dependencies of target EigenSolvers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Building CXX object Code/RDBoost/CMakeFiles/RDBoost.dir/Wrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/c++ -DRDBoost_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDBOOST_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDBoost.dir/Wrap.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.cpp
Scanning dependencies of target DataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
[  2%] Building CXX object Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/c++ -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/BitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.cpp
[  2%] Built target RDStreams
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/depend.internal".
Scanning dependencies of target testRDValue
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp
[  2%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.cpp
[  2%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o  ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Built target EigenSolvers
[  2%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.cpp
[  2%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2020.03.4 CMakeFiles/RDBoost.dir/Wrap.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2020.03.4 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Built target RDBoost
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Utils.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' changed in GCC 7.1
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/depend.internal".
Scanning dependencies of target testDict
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testDict.dir/testDict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/base64.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.cpp
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testVector() [with T = double]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testVector() [with T = long double]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.cpp
[  3%] Linking CXX executable testRDValue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDValue.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testRDValue.dir/testRDValue.cpp.o -o testRDValue  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target testRDValue
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend.internal".
Scanning dependencies of target rdBase
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Building CXX object Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  171 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testGithub2910()':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testGithub940()':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
                 from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:25,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Distance = int; _Tp = std::pair<double, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:25,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/10/bits/stl_algo.h:1881:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1881 |     __final_insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1881:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1886 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1891 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/10/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' changed in GCC 7.1
 2193 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:27,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1819 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
                 from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:27,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Distance = int; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testRDAny()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:27,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1945 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h:21,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:26,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:27,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/10/bits/stl_algo.h: In function 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >&, T, const RDKit::{anonymous}::sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const RDKit::{anonymous}::sim_args*)]':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1974 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1975 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1976 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1886 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1891 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:25,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1662 |     __heap_select(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1945 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1937 |       std::__heap_select(__first, __middle, __last, __comp);
      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTverskyNeighbors(const uint8_t*, double, double, double, bool) const':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1974 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1975 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1976 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1977 |    std::__final_insertion_sort(__first, __last, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTanimotoNeighbors(const uint8_t*, double, bool) const':
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1974 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1975 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1976 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/10/bits/stl_algo.h:1977:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1977 |    std::__final_insertion_sort(__first, __last, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/depend.internal".
[  4%] Linking CXX shared library ../../lib/libRDKitDataStructs.so
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/depend.internal".
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
Scanning dependencies of target testMatrices
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2020.03.4 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[  5%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testMatrices.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target DataStructs
make  -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/depend.internal".
Scanning dependencies of target Catalogs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In function 'void testVectToString()':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++ -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.cpp
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++ -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.cpp
[  5%] Linking CXX executable testDict
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDict.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDict.dir/testDict.cpp.o -o testDict  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testDict
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++ -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.cpp
make  -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/depend.internal".
Scanning dependencies of target testQuery
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/Query/CMakeFiles/testQuery.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testQuery.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/Query/test.cpp
[  5%] Linking CXX shared library ../../lib/libRDKitCatalogs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Catalogs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitCatalogs.so.1 -o ../../lib/libRDKitCatalogs.so.1.2020.03.4 CMakeFiles/Catalogs.dir/Catalog.cpp.o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../lib/libRDKitCatalogs.so.1 ../../lib/libRDKitCatalogs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target Catalogs
make  -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend.internal".
Scanning dependencies of target testMatCalc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/testMatCalc.cpp
[  5%] Linking CXX executable testMatrices
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatrices.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMatrices.dir/testMatrices.cpp.o -o testMatrices  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testMatrices
make  -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend.internal".
Scanning dependencies of target rdMetricMatrixCalc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
[  5%] Linking CXX executable testMatCalc
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -o testMatCalc  ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testMatCalc
make  -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend.internal".
Scanning dependencies of target SimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.cpp
In file included from /usr/include/c++/10/algorithm:61,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]':
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1921 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:61,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_algobase.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.cpp
In file included from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  6%] Linking CXX executable testQuery
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/cmake -E cmake_link_script CMakeFiles/testQuery.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testQuery.dir/test.cpp.o -o testQuery  ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target testQuery
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend.internal".
Scanning dependencies of target Clustering
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/c++ -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/Clustering.cpp
[  6%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.cpp
In file included from /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:15:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[  6%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMetricMatrixCalc.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o  ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target rdMetricMatrixCalc
make  -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend.internal".
Scanning dependencies of target InfoTheory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/c++ -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp
[  6%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2020.03.4 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o  ../../lib/libRDKithc.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2020.03.4 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target SimDivPickers
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend.internal".
Scanning dependencies of target RDGeometryLib
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/point.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]':
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = true; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  171 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
                 from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >; _Distance = int; _Tp = std::pair<double, int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDInfoTheory::gtDIPair>]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<double, int>&}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In member function 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[  6%] Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Clustering.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/Cluster/Clustering.so CMakeFiles/Clustering.dir/Clustering.cpp.o  ../../../../lib/libRDKithc.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target Clustering
make  -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  184 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; bool NoProxy = true; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/depend.internal".
Scanning dependencies of target testFPB
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  6%] Building CXX object Code/DataStructs/CMakeFiles/testFPB.dir/testFPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testFPB.dir/testFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testFPB.cpp
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]':
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
[  7%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2020.03.4 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, true>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, true>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, true> >, unsigned int>; Data = double; Index = unsigned int]':
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2020.03.4 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Built target InfoTheory
[  8%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.cpp
make  -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/depend.internal".
Scanning dependencies of target testDataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Building CXX object Code/DataStructs/CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp: In function 'void test5DiscreteVectOps2()':
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:479:19: warning: implicitly-declared 'RDKit::DiscreteValueVect& RDKit::DiscreteValueVect::operator=(const RDKit::DiscreteValueVect&)' is deprecated [-Wdeprecated-copy]
  479 |   vect5 = vect1 - vect2;
      |                   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:22:
/<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:50:3: note: because 'RDKit::DiscreteValueVect' has user-provided 'RDKit::DiscreteValueVect::DiscreteValueVect(const RDKit::DiscreteValueVect&)'
   50 |   DiscreteValueVect(const DiscreteValueVect &other);
      |   ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:481:19: warning: implicitly-declared 'RDKit::DiscreteValueVect& RDKit::DiscreteValueVect::operator=(const RDKit::DiscreteValueVect&)' is deprecated [-Wdeprecated-copy]
  481 |   vect5 = vect2 - vect1;
      |                   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:22:
/<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:50:3: note: because 'RDKit::DiscreteValueVect' has user-provided 'RDKit::DiscreteValueVect::DiscreteValueVect(const RDKit::DiscreteValueVect&)'
   50 |   DiscreteValueVect(const DiscreteValueVect &other);
      |   ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp: In function 'void test6SparseIntVect()':
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:629:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  629 |     iV3 = iV1 & iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:727:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  727 |     iV3 = iV1 | iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:810:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  810 |     iV3 = iV1 + iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:866:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  866 |     iV3 = iV1 - iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
[  8%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.cpp
[  8%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp
[  8%] Linking CXX executable testFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFPB.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFPB.dir/testFPB.cpp.o -o testFPB  ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target testFPB
[  8%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp
[  8%] Linking CXX shared module ../../../rdkit/rdBase.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdBase.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o  ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target rdBase
make  -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
make  -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend.internal".
Scanning dependencies of target testMultiFPB
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend.internal".
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[  8%] Building CXX object Code/DataStructs/CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++ -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testMultiFPB.cpp
Scanning dependencies of target cDataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/DataStructs.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DataStructs.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h:14,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:17:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'std::vector<RDGeom::Point3D> RDGeom::findGridTerminalPoints(const RDGeom::UniformGrid3D&, double, double)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = ExplicitBitVect]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  9%] Linking CXX shared library ../../lib/libRDKitRDGeometryLib.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeometryLib.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o  ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target RDGeometryLib
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DiscreteValueVect.cpp
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend.internal".
Scanning dependencies of target pickersTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp
[  9%] Linking CXX executable testDataStructs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -o testDataStructs  ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target testDataStructs
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_SparseBV.cpp
[  9%] Linking CXX executable testMultiFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultiFPB.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -o testMultiFPB  ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target testMultiFPB
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend.internal".
Scanning dependencies of target testSimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/testPickers.cpp
[  9%] Linking CXX executable testSimDivPickers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -o testSimDivPickers  ../../lib/libRDKitSimDivPickers.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread ../../lib/libRDKithc.so.1.2020.03.4 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target testSimDivPickers
make  -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend.internal".
Scanning dependencies of target rdSimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
In file included from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:19:
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h: In function 'RDKit::INT_VECT RDPickers::MaxMinPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, int, double&) const [with T = pyobjFunctor]':
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
[  9%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp:18:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = long long int]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = long long unsigned int]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_BitOps.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp:13:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp:19:
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h: In member function 'unsigned int RDPickers::LeaderPickerState<T>::compact(int*, int*, unsigned int) [with T = pyobjFunctor]':
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
[ 10%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o
[ 10%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp
make  -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend.internal".
Scanning dependencies of target rdInfoTheory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
[ 10%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o  ../../../lib/libRDKitSimDivPickers.so.1.2020.03.4 ../../../lib/libRDKithc.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target rdSimDivPickers
[ 10%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_FPB.cpp
[ 10%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp
make  -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/depend.internal".
Scanning dependencies of target cQuantize
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcQuantize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cQuantize.dir/cQuantize.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Data/cQuantize.cpp
[ 11%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_Utils.cpp
[ 11%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp
[ 11%] Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/cmake -E cmake_link_script CMakeFiles/cQuantize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o  ../../../lib/libRDKitInfoTheory.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target cQuantize
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend.internal".
Scanning dependencies of target ChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++ -DChemicalFeatures_EXPORTS -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.cpp
[ 11%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 11%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdInfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o  ../../../../lib/libRDKitInfoTheory.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Linking CXX executable pickersTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/pickersTestsCatch.dir/link.txt --verbose=1
[ 11%] Built target cDataStructs
make  -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
[ 11%] Built target rdInfoTheory
make  -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -o pickersTestsCatch  ../../lib/libRDKitSimDivPickers.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 ../../lib/libRDKithc.so.1.2020.03.4 -lpthread 
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend.internal".
Scanning dependencies of target Alignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++ -DAlignment_EXPORTS -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Alignment.dir/AlignPoints.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.cpp
Scanning dependencies of target GraphMol
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target pickersTestsCatch
[ 11%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.cpp
[ 12%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2020.03.4 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2020.03.4 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target ChemicalFeatures
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend.internal".
Scanning dependencies of target geometryTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp
[ 12%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2020.03.4 CMakeFiles/Alignment.dir/AlignPoints.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target Alignment
make  -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/depend.internal".
Scanning dependencies of target testGrid
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testGrid.cpp
[ 12%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 13%] Linking CXX executable testGrid
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testGrid.dir/testGrid.cpp.o -o testGrid  ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target testGrid
make  -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/depend.internal".
Scanning dependencies of target testTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testTransforms.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp
[ 13%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp
[ 14%] Linking CXX executable testTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testTransforms.dir/testTransforms.cpp.o -o testTransforms  ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Built target testTransforms
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend.internal".
Scanning dependencies of target rdGeometry
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/Point.cpp
[ 14%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/UniformGrid3D.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp:3:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp:3:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<int>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFrags(const RDKit::ROMol&, bool, RDKit::INT_VECT*, RDKit::VECT_INT_VECT*, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/rdGeometry.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp
make  -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/depend.internal".
Scanning dependencies of target testConrec
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Numerics/CMakeFiles/testConrec.dir/testConrec.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testConrec.dir/testConrec.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp: In function 'int RDKit::MolOps::symmetrizeSSSR(RDKit::ROMol&, RDKit::VECT_INT_VECT&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:1139:16: warning: variable 'nsssr' set but not used [-Wunused-but-set-variable]
 1139 |   unsigned int nsssr;
      |                ^~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp: In function 'void RDKit::MolOps::findRingFamilies(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:1362:36: warning: unused parameter 'mol' [-Wunused-parameter]
 1362 | void findRingFamilies(const ROMol &mol) {
      |                       ~~~~~~~~~~~~~^~~
[ 16%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Geometry/rdGeometry.so CMakeFiles/rdGeometry.dir/Point.cpp.o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target rdGeometry
make  -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend.internal".
Scanning dependencies of target testAlignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++ -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/testAlignment.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 17%] Linking CXX executable testAlignment
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testAlignment.dir/testAlignment.cpp.o -o testAlignment  ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target testAlignment
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend.internal".
Scanning dependencies of target rdAlignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp
In file included from /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:16:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 18%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Numerics/rdAlignment.so CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o  ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target rdAlignment
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend.internal".
Scanning dependencies of target testChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++ -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/testChemicalFeatures.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 18%] Linking CXX executable testChemicalFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -o testChemicalFeatures  ../../lib/libRDKitChemicalFeatures.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target testChemicalFeatures
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/10/bits/stl_vector.h: In member function 'unsigned int RDKit::ROMol::addAtom(RDKit::Atom*, bool, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {conrec::ConrecSegment}; _Tp = conrec::ConrecSegment; _Alloc = std::allocator<conrec::ConrecSegment>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<conrec::ConrecSegment>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void conrec::Contour(const double*, size_t, size_t, size_t, size_t, const double*, const double*, size_t, double*, std::vector<conrec::ConrecSegment>&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<conrec::ConrecSegment*, std::vector<conrec::ConrecSegment> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::atomicData&}; _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::atomicData>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::PeriodicTable::PeriodicTable()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.cpp
/usr/include/c++/10/bits/stl_vector.h: In member function 'unsigned int RDKit::RWMol::addAtom(bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 18%] Linking CXX executable geometryTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/geometryTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -o geometryTestsCatch  ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target geometryTestsCatch
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp: In instantiation of 'static RDKit::Atom* RDKit::MolPickler::_addAtomFromPickle(std::istream&, RDKit::ROMol*, RDGeom::Point3D&, int, bool) [with T = int; std::istream = std::basic_istream<char>]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1040:39:   required from 'static void RDKit::MolPickler::_depickle(std::istream&, RDKit::ROMol*, int, int) [with T = int; std::istream = std::basic_istream<char>]'
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:843:57:   required from here
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1580:22: warning: comparison is always false due to limited range of data type [-Wtype-limits]
 1580 |         if ((tmpChar < 0 || tmpChar > 127) && version > 9000) {
      |              ~~~~~~~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp: In instantiation of 'static RDKit::Atom* RDKit::MolPickler::_addAtomFromPickle(std::istream&, RDKit::ROMol*, RDGeom::Point3D&, int, bool) [with T = unsigned char; std::istream = std::basic_istream<char>]':
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1040:39:   required from 'static void RDKit::MolPickler::_depickle(std::istream&, RDKit::ROMol*, int, int) [with T = unsigned char; std::istream = std::basic_istream<char>]'
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:845:63:   required from here
/<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:1580:22: warning: comparison is always false due to limited range of data type [-Wtype-limits]
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void RDKit::MolPickler::_addAtomFromPickleV1(std::istream&, RDKit::ROMol*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Kekulize.cpp
[ 19%] Linking CXX executable testConrec
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConrec.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testConrec.dir/testConrec.cpp.o -o testConrec  ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target testConrec
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDiscriminators.cpp
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ConjugHybrid.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDiscriminators.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.cpp
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Renumber.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::{anonymous}::setHydrogenCoords(RDKit::ROMol*, unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AdjustQuery.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/Resonance.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp: In member function 'bool RDKit::SubstanceGroup::adjustToRemovedAtom(unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:179:40: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  179 |     if (ap.aIdx == atomIdx || ap.lvIdx == atomIdx) {
      |                               ~~~~~~~~~^~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:188:18: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  188 |     if (ap.lvIdx > atomIdx) {
      |         ~~~~~~~~~^~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp: In member function 'bool RDKit::SubstanceGroup::includesAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:232:40: warning: comparison of integer expressions of different signedness: 'const int' and 'unsigned int' [-Wsign-compare]
  232 |     if (ap.aIdx == atomIdx || ap.lvIdx == atomIdx) {
      |                               ~~~~~~~~~^~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::array<RDGeom::Point3D, 3>&}; _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::array<RDGeom::Point3D, 3> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::SubstanceGroup::addBracket(const Bracket&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::SubstanceGroup::CState>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::SubstanceGroup::addCState(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2020.03.4 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target GraphMol
make  -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make  -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend.internal".
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend.internal".
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend.internal".
[ 21%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DTrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Trajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp
Scanning dependencies of target MolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++ -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp
Scanning dependencies of target SubstructMatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target SmilesParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp: In member function 'bool RDKit::detail::MolMatchFinalCheckFunctor::operator()(const node_id*, const node_id*) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp:285:49: warning: comparison of integer expressions of different signedness: 'std::unordered_map<unsigned int, unsigned int>::mapped_type' {aka 'unsigned int'} and 'const value_type' {aka 'const int'} [-Wsign-compare]
  285 |         if (q_to_mol[qBnd->getStereoAtoms()[0]] == mBnd->getStereoAtoms()[0]) {
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp:288:49: warning: comparison of integer expressions of different signedness: 'std::unordered_map<unsigned int, unsigned int>::mapped_type' {aka 'unsigned int'} and 'const value_type' {aka 'const int'} [-Wsign-compare]
  288 |         if (q_to_mol[qBnd->getStereoAtoms()[1]] == mBnd->getStereoAtoms()[1]) {
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp:293:49: warning: comparison of integer expressions of different signedness: 'std::unordered_map<unsigned int, unsigned int>::mapped_type' {aka 'unsigned int'} and 'const value_type' {aka 'const int'} [-Wsign-compare]
  293 |         if (q_to_mol[qBnd->getStereoAtoms()[0]] == mBnd->getStereoAtoms()[1]) {
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp:296:49: warning: comparison of integer expressions of different signedness: 'std::unordered_map<unsigned int, unsigned int>::mapped_type' {aka 'unsigned int'} and 'const value_type' {aka 'const int'} [-Wsign-compare]
  296 |         if (q_to_mol[qBnd->getStereoAtoms()[1]] == mBnd->getStereoAtoms()[0]) {
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_insert_aux(std::vector<_Tp, _Alloc>::iterator, _Arg&&) [with _Arg = RDKit::Snapshot; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/10/bits/vector.tcc:395:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  395 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'unsigned int RDKit::Trajectory::insertSnapshot(unsigned int, RDKit::Snapshot)':
/usr/include/c++/10/bits/vector.tcc:154:19: note: parameter passing for argument of type 'const __gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  154 |      _M_insert_aux(__pos, std::move(__x_copy._M_val()));
      |      ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp:26:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2020.03.4 CMakeFiles/Trajectory.dir/Trajectory.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target Trajectory
[ 21%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target MolTransforms
make  -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend.internal".
Scanning dependencies of target Subgraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.cpp
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
[ 21%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target SubstructMatch
make  -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend.internal".
Scanning dependencies of target PartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 22%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++ -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
make  -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend.internal".
Scanning dependencies of target rdMolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 22%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const PATH_TYPE&, bool, RDKit::INT_MAP_INT&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 22%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 22%] Built target Subgraphs
[ 22%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++ -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.cpp
[ 23%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::computeGasteigerCharges(const RDKit::ROMol&, std::vector<double>&, int, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend.internal".
Scanning dependencies of target ShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 23%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
[ 23%] Linking CXX shared library ../../../lib/libRDKitPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitPartialCharges.so.1 -o ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 23%] Built target PartialCharges
[ 23%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
make  -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend.internal".
Scanning dependencies of target MolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++ -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp
[ 24%] Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolTransforms.so CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o  ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Built target rdMolTransforms
[ 24%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'std::vector<double> RDKit::MolShapes::getConfDimensions(const RDKit::Conformer&, double, const RDGeom::Point3D*, bool)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 25%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2020.03.4 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2020.03.4 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Built target ShapeHelpers
make  -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend.internal".
Scanning dependencies of target MolInterchange
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolInterchange.dir/Parser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp
make  -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend.internal".
Scanning dependencies of target SLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp
[ 25%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++ -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
[ 25%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2020.03.4 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2020.03.4 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Built target MolCatalog
[ 25%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend.internal".
Scanning dependencies of target rdqueries
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdqueries.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp:35:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::SLNParse::finalizeQueryMol(RDKit::ROMol*, bool)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/10/bits/stl_vector.h: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolInterchange::{anonymous}::DocToMols(rapidjson::Document&, const RDKit::MolInterchange::JSONParseParameters&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolInterchange.dir/Writer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Writer.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdqueries.dir/Queries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Queries.cpp
[ 25%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:13:
/usr/include/c++/10/bits/stl_vector.h: In function 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smarts.tab.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp:37:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 26%] Linking CXX shared library ../../../lib/libRDKitMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolInterchange.so.1 -o ../../../lib/libRDKitMolInterchange.so.1.2020.03.4 CMakeFiles/MolInterchange.dir/Parser.cpp.o CMakeFiles/MolInterchange.dir/Writer.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInterchange.so.1.2020.03.4 ../../../lib/libRDKitMolInterchange.so.1 ../../../lib/libRDKitMolInterchange.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target MolInterchange
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smiles.tab.cpp
[ 27%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/sln.tab.cpp
In file included from /usr/include/c++/10/vector:72,
                 from smarts.yy:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend.internal".
Scanning dependencies of target rdtrajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Trajectory.cpp
In file included from /usr/include/c++/10/vector:72,
                 from smiles.yy:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 28%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdqueries.so CMakeFiles/rdqueries.dir/rdqueries.cpp.o CMakeFiles/rdqueries.dir/Queries.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target rdqueries
[ 28%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
make  -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend.internal".
Scanning dependencies of target rdChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
In file included from /usr/include/c++/10/vector:72,
                 from sln.yy:41:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 29%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/lex.yysln.cpp
[ 29%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
[ 30%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdTrajectory.cpp
[ 30%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2020.03.4 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2020.03.4 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target SLNParse
make  -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend.internal".
Scanning dependencies of target Optimizer
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++ -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from smiles.ll:25:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 30%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 30%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 30%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++ -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/LinearSearch.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target rdtrajectory
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend.internal".
Scanning dependencies of target rdPartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target SmilesParse
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend.internal".
Scanning dependencies of target rdShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp
[ 30%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../../lib/libRDKitChemicalFeatures.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target rdChemicalFeatures
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend.internal".
Scanning dependencies of target ReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
[ 30%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2020.03.4 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target Optimizer
make  -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend.internal".
Scanning dependencies of target rdMolInterchange
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolInterchange_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp
[ 32%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o  ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 32%] Built target rdPartialCharges
make  -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend.internal".
Scanning dependencies of target testSLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/test.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:13:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::tuple RDKit::getUnionOfTwoBox(boost::python::tuple, boost::python::tuple)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::list<int>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 33%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2020.03.4 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2020.03.4 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target ReducedGraphs
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend.internal".
Scanning dependencies of target rdSLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
[ 33%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o  ../../../../lib/libRDKitShapeHelpers.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 33%] Linking CXX shared module ../../../../rdkit/Chem/rdMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolInterchange.so CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o  ../../../../lib/libRDKitMolInterchange.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target rdShapeHelpers
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
[ 33%] Built target rdMolInterchange
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend.internal".
Scanning dependencies of target testOptimizer
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp
Scanning dependencies of target ForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/10/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 33%] Linking CXX executable testOptimizer
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/testOptimizer.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -o testOptimizer  ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target testOptimizer
[ 33%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In member function 'double ForceFields::ForceField::calcEnergy(std::vector<double>*) const':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In member function 'int ForceFields::ForceField::minimize(unsigned int, RDKit::SnapshotVect*, unsigned int, double, double)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend.internal".
Scanning dependencies of target graphmolSGroupCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp
[ 33%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o  ../../../../lib/libRDKitSLNParse.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target rdSLNParse
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_main.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolSGroupCatch.dir/catch_main.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_main.cpp
[ 35%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.cpp
[ 35%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 35%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.cpp
make  -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend.internal".
Scanning dependencies of target graphmolqueryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp
[ 35%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.cpp
[ 35%] Linking CXX executable testSLNParse
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSLNParse.dir/test.cpp.o -o testSLNParse  ../../../lib/libRDKitSLNParse.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target testSLNParse
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend.internal".
Scanning dependencies of target graphmolcpTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp
[ 36%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.cpp
[ 36%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_main.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_main.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 36%] Linking CXX executable graphmolcpTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -o graphmolcpTest  ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Built target graphmolcpTest
[ 36%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend.internal".
Scanning dependencies of target graphmolMemTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp
[ 37%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.cpp
[ 37%] Linking CXX executable graphmolqueryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -o graphmolqueryTest  ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target graphmolqueryTest
[ 37%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.cpp
make  -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/depend.internal".
Scanning dependencies of target test-valgrind
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Building CXX object Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test-valgrind.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 37%] Linking CXX executable graphmolMemTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -o graphmolMemTest1  ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target graphmolMemTest1
[ 37%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.cpp
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend.internal".
Scanning dependencies of target graphmolIterTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/itertest.cpp
[ 38%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.cpp
[ 39%] Linking CXX executable test-valgrind
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-valgrind.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -o test-valgrind  ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target test-valgrind
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend.internal".
Scanning dependencies of target ChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.cpp
[ 39%] Linking CXX executable graphmolIterTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -o graphmolIterTest  ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target graphmolIterTest
[ 39%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
[ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.cpp
[ 39%] Linking CXX executable graphmolSGroupCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolSGroupCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o CMakeFiles/graphmolSGroupCatch.dir/catch_main.cpp.o -o graphmolSGroupCatch  ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target graphmolSGroupCatch
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend.internal".
Scanning dependencies of target smaTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/smaTest1.dir/smatest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smatest.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::combineMols(const RDKit::ROMol&, const RDKit::ROMol&, RDGeom::Point3D)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::{anonymous}::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.cpp
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::replaceCore(const RDKit::ROMol&, const RDKit::ROMol&, const MatchVectType&, bool, bool, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::list<int>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.cpp
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.cpp
[ 41%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target ChemTransforms
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.cpp
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend.internal".
Scanning dependencies of target smiTest2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/smiTest2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test2.cpp
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend.internal".
Scanning dependencies of target FilterCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/Filters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/Filters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.cpp
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.cpp
[ 41%] Linking CXX executable smiTest2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTest2.dir/test2.cpp.o -o smiTest2  ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target smiTest2
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend.internal".
Scanning dependencies of target Fingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp
[ 41%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++ -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:20,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFPBCI&}; _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFPBCI>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFChg&}; _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFChg>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFBond&}; _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFBond>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFHerschbachLaurie&}; _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFHerschbachLaurie>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFCovRadPauEle&}; _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFCovRadPauEle>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFAngle&}; _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFAngle>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFStbn&}; _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFStbn>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFOop&}; _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFOop>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFTor&}; _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFTor>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFVdW&}; _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFVdW>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function 'RDKit::SparseIntVect<long long unsigned int>* RDKit::getUnfoldedRDKFingerprintMol(const RDKit::ROMol&, unsigned int, unsigned int, bool, bool, bool, std::vector<unsigned int>*, const std::vector<unsigned int>*, std::vector<std::vector<long long unsigned int> >*, std::map<long long unsigned int, std::vector<std::vector<int> > >*)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:20,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFVdWCollection::MMFFVdWCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFOopCollection::MMFFOopCollection(bool, std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:820:1: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  820 | }
      | ^
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFChgCollection::MMFFChgCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBondCollection::MMFFBondCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBndkCollection::MMFFBndkCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFHerschbachLaurieCollection::MMFFHerschbachLaurieCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFStbnCollection::MMFFStbnCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFAngleCollection::MMFFAngleCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFCovRadPauEleCollection::MMFFCovRadPauEleCollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFTorCollection::MMFFTorCollection(bool, std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFPBCICollection::MMFFPBCICollection(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 42%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2020.03.4 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o  ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target ForceField
[ 43%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
[ 43%] Linking CXX executable smaTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smaTest1.dir/smatest.cpp.o -o smaTest1  ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Built target smaTest1
[ 43%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp:32:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend.internal".
Scanning dependencies of target testSubgraphs2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSubgraphs2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test2.cpp
[ 45%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
In file included from /usr/include/c++/10/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long int&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, int> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/10/bits/stl_map.h: In function 'RDKit::SparseIntVect<long long int>* RDKit::AtomPairs::getTopologicalTorsionFingerprint(const RDKit::ROMol&, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::AtomPairs::{anonymous}::TorsionFpCalc(T*, const RDKit::ROMol&, unsigned int, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) [with T = RDKit::SparseIntVect<long long int>]':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend.internal".
Scanning dependencies of target testSubgraphs1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSubgraphs1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test1.cpp
[ 45%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.cpp
[ 45%] Linking CXX executable testSubgraphs2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs2.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubgraphs2.dir/test2.cpp.o -o testSubgraphs2  ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Built target testSubgraphs2
make  -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend.internal".
Scanning dependencies of target FragCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp:32:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = const std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 45%] Linking CXX executable testSubgraphs1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubgraphs1.dir/test1.cpp.o -o testSubgraphs1  ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Built target testSubgraphs1
[ 45%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MHFP.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MHFP.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp:183: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  183 |   #pragma omp parallel for
      | 
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp:212: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  212 |   #pragma omp parallel for
      | 
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp:242: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  242 |   #pragma omp parallel for
      | 
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp:272: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas]
  272 |   #pragma omp parallel for
      | 
[ 45%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp: In member function 'std::vector<std::__cxx11::basic_string<char> > RDKit::MHFPFingerprints::MHFPEncoder::CreateShingling(const RDKit::ROMol&, unsigned char, bool, bool, bool, unsigned char)':
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.cpp:129:13: warning: unused variable 'atom' [-Wunused-variable]
  129 |   for (auto atom : mol.atoms()) {
      |             ^~~~
[ 45%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
[ 45%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogRunner.cpp
[ 45%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:10:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:10:
/usr/include/c++/10/bits/stl_map.h: In function 'unsigned int RDKit::addOrder1Paths(RDKit::PATH_LIST&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:10:
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
[ 45%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/10/bits/stl_map.h: In member function 'RDKit::SparseIntVect<IndexType>* RDKit::FingerprintGenerator<OutputType>::getFingerprintHelper(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, uint64_t) const [with OutputType = long long unsigned int]':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
[ 45%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'OutputType RDKit::AtomPair::AtomPairAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'OutputType RDKit::AtomPair::AtomPairAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 45%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp
[ 45%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
[ 46%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
[ 46%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
make  -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend.internal".
Scanning dependencies of target testPartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 47%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/test1.cpp
In file included from /usr/include/c++/10/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:10:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:10:
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const FragCatalog&, const MatchVectType&, ExplicitBitVect*)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
[ 47%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
[ 48%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2020.03.4 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2020.03.4 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target FragCatalog
[ 48%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 48%] Linking CXX executable testPartialCharges
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testPartialCharges.dir/test1.cpp.o -o testPartialCharges  ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target testPartialCharges
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend.internal".
Scanning dependencies of target MolChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
[ 48%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target FilterCatalog
[ 48%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend.internal".
Scanning dependencies of target testReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/test1.cpp
make  -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend.internal".
Scanning dependencies of target rdReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
[ 48%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
[ 48%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2020.03.4 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/MHFP.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target Fingerprints
[ 48%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
[ 48%] Linking CXX executable testReducedGraphs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReducedGraphs.dir/test1.cpp.o -o testReducedGraphs  ../../../lib/libRDKitReducedGraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target testReducedGraphs
make  -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend.internal".
Scanning dependencies of target rdchem
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdchem.cpp
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/Table.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Table.cpp
[ 49%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o  ../../../../lib/libRDKitReducedGraphs.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Built target rdReducedGraphs
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend.internal".
Scanning dependencies of target ForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
[ 50%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2020.03.4 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2020.03.4 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 50%] Built target MolChemicalFeatures
[ 50%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
In file included from /usr/include/c++/10/memory:66,
                 from /usr/include/boost/function/function_base.hpp:16,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Table.cpp:13:
/usr/include/c++/10/bits/stl_uninitialized.h: In static member function 'static _ForwardIterator std::__uninitialized_copy<_TrivialValueTypes>::__uninit_copy(_InputIterator, _InputIterator, _ForwardIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >; _ForwardIterator = RDKit::atomicData*; bool _TrivialValueTypes = false]':
/usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
   84 |         __uninit_copy(_InputIterator __first, _InputIterator __last,
      |         ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_uninitialized.h:84:9: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_uninitialized.h: In static member function 'static PyObject* boost::python::converter::as_to_python_function<T, ToPython>::convert(const void*) [with T = RDKit::PeriodicTable; ToPython = boost::python::objects::class_cref_wrapper<RDKit::PeriodicTable, boost::python::objects::make_instance<RDKit::PeriodicTable, boost::python::objects::value_holder<RDKit::PeriodicTable> > >]':
/usr/include/c++/10/bits/stl_uninitialized.h:150:15: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
  147 |       return std::__uninitialized_copy<__is_trivial(_ValueType1)
      |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |            && __is_trivial(_ValueType2)
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |            && __assignable>::
      |            ~~~~~~~~~~~~~~~~~~
  150 |  __uninit_copy(__first, __last, __result);
      |  ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp
[ 50%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
[ 50%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++ -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/depend.internal".
Scanning dependencies of target rdMHFPFingerprint
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMHFPFingerprint_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/MHFPWrapper.cpp
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend.internal".
Scanning dependencies of target rdFingerprintGenerator
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h:13,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In constructor 'ForceFields::CrystalFF::ExpTorsionAngleCollection::ExpTorsionAngleCollection(const string&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 51%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target ForceFieldHelpers
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend.internal".
Scanning dependencies of target rdMolChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
[ 51%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Linking CXX shared module ../../../../rdkit/Chem/rdMHFPFingerprint.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMHFPFingerprint.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMHFPFingerprint.so CMakeFiles/rdMHFPFingerprint.dir/MHFPWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 52%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFingerprintGenerator.so CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target rdFingerprintGenerator
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
[ 52%] Built target rdMHFPFingerprint
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend.internal".
[ 52%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
Scanning dependencies of target SubstructLibrary
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp
[ 52%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
[ 53%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o  ../../../../lib/libRDKitMolChemicalFeatures.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 53%] Built target rdMolChemicalFeatures
make  -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend.internal".
Scanning dependencies of target MolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 53%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  171 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::objects::make_holder<1>::apply<Holder, ArgList>::execute(PyObject*, boost::python::objects::make_holder<1>::apply<Holder, ArgList>::t0) [with Holder = boost::python::objects::pointer_holder<boost::shared_ptr<RDKit::Conformer>, RDKit::Conformer>; ArgList = boost::mpl::vector1<unsigned int>]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::SetAtomPos(RDKit::Conformer*, unsigned int, boost::python::api::object)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::MolClearComputedProps(const RDOb&) [with RDOb = RDKit::Conformer]':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::MolClearProp(const RDOb&, const char*) [with RDOb = RDKit::Conformer]':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/depend.internal".
Scanning dependencies of target DistGeometry
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 53%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.cpp
[ 53%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/PatternFactory.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::MolAlign::alignMolConformers(RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const DoubleVector*, bool, unsigned int, std::vector<double>*)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
[ 53%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp: In constructor 'RDKit::MolAlign::O3A::O3A(int (*)(unsigned int, unsigned int, double, void*), double (*)(unsigned int, unsigned int, void*), double (*)(unsigned int, unsigned int, void*), void*, RDKit::ROMol&, const RDKit::ROMol&, int, int, const boost::dynamic_bitset<>&, const boost::dynamic_bitset<>&, bool, unsigned int, unsigned int, RDKit::MolAlign::O3AConstraintVect*, RDKit::ROMol*, RDKit::MolAlign::LAP*, RDKit::MolAlign::MolHistogram*, RDKit::MolAlign::MolHistogram*)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp:1245:16: warning: unused variable 'refNAtoms' [-Wunused-variable]
 1245 |   unsigned int refNAtoms = refMol.getNumAtoms();
      |                ^~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp:1246:16: warning: unused variable 'prbNAtoms' [-Wunused-variable]
 1246 |   unsigned int prbNAtoms = prbMol.getNumAtoms();
      |                ^~~~~~~~~
[ 54%] Linking CXX shared library ../../../lib/libRDKitSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2020.03.4 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o CMakeFiles/SubstructLibrary.dir/PatternFactory.cpp.o  ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2020.03.4 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 54%] Built target SubstructLibrary
[ 54%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/RingInfo.cpp
[ 55%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.cpp
[ 55%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.cpp
[ 56%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/EditableMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/EditableMol.cpp
[ 56%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2020.03.4 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o  ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target DistGeometry
[ 56%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MonomerInfo.cpp
[ 56%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolAlign.so.1 -o ../../../lib/libRDKitMolAlign.so.1.2020.03.4 CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target MolAlign
[ 56%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
[ 56%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/MolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolBundle.cpp
make  -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend.internal".
Scanning dependencies of target rdForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/depend.internal".
Scanning dependencies of target testDistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++ -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/testDistGeom.cpp
[ 57%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/StereoGroup.cpp
make  -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend.internal".
Scanning dependencies of target DistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/c++ -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/Wrap/DistGeom.cpp
[ 58%] Linking CXX executable testDistGeom
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -o testDistGeom  ../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testDistGeom
make  -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend.internal".
Scanning dependencies of target rdForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
[ 58%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp: In member function 'double ForceFields::PyForceField::calcEnergyWithPos(const boost::python::api::object&)':
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:136:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  136 |       c[i] = python::extract<double>(pos[i]);
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp: In member function 'PyObject* ForceFields::PyForceField::calcGradWithPos(const boost::python::api::object&)':
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:172:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |       c[i] = python::extract<double>(pos[i]);
[ 59%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target DistGeom
make  -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend.internal".
Scanning dependencies of target Depictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp: In function 'void RDKit::{anonymous}::addBracketHelper(RDKit::SubstanceGroup&, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:56:16: warning: unused variable 'i' [-Wunused-variable]
   56 |   unsigned int i = 0;
      |                ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:12:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDDepict::copyCoordinate(RDKit::ROMol&, std::__cxx11::list<RDDepict::EmbeddedFrag>&, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o  ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const INT_POINT2D_MAP*, bool, bool, unsigned int, unsigned int, int, bool, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target rdForceFieldHelpers
make  -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend.internal".
Scanning dependencies of target rdCoordGen
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCoordGen_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp
[ 59%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o  ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target rdForceField
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend.internal".
Scanning dependencies of target DistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp
[ 59%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:710:40: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  710 |   EmbeddedAtom refAtom = d_eatoms[toAid];
      |                                        ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithNoAng(unsigned int, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:781:40: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  781 |   EmbeddedAtom refAtom = d_eatoms[toAid];
      |                                        ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp: In function 'bool RDKit::DGeomHelpers::_checkMacrocycleAmideEster14(const RDKit::ROMol&, const RDKit::Bond*, const RDKit::Bond*, const RDKit::Atom*, const RDKit::Atom*, const RDKit::Atom*, const RDKit::Atom*)':
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:834:16: warning: unused variable 'a1Num' [-Wunused-variable]
  834 |   unsigned int a1Num = atm1->getAtomicNum();
      |                ^~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:837:16: warning: unused variable 'a4Num' [-Wunused-variable]
  837 |   unsigned int a4Num = atm4->getAtomicNum();
      |                ^~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:827:65: warning: unused parameter 'bnd1' [-Wunused-parameter]
  827 | bool _checkMacrocycleAmideEster14(const ROMol &mol, const Bond *bnd1,
      |                                                     ~~~~~~~~~~~~^~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:828:47: warning: unused parameter 'bnd3' [-Wunused-parameter]
  828 |                                   const Bond *bnd3, const Atom *atm1,
      |                                   ~~~~~~~~~~~~^~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:10:
/<<PKGBUILDDIR>>/Code/GraphMol/Bond.h:121:63: warning: 'resbnd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  121 |   BondType getBondType() const { return static_cast<BondType>(d_bondType); };
      |                                                               ^~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:863:21: note: 'resbnd' was declared here
  863 |         const Bond *resbnd;
      |                     ^~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:10:
/<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:116:37: warning: 'res' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |   int getAtomicNum() const { return d_atomicNum; };
      |                                     ^~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:862:21: note: 'res' was declared here
  862 |         const Atom *res;
      |                     ^~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:10:
/<<PKGBUILDDIR>>/Code/GraphMol/Bond.h:121:63: warning: 'resbnd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  121 |   BondType getBondType() const { return static_cast<BondType>(d_bondType); };
      |                                                               ^~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:846:21: note: 'resbnd' was declared here
  846 |         const Bond *resbnd;
      |                     ^~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:10:
/<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:116:37: warning: 'res' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |   int getAtomicNum() const { return d_atomicNum; };
      |                                     ^~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:845:21: note: 'res' was declared here
  845 |         const Atom *res;
      |                     ^~~
[ 59%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o CMakeFiles/rdchem.dir/StereoGroup.cpp.o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/10/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
 2193 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<unsigned int&&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/10/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::initFromRingCoords(const INT_VECT&, const INT_POINT2D_MAP&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::flipAboutBond(unsigned int, bool)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const INT_VECT&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::Bond*)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/10/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeTwoAtomTrans(unsigned int, unsigned int, const INT_POINT2D_MAP&)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target rdchem
[ 59%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const INT_VECT&)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::openAngles(const double*, unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(unsigned int, const RDKit::ROMol*)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::ROMol*, const INT_POINT2D_MAP&)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithNoAng(unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addNonRingAtom(unsigned int, unsigned int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'void RDKit::{anonymous}::SetCoordMap(RDKit::CoordGen::CoordGenParams*, boost::python::dict&)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:293:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |     x = other.x;
      |         ~~~~~~^
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 59%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeFragsWithComm(std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::randomSampleFlipsAndPermutations(unsigned int, unsigned int, int, const DOUBLE_SMART_PTR*, double, bool)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
[ 59%] Linking CXX shared module ../../../rdkit/Chem/rdCoordGen.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCoordGen.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdCoordGen.so CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o  -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lpython3.9 -lboost_python39 -lboost_serialization 
/usr/include/c++/10/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target rdCoordGen
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDDepict::INT_PAIR_VECT RDDepict::findBondsPairsToPermuteDeg4(const RDGeom::Point2D&, const INT_VECT&, const VECT_C_POINT&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 59%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDepictor.so.1 -o ../../../lib/libRDKitDepictor.so.1.2020.03.4 CMakeFiles/Depictor.dir/RDDepictor.cpp.o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o CMakeFiles/Depictor.dir/DepictUtils.cpp.o  ../../../lib/libRDKitMolAlign.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1 ../../../lib/libRDKitDepictor.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target Depictor
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend.internal".
Scanning dependencies of target FileParsers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::DGeomHelpers::detail::embedHelper_(int, int, RDKit::DGeomHelpers::detail::EmbedArgs*, const RDKit::DGeomHelpers::EmbedParameters*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::DGeomHelpers::EmbedMultipleConfs(RDKit::ROMol&, RDKit::INT_VECT&, unsigned int, const RDKit::DGeomHelpers::EmbedParameters&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target DistGeomHelpers
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'std::vector<T> RDKit::SGroupParsing::ParseV3000Array(std::stringstream&) [with T = double]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::Mol2DataStreamToMol(std::istream*, bool, bool, RDKit::Mol2Type, bool)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SAPLines(int, const RDKit::SubstanceGroup&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 11 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-2147483647, 2147483647]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 13 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000STYLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SBTLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SDSLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000StringPropLines(unsigned int, const RDKit::ROMol&, const string&, const string&, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SNCLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SLBLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SPLLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/10/cstdio:42,
                 from /usr/include/c++/10/ext/string_conversions.h:43,
                 from /usr/include/c++/10/bits/basic_string.h:6545,
                 from /usr/include/c++/10/string:55,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
                 from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Distance = int; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  223 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_algo.h:1819:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1819 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDGeom::Point3D>}; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Alloc = std::allocator<std::pair<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, RDGeom::Point3D> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__heap_select(_RandomAccessIterator, _RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1662 |     __heap_select(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1662:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1945 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1959 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1937:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1937 |       std::__heap_select(__first, __middle, __last, __comp);
      |       ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'bool RDKit::FileParserUtils::ParseV2000CTAB(std::istream*, unsigned int&, RDKit::RWMol*, RDKit::Conformer*&, bool&, unsigned int&, unsigned int&, bool)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'unsigned int RDKit::SDMolSupplier::length()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual RDKit::ROMol* RDKit::SDMolSupplier::next()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::SDMolSupplier::moveTo(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDWriter.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::GetMolFileAtomProperties(const RDKit::Atom*, const RDKit::Conformer*, int&, int&, unsigned int&, double&, double&, double&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1974 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1975 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1976 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1886 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1891 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::{anonymous}::ParseV3000AtomBlock(std::istream*, unsigned int&, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesWriter.cpp
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTWriter.cpp
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileWriter.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::TDTParseUtils::ParseNumberList(std::string, std::vector<T>&, std::istream*) [with T = double]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In member function 'RDKit::ROMol* RDKit::TDTMolSupplier::parseMol(std::string)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBWriter.cpp
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBSupplier.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::Conformer* RDKit::ParseConfData(std::istream*, unsigned int&, RDKit::RWMol*, unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::ParseTPLAtomLine(std::string, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileWriter.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::PDBConformerLine(RDKit::RWMol*, const char*, unsigned int, RDKit::Conformer*&, int&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::PDBAtomLine(RDKit::RWMol*, const char*, unsigned int, unsigned int, std::map<int, RDKit::Atom*>&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.cpp
[ 63%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp
[ 63%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.cpp
[ 63%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::{anonymous}::addAtoms(const schrodinger::mae::IndexedBlock&, RDKit::RWMol&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/10/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 63%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2020.03.4 CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o  ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Built target FileParsers
make  -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make  -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make  -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make  -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/depend.internal".
Scanning dependencies of target testCoordGen
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend.internal".
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend.internal".
[ 64%] Building CXX object External/CoordGen/CMakeFiles/testCoordGen.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testCoordGen.dir/test.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/test.cpp
Scanning dependencies of target testMMFFForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
Scanning dependencies of target testUFFForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target graphmolTestsCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/testUFFForceField.cpp
[ 64%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp: In function 'void ____C_A_T_C_H____T_E_S_T____45()':
/<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:358:14: warning: unused variable 'm' [-Wunused-variable]
  358 |         auto m = SmilesToMol(pr.first);
      |              ^
/<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:371:14: warning: unused variable 'm' [-Wunused-variable]
  371 |         auto m = SmilesToMol(pr.first);
      |              ^
/<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:384:14: warning: unused variable 'm' [-Wunused-variable]
  384 |         auto m = SmilesToMol(pr.first);
      |              ^
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::RWMol]':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void testMMFFTorsionConstraints()':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable testUFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -o testUFFForceField  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 64%] Linking CXX executable testCoordGen
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoordGen.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testCoordGen.dir/test.cpp.o -o testCoordGen  -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testUFFForceField
make  -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend.internal".
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target graphmolTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testCoordGen
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_main.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolTestsCatch.dir/catch_main.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_main.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_graphmol.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In function 'void ____C_A_T_C_H____T_E_S_T____35()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable testMMFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceField.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -o testMMFFForceField  ../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testMMFFForceField
make  -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/depend.internal".
Scanning dependencies of target hanoiTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  171 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/depend.internal".
Scanning dependencies of target testSGroup
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSGroup.dir/testSGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::RDProps::clearComputedProps() const':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_main.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_main.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable graphmolTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolTest1.dir/test1.cpp.o -o graphmolTest1  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target graphmolTest1
make  -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend.internal".
Scanning dependencies of target graphmoltestPicklerGlobalSetting
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp
[ 64%] Linking CXX executable hanoiTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -o hanoiTest  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target hanoiTest
make  -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend.internal".
Scanning dependencies of target graphmolMolOpsTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void testGlobalPickleProps()':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable testSGroup
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSGroup.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSGroup.dir/testSGroup.cpp.o -o testSGroup  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testSGroup
make  -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend.internal".
Scanning dependencies of target graphmoltestChirality
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp
[ 64%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -o graphmoltestPicklerGlobalSetting  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target graphmoltestPicklerGlobalSetting
make  -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend.internal".
Scanning dependencies of target graphmoltestPickler
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp
[ 65%] Linking CXX executable graphmolTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolTestsCatch.dir/catch_graphmol.cpp.o CMakeFiles/graphmolTestsCatch.dir/catch_main.cpp.o -o graphmolTestsCatch  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target graphmolTestsCatch
make  -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/depend.internal".
Scanning dependencies of target molBundleTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testMolBundle.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testIssue219()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testGithubIssue2510()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable molBundleTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -o molBundleTest  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target molBundleTest
make  -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend.internal".
Scanning dependencies of target resMolSupplierTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/resMolSupplierTest.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testGithub2441()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In function 'void testPickleProps()':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testAddConformers()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testGithubIssue678()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testIssue212()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testAddHsCoords()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 65%] Linking CXX executable resMolSupplierTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -o resMolSupplierTest  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target resMolSupplierTest
make  -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend.internal".
Scanning dependencies of target testDepictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++ -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp
[ 65%] Linking CXX executable graphmoltestPickler
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -o graphmoltestPickler  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target graphmoltestPickler
make  -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend.internal".
Scanning dependencies of target rdDepictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/c++ -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
[ 65%] Linking CXX executable graphmoltestChirality
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -o graphmoltestChirality  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target graphmoltestChirality
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend.internal".
Scanning dependencies of target cxsmilesTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:18:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
In file included from /usr/include/c++/10/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/10/bits/stl_map.h: In function 'void testIssue3122141()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void testIssue2091304()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void testIssue2303566()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void testIssue3135833()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void test4()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 67%] Linking CXX executable testDepictor
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDepictor.dir/testDepictor.cpp.o -o testDepictor  ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testDepictor
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend.internal".
Scanning dependencies of target smiTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'unsigned int RDDepict::Compute2DCoords(RDKit::ROMol&, bool, bool, boost::python::dict&, unsigned int, unsigned int, int, bool, double, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:293:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |     x = other.x;
      |         ~~~~~~^
[ 68%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o  ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target rdDepictor
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend.internal".
Scanning dependencies of target smiTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/smiTest1.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp
[ 68%] Linking CXX executable cxsmilesTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -o cxsmilesTest  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target cxsmilesTest
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend.internal".
Scanning dependencies of target testMol2ToMol
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMol2ToMol.cpp
[ 68%] Linking CXX executable testMol2ToMol
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -o testMol2ToMol  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMol2ToMol
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend.internal".
Scanning dependencies of target fileParsersTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp
[ 68%] Linking CXX executable graphmolMolOpsTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -o graphmolMolOpsTest  ../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../lib/libRDKitDepictor.so.1.2020.03.4 ../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../lib/libRDKitAlignment.so.1.2020.03.4 ../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../lib/libRDKitForceField.so.1.2020.03.4 ../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target graphmolMolOpsTest
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend.internal".
Scanning dependencies of target testPropertyLists
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/catch_main.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testPropertyLists.dir/catch_main.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_main.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testIssue2963522()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Atom::setAtomMapNum(int, bool)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable smiTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTest1.dir/test.cpp.o -o smiTest1  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target smiTest1
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend.internal".
Scanning dependencies of target testMolSupplier
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_main.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_main.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp: In function 'void testGitHub2881()':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:2789:21: warning: catching polymorphic type 'class Invar::Invariant' by value [-Wcatch-value=]
 2789 |     } catch (Invar::Invariant) {
      |                     ^~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testSetStreamIndices()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<int>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable fileParsersTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fileParsersTest1.dir/test1.cpp.o -o fileParsersTest1  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target fileParsersTest1
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend.internal".
Scanning dependencies of target testMolWriter
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable testPropertyLists
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPropertyLists.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o CMakeFiles/testPropertyLists.dir/catch_main.cpp.o -o testPropertyLists  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 68%] Linking CXX executable testMolSupplier
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -o testMolSupplier  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitRDStreams.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMolSupplier
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend.internal".
Scanning dependencies of target testTplParser
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testTpls.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testPropertyLists
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend.internal".
Scanning dependencies of target testSequence
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testSequence.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testIssue265()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable testSequence
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSequence.dir/testSequence.cpp.o -o testSequence  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testSequence
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend.internal".
Scanning dependencies of target testExtendedStereoParsing
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
[ 68%] Linking CXX executable testMolWriter
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -o testMolWriter  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMolWriter
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend.internal".
Scanning dependencies of target fileParsersCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp
[ 68%] Linking CXX executable testTplParser
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testTplParser.dir/testTpls.cpp.o -o testTplParser  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testTplParser
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/catch_main.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++ -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/fileParsersCatchTest.dir/catch_main.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_main.cpp
[ 68%] Linking CXX executable testExtendedStereoParsing
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -o testExtendedStereoParsing  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testExtendedStereoParsing
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend.internal".
Scanning dependencies of target substructTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp: In function 'bool {anonymous}::no_match(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:137:28: warning: unused parameter 'mol' [-Wunused-parameter]
  137 | bool no_match(const ROMol &mol, const std::vector<unsigned int> &ids) {
      |               ~~~~~~~~~~~~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:137:66: warning: unused parameter 'ids' [-Wunused-parameter]
  137 | bool no_match(const ROMol &mol, const std::vector<unsigned int> &ids) {
      |                                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp: In function 'bool {anonymous}::always_match(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:140:32: warning: unused parameter 'mol' [-Wunused-parameter]
  140 | bool always_match(const ROMol &mol, const std::vector<unsigned int> &ids) {
      |                   ~~~~~~~~~~~~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:140:70: warning: unused parameter 'ids' [-Wunused-parameter]
  140 | bool always_match(const ROMol &mol, const std::vector<unsigned int> &ids) {
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp: In function 'bool {anonymous}::bigger(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:143:26: warning: unused parameter 'mol' [-Wunused-parameter]
  143 | bool bigger(const ROMol &mol, const std::vector<unsigned int> &ids) {
      |             ~~~~~~~~~~~~~^~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/file_parsers_catch.cpp:11:
/usr/include/c++/10/bits/stl_vector.h: In function 'void ____C_A_T_C_H____T_E_S_T____38()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend.internal".
Scanning dependencies of target testSubstructMatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testSubstructMatch.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_main.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_main.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 68%] Linking CXX executable smiTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -o smiTestCatch  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target smiTestCatch
make  -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend.internal".
Scanning dependencies of target Descriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Descriptors::CrippenParams&}; _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Descriptors::CrippenParams>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Descriptors::CrippenParamCollection::CrippenParamCollection(const string&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp:17:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/BCUT.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/BCUT.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.cpp
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.cpp
[ 69%] Linking CXX executable testSubstructMatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubstructMatch.dir/test1.cpp.o -o testSubstructMatch  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target testSubstructMatch
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend.internal".
Scanning dependencies of target chemTransformsTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
[ 69%] Linking CXX executable fileParsersCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fileParsersCatchTest.dir/file_parsers_catch.cpp.o CMakeFiles/fileParsersCatchTest.dir/catch_main.cpp.o -o fileParsersCatchTest  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target fileParsersCatchTest
[ 69%] Linking CXX executable substructTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -o substructTestCatch  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target substructTestCatch
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.cpp
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend.internal".
Scanning dependencies of target testChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++ -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 70%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp:32:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = double]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<double> RDKit::Descriptors::Properties::computeProperties(const RDKit::ROMol&, bool) const':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend.internal".
Scanning dependencies of target filterCatalogTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
[ 71%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.cpp
[ 71%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.cpp
[ 71%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 71%] Linking CXX executable filterCatalogTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -o filterCatalogTest  ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target filterCatalogTest
make  -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend.internal".
Scanning dependencies of target rdfiltercatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
[ 72%] Linking CXX executable testChemTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -o testChemTransforms  ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testChemTransforms
[ 72%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
[ 72%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AtomFeat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/Descriptors.dir/AtomFeat.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.cpp
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend.internal".
Scanning dependencies of target testFragCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/test1.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.cpp: In function 'void RDKit::Descriptors::{anonymous}::AtomFeatVector(const RDKit::Atom*, const RDKit::ROMol*, std::vector<double>&, bool)':
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.cpp:110:29: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  110 |           feats[indx] = (IV == i ? 1 : 0);
      |                          ~~~^~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.cpp:135:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  135 |           feats[indx] = (toth == i ? 1 : 0);
      |                          ~~~~~^~~~
[ 72%] Linking CXX executable chemTransformsTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemTransformsTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -o chemTransformsTestCatch  ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target chemTransformsTestCatch
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend.internal".
Scanning dependencies of target rdfragcatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
[ 72%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDescriptors.so.1 -o ../../../lib/libRDKitDescriptors.so.1.2020.03.4 CMakeFiles/Descriptors.dir/Crippen.cpp.o CMakeFiles/Descriptors.dir/BCUT.cpp.o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o CMakeFiles/Descriptors.dir/MolSurf.cpp.o CMakeFiles/Descriptors.dir/Lipinski.cpp.o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o CMakeFiles/Descriptors.dir/MQN.cpp.o CMakeFiles/Descriptors.dir/Property.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o CMakeFiles/Descriptors.dir/AtomFeat.cpp.o  ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target Descriptors
[ 72%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend.internal".
Scanning dependencies of target fpTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp
[ 72%] Linking CXX executable testFragCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFragCatalog.dir/test1.cpp.o -o testFragCatalog  ../../../lib/libRDKitFragCatalog.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testFragCatalog
[ 72%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'RDKit::DOUBLE_VECT RDKit::GetBitDiscrims(const FragCatalog*, unsigned int)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 73%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend.internal".
Scanning dependencies of target testFingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:13:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 73%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp:31:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 73%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o  ../../../../lib/libRDKitFragCatalog.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target rdfragcatalog
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend.internal".
Scanning dependencies of target testFingerprintGenerators
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 74%] Linking CXX executable testFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFingerprints.dir/test1.cpp.o -o testFingerprints  ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Built target testFingerprints
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/depend.internal".
Scanning dependencies of target testMHFPFingerprint
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testMHFPFingerprint.cpp
In file included from /usr/include/c++/10/bits/char_traits.h:39,
                 from /usr/include/c++/10/string:40,
                 from /usr/include/c++/10/bits/locale_classes.h:40,
                 from /usr/include/c++/10/bits/ios_base.h:41,
                 from /usr/include/c++/10/streambuf:41,
                 from /usr/include/c++/10/bits/streambuf_iterator.h:35,
                 from /usr/include/c++/10/iterator:66,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/iterator_range_core.hpp:26,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:11:
/usr/include/c++/10/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1921 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algobase.h: In function 'void testAtomPairOutput()':
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 74%] Linking CXX executable testMHFPFingerprint
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMHFPFingerprint.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMHFPFingerprint.dir/testMHFPFingerprint.cpp.o -o testMHFPFingerprint  ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Built target testMHFPFingerprint
make  -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend.internal".
Scanning dependencies of target testMolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void test1Canonicalization()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Linking CXX executable testMolTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolTransforms.dir/test1.cpp.o -o testMolTransforms  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target testMolTransforms
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend.internal".
Scanning dependencies of target testMMFFForceFieldHelpersMultiThread
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMultiThread.cpp
In file included from /usr/include/c++/10/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/10/bits/stl_map.h: In function 'void testRDKitFP()':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h: In function 'void testTopologicalTorsionFPOld()':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
[ 75%] Linking CXX executable testFingerprintGenerators
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -o testFingerprintGenerators  ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target testFingerprintGenerators
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend.internal".
Scanning dependencies of target testMMFFForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
[ 75%] Linking CXX executable testMMFFForceFieldHelpersMultiThread
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -o testMMFFForceFieldHelpersMultiThread  ../../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target testMMFFForceFieldHelpersMultiThread
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend.internal".
Scanning dependencies of target testUFFForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX executable testMMFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -o testMMFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target testMMFFForceFieldHelpers
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend.internal".
Scanning dependencies of target testCrystalForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
[ 76%] Linking CXX executable testUFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -o testUFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target testUFFForceFieldHelpers
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend.internal".
Scanning dependencies of target testDistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++ -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
[ 76%] Linking CXX executable testCrystalForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -o testCrystalForceField  ../../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target testCrystalForceField
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend.internal".
Scanning dependencies of target rdDistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/c++ -DBOOST_PYTHON_MAX_ARITY=32 -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/10/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void testGithub2246()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void testConstrainedEmbedding()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void testGithub55()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testTemp()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'RDKit::INT_VECT RDKit::EmbedMultipleConfs(RDKit::ROMol&, unsigned int, unsigned int, int, bool, bool, double, bool, unsigned int, double, boost::python::dict&, double, bool, bool, int, bool, bool, bool, bool, bool, unsigned int)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'int RDKit::EmbedMolecule(RDKit::ROMol&, unsigned int, int, bool, bool, double, bool, unsigned int, boost::python::dict&, double, bool, bool, bool, bool, bool, bool, bool, unsigned int)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 77%] Linking CXX executable testDistGeomHelpers
[ 77%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o  ../../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -o testDistGeomHelpers  ../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target rdDistGeom
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
[ 77%] Built target testDistGeomHelpers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend.internal".
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend.internal".
Scanning dependencies of target testMolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
Scanning dependencies of target rdMolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
[ 77%] Linking CXX executable fpTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -o fpTestCatch  ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target fpTestCatch
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend.internal".
Scanning dependencies of target testFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'RDKit::MolAlign::PyO3A* RDKit::MolAlign::getCrippenO3A(RDKit::ROMol&, RDKit::ROMol&, boost::python::list, boost::python::list, int, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:461:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  461 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:476:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  476 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'boost::python::tuple RDKit::MolAlign::getCrippenO3AForConfs(RDKit::ROMol&, RDKit::ROMol&, int, boost::python::list, boost::python::list, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:542:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  542 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:557:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  557 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void test6()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void testGithub2077()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:24:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable testFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFeatures.dir/testFeatures.cpp.o -o testFeatures  ../../../lib/libRDKitMolChemicalFeatures.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target testFeatures
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend.internal".
Scanning dependencies of target testShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
[ 78%] Linking CXX executable testMolAlign
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -o testMolAlign  ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDistGeomHelpers.so.1.2020.03.4 ../../../lib/libRDKitDistGeometry.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target testMolAlign
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend.internal".
Scanning dependencies of target testMolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/test1.cpp
[ 79%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target rdMolAlign
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend.internal".
Scanning dependencies of target rdMolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolCatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp
[ 80%] Linking CXX executable testShapeHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -o testShapeHelpers  ../../../lib/libRDKitShapeHelpers.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target testShapeHelpers
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend.internal".
Scanning dependencies of target FMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.cpp
[ 80%] Linking CXX executable testMolCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolCatalog.dir/test1.cpp.o -o testMolCatalog  ../../../lib/libRDKitMolCatalog.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target testMolCatalog
[ 80%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FMCS.dir/Seed.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.cpp
[ 80%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o  ../../../../lib/libRDKitMolCatalog.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target rdMolCatalog
make  -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend.internal".
Scanning dependencies of target MolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/MolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolHash.dir/MolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.cpp
[ 82%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
[ 82%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
[ 82%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/HashToString.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolHash.dir/HashToString.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/HashToString.cpp
[ 82%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/hashfunctions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolHash.dir/hashfunctions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/hashfunctions.cpp
[ 82%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolHash.dir/normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp
[ 82%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2020.03.4 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target FMCS
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend.internal".
Scanning dependencies of target MMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++ -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend.internal".
Scanning dependencies of target trajectoryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp
[ 82%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2020.03.4 CMakeFiles/MolHash.dir/MolHash.cpp.o CMakeFiles/MolHash.dir/HashToString.cpp.o CMakeFiles/MolHash.dir/hashfunctions.cpp.o CMakeFiles/MolHash.dir/normalize.cpp.o  ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2020.03.4 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target MolHash
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend.internal".
[ 82%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
Scanning dependencies of target substructLibraryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o  ../../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target rdfiltercatalog
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend.internal".
Scanning dependencies of target rdSubstructLibrary
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 82%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 83%] Linking CXX executable trajectoryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -o trajectoryTest  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 83%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2020.03.4 CMakeFiles/MMPA.dir/MMPA.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Built target trajectoryTest
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend.internal".
Scanning dependencies of target RGroupDecomposition
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2020.03.4 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target MMPA
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend.internal".
Scanning dependencies of target molInterchangeTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp:34:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
[ 84%] Linking CXX executable substructLibraryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -o substructLibraryTest  ../../../lib/libRDKitSubstructLibrary.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target substructLibraryTest
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend.internal".
Scanning dependencies of target rdmolfiles
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp:31:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX executable molInterchangeTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -o molInterchangeTest1  ../../../lib/libRDKitMolInterchange.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target molInterchangeTest1
[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
/usr/include/c++/10/bits/vector.tcc: In member function 'int RDKit::RGroupDecomposition::add(const RDKit::ROMol&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o  ../../../../lib/libRDKitSubstructLibrary.so.1.2020.03.4 ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target rdSubstructLibrary
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend.internal".
Scanning dependencies of target ChemReactions
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp
[ 85%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRGroupDecomposition.so.1 -o ../../../lib/libRDKitRGroupDecomposition.so.1.2020.03.4 CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o  ../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2020.03.4 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target RGroupDecomposition
make  -f Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/depend.internal".
Scanning dependencies of target testATF
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/testATF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testATF.dir/testATF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testATF.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp:13:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:22:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable testATF
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testATF.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testATF.dir/testATF.cpp.o -o testATF  ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target testATF
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend.internal".
Scanning dependencies of target testAUTOCORR2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend.internal".
Scanning dependencies of target testDescriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++ -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MDLParser.cpp
[ 85%] Linking CXX executable testAUTOCORR2D
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR2D.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -o testAUTOCORR2D  ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 85%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target testAUTOCORR2D
make  -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend.internal".
Scanning dependencies of target rdMolDescriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDescriptors_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/DaylightParser.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp:22:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.cpp
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:18:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp: In function 'boost::python::list {anonymous}::GetUSRFromDistributions(boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:654:18: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  654 |       tmpDist[j] = python::extract<double>(distances[i][j]);
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:12:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributionsFromPoints(boost::python::api::object, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |     y = other.y;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   87 |     z = other.z;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributions(boost::python::api::object, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |     y = other.y;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   87 |     z = other.z;
      |         ~~~~~~^
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:18:
/usr/include/c++/10/bits/stl_vector.h: In function 'void testProperties()':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:18:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::setStreamIndices(RDKit::SDMolSupplier&, boost::python::api::object)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable testDescriptors
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDescriptors.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDescriptors.dir/test.cpp.o -o testDescriptors  ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTMolSupplier.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Built target testDescriptors
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionDepict.cpp
make  -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
[ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend.internal".
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
Scanning dependencies of target testFMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp: In function 'RDKit::SparseIntVect<unsigned int>* RDKit::DifferenceFingerprintChemReaction(const RDKit::ChemicalReaction&, const RDKit::ReactionFingerprintParams&)':
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:221:42: warning: implicitly-declared 'RDKit::SparseIntVect<unsigned int>& RDKit::SparseIntVect<unsigned int>::operator=(const RDKit::SparseIntVect<unsigned int>&)' is deprecated [-Wdeprecated-copy]
  221 |     (*res) = *productFP - *reactantFP + *agentFP;
      |                                          ^~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:37:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<unsigned int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = unsigned int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:226:28: warning: implicitly-declared 'RDKit::SparseIntVect<unsigned int>& RDKit::SparseIntVect<unsigned int>::operator=(const RDKit::SparseIntVect<unsigned int>&)' is deprecated [-Wdeprecated-copy]
  226 |     (*res) = *productFP - *reactantFP;
      |                            ^~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:37:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<unsigned int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = unsigned int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
[ 87%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp:20:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target rdMolDescriptors
[ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp:48:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend.internal".
Scanning dependencies of target rdFMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp:34:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MoleculeParser.cpp
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
[ 88%] Linking CXX executable testFMCS
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -o testFMCS  ../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target testFMCS
[ 88%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend.internal".
Scanning dependencies of target FMCStest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'std::string testChEMBL_Txt(const char*, double, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:546:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
  546 |   fprintf(fres, "%s;%lu;%.1f;%.4f;%u;%u;%s;", test, mols.size(), th, sec,
      |                     ~~^                             ~~~~~~~~~~~
      |                       |                                      |
      |                       long unsigned int                      std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                     %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet_SMI(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1227:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1227 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1239:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1239 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s\n", n, mols.size(),
      |                         ~~^                         ~~~~~~~~~~~
      |                           |                                  |
      |                           long unsigned int                  std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1344:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1344 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1397:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1397 |       fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1485:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1485 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/../../RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:48:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp
[ 88%] Linking CXX executable FMCStest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCStest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FMCStest.dir/testFMCS.cpp.o -o FMCStest  ../../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target FMCStest
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend.internal".
Scanning dependencies of target molHashCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::ReactionRunnerUtils::generateProductConformers(RDKit::Conformer*, const RDKit::ROMol&, RDKit::ReactionRunnerUtils::ReactantProductAtomMapping*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o  ../../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target rdFMCS
make  -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend.internal".
Scanning dependencies of target testMolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/testMolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMolHash.dir/testMolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/testMolHash.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp:20:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target rdmolfiles
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend.internal".
Scanning dependencies of target rdMolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolHash_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp
[ 88%] Linking CXX executable testMolHash
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolHash.dir/testMolHash.cpp.o -o testMolHash  ../../../lib/libRDKitMolHash.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target testMolHash
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend.internal".
Scanning dependencies of target testMMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o  ../../../../lib/libRDKitMolHash.so.1.2020.03.4 ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target rdMolHash
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend.internal".
Scanning dependencies of target rdMMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
[ 88%] Linking CXX executable testMMPA
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -o testMMPA  ../../../lib/libRDKitMMPA.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target testMMPA
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend.internal".
Scanning dependencies of target testRGroupDecomp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp:32:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 88%] Linking CXX executable testRGroupDecomp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMMPA.so CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o  ../../../../lib/libRDKitMMPA.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -o testRGroupDecomp  ../../../lib/libRDKitRGroupDecomposition.so.1.2020.03.4 ../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target rdMMPA
make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
[ 88%] Built target testRGroupDecomp
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend.internal".
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
Scanning dependencies of target rdRGroupDecomposition
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/multiprecision/detail/number_base.hpp:18,
                 from /usr/include/boost/multiprecision/traits/is_variable_precision.hpp:10,
                 from /usr/include/boost/multiprecision/detail/precision.hpp:9,
                 from /usr/include/boost/multiprecision/number.hpp:24,
                 from /usr/include/boost/multiprecision/cpp_int.hpp:12,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp:36:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::EnumerationStrategyBase::initialize(const RDKit::ChemicalReaction&, const BBS&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp:46:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
[ 89%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o  ../../../../lib/libRDKitRGroupDecomposition.so.1.2020.03.4 ../../../../lib/libRDKitFMCS.so.1.2020.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target rdRGroupDecomposition
[ 89%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2020.03.4 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o  ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target ChemReactions
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend.internal".
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend.internal".
Scanning dependencies of target testReaction
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
Scanning dependencies of target rxnTestCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
Scanning dependencies of target testReactionFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
[ 90%] Linking CXX executable testReactionFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -o testReactionFingerprints  ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target testReactionFingerprints
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend.internal".
Scanning dependencies of target testEnumeration
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++ -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp
[ 90%] Linking CXX executable molHashCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/molHashCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -o molHashCatchTest  ../../../lib/libRDKitMolHash.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target molHashCatchTest
make  -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend.internal".
Scanning dependencies of target rdChemReactions
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp:34:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::EnumerationStrategyBase::initialize(const RDKit::ChemicalReaction&, const BBS&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX executable testEnumeration
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumeration.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -o testEnumeration  ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target testEnumeration
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend.internal".
Scanning dependencies of target MolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:61,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]':
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1921 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/vector.tcc: In function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:61,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/stl_algobase.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp: In member function 'void RDKit::MolDraw2D::calculateScale(int, int, const std::vector<RDKit::ROMol*>&, const std::vector<std::vector<int> >*, const std::vector<std::map<int, double> >*, const std::vector<int>*, std::vector<std::unique_ptr<RDKit::RWMol> >&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:941:10: warning: variable 'global_scale' set but not used [-Wunused-but-set-variable]
  941 |   double global_scale, global_x_min, global_x_max, global_y_min, global_y_max;
      |          ^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp: In lambda function:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:2276:18: warning: this statement may fall through [-Wimplicit-fallthrough=]
 2276 |         draw_spot(ncds);
      |         ~~~~~~~~~^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:2277:7: note: here
 2277 |       case 1:
      |       ^~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::ToBBS(RDKit::EnumerationStrategyBase&, RDKit::ChemicalReaction&, boost::python::list)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/char_traits.h:39,
                 from /usr/include/c++/10/string:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_algobase.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<const RDKit::DrawColour*, std::vector<RDKit::DrawColour> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const RDKit::DrawColour>]':
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1921 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1921:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  184 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]':
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/vector.tcc:161:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_vector.h:1461:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1461 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
 1665 |    _M_range_insert(__pos, __first, __last,
      |    ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
 1666 |      std::__iterator_category(__first));
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1665:19: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:32:
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
  689 |         }
      |         ^
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/10/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<RDKit::DrawColour, RDKit::DrawColour>}; _Tp = std::pair<RDKit::DrawColour, RDKit::DrawColour>; _Alloc = std::allocator<std::pair<RDKit::DrawColour, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<RDKit::DrawColour, RDKit::DrawColour> >::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDGeom::Point2D}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::MolDraw2D::extractAtomCoords(const RDKit::ROMol&, int, bool)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'double RDKit::MolDraw2D::getNoteStartAngle(const RDKit::ROMol&, const RDKit::Atom*) const':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'virtual void RDKit::MolDraw2D::drawRect(const RDGeom::Point2D&, const RDGeom::Point2D&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'virtual void RDKit::MolDraw2D::drawArc(const RDGeom::Point2D&, double, double, double, double)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::MolDraw2D::drawHighlightedBonds(const RDKit::ROMol&, const std::map<int, std::vector<RDKit::DrawColour> >&, const std::map<int, int>&, const std::map<int, double>*)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2193 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_map.h: In member function 'RDKit::DrawColour RDKit::MolDraw2D::getColourByAtomicNum(int)':
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 90%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In member function 'void RDKit::MolDraw2D::get2DCoordsForReaction(RDKit::ChemicalReaction&, RDGeom::Point2D&, RDGeom::Point2D&, std::vector<double>&, double, const std::vector<int>*)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/char_traits.h:39,
                 from /usr/include/c++/10/string:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_algobase.h: In member function 'virtual void RDKit::MolDraw2D::drawMoleculeWithHighlights(const RDKit::ROMol&, const string&, const std::map<int, std::vector<RDKit::DrawColour> >&, const std::map<int, std::vector<RDKit::DrawColour> >&, const std::map<int, double>&, const std::map<int, int>&, int)':
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<RDKit::DrawColour, RDKit::DrawColour>*, std::vector<std::pair<RDKit::DrawColour, RDKit::DrawColour> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/char_traits.h:39,
                 from /usr/include/c++/10/string:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algobase.h:1974:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
 1974 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
 1975 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void RDKit::MolDraw2D::drawReaction(const RDKit::ChemicalReaction&, bool, const std::vector<RDKit::DrawColour>*, const std::vector<int>*)':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  501 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  502 |          std::tuple<const key_type&>(__k),
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  503 |          std::tuple<>());
      |          ~~~~~~~~~~~~~~~             
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/10/bits/stl_vector.h: In function 'void test25Conformers()':
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h:960:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  960 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/10/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:171:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  171 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::MolClearComputedProps(const RDOb&) [with RDOb = RDKit::ChemicalReaction]':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_vector.h: In function 'void RDKit::MolClearProp(const RDOb&, const char*) [with RDOb = RDKit::ChemicalReaction]':
/usr/include/c++/10/bits/stl_vector.h:1431:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
 1431 |       { return _M_erase(begin() + (__position - cbegin())); }
      |                ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void RDKit::MolDraw2D_detail::arcPoints(const RDGeom::Point2D&, const RDGeom::Point2D&, std::vector<RDGeom::Point2D>&, float, float)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp
[ 90%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o  ../../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target rdChemReactions
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend.internal".
Scanning dependencies of target MolStandardize
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {conrec::ConrecSegment}; _Tp = conrec::ConrecSegment; _Alloc = std::allocator<conrec::ConrecSegment>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<conrec::ConrecSegment>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'void conrec::Contour(const double*, size_t, size_t, size_t, size_t, const double*, const double*, size_t, double*, std::vector<conrec::ConrecSegment>&)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<conrec::ConrecSegment*, std::vector<conrec::ConrecSegment> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Linking CXX shared library ../../../lib/libRDKitMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolDraw2D.so.1 -o ../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 ../../../lib/libRDKitMolDraw2D.so.1 ../../../lib/libRDKitMolDraw2D.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target MolDraw2D
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.cpp
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.cpp
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend.internal".
Scanning dependencies of target moldraw2DRxnTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 91%] Linking CXX executable testReaction
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReaction.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReaction.dir/testReaction.cpp.o -o testReaction  ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Built target testReaction
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In function 'void test3()':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 91%] Linking CXX executable moldraw2DRxnTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -o moldraw2DRxnTest1  ../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend.internal".
[ 91%] Built target moldraw2DRxnTest1
Scanning dependencies of target moldraw2DTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
[ 91%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp
[ 91%] Linking CXX executable rxnTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -o rxnTestCatch  ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Built target rxnTestCatch
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend.internal".
Scanning dependencies of target moldraw2DTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
make  -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend.internal".
Scanning dependencies of target rdMolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDraw2D_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::contourAndDrawGridHelper(RDKit::MolDraw2D&, boost::python::api::object&, boost::python::api::object&, boost::python::api::object&, unsigned int, boost::python::api::object&, const RDKit::MolDraw2DUtils::ContourParams&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:479:31: warning: comparison of integer expressions of different signedness: 'npy_intp' {aka 'int'} and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  479 |   if (PyArray_DIM(dataArr, 0) != xcoords->size()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:485:31: warning: comparison of integer expressions of different signedness: 'npy_intp' {aka 'int'} and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  485 |   if (PyArray_DIM(dataArr, 1) != ycoords->size()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour&}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'testGithub2931()::<lambda(const std::vector<int>&, RDKit::DrawColour, std::map<int, std::vector<RDKit::DrawColour> >&)>':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/10/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/10/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/10/bits/stl_tree.h:2193:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' changed in GCC 7.1
 2193 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/10/bits/stl_map.h: In function 'void test14BWPalette()':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = RDGeom::Point2D]':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:266:57: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  266 |   Point2D(const Point2D &other) : Point(other), x(other.x), y(other.y) {}
      |                                                   ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:266:69: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
  266 |   Point2D(const Point2D &other) : Point(other), x(other.x), y(other.y) {}
      |                                                               ~~~~~~^
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h: In function 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:119:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |       T v = python::extract<T>(obj[i]);
      |         ^
In file included from /usr/include/c++/10/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/10/map:60,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::useBWAtomPalette(RDKit::MolDrawOptions&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::{anonymous}::pyDictToColourMap(boost::python::api::object, RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 93%] Linking CXX executable moldraw2DTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -o moldraw2DTest1  ../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::{anonymous}::pyDictToDoubleMap(boost::python::api::object, std::map<int, double>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:72:57: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   72 |     double r = python::extract<double>(tDict.values()[i]);
      |                                                         ^
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target moldraw2DTest1
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend.internal".
Scanning dependencies of target rdmolops
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolops.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
[ 94%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/Draw/rdMolDraw2D.so CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o  ../../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 ../../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
[ 94%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target rdMolDraw2D
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:30:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In destructor 'virtual boost_adaptbx::python::ostream::~ostream()':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: warning: 'throw' will always call 'terminate' [-Wterminate]
  510 |       throw std::runtime_error(
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~
  511 |           "Problem closing python ostream.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  512 |           "  Known limitation: the error is unrecoverable. Sorry.\n"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  513 |           "  Suggestion for programmer: add ostream.flush() before"
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  514 |           " returning.");
      |           ~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:510:7: note: in C++11 destructors default to 'noexcept'
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp:10:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target MolStandardize
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend.internal".
Scanning dependencies of target molStandardizeTest
Scanning dependencies of target molStandardizeSmallTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/test1.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/test2.cpp
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:44,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /usr/include/boost/python/operators.hpp:19,
                 from /usr/include/boost/python.hpp:49,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Linking CXX executable molStandardizeSmallTest
[ 96%] Linking CXX executable molStandardizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeSmallTest.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -o molStandardizeSmallTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeTest.dir/test1.cpp.o -o molStandardizeTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target molStandardizeSmallTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
[ 96%] Built target molStandardizeTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend.internal".
Scanning dependencies of target molNormalizeTest
Scanning dependencies of target molValidateTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testValidate.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testNormalize.cpp
In file included from /usr/include/c++/10/map:60,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:16,
                 from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:5,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 97%] Linking CXX executable molNormalizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -o molNormalizeTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
[ 97%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o  ../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 ../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
[ 97%] Linking CXX executable molValidateTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molValidateTest.dir/testValidate.cpp.o -o molValidateTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target molNormalizeTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
[ 97%] Built target molValidateTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend.internal".
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend.internal".
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target molChargeTest
Scanning dependencies of target molTautomerTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target rdmolops
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testTautomer.cpp
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testCharge.cpp
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend.internal".
Scanning dependencies of target molFragmentTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testFragment.cpp
[ 98%] Linking CXX executable molChargeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molChargeTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molChargeTest.dir/testCharge.cpp.o -o molChargeTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target molChargeTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend.internal".
Scanning dependencies of target molStandardizeCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp
[ 98%] Linking CXX executable molFragmentTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -o molFragmentTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target molFragmentTest
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend.internal".
Scanning dependencies of target rdMolStandardize
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
In file included from /usr/include/c++/10/map:60,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:4245,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:4245,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
[ 98%] Linking CXX executable molTautomerTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -o molTautomerTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target molTautomerTest
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/depend.internal".
Scanning dependencies of target ScaffoldNetwork
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SCAFFOLDNETWORK_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DScaffoldNetwork_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/ScaffoldNetwork.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
[ 98%] Linking CXX shared library ../../../lib/libRDKitScaffoldNetwork.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitScaffoldNetwork.so.1 -o ../../../lib/libRDKitScaffoldNetwork.so.1.2020.03.4 CMakeFiles/ScaffoldNetwork.dir/ScaffoldNetwork.cpp.o  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitScaffoldNetwork.so.1.2020.03.4 ../../../lib/libRDKitScaffoldNetwork.so.1 ../../../lib/libRDKitScaffoldNetwork.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target ScaffoldNetwork
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/depend.internal".
Scanning dependencies of target testScaffoldNetwork
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/catch_main.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SCAFFOLDNETWORK_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testScaffoldNetwork.dir/catch_main.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/catch_main.cpp
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
[ 98%] Linking CXX executable molStandardizeCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeCatchTest.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -o molStandardizeCatchTest  ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target molStandardizeCatchTest
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/catch_main.cpp:12:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/catch_main.cpp:12:
/usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1198 |    _M_realloc_insert(end(), __x);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o
[ 99%] Building CXX object Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDKIT_SCAFFOLDNETWORK_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -std=gnu++11 -o CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/catch_tests.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Tautomer.cpp
[ 99%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o CMakeFiles/rdMolStandardize.dir/Tautomer.cpp.o  ../../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
[ 99%] Linking CXX executable moldraw2DTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTestCatch.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -o moldraw2DTestCatch  ../../../lib/libRDKitMolDraw2D.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target moldraw2DTestCatch
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/DependInfo.cmake --color=
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/DependInfo.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/depend.internal".
Dependee "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/depend.internal".
Scanning dependencies of target rdScaffoldNetwork
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Building CXX object Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap && /usr/bin/c++ -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdScaffoldNetwork_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.9 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC -std=gnu++11 -o CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap/rdScaffoldNetwork.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdMolStandardize
[100%] Linking CXX executable testScaffoldNetwork
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork && /usr/bin/cmake -E cmake_link_script CMakeFiles/testScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/c++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testScaffoldNetwork.dir/catch_main.cpp.o CMakeFiles/testScaffoldNetwork.dir/catch_tests.cpp.o -o testScaffoldNetwork  ../../../lib/libRDKitScaffoldNetwork.so.1.2020.03.4 ../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target testScaffoldNetwork
[100%] Linking CXX shared module ../../../../rdkit/Chem/Scaffolds/rdScaffoldNetwork.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdScaffoldNetwork.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/Scaffolds/rdScaffoldNetwork.so CMakeFiles/rdScaffoldNetwork.dir/rdScaffoldNetwork.cpp.o  ../../../../lib/libRDKitScaffoldNetwork.so.1.2020.03.4 ../../../../lib/libRDKitRDBoost.so.1.2020.03.4 -lpython3.9 -lboost_python39 -lboost_serialization ../../../../lib/libRDKitMolStandardize.so.1.2020.03.4 ../../../../lib/libRDKitChemReactions.so.1.2020.03.4 ../../../../lib/libRDKitFilterCatalog.so.1.2020.03.4 ../../../../lib/libRDKitCatalogs.so.1.2020.03.4 ../../../../lib/libRDKitDescriptors.so.1.2020.03.4 ../../../../lib/libRDKitPartialCharges.so.1.2020.03.4 ../../../../lib/libRDKitFingerprints.so.1.2020.03.4 ../../../../lib/libRDKitSubgraphs.so.1.2020.03.4 ../../../../lib/libRDKitFileParsers.so.1.2020.03.4 ../../../../lib/libRDKitDepictor.so.1.2020.03.4 ../../../../lib/libRDKitMolAlign.so.1.2020.03.4 ../../../../lib/libRDKitMolTransforms.so.1.2020.03.4 ../../../../lib/libRDKitEigenSolvers.so.1.2020.03.4 ../../../../lib/libRDKitAlignment.so.1.2020.03.4 ../../../../lib/libRDKitForceFieldHelpers.so.1.2020.03.4 ../../../../lib/libRDKitForceField.so.1.2020.03.4 ../../../../lib/libRDKitOptimizer.so.1.2020.03.4 ../../../../lib/libRDKitTrajectory.so.1.2020.03.4 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2020.03.4 ../../../../lib/libRDKitSmilesParse.so.1.2020.03.4 ../../../../lib/libRDKitSubstructMatch.so.1.2020.03.4 ../../../../lib/libRDKitGraphMol.so.1.2020.03.4 ../../../../lib/libRDKitRDGeometryLib.so.1.2020.03.4 ../../../../lib/libRDKitDataStructs.so.1.2020.03.4 ../../../../lib/libRDKitRDGeneral.so.1.2020.03.4 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdScaffoldNetwork
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
STATIC_LINK=0 RDKIT_LIBDIR=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib pg_buildext build /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### PostgreSQL 13 build ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-13'
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o rdkit_io.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o mol_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_murckoscaffold':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:263:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  263 |   CROMol scaffold = MolMurckoScaffold(mol);
      |   ^~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:285:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  285 |   char *res = pnstrdup(str, len);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_nm_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:300:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  300 |   char *str = computeNMMolHash(mol, opts);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:302:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  302 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:295:7: warning: unused variable 'len' [-Wunused-variable]
  295 |   int len;
      |       ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_adjust_query_properties':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:315:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  315 |   char *data = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:321:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  321 |   Mol *res = deconstructROMol(adj);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:336:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  336 |   char *legend = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:360:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  360 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol2s_transition':
/usr/include/postgresql/13/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:412:18: note: in expansion of macro 'PG_GETARG_DATUM'
  412 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:428:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  428 |     text *ts = (text *)palloc(ts_size);  // new return value
      |     ^~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/usr/include/postgresql/13/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:440:18: note: in expansion of macro 'PG_GETARG_DATUM'
  440 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:448:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  448 |     char *smiles = makeMolText(mol, &len, false, false);
      |     ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mols':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:486:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  486 |   int32 ts_size = VARHDRSZ + strlen(str);
      |   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/usr/include/postgresql/13/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:508:18: note: in expansion of macro 'PG_GETARG_DATUM'
  508 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/usr/include/postgresql/13/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:519:18: note: in expansion of macro 'PG_GETARG_DATUM'
  519 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:392:1: warning: control reaches end of non-void function [-Wreturn-type]
  392 | }
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:527:1: warning: control reaches end of non-void function [-Wreturn-type]
  527 | }
      | ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o sfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o rxn_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:164:1: warning: multi-line comment [-Wcomment]
  164 | //  /* keep compiler quiet - no extra ; */                                \
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c: In function 'reaction_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:179:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  179 |   bool highlightByReactants = PG_GETARG_BOOL(1);
      |   ^~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o rdkit_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldistsign':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:239:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  239 |   uint8 *as = (uint8 *)VARDATA(a);
      |   ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldist':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:274:16: warning: implicit declaration of function 'floor' [-Wimplicit-function-declaration]
  274 |   return (int) floor(10000*soergeldistsign(a, b));
      |                ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:274:16: warning: incompatible implicit declaration of built-in function 'floor'
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:41:1: note: include '<math.h>' or provide a declaration of 'floor'
   40 | #include "bitstring.h"
  +++ |+#include <math.h>
   41 | 
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:261:10: warning: unused variable 'd' [-Wunused-variable]
  261 |   double d;
      |          ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gmol_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:525:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  525 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:537:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  537 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:569:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  569 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'rdkit_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:657:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  657 |   int siglen = SIGLEN(query);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:672:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  672 |     uint8 *k = (uint8 *)VARDATA(key);
      |     ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gsfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:707:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  707 |   int sum, overlapSum, overlapN;
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:713:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  713 |   int nKey = (ISALLTRUE(key)) ?
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'greaction_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:786:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  786 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:803:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  803 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:831:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  831 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
At top level:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:645:1: warning: 'rdkit_consistent' defined but not used [-Wunused-function]
  645 | rdkit_consistent(GISTENTRY *entry, StrategyNumber strategy, bytea *key, bytea *query)
      | ^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:260:1: warning: 'soergeldist' defined but not used [-Wunused-function]
  260 | soergeldist(bytea *a, bytea *b) {
      | ^~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bfp_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c: In function 'merge_key':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c:698:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  698 |   int siglen = GBFP_INNER_SIGLEN(result);
      |   ^~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bfp_gin.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o low_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c: In function 'gslfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:409:30: warning: implicit declaration of function 'searchSfpCache' [-Wimplicit-function-declaration]
  409 |   fcinfo->flinfo->fn_extra = searchSfpCache(
      |                              ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:409:28: warning: assignment to 'void *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
  409 |   fcinfo->flinfo->fn_extra = searchSfpCache(
      |                            ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o guc.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o cache.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c: In function 'createCache':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:312:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
  312 |     methodsOrig = ctx->methods;
      |                 ^
In file included from /usr/include/postgresql/13/server/postgres.h:47,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:33:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:19: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'unsigned int' [-Wformat=]
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~~~~~~~~~~~
      |                                                   |
      |                                                   unsigned int
/usr/include/postgresql/13/server/utils/elog.h:128:4: note: in definition of macro 'ereport_domain'
  128 |    __VA_ARGS__, errfinish(__FILE__, __LINE__, PG_FUNCNAME_MACRO); \
      |    ^~~~~~~~~~~
/usr/include/postgresql/13/server/utils/elog.h:215:2: note: in expansion of macro 'ereport'
  215 |  ereport(elevel, errmsg_internal(__VA_ARGS__))
      |  ^~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:7: note: in expansion of macro 'elog'
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |       ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:41: note: format string is defined here
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |                                       ~~^
      |                                         |
      |                                         long int
      |                                       %d
g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-function -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o adapter.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /usr/include/c++/10/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:32:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:32:
/usr/include/c++/10/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
 2458 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:32:
/usr/include/c++/10/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
/usr/include/c++/10/bits/stl_map.h:520:37: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' changed in GCC 7.1
  520 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  521 |      std::forward_as_tuple(std::move(__k)),
      |      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  522 |      std::tuple<>());
      |      ~~~~~~~~~~~~~~~                 
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -fPIC -c -o bitstring.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringUnion':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:72:7: warning: unused variable 'i' [-Wunused-variable]
   72 |   int i;
      |       ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringIntersection':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:106:7: warning: unused variable 'i' [-Wunused-variable]
  106 |   int i;
      |       ^
g++ -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wimplicit-fallthrough=3 -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -shared -o rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rxn_op.o rdkit_gist.o bfp_gist.o bfp_gin.o low_gist.o guc.o cache.o adapter.o bitstring.o -L/usr/lib/arm-linux-gnueabihf  -Wl,-z,relro -Wl,-z,now -L/usr/lib/llvm-11/lib  -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -L/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib   -lRDKitMolDraw2D -lRDKitMolTransforms -lRDKitMolHash -lRDKitFMCS -lRDKitChemReactions -lRDKitChemTransforms -lRDKitFileParsers -lRDKitSmilesParse -lRDKitFingerprints -lRDKitSubgraphs -lRDKitDescriptors -lRDKitPartialCharges -lRDKitSubstructMatch  -lRDKitGraphMol -lRDKitEigenSolvers -lRDKitDataStructs -lRDKitDepictor -lRDKitRDGeometryLib -lRDKitRDGeneral -pthread  
sed -e's/@RDKIT_PG_BFP_GIST_FETCH@/FUNCTION    9   gbfp_fetch (internal),/;' \
-e's/@RDKIT_GIN_BFP_TRICONSISTENT@/FUNCTION    6   gin_bfp_triconsistent(internal, int2, bfp, int4, internal, internal, internal),/' \
-e's/@RDKIT_PARALLEL_SAFE@/PARALLEL SAFE/' \
 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.sql.in > rdkit--3.8.sql
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o rdkit_io.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o mol_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:392:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:412:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:440:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:508:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:519:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:527:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
6 warnings generated.
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o sfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o rxn_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o rdkit_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bfp_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bfp_gin.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o low_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:409:30: warning: implicit declaration of function 'searchSfpCache' is invalid in C99 [-Wimplicit-function-declaration]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:409:28: warning: incompatible integer to pointer conversion assigning to 'void *' from 'int' [-Wint-conversion]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                           ^ ~~~~~~~~~~~~~~~
2 warnings generated.
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o guc.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o cache.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:312:17: warning: assigning to 'MemoryContextMethods *' (aka 'struct MemoryContextMethods *') from 'const MemoryContextMethods *' (aka 'const struct MemoryContextMethods *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
    methodsOrig = ctx->methods;
                ^ ~~~~~~~~~~~~
1 warning generated.
/usr/bin/clang-11 -xc++ -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -emit-llvm -c -o adapter.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:32:
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23:
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26:
In file included from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28:
In file included from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:23:
/<<PKGBUILDDIR>>/Code/RDGeneral/Exceptions.h:28:12: warning: address of stack memory associated with local variable 'msg' returned [-Wreturn-stack-address]
    return msg.c_str();
           ^~~
/<<PKGBUILDDIR>>/Code/RDGeneral/Exceptions.h:66:12: warning: address of stack memory associated with local variable 'msg' returned [-Wreturn-stack-address]
    return msg.c_str();
           ^~~
2 warnings generated.
/usr/lib/llvm-11/bin/opt -module-summary -f adapter.bc -o adapter.bc
/usr/bin/clang-11 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/13/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -flto=thin -emit-llvm -c -o bitstring.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-13'
### End 13 build ###
(cd /<<PKGBUILDDIR>>/Code; doxygen doxygen/doxygen.config)
warning: Tag 'TCL_SUBST' at line 213 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SYMBOL_CACHE_SIZE' at line 337 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 557 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 971 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'USE_INLINE_TREES' at line 1162 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1425 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 1431 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1596 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1617 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
Using the default: a4!
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
Doxygen version used: 1.8.20
Searching for include files...
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/tutorial
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Depictor
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FMCS
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/libs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MMPA
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/QTDemo
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_images
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static/css
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static/fonts
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static/js
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Substruct
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory
Searching for files in directory /<<PKGBUILDDIR>>/Code/Catalogs
Searching for files in directory /<<PKGBUILDDIR>>/Code/DataStructs
Searching for files in directory /<<PKGBUILDDIR>>/Code/Query
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/Cluster
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/Data
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/InfoTheory
Searching for files in directory /<<PKGBUILDDIR>>/Code/DataManip
Searching for files in directory /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc
Searching for files in directory /<<PKGBUILDDIR>>/Code/SimDivPickers
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDGeneral
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDGeneral/hash
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDGeneral/hash/detail
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDBoost
Searching for files in directory /<<PKGBUILDDIR>>/Code/DistGeom
Searching for files in directory /<<PKGBUILDDIR>>/Code/ForceField
Searching for files in directory /<<PKGBUILDDIR>>/Code/ForceField/MMFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/ForceField/UFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics/Alignment
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics/Optimizer
Searching for files in directory /<<PKGBUILDDIR>>/Code/Geometry
Searching for files in directory /<<PKGBUILDDIR>>/Code/Features
Searching for files in directory /<<PKGBUILDDIR>>/Code/ChemicalFeatures
Reading and parsing tag files
Parsing files
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Bond.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Bond.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Canon.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Canon.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AtomFeat.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/BCUT.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/CoulombMat.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/CoulombMat.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/EEM.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/EEM.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PMI.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PMI.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/WHIM.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/WHIM.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParserUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParserUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...

Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RDKitQueries.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RDKitQueries.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Rings.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Rings.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SanitException.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SanitException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/detail.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/detail.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/ScaffoldNetwork.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/ScaffoldNetwork.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParseOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParseOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/primes.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/primes.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Pattern.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Pattern.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/ReCharge.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/ReCharge.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Stereo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Stereo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructChecker.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructChecker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Tautomer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Tautomer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Utilites.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Utilites.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/PatternFactory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/PatternFactory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/base64.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/base64.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitVectUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitVectUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsException.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsStreamOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsStreamOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/AndQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/AndQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/EqualityQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/EqualityQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/GreaterEqualQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/GreaterEqualQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/GreaterQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/GreaterQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/LessEqualQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/LessEqualQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/LessQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/LessQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/NullQueryAlgebra.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/NullQueryAlgebra.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/OrQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/OrQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/Query.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/Query.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/RangeQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/RangeQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/SetQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/SetQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/XOrQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/XOrQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ML/InfoTheory/CorrMatGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/ML/InfoTheory/CorrMatGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h...
Parsing file /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoGainFuncs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoGainFuncs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/BoostEndInclude.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/BoostEndInclude.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/BoostStartInclude.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/BoostStartInclude.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Exceptions.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Exceptions.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/export.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/export.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/FileParseException.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/FileParseException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/hanoiSort.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/hanoiSort.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDAny.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDAny.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDConfig.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDConfig.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDThreads.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDThreads.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-doublemagic.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-doublemagic.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/StreamOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/StreamOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/types.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/types.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/versions.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/versions.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/boost_numpy.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/boost_numpy.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/import_array.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/import_array.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/iterator_next.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/iterator_next.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/pyint_api.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/pyint_api.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/python.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/python.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/BoundsMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/BoundsMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/ChiralSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/ChiralSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/FourthDimContrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/FourthDimContrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/Contrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/Contrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Contribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Contribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Contribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Contribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/SymmMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/SymmMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Vector.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Vector.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Grid3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Grid3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/point.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/point.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Utils.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Utils.h/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:61: warning: documented symbol 'for experimental torsion angle RDKit::DGeomHelpers::preferences' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h:25: warning: documented symbol 'enum RDKIT_MOLHASH_EXPORT RDKit::MolHash::HashFunction' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h:47: warning: documented symbol 'enum RDKIT_MOLHASH_EXPORT RDKit::MolHash::StripType' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/ScaffoldNetwork.h:65: warning: documented symbol 'enum RDKIT_SCAFFOLDNETWORK_EXPORT RDKit::ScaffoldNetwork::EdgeType' was not declared or defined.
...
Preprocessing /<<PKGBUILDDIR>>/Code/Features/Feature.h...
Parsing file /<<PKGBUILDDIR>>/Code/Features/Feature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ChemicalFeatures/ChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/ChemicalFeatures/ChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.h...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file AcidBaseCatalogEntry.h...
Generating code for file AcidBaseCatalogParams.h...
Generating code for file AcidBaseCatalogUtils.h...
Generating code for file AlignMolecules.h...
Generating code for file AlignPoints.h...
Generating code for file AndQuery.h...
Generating code for file AngleBend.h...
Generating code for file AngleBend.h...
Generating code for file AngleConstraint.h...
Generating code for file AngleConstraint.h...
Generating code for file Atom.h...
Generating code for file AtomFeat.h...
Generating code for file atomic_data.h...
Generating code for file AtomIterators.h...
Generating code for file AtomPairGenerator.h...
Generating code for file AtomPairs.h...
Generating code for file AtomTyper.h...
Generating code for file AtomTyper.h...
Generating code for file AUTOCORR2D.h...
Generating code for file AUTOCORR3D.h...
Generating code for file BadFileException.h...
Generating code for file base64.h...
Generating code for file BCUT.h...
Generating code for file BFGSOpt.h...
Generating code for file BitOps.h...
Generating code for file BitVect.h...
Generating code for file BitVects.h...
Generating code for file BitVectUtils.h...
Generating code for file Bond.h...
Generating code for file BondIterators.h...
Generating code for file BondStretch.h...
Generating code for file BondStretch.h...
Generating code for file boost_numpy.h...
Generating code for file BoostEndInclude.h...
Generating code for file BoostStartInclude.h...
Generating code for file BoundsMatrix.h...
Generating code for file BoundsMatrixBuilder.h...
Generating code for file Builder.h...
Generating code for file Builder.h...
Generating code for file Canon.h...
Generating code for file CartesianProduct.h...
Generating code for file Catalog.h...
Generating code for file CatalogEntry.h...
Generating code for file CatalogParams.h...
Generating code for file Charge.h...
Generating code for file ChemicalFeature.h...
Generating code for file ChemTransforms.h...
Generating code for file Chirality.h...
Generating code for file ChiralSet.h...
Generating code for file ChiralViolationContrib.h...
Generating code for file Composition2N.h...
Generating code for file Conformer.h...
Generating code for file ConnectivityDescriptors.h...
Generating code for file Conrec.h...
Generating code for file Contrib.h...
Generating code for file Contribs.h...
Generating code for file Contribs.h...
Generating code for file CorrMatGenerator.h...
Generating code for file CoulombMat.h...
Generating code for file Crippen.h...
Generating code for file Data3Ddescriptors.h...
Generating code for file DatastructsException.h...
Generating code for file DatastructsStreamOps.h...
Generating code for file DebugTrace.h...
Generating code for file DepictUtils.h...
Generating code for file detail.h...
Generating code for file details.h...
Generating code for file details.h...
Generating code for file Dict.h...
Generating code for file DiscreteDistMat.h...
Generating code for file DiscreteValueVect.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistGeomUtils.h...
Generating code for file DistPicker.h...
Generating code for file DistViolationContrib.h...
Generating code for file DuplicatedSeedCache.h...
Generating code for file EEM.h...
Generating code for file EmbeddedFrag.h...
Generating code for file Embedder.h...
Generating code for file Enumerate.h...
Generating code for file EnumerateBase.h...
Generating code for file EnumerateTypes.h...
Generating code for file EnumerationPickler.h...
Generating code for file EnumerationStrategyBase.h...
Generating code for file EqualityQuery.h...
Generating code for file EvenSamplePairs.h...
Generating code for file Exceptions.h...
Generating code for file ExplicitBitVect.h...
Generating code for file export.h...
Generating code for file Feature.h...
Generating code for file FeatureParser.h...
Generating code for file FFConvenience.h...
Generating code for file FileParseException.h...
Generating code for file FileParsers.h...
Generating code for file FileParserUtils.h...
Generating code for file FilterCatalog.h...
Generating code for file FilterCatalogEntry.h...
Generating code for file FilterMatcherBase.h...
Generating code for file FilterMatchers.h...
Generating code for file Filters.h...
Generating code for file FingerprintGenerator.h...
Generating code for file Fingerprints.h...
Generating code for file FingerprintUtil.h...
Generating code for file FMCS.h...
Generating code for file ForceField.h...
Generating code for file FourthDimContrib.h...
Generating code for file FPBReader.h...
Generating code for file FragCatalogEntry.h...
Generating code for file FragCatalogUtils.h...
Generating code for file FragCatGenerator.h...
Generating code for file FragCatParams.h...
Generating code for file FragFPGenerator.h...
Generating code for file Fragment.h...
Generating code for file FragmentCatalogEntry.h...
Generating code for file FragmentCatalogParams.h...
Generating code for file FragmentCatalogUtils.h...
Generating code for file FreeChemicalFeature.h...
Generating code for file FunctionalGroupHierarchy.h...
Generating code for file GasteigerCharges.h...
Generating code for file GasteigerParams.h...
Generating code for file GETAWAY.h...
Generating code for file Graph.h...
Generating code for file GraphMol.h...
Generating code for file GreaterEqualQuery.h...
Generating code for file GreaterQuery.h...
Generating code for file Grid3D.h...
Generating code for file GridUtils.h...
Generating code for file hanoiSort.h...
Generating code for file HierarchicalClusterPicker.h...
Generating code for file import_array.h...
Generating code for file InfoBitRanker.h...
Generating code for file InfoGainFuncs.h...
Generating code for file Invariant.h...
Generating code for file Inversion.h...
Generating code for file iterator_next.h...
Generating code for file LeaderPicker.h...
Generating code for file LessEqualQuery.h...
Generating code for file LessQuery.h...
Generating code for file Lipinski.h...
Generating code for file LocaleSwitcher.h...
Generating code for file MACCS.h...
Generating code for file MatchTable.h...
Generating code for file Matrix.h...
Generating code for file MaximumCommonSubgraph.h...
Generating code for file MaxMinPicker.h...
Generating code for file Metal.h...
Generating code for file MetricFuncs.h...
Generating code for file MetricMatrixCalc.h...
Generating code for file mf.h...
Generating code for file MHFP.h...
Generating code for file MMFF.h...
Generating code for file MMPA.h...
Generating code for file MolBundle.h...
Generating code for file MolCatalog.h...
Generating code for file MolCatalogEntry.h...
Generating code for file MolCatalogParams.h...
Generating code for file MolChemicalFeature.h...
Generating code for file MolChemicalFeatureDef.h...
Generating code for file MolChemicalFeatureFactory.h...
Generating code for file MolData3Ddescriptors.h...
Generating code for file MolDescriptors.h...
Generating code for file MolDescriptors3D.h...
Generating code for file MolDraw2D.h...
Generating code for file MolDraw2DCairo.h...
Generating code for file MolDraw2DDetails.h...
Generating code for file MolDraw2DQt.h...
Generating code for file MolDraw2DSVG.h...
Generating code for file MolDraw2DUtils.h...
Generating code for file MolDraw2Dwx.h...
Generating code for file MolFileStereochem.h...
Generating code for file MolFragmenter.h...
Generating code for file MolHash.h...
Generating code for file MolInterchange.h...
Generating code for file MolOps.h...
Generating code for file MolPickler.h...
Generating code for file MolSGroupParsing.h...
Generating code for file MolSGroupWriting.h...
Generating code for file MolStandardize.h...
Generating code for file MolSupplier.h...
Generating code for file MolSurf.h...
Generating code for file MolTransforms.h...
Generating code for file MolWriters.h...
Generating code for file MonomerInfo.h...
Generating code for file MorganFingerprints.h...
Generating code for file MorganGenerator.h...
Generating code for file MORSE.h...
Generating code for file MQN.h...
Generating code for file MultiFPBReader.h...
Generating code for file MultiMolDraw2D.h...
Generating code for file new_canon.h...
Generating code for file nmmolhash.h...
Generating code for file Nonbonded.h...
Generating code for file Nonbonded.h...
Generating code for file Normalize.h...
Generating code for file NullQueryAlgebra.h...
Generating code for file O3AAlignMolecules.h...
Generating code for file OopBend.h...
Generating code for file OrQuery.h...
Generating code for file Params.h...
Generating code for file Params.h...
Generating code for file Pattern.h...
Generating code for file PatternFactory.h...
Generating code for file PBF.h...
Generating code for file PeriodicTable.h...
Generating code for file PMI.h...
Generating code for file point.h...
Generating code for file PositionConstraint.h...
Generating code for file PositionConstraint.h...
Generating code for file PowerEigenSolver.h...
Generating code for file PreprocessRxn.h...
Generating code for file primes.h...
Generating code for file Property.h...
Generating code for file ProximityBonds.h...
Generating code for file pyint_api.h...
Generating code for file PySequenceHolder.h...
Generating code for file python.h...
Generating code for file python_streambuf.h...
Generating code for file Query.h...
Generating code for file QueryAtom.h...
Generating code for file QueryBond.h...
Generating code for file QueryObjects.h...
Generating code for file QueryOps.h...
Generating code for file RandomSample.h...
Generating code for file RandomSampleAllBBs.h...
Generating code for file RangeQuery.h...
Generating code for file Ranking.h...
Generating code for file RDAny.h...
Generating code for file RDConfig.h...
Generating code for file RDDepictor.h...
Generating code for file RDF.h...
Generating code for file RDKitBase.h...
Generating code for file RDKitFPGenerator.h...
Generating code for file RDKitQueries.h...
Generating code for file RDLog.h...
Generating code for file RDProps.h...
Generating code for file RDThreads.h...
Generating code for file RDValue-doublemagic.h...
Generating code for file RDValue-taggedunion.h...
Generating code for file RDValue.h...
Generating code for file Reaction.h...
Generating code for file ReactionFingerprints.h...
Generating code for file ReactionParser.h...
Generating code for file ReactionPickler.h...
Generating code for file ReactionRunner.h...
Generating code for file ReactionUtils.h...
Generating code for file ReCharge.h...
Generating code for file ReducedGraphs.h...
Generating code for file RegisterDescriptor.h...
Generating code for file Resonance.h...
Generating code for file RGroupDecomp.h...
Generating code for file RingInfo.h...
Generating code for file RingMatchTableSet.h...
Generating code for file Rings.h...
Generating code for file ROMol.h...
Generating code for file RWMol.h...
Generating code for file SanitException.h...
Generating code for file SanitizeRxn.h...
Generating code for file ScaffoldNetwork.h...
Generating code for file Seed.h...
Generating code for file SeedSet.h...
Generating code for file SequenceParsers.h...
Generating code for file SequenceWriters.h...
Generating code for file SetQuery.h...
Generating code for file ShapeEncoder.h...
Generating code for file ShapeUtils.h...
Generating code for file SLNAttribs.h...
Generating code for file SLNParse.h...
Generating code for file SLNParseOps.h...
Generating code for file SmartsWrite.h...
Generating code for file SmilesParse.h...
Generating code for file SmilesParseOps.h...
Generating code for file SmilesWrite.h...
Generating code for file Snapshot.h...
Generating code for file SparseBitVect.h...
Generating code for file SparseIntVect.h...
Generating code for file SquareMatrix.h...
Generating code for file Stereo.h...
Generating code for file StereoGroup.h...
Generating code for file StreamOps.h...
Generating code for file StretchBend.h...
Generating code for file StripSmallFragments.h...
Generating code for file StructChecker.h...
Generating code for file StructCheckerOptions.h...
Generating code for file Subgraphs.h...
Generating code for file SubgraphUtils.h...
Generating code for file SubstanceGroup.h...
Generating code for file SubstructLibrary.h...
Generating code for file SubstructLibrarySerialization.h...
Generating code for file SubstructMatch.h...
Generating code for file SubstructMatchCustom.h...
Generating code for file SubstructureCache.h...
Generating code for file SubstructUtils.h...
Generating code for file SymmMatrix.h...
Generating code for file Target.h...
Generating code for file TargetMatch.h...
Generating code for file Tautomer.h...
Generating code for file Tautomer.h...
Generating code for file TautomerCatalogEntry.h...
Generating code for file TautomerCatalogParams.h...
Generating code for file TautomerCatalogUtils.h...
Generating code for file TopologicalTorsionGenerator.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionAngleM6.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionPreferences.h...
Generating code for file Trajectory.h...
Generating code for file Transform.h...
Generating code for file Transform2D.h...
Generating code for file Transform3D.h...
Generating code for file TransformCatalogEntry.h...
Generating code for file TransformCatalogParams.h...
Generating code for file TransformCatalogUtils.h...
Generating code for file TriangleSmooth.h...
Generating code for file types.h...
Generating code for file UFF.h...
Generating code for file UniformGrid3D.h...
Generating code for file USRDescriptor.h...
Generating code for file Utilites.h...
Generating code for file Utils.h...
Generating code for file utils.h...
Generating code for file Validate.h...
Generating code for file Vector.h...
Generating code for file versions.h...
Generating code for file WHIM.h...
Generating code for file X/<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:183: warning: found </tt> at different nesting level (7) than expected (4)
/<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:184: warning: end of comment block while expecting command </tt>
OrQuery.h...
Generating file documentation...
Generating docs for file AcidBaseCatalogEntry.h...
Generating docs for file AcidBaseCatalogParams.h...
Generating docs for file AcidBaseCatalogUtils.h...
Generating docs for file AlignMolecules.h...
Generating docs for file AlignPoints.h...
Generating docs for file AndQuery.h...
Generating docs for file AngleBend.h...
Generating docs for file AngleBend.h...
Generating docs for file AngleConstraint.h...
Generating docs for file AngleConstraint.h...
Generating docs for file Atom.h...
Generating docs for file AtomFeat.h...
Generating docs for file atomic_data.h...
Generating docs for file AtomIterators.h...
Generating docs for file AtomPairGenerator.h...
Generating docs for file AtomPairs.h...
Generating docs for file AtomTyper.h...
Generating docs for file AtomTyper.h...
Generating docs for file AUTOCORR2D.h...
Generating docs for file AUTOCORR3D.h...
Generating docs for file BadFileException.h...
Generating docs for file base64.h...
Generating docs for file BCUT.h...
Generating docs for file BFGSOpt.h...
Generating docs for file BitOps.h...
Generating docs for file BitVect.h...
Generating docs for file BitVects.h...
Generating docs for file BitVectUtils.h...
Generating docs for file Bond.h...
Generating docs for file BondIterators.h...
Generating docs for file BondStretch.h...
Generating docs for file BondStretch.h...
Generating docs for file boost_numpy.h...
Generating docs for file BoostEndInclude.h...
Generating docs for file BoostStartInclude.h...
Generating docs for file BoundsMatrix.h...
Generating docs for file BoundsMatrixBuilder.h...
Generating docs for file Builder.h...
Generating docs for file Builder.h...
Generating docs for file Canon.h...
Generating docs for file CartesianProduct.h...
Generating docs for file Catalog.h...
Generating docs for file CatalogEntry.h...
Generating docs for file CatalogParams.h...
Generating docs for file Charge.h...
Generating docs for file ChemicalFeature.h...
Generating docs for file ChemTransforms.h...
Generating docs for file Chirality.h...
Generating docs for file ChiralSet.h...
Generating docs for file ChiralViolationContrib.h...
Generating docs for file Composition2N.h...
Generating docs for file Conformer.h...
Generating docs for file ConnectivityDescriptors.h...
Generating docs for file Conrec.h...
Generating docs for file Contrib.h...
Generating docs for file Contribs.h...
Generating docs for file Contribs.h...
Generating docs for file CorrMatGenerator.h...
Generating docs for file CoulombMat.h...
Generating docs for file Crippen.h...
Generating docs for file Data3Ddescriptors.h...
Generating docs for file DatastructsException.h...
Generating docs for file DatastructsStreamOps.h...
Generating docs for file DebugTrace.h...
Generating docs for file DepictUtils.h...
Generating docs for file detail.h...
Generating docs for file details.h...
Generating docs for file details.h...
Generating docs for file Dict.h...
Generating docs for file DiscreteDistMat.h...
Generating docs for file DiscreteValueVect.h...
Generating docs for file DistanceConstraint.h...
Generating docs for file DistanceConstraint.h...
Generating docs for file DistGeomUtils.h...
Generating docs for file DistPicker.h...
Generating docs for file DistViolationContrib.h...
Generating docs for file DuplicatedSeedCache.h...
Generating docs for file EEM.h...
Generating docs for file EmbeddedFrag.h...
Generating docs for file Embedder.h...
Generating docs for file Enumerate.h...
Generating docs for file EnumerateBase.h...
Generating docs for file EnumerateTypes.h...
Generating docs for file EnumerationPickler.h...
Generating docs for file EnumerationStrategyBase.h...
Generating docs for file EqualityQuery.h...
Generating docs for file EvenSamplePairs.h...
Generating docs for file Exceptions.h...
Generating docs for file ExplicitBitVect.h...
Generating docs for file export.h...
Generating docs for file Feature.h...
Generating docs for file FeatureParser.h...
Generating docs for file FFConvenience.h...
Generating docs for file FileParseException.h...
Generating docs for file FileParsers.h...
Generating docs for file FileParserUtils.h...
Generating docs for file FilterCatalog.h...
Generating docs for file FilterCatalogEntry.h...
Generating docs for file FilterMatcherBase.h...
Generating docs for file FilterMatchers.h...
Generating docs for file Filters.h...
Generating docs for file FingerprintGenerator.h...
Generating docs for file Fingerprints.h...
Generating docs for file FingerprintUtil.h...
Generating docs for file FMCS.h...
Generating docs for file ForceField.h...
Generating docs for file FourthDimContrib.h...
Generating docs for file FPBReader.h...
Generating docs for file FragCatalogEntry.h...
Generating docs for file FragCatalogUtils.h...
Generating docs for file FragCatGenerator.h...
Generating docs for file FragCatParams.h...
Generating docs for file FragFPGenerator.h...
Generating docs for file Fragment.h...
Generating docs for file FragmentCatalogEntry.h...
Generating docs for file FragmentCatalogParams.h...
Generating docs for file FragmentCatalogUtils.h...
Generating docs for file FreeChemicalFeature.h...
Generating docs for file FunctionalGroupHierarchy.h...
Generating docs for file GasteigerCharges.h...
Generating docs for file GasteigerParams.h...
Generating docs for file GETAWAY.h...
Generating docs for file Graph.h...
Generating docs for file GraphMol.h...
Generating docs for file GreaterEqualQuery.h...
Generating docs for file GreaterQuery.h...
Generating docs for file Grid3D.h...
Generating docs for file GridUtils.h...
Generating docs for file hanoiSort.h...
Generating docs for file HierarchicalClusterPicker.h...
Generating docs for file import_array.h...
Generating docs for file InfoBitRanker.h...
Generating docs for file InfoGainFuncs.h...
Generating docs for file Invariant.h...
Generating docs for file Inversion.h...
Generating docs for file iterator_next.h...
Generating docs for file LeaderPicker.h...
Generating docs for file LessEqualQuery.h...
Generating docs for file LessQuery.h...
Generating docs for file Lipinski.h...
Generating docs for file LocaleSwitcher.h...
Generating docs for file MACCS.h...
Generating docs for file MatchTable.h...
Generating docs for file Matrix.h...
Generating docs for file MaximumCommonSubgraph.h...
Generating docs for file MaxMinPicker.h...
Generating docs for file Metal.h...
Generating docs for file MetricFuncs.h...
Generating docs for file MetricMatrixCalc.h...
Generating docs for file mf.h...
Generating docs for file MHFP.h...
Generating docs for file MMFF.h...
Generating docs for file MMPA.h...
Generating docs for file MolBundle.h...
Generating docs for file MolCatalog.h...
Generating docs for file MolCatalogEntry.h...
Generating docs for file MolCatalogParams.h...
Generating docs for file MolChemicalFeature.h...
Generating docs for file MolChemicalFeatureDef.h...
Generating docs for file MolChemicalFeatureFactory.h...
Generating docs for file MolData3Ddescriptors.h...
Generating docs for file MolDescriptors.h...
Generating docs for file MolDescriptors3D.h...
Generating docs for file MolDraw2D.h...
Generating docs for file MolDraw2DCairo.h...
Generating docs for file MolDraw2DDetails.h...
Generating docs for file MolDraw2DQt.h...
Generating docs for file MolDraw2DSVG.h...
Generating docs for file MolDraw2DUtils.h...
Generating docs for file MolDraw2Dwx.h...
Generating docs for file MolFileStereochem.h...
Generating docs for file MolFragmenter.h...
Generating docs for file MolHash.h...
Generating docs for file MolInterchange.h...
Generating docs for file MolOps.h...
Generating docs for file MolPickler.h...
Generating docs for file MolSGroupParsing.h...
Generating docs for file MolSGroupWriting.h...
Generating docs for file MolStandardize.h...
Generating docs for file MolSupplier.h...
Generating docs for file MolSurf.h...
Generating docs for file MolTransforms.h...
Generating docs for file MolWriters.h...
Generating docs for file MonomerInfo.h...
Generating docs for file MorganFingerprints.h...
Generating docs for file MorganGenerator.h...
Generating docs for file MORSE.h...
Generating docs for file MQN.h...
Generating docs for file /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:501: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:510: warning: Found unknown command '\overloadquery'
MultiFPBReader.h...
Generating docs for file MultiMolDraw2D.h...
Generating docs for file new_canon.h...
Generating docs for file nmmolhash.h...
Generating docs for file Nonbonded.h...
Generating docs for file Nonbonded.h...
Generating docs for file Normalize.h...
Generating docs for file NullQueryAlgebra.h...
Generating docs for file O3AAlignMolecules.h...
Generating docs for file OopBend.h...
Generating docs for file OrQuery.h...
Generating docs for file Params.h...
Generating docs for file Params.h...
Generating docs for file Pattern.h...
Generating docs for file PatternFactory.h...
Generating docs for file PBF.h...
Generating docs for file PeriodicTable.h...
Generating docs for file PMI.h...
Generating docs for file point.h...
Generating docs for file PositionConstraint.h...
Generating docs for file PositionConstraint.h...
Generating docs for file PowerEigenSolver.h...
Generating docs for file PreprocessRxn.h...
Generating docs for file primes.h...
Generating docs for file Property.h...
Generating docs for file ProximityBonds.h...
Generating docs for file pyint_api.h...
Generating docs for file PySequenceHolder.h...
Generating docs for file python.h...
Generating docs for file python_streambuf.h...
Generating docs for file Query.h...
Generating docs for file QueryAtom.h...
Generating docs for file QueryBond.h...
Generating docs for file QueryObjects.h...
Generating docs for file QueryOps.h...
Generating docs for file RandomSample.h...
Generating docs for file RandomSampleAllBBs.h...
Generating docs for file RangeQuery.h...
Generating docs for file Ranking.h...
Generating docs for file RDAny.h...
Generating docs for file RDConfig.h...
Generating docs for file RDDepictor.h...
Generating docs for file RDF.h...
Generating docs for file RDKitBase.h...
Generating docs for file RDKitFPGenerator.h...
Generating docs for file RDKitQueries.h...
Generating docs for file RDLog.h...
Generating docs for file RDProps.h...
Generating docs for file RDThreads.h...
Generating docs for file RDValue-doublemagic.h...
Generating docs for file RDValue-taggedunion.h...
Generating docs for file RDValue.h...
Generating docs for file Reaction.h...
Generating docs for file ReactionFingerprints.h...
Generating docs for file ReactionParser.h...
Generating docs for file ReactionPickler.h...
Generating docs for file ReactionRunner.h...
Generating docs for file ReactionUtils.h...
Generating docs for file ReCharge.h...
Generating docs for file ReducedGraphs.h...
Generating docs for file RegisterDescriptor.h...
Generating docs for file Resonance.h...
Generating docs for file RGroupDecomp.h...
Generating docs for file RingInfo.h...
Generating docs for file RingMatchTableSet.h...
Generating docs for file Rings.h...
Generating docs for file ROMol.h...
Generating docs for file RWMol.h...
Generating docs for file SanitException.h...
Generating docs for file SanitizeRxn.h...
Generating docs for file ScaffoldNetwork.h...
Generating docs for file Seed.h...
Generating docs for file SeedSet.h...
Generating docs for file SequenceParsers.h...
Generating docs for file SequenceWriters.h...
Generating docs for file SetQuery.h...
Generating docs for file ShapeEncoder.h...
Generating docs for file ShapeUtils.h...
Generating docs for file SLNAttribs.h...
Generating docs for file SLNParse.h...
Generating docs for file SLNParseOps.h...
Generating docs for file SmartsWrite.h...
Generating docs for file SmilesParse.h...
Generating docs for file SmilesParseOps.h...
Generating docs for file SmilesWrite.h...
Generating docs for file Snapshot.h...
Generating docs for file SparseBitVect.h...
Generating docs for file SparseIntVect.h...
Generating docs for file SquareMatrix.h...
Generating docs for file Stereo.h...
Generating docs for file StereoGroup.h...
Generating docs for file StreamOps.h...
Generating docs for file StretchBend.h...
Generating docs for file StripSmallFragments.h...
Generating docs for file StructChecker.h...
Generating docs for file StructCheckerOptions.h...
Generating docs for file Subgraphs.h...
Generating docs for file SubgraphUtils.h...
Generating docs for/<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h:118: warning: The following parameter of DistGeom::constructForceField(const BoundsMatrix &mmat, RDGeom::PointPtrVect &positions, const VECT_CHIRALSET &csets, double weightChiral=1.0, double weightFourthDim=0.1, std::map< std::pair< int, int >, double > *extraWeights=0, double basinSizeTol=5.0, boost::dynamic_bitset<> *fixedPts=nullptr) is not documented:
  parameter 'fixedPts'
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:154: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
 file SubstanceGroup.h...
Generating docs for file SubstructLibrary.h...
Generating docs for file SubstructLibrarySerialization.h...
Generating docs for file SubstructMatch.h...
Generating docs for file SubstructMatchCustom.h...
Generating docs for file SubstructureCache.h...
Generating docs for file SubstructUtils.h...
Generating docs for file SymmMatrix.h...
Generating docs for file Target.h...
Generating docs for file TargetMatch.h...
Generating docs for file Tautomer.h...
Generating docs for file Tautomer.h...
Generating docs for file TautomerCatalogEntry.h...
Generating docs for file TautomerCatalogParams.h...
Generating docs for file TautomerCatalogUtils.h...
Generating docs for file TopologicalTorsionGenerator.h...
Generating docs for file TorsionAngle.h...
Generating docs for file TorsionAngle.h...
Generating docs for file TorsionAngleM6.h...
Generating docs for file TorsionConstraint.h...
Generating docs for file TorsionConstraint.h...
Generating docs for file TorsionPreferences.h...
Generating docs for file Trajectory.h...
Generating docs for file Transform.h...
Generating docs for file Transform2D.h...
Generating docs for file Transform3D.h...
Generating docs for file TransformCatalogEntry.h...
Generating docs for file TransformCatalogParams.h...
Generating docs for file TransformCatalogUtils.h...
Generating docs for file TriangleSmooth.h...
Generating docs for file types.h...
Generating docs for file UFF.h...
Generating docs for file UniformGrid3D.h...
Generating docs for file USRDescriptor.h...
Generating docs for file Utilites.h...
Generating docs for file Utils.h...
Generating docs for file utils.h...
Generating docs for file Validate.h...
Generating docs for file Vector.h...
Generating docs for file versions.h...
Generating docs for file WHIM.h...
Generating docs for file XOrQuery.h...
Generating page documentation...
Generating docs for page deprecated...
Generating group documentation...
Generating class documentation...
Generating docs for compound BitVect...
Generating docs for compound Data3Ddescriptors...
Generating docs for compound DatastructsException...
Generating docs for compound ExplicitBitVect...
Generating docs for compound IndexErrorException...
Generating docs for compound KeyErrorException...
Generating docs for compound MolData3Ddescriptors...
Generating docs for compound PySequenceHolder...
Generating docs for compound SparseBitVect...
Generating docs for compound ValueErrorException...
Generating namespace index...
Generating docs for namespace BFGSOpt
Generating docs for namespace boost
Generating docs for namespace boost::logging
Generating docs for compound boost::logging::rdLogger...
Generating docs for namespace boost_adaptbx
Generating docs for namespace boost_adaptbx::python
Generating docs for compound boost_adaptbx::python::ostream...
Generating docs for compound boost_adaptbx::python::streambuf...
Generating docs for nested compound boost_adaptbx::python::streambuf::istream...
Generating docs for nested compound boost_adaptbx::python::streambuf::ostream...
Generating docs for compound boost_adaptbx::python::streambuf_capsule...
Generating docs for namespace ChemicalFeatures
Generating docs for compound ChemicalFeatures::ChemicalFeature...
Generating docs for compound ChemicalFeatures::FreeChemicalFeature...
Generating docs for namespace conrec
Generating docs for compound conrec::ConrecSegment...
Generating docs for namespace DistGeom
Generating docs for compound DistGeom::BoundsMatrix...
Generating docs for compound DistGeom::ChiralSet...
Generating docs for compound DistGeom::ChiralViolationContrib...
Generating docs for compound DistGeom::DistViolationContrib...
Generating docs for compound DistGeom::FourthDimContrib...
Generating docs for namespace ForceFields
Generating docs for compound ForceFields::ForceField...
Generating docs for compound ForceFields::ForceFieldContrib...
Generating docs for namespace ForceFields::CrystalFF
Generating docs for compound ForceFields::CrystalFF::CrystalFFDetails...
Generating docs for compound ForceFields::CrystalFF::TorsionAngleContri/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:30: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:40: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:37: warning: The following parameters of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:36: warning: The following parameter of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) is not documented:
  parameter 'mmffBondParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:59: warning: The following parameters of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, double chargeTerm, std::uint8_t dielModel, bool is1_4) are not documented:
  parameter 'chargeTerm'
  parameter 'dielModel'
  parameter 'is1_4'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::MMFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:31: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:41: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:34: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:46: warning: The following parameter of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) is not documented:
  parameter 'mmffTorParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:35: warning: The following parameter of ForceFields::MMFF::VdWContrib::VdWContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, const MMFFVdWRijstarEps *mmffVdWConstants) is not documented:
  parameter 'mmffVdWConstants'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:37: warning: The following parameters of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h:39: warning: The following parameter of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) is not documented:
  parameter 'oobForceScalingFactor'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::UFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
bM6...
Generating docs for namespace ForceFields::MMFF
Generating docs for compound ForceFields::MMFF::AngleBendContrib...
Generating docs for compound ForceFields::MMFF::AngleConstraintContrib...
Generating docs for compound ForceFields::MMFF::BondStretchContrib...
Generating docs for compound ForceFields::MMFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::MMFF::EleContrib...
Generating docs for compound ForceFields::MMFF::MMFFAngle...
Generating docs for compound ForceFields::MMFF::MMFFAngleCollection...
Generating docs for compound ForceFields::MMFF::MMFFAromCollection...
Generating docs for compound ForceFields::MMFF::MMFFBndkCollection...
Generating docs for compound ForceFields::MMFF::MMFFBond...
Generating docs for compound ForceFields::MMFF::MMFFBondCollection...
Generating docs for compound ForceFields::MMFF::MMFFChg...
Generating docs for compound ForceFields::MMFF::MMFFChgCollection...
Generating docs for compound ForceFields::MMFF::MMFFCovRadPauEle...
Generating docs for compound ForceFields::MMFF::MMFFCovRadPauEleCollection...
Generating docs for compound ForceFields::MMFF::MMFFDef...
Generating docs for compound ForceFields::MMFF::MMFFDefCollection...
Generating docs for compound ForceFields::MMFF::MMFFDfsbCollection...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurie...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurieCollection...
Generating docs for compound ForceFields::MMFF::MMFFOop...
Generating docs for compound ForceFields::MMFF::MMFFOopCollection...
Generating docs for compound ForceFields::MMFF::MMFFPBCI...
Generating docs for compound ForceFields::MMFF::MMFFPBCICollection...
Generating docs for compound ForceFields::MMFF::MMFFProp...
Generating docs for compound ForceFields::MMFF::MMFFPropCollection...
Generating docs for compound ForceFields::MMFF::MMFFStbn...
Generating docs for compound ForceFields::MMFF::MMFFStbnCollection...
Generating docs for compound ForceFields::MMFF::MMFFTor...
Generating docs for compound ForceFields::MMFF::MMFFTorCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdW...
Generating docs for compound ForceFields::MMFF::MMFFVdWCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdWRijstarEps...
Generating docs for compound ForceFields::MMFF::OopBendContrib...
Generating docs for compound ForceFields::MMFF::PositionConstraintContrib...
Generating docs for compound ForceFields::MMFF::StretchBendContrib...
Generating docs for compound ForceFields::MMFF::TorsionAngleContrib...
Generating docs for compound ForceFields::MMFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::MMFF::VdWContrib...
Generating docs for namespace ForceFields::MMFF::Utils
Generating docs for namespace ForceFields::UFF
Generating docs for compound ForceFields::UFF::AngleBendContrib...
Generating docs for compound ForceFields::UFF::AngleConstraintContrib...
Generating docs for compound ForceFields::UFF::AtomicParams...
Generating docs for compound ForceFields::UFF::BondStretchContrib...
Generating docs for compound ForceFields::UFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::UFF::InversionContrib...
Generating docs for compound ForceFields::UFF::ParamCollection...
Generating docs for compound ForceFields::UFF::PositionConstraintContrib...
Generating docs for compound ForceFields::UFF::TorsionAngleContrib...
Generating docs for compound ForceFields::UFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::UFF::UFFAngle...
Generating docs for compound ForceFields::UFF::UFFBond...
Generating docs for compound ForceFields::UFF::UFFInv...
Generating docs for compound ForceFields::UFF::UFFTor...
Generating docs for compound ForceFields::UFF::UFFVdW...
Generating docs for compound ForceFields::UFF::vdWContrib...
Generating docs for namespace ForceFields::UFF::Params
Generating docs for namespace ForceFields::UFF::Utils
Generating docs for namespace Invar
Generating docs for compound Invar::Invariant...
Generating docs for namespace MolTransforms
Genera/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:74: warning: The following parameter of RDDepict::compute2DCoords(RDKit::ROMol &mol, const RDGeom::INT_POINT2D_MAP *coordMap=0, bool canonOrient=false, bool clearConfs=true, unsigned int nFlipsPerSample=0, unsigned int nSamples=0, int sampleSeed=0, bool permuteDeg4Nodes=false, bool forceRDKit=false) is not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:129: warning: The following parameter of RDDepict::compute2DCoordsMimicDistMat(RDKit::ROMol &mol, const DOUBLE_SMART_PTR *dmat=0, bool canonOrient=true, bool clearConfs=true, double weightDistMat=0.5, unsigned int nFlipsPerSample=3, unsigned int nSamples=100, int sampleSeed=25, bool permuteDeg4Nodes=true, bool forceRDKit=false) is not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:161: warning: The following parameter of RDDepict::generateDepictionMatching2DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=static_cast< RDKit::ROMol * >(0), bool acceptFailure=false, bool forceRDKit=false) is not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:168: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:188: warning: The following parameters of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'referencePattern'
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:501: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:510: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:223: warning: The following parameter of RDKit::addSubstanceGroup(ROMol &mol, SubstanceGroup sgroup) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:104: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:110: warning: The following parameter of RDKit::HELMToMol(const char *helm, bool sanitize=true) is not documented:
  parameter 'helm'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:105: warning: The following parameter of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=0, ExplicitBitVect *setOnlyBits=0, bool branchedPaths=true, const std::vector< std::uint32_t > *fromAtoms=0) is not documented:
  parameter 'fromAtoms'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:501: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:510: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:61: warning: argument 'line' from the argument list of RDKit::MolDataStreamToMol has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:151: warning: argument 'doRandom' of command @param is not found in the argument list of RDKit::MolFragmentToCXSmiles(const ROMol &mol, const std::vector< int > &atomsToUse, const std::vector< int > *bondsToUse=0, const std::vector< std::string > *atomSymbols=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:98: warning: argument 'doRandom' of command @param is not found in the argument list of RDKit::MolFragmentToSmiles(const ROMol &mol, const std::vector< int > &atomsToUse, const std::vector< int > *bondsToUse=0, const std::vector< std::string > *atomSymbols=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:145: warning: The following parameter of RDKit::MolToCXSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) is not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:318: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:330: warning: The following parameter of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) is not documented:
  parameter 'fname'
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:74: warning: The following parameter of RDKit::MolToSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) is not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:25: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=0, const std::vector< std::uint32_t > *fromAtoms=0, std::vector< std::vector< std::uint32_t >> *atomBits=0, std::map< std::uint32_t, std::vector< std::vector< int >>> *bitInfo=0)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:53: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=0, const std::vector< std::uint32_t > *fromAtoms=0, std::vector< std::vector< std::uint32_t >> *atomBits=0, std::map< std::uint32_t, std::vector< std::vector< int >>> *bitInfo=0) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:97: warning: The following parameter of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) is not documented:
  parameter 'product'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h:113: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:63: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:77: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:55: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:63: warning: The following parameter of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:68: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:76: warning: The following parameter of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:145: warning: The following parameter of RDKit::SubstructMatch(T1 &mol, const T2 &query, std::vector< MatchVectType > &matchVect, bool uniquify=true, bool recursionPossible=true, bool useChirality=false, bool useQueryQueryMatches=false, unsigned int maxMatches=1000, int numThreads=1) is not documented:
  parameter 'numThreads'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:109: warning: The following parameter of RDKit::AtomEnvironment::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const=0 is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:208: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:223: warning: The following parameter of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const is not documented:
  parameter 'numProducts'
ting docs for namespace Queries
Generating docs for compound Queries::AndQuery...
Generating docs for compound Queries::EqualityQuery...
Generating docs for compound Queries::GreaterEqualQuery...
Generating docs for compound Queries::GreaterQuery...
Generating docs for compound Queries::Int2Type...
Generating docs for compound Queries::LessEqualQuery...
Generating docs for compound Queries::LessQuery...
Generating docs for compound Queries::OrQuery...
Generating docs for compound Queries::Query...
Generating docs for compound Queries::RangeQuery...
Generating docs for compound Queries::SetQuery...
Generating docs for compound Queries::XOrQuery...
Generating docs for namespace Rankers
Generating docs for compound Rankers::argless...
Generating docs for compound Rankers::pairGreater...
Generating docs for compound Rankers::pairLess...
Generating docs for namespace RDCatalog
Generating docs for compound RDCatalog::Catalog...
Generating docs for compound RDCatalog::CatalogEntry...
Generating docs for compound RDCatalog::CatalogParams...
Generating docs for compound RDCatalog::HierarchCatalog...
Generating docs for nested compound RDCatalog::HierarchCatalog::vertex_entry_t...
Generating docs for namespace RDDataManip
Generating docs for compound RDDataManip::MetricMatrixCalc...
Generating docs for namespace RDDepict
Generating docs for compound RDDepict::DepictException...
Generating docs for compound RDDepict::EmbeddedAtom...
Generating docs for compound RDDepict::EmbeddedFrag...
Generating docs for compound RDDepict::gtIIPair...
Generating docs for namespace RDFeatures
Generating docs for compound RDFeatures::ExplicitFeature...
Generating docs for compound RDFeatures::ImplicitFeature...
Generating docs for namespace RDGeom
Generating docs for compound RDGeom::Grid3D...
Generating docs for compound RDGeom::GridException...
Generating docs for compound RDGeom::Point...
Generating docs for compound RDGeom::Point2D...
Generating docs for compound RDGeom::Point3D...
Generating docs for compound RDGeom::PointND...
Generating docs for compound RDGeom::Transform2D...
Generating docs for compound RDGeom::Transform3D...
Generating docs for compound RDGeom::UniformGrid3D...
Generating docs for namespace RDInfoTheory
Generating docs for compound RDInfoTheory::BitCorrMatGenerator...
Generating docs for compound RDInfoTheory::InfoBitRanker...
Generating docs for namespace RDKit
Generating docs for compound RDKit::AdditionalOutput...
Generating docs for compound RDKit::AromaticAtomIterator_...
Generating docs for compound RDKit::Atom...
Generating docs for compound RDKit::AtomEnvironment...
Generating docs for compound RDKit::AtomEnvironmentGenerator...
Generating docs for compound RDKit::atomicData...
Generating docs for compound RDKit::AtomInvariantsGenerator...
Generating docs for compound RDKit::AtomIterator_...
Generating docs for compound RDKit::AtomKekulizeException...
Generating docs for compound RDKit::AtomMonomerInfo...
Generating docs for compound RDKit::AtomPDBResidueInfo...
Generating docs for compound RDKit::AtomRingQuery...
Generating docs for compound RDKit::AtomSanitizeException...
Generating docs for compound RDKit::AtomValenceException...
Generating docs for compound RDKit::BadFileException...
Generating docs for compound RDKit::Bond...
Generating docs for compound RDKit::BondInvariantsGenerator...
Generating docs for compound RDKit::BondIterator_...
Generating docs for compound RDKit::CachedMolHolder...
Generating docs for compound RDKit::CachedSmilesMolHolder...
Generating docs for compound RDKit::CachedTrustedSmilesMolHolder...
Generating docs for compound RDKit::CartesianProductStrategy...
Generating docs for compound RDKit::charptr_functor...
Generating docs for compound RDKit::ChemicalReaction...
Generating docs for compound RDKit::ChemicalReactionException...
Generating docs for compound RDKit::ChemicalReactionParserException...
Generating docs for compound RDKit::Conformer...
Generating docs for compound RDKit::ConformerException...
Generating docs for compound RDKit::ConstBondIterator_...
Generating docs for co/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: The following parameter of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:105: warning: The following parameter of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:273: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecule has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:273: warning: The following parameter of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=nullptr, const std::map< int, DrawColour > *highlight_bond_map=nullptr, const std::map< int, double > *highlight_radii=nullptr, int confId=-1) is not documented:
  parameter 'highlight_bonds'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:325: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:325: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:325: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:350: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecules has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:350: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:316: warning: The following parameter of RDKit::MolDraw2D::drawMoleculeWithHighlights(const ROMol &mol, const std::string &legend, const std::map< int, std::vector< DrawColour >> &highlight_atom_map, const std::map< int, std::vector< DrawColour >> &highlight_bond_map, const std::map< int, double > &highlight_radii, const std::map< int, int > &highlight_linewidth_multipliers, int confId=-1) is not documented:
  parameter 'highlight_linewidth_multipliers'
mpound RDKit::CustomPropHandler...
Generating docs for compound RDKit::CXXAtomIterator...
Generating docs for nested compound RDKit::CXXAtomIterator::CXXAtomIter...
Generating docs for compound RDKit::CXXBondIterator...
Generating docs for nested compound RDKit::CXXBondIterator::CXXBondIter...
Generating docs for compound RDKit::DataStructsExplicitBitVecPropHandler...
Generating docs for compound RDKit::Dict...
Generating docs for nested compound RDKit::Dict::Pair...
Generating docs for compound RDKit::DiscreteDistMat...
Generating docs for compound RDKit::DiscreteValueVect...
Generating docs for compound RDKit::DrawColour...
Generating docs for compound RDKit::EnumerateLibrary...
Generating docs for compound RDKit::EnumerateLibraryBase...
Generating docs for compound RDKit::EnumerationParams...
Generating docs for compound RDKit::EnumerationStrategyBase...
Generating docs for compound RDKit::EnumerationStrategyException...
Generating docs for compound RDKit::EvenSamplePairsStrategy...
Generating docs for compound RDKit::ExclusionList...
Generating docs for compound RDKit::FeatureFileParseException...
Generating docs for compound RDKit::FileParseException...
Generating docs for compound RDKit::FilterCatalog...
Generating docs for compound RDKit::FilterCatalogEntry...
Generating docs for compound RDKit::FilterCatalogParams...
Generating docs for compound RDKit::FilterData_t...
Generating docs for compound RDKit::FilterHierarchyMatcher...
Generating docs for compound RDKit::FilterMatch...
Generating docs for compound RDKit::FilterMatcherBase...
Generating docs for compound RDKit::FilterProperty_t...
Generating docs for compound RDKit::FingerprintArguments...
Generating docs for compound RDKit::FingerprintGenerator...
Generating docs for compound RDKit::ForwardSDMolSupplier...
Generating docs for compound RDKit::FPBReader...
Generating docs for compound RDKit::FPHolderBase...
Generating docs for compound RDKit::FragCatalogEntry...
Generating docs for compound RDKit::FragCatGenerator...
Generating docs for compound RDKit::FragCatParams...
Generating docs for compound RDKit::FragFPGenerator...
Generating docs for compound RDKit::GasteigerParams...
Generating docs for compound RDKit::HasPropQuery...
Generating docs for compound RDKit::HasPropWithValueQuery...
Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, ExplicitBitVect >...
Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, std::string >...
Generating docs for compound RDKit::HeteroatomIterator_...
Generating docs for compound RDKit::KekulizeException...
Generating docs for compound RDKit::larger_of...
Generating docs for compound RDKit::ltDouble...
Generating docs for compound RDKit::MatchingAtomIterator_...
Generating docs for compound RDKit::MCSAtomCompareParameters...
Generating docs for compound RDKit::MCSBondCompareParameters...
Generating docs for compound RDKit::MCSParameters...
Generating docs for compound RDKit::MCSProgressData...
Generating docs for compound RDKit::MCSResult...
Generating docs for compound RDKit::MolBundle...
Generating docs for compound RDKit::MolCatalogEntry...
Generating docs for compound RDKit::MolCatalogParams...
Generating docs for compound RDKit::MolChemicalFeature...
Generating docs for compound RDKit::MolChemicalFeatureDef...
Generating docs for compound RDKit::MolChemicalFeatureFactory...
Generating docs for compound RDKit::MolDraw2D...
Generating docs for compound RDKit::MolDraw2DCairo...
Generating docs for compound RDKit::MolDraw2DQt...
Generating docs for compound RDKit::MolDraw2DSVG...
Generating docs for compound RDKit::MolDraw2Dwx...
Generating docs for compound RDKit::MolDrawOptions...
Generating docs for compound RDKit::MolFileUnhandledFeatureException...
Generating docs for compound RDKit::MolHolder...
Generating docs for compound RDKit::MolHolderBase...
Generating docs for compound RDKit::MolPickler...
Generating docs for compound RDKit::MolPicklerException...
Generating docs for compound RDKit::MolSanitizeException...
Generating docs for compound RDKit::MolSupplier...
Generating docs /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h:55: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: The following parameter of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h:103: warning: The following parameter of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h:121: warning: The following parameter of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< std::uint32_t > *fromAtoms=0, const std::vector< std::uint32_t > *ignoreAtoms=0, const std::vector< std::uint32_t > *atomInvariants=0, bool includeChirality=false, bool use2D=true, int confId=-1) is not documented:
  parameter 'confId'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h:77: warning: The following parameter of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) is not documented:
  parameter 'includeChirality'
/<<PKGBUILDDIR>>/Code/GraphMol/Canon.h:114: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=false, bool doRandom=false) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:44: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:52: warning: The following parameter of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) is not documented:
  parameter 'useStrictDefinition'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h:81: warning: The following parameter of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int >> &atomIds, int confId=-1) is not documented:
  parameter 'atomIds'
for compound RDKit::MolWriter...
Generating docs for compound RDKit::MultiFPBReader...
Generating docs for compound RDKit::MultiMolDraw2D...
Generating docs for compound RDKit::PatternHolder...
Generating docs for compound RDKit::PDBMolSupplier...
Generating docs for compound RDKit::PDBWriter...
Generating docs for compound RDKit::PeriodicTable...
Generating docs for compound RDKit::QueryAtom...
Generating docs for compound RDKit::QueryAtomIterator_...
Generating docs for compound RDKit::QueryBond...
Generating docs for compound RDKit::RandomSampleAllBBsStrategy...
Generating docs for compound RDKit::RandomSampleStrategy...
Generating docs for compound RDKit::RDAny...
Generating docs for compound RDKit::RDProps...
Generating docs for compound RDKit::RDValue...
Generating docs for compound RDKit::ReactionFingerprintParams...
Generating docs for compound RDKit::ReactionPickler...
Generating docs for compound RDKit::ReactionPicklerException...
Generating docs for compound RDKit::RecursiveStructureQuery...
Generating docs for compound RDKit::ResonanceMolSupplier...
Generating docs for compound RDKit::RGroupDecomposition...
Generating docs for compound RDKit::RGroupDecompositionParameters...
Generating docs for compound RDKit::RingInfo...
Generating docs for compound RDKit::ROMol...
Generating docs for compound RDKit::RWMol...
Generating docs for compound RDKit::RxnSanitizeException...
Generating docs for compound RDKit::SDMolSupplier...
Generating docs for compound RDKit::SDWriter...
Generating docs for compound RDKit::SLNParseException...
Generating docs for compound RDKit::SmartsMatcher...
Generating docs for compound RDKit::SmilesMolSupplier...
Generating docs for compound RDKit::SmilesParseException...
Generating docs for compound RDKit::SmilesParserParams...
Generating docs for compound RDKit::SmilesWriter...
Generating docs for compound RDKit::Snapshot...
Generating docs for compound RDKit::SparseIntVect...
Generating docs for compound RDKit::StereoGroup...
Generating docs for compound RDKit::StringRect...
Generating docs for compound RDKit::SubstanceGroup...
Generating docs for nested compound RDKit::SubstanceGroup::AttachPoint...
Generating docs for nested compound RDKit::SubstanceGroup::CState...
Generating docs for compound RDKit::SubstanceGroupException...
Generating docs for compound RDKit::SubstructLibrary...
Generating docs for compound RDKit::SubstructMatchParameters...
Generating docs for compound RDKit::TDTMolSupplier...
Generating docs for compound RDKit::TDTWriter...
Generating docs for compound RDKit::Trajectory...
Generating docs for compound RDKit::UnimplementedFPException...
Generating docs for namespace RDKit::AtomPair
Generating docs for compound RDKit::AtomPair::AtomPairArguments...
Generating docs for compound RDKit::AtomPair::AtomPairAtomEnv...
Generating docs for compound RDKit::AtomPair::AtomPairAtomInvGenerator...
Generating docs for compound RDKit::AtomPair::AtomPairEnvGenerator...
Generating docs for namespace RDKit::AtomPairs
Generating docs for namespace RDKit::Canon
Generating docs for compound RDKit::Canon::AtomCompareFunctor...
Generating docs for compound RDKit::Canon::bondholder...
Generating docs for compound RDKit::Canon::canon_atom...
Generating docs for compound RDKit::Canon::ChiralAtomCompareFunctor...
Generating docs for compound RDKit::Canon::MolStackElem...
Generating docs for compound RDKit::Canon::MolStackUnion...
Generating docs for compound RDKit::Canon::SpecialChiralityAtomCompareFunctor...
Generating docs for compound RDKit::Canon::SpecialSymmetryAtomCompareFunctor...
Generating docs for namespace RDKit::common_properties
Generating docs for namespace RDKit::constants
Generating docs for namespace RDKit::Descriptors
Generating docs for compound RDKit::Descriptors::CrippenParamCollection...
Generating docs for compound RDKit::Descriptors::CrippenParams...
Generating docs for compound RDKit::Descriptors::Properties...
Generating docs for compound RDKit::Descriptors::PropertyFunctor...
Generating docs for namespace RDKit::Descriptors::detail
Generating docs for namespace RDK/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: The following parameter of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: The following parameter of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: The following parameter of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:103: warning: found </tt> tag without matching <tt>
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:116: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::CreateShingling(const ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=true, unsigned char min_radius=1) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:143: warning: found </tt> tag without matching <tt>
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:156: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::Encode(ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=true, unsigned char min_radius=1) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:201: warning: found </tt> tag without matching <tt>
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MHFP.h:216: warning: The following parameter of RDKit::MHFPFingerprints::MHFPEncoder::EncodeSECFP(ROMol &mol, unsigned char radius=3, bool rings=true, bool isomeric=false, bool kekulize=true, unsigned char min_radius=1, size_t length=2048) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:36: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR >> &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:57: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR >> &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:711: warning: The following parameter of RDKit::MolOps::getAdjacencyMatrix(const ROMol &mol, bool useBO=false, int emptyVal=0, bool force=false, const char *propNamePrefix=0, const boost::dynamic_bitset<> *bondsToUse=0) is not documented:
  parameter 'bondsToUse'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:297: warning: The following parameter of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false) is not documented:
  parameter 'mergeUnmappedOnly'
it::detail
Generating docs for namespace RDKit::DGeomHelpers
Generating docs for compound RDKit::DGeomHelpers::EmbedParameters...
Generating docs for namespace RDKit::DTags
Generating docs for namespace RDKit::EnumerationStrategyPickler
Generating docs for namespace RDKit::EnumerationTypes
Generating docs for namespace RDKit::FileParserUtils
Generating docs for namespace RDKit::FilterMatchOps
Generating docs for compound RDKit::FilterMatchOps::And...
Generating docs for compound RDKit::FilterMatchOps::Not...
Generating docs for compound RDKit::FilterMatchOps::Or...
Generating docs for namespace RDKit::FMCS
Generating docs for compound RDKit::FMCS::Composition2N...
Generating docs for compound RDKit::FMCS::DuplicatedSeedCache...
Generating docs for nested compound RDKit::FMCS::DuplicatedSeedCache::TKey...
Generating docs for compound RDKit::FMCS::ExecStatistics...
Generating docs for compound RDKit::FMCS::Graph...
Generating docs for compound RDKit::FMCS::MaximumCommonSubgraph...
Generating docs for compound RDKit::FMCS::MolFragment...
Generating docs for compound RDKit::FMCS::NewBond...
Generating docs for compound RDKit::FMCS::RingMatchTableSet...
Generating docs for compound RDKit::FMCS::Seed...
Generating docs for compound RDKit::FMCS::SeedSet...
Generating docs for compound RDKit::FMCS::SubstructureCache...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::HashKey...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::KeyNumericMetrics...
Generating docs for compound RDKit::FMCS::Target...
Generating docs for compound RDKit::FMCS::TargetMatch...
Generating docs for compound RDKit::FMCS::TArray2D...
Generating docs for namespace RDKit::ForceFieldsHelper
Generating docs for namespace RDKit::ForceFieldsHelper::detail
Generating docs for namespace RDKit::Local
Generating docs for namespace RDKit::MACCSFingerprints
Generating docs for namespace RDKit::MHFPFingerprints
Generating docs for compound RDKit::MHFPFingerprints::MHFPEncoder...
Generating docs for namespace RDKit::MHFPFingerprints::FNV
Generating docs for namespace RDKit::MMFF
Generating docs for compound RDKit::MMFF::MMFFAtomProperties...
Generating docs for compound RDKit::MMFF::MMFFMolProperties...
Generating docs for namespace RDKit::MMFF::DefaultParameters
Generating docs for namespace RDKit::MMFF::Tools
Generating docs for compound RDKit::MMFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::MMPA
Generating docs for namespace RDKit::MolAlign
Generating docs for compound RDKit::MolAlign::LAP...
Generating docs for compound RDKit::MolAlign::MolAlignException...
Generating docs for compound RDKit::MolAlign::MolHistogram...
Generating docs for compound RDKit::MolAlign::O3A...
Generating docs for compound RDKit::MolAlign::O3AConstraint...
Generating docs for compound RDKit::MolAlign::O3AConstraintVect...
Generating docs for compound RDKit::MolAlign::O3AFuncData...
Generating docs for compound RDKit::MolAlign::SDM...
Generating docs for namespace RDKit::MolDraw2D_detail
Generating docs for namespace RDKit::MolDraw2DUtils
Generating docs for compound RDKit::MolDraw2DUtils::ContourParams...
Generating docs for namespace RDKit::MolFragmenter
Generating docs for compound RDKit::MolFragmenter::FragmenterBondType...
Generating docs for namespace RDKit::MolHash
Generating docs for compound RDKit::MolHash::HashSet...
Generating docs for namespace RDKit::MolInterchange
Generating docs for compound RDKit::MolInterchange::JSONParseParameters...
Generating docs for namespace RDKit::MolOps
Generating docs for compound RDKit::MolOps::AdjustQueryParameters...
Generating docs for compound RDKit::MolOps::RemoveHsParameters...
Generating docs for namespace RDKit::MolShapes
Generating docs for namespace RDKit::MolStandardize
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogParams...
Generating docs for compound RDKit::MolStandardize::AllowedAtomsValidation...
Generating docs for compound RDKit::MolStandardize::ChargeCorrection...
Gen/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:190: warning: argument 'OutputType' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:190: warning: argument 'radiu' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'countSimulation' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'includeChirality' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'onlyNonzeroInvariants' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: The following parameter of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false) is not documented:
  parameter 'radius'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:151: warning: The following parameter of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h:157: warning: The following parameter of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< boost::uint32_t > *invariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=0, bool includeRedundantEnvironments=false) is not documented:
  parameter 'nBits'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:76: warning: The following parameter of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:34: warning: The following parameter of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<>> *atomTypes=0) is not documented:
  parameter 'atomTypes'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:126: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:157: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
erating docs for compound RDKit::MolStandardize::CleanupParameters...
Generating docs for compound RDKit::MolStandardize::DisallowedAtomsValidation...
Generating docs for compound RDKit::MolStandardize::FragmentCatalogEntry...
Generating docs for compound RDKit::MolStandardize::FragmentCatalogParams...
Generating docs for compound RDKit::MolStandardize::FragmentRemover...
Generating docs for compound RDKit::MolStandardize::FragmentValidation...
Generating docs for compound RDKit::MolStandardize::IsotopeValidation...
Generating docs for compound RDKit::MolStandardize::LargestFragmentChooser...
Generating docs for nested compound RDKit::MolStandardize::LargestFragmentChooser::Largest...
Generating docs for compound RDKit::MolStandardize::MetalDisconnector...
Generating docs for compound RDKit::MolStandardize::MolVSValidation...
Generating docs for compound RDKit::MolStandardize::MolVSValidations...
Generating docs for compound RDKit::MolStandardize::NeutralValidation...
Generating docs for compound RDKit::MolStandardize::NoAtomValidation...
Generating docs for compound RDKit::MolStandardize::Normalizer...
Generating docs for nested compound RDKit::MolStandardize::Normalizer::Product...
Generating docs for compound RDKit::MolStandardize::RDKitValidation...
Generating docs for compound RDKit::MolStandardize::Reionizer...
Generating docs for compound RDKit::MolStandardize::TautomerCatalogEntry...
Generating docs for compound RDKit::MolStandardize::TautomerCatalogParams...
Generating docs for compound RDKit::MolStandardize::TautomerEnumerator...
Generating docs for compound RDKit::MolStandardize::TautomerTransform...
Generating docs for compound RDKit::MolStandardize::TransformCatalogEntry...
Generating docs for compound RDKit::MolStandardize::TransformCatalogParams...
Generating docs for compound RDKit::MolStandardize::Uncharger...
Generating docs for compound RDKit::MolStandardize::ValidationErrorInfo...
Generating docs for compound RDKit::MolStandardize::ValidationMethod...
Generating docs for namespace RDKit::MolStandardize::TautomerScoringFunctions
Generating docs for namespace RDKit::MorganFingerprint
Generating docs for compound RDKit::MorganFingerprint::MorganArguments...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomEnv...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganBondInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganEnvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganFeatureAtomInvGenerator...
Generating docs for namespace RDKit::MorganFingerprints
Generating docs for compound RDKit::MorganFingerprints::ss_matcher...
Generating docs for namespace RDKit::PicklerOps
Generating docs for namespace RDKit::RDKitFP
Generating docs for compound RDKit::RDKitFP::RDKitFPArguments...
Generating docs for compound RDKit::RDKitFP::RDKitFPAtomEnv...
Generating docs for compound RDKit::RDKitFP::RDKitFPAtomInvGenerator...
Generating docs for compound RDKit::RDKitFP::RDKitFPEnvGenerator...
Generating docs for namespace RDKit::RDKitFPUtils
Generating docs for namespace RDKit::RDTypeTag
Generating docs for namespace RDKit::RDTypeTag::detail
Generating docs for compound RDKit::RDTypeTag::detail::Value...
Generating docs for namespace RDKit::ReactionRunnerUtils
Generating docs for namespace RDKit::ReducedGraphs
Generating docs for namespace RDKit::RxnOps
Generating docs for namespace RDKit::ScaffoldNetwork
Generating docs for compound RDKit::ScaffoldNetwork::NetworkEdge...
Generating docs for compound RDKit::ScaffoldNetwork::ScaffoldNetwork...
Generating docs for compound RDKit::ScaffoldNetwork::ScaffoldNetworkParams...
Generating docs for namespace RDKit::ScaffoldNetwork::detail
Generating docs for namespace RDKit::SGroupParsing
Generating docs for namespace RDKit::SGroupWriting
Generating docs for namespace RDKit::SLNParse
Generating docs for compound RDKit::SLNParse::AttribType...
Generating docs for namespace RDKit::SmartsWrite
Generating docs for namespace RDKit::Smi/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:88: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:109: warning: The following parameter of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) is not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:34: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments< OutputType >::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:44: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) is not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:57: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h:80: warning: The following parameter of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const is not documented:
  parameter 'distMat'
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:46: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:46: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:97: warning: The following parameters of RDPickers::LeaderPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize, const RDKit::INT_VECT &firstPicks, double threshold, int nthreads) const are not documented:
  parameter 'threshold'
  parameter 'nthreads'
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:43: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:43: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
lesWrite
Generating docs for namespace RDKit::StructureCheck
Generating docs for compound RDKit::StructureCheck::AugmentedAtom...
Generating docs for compound RDKit::StructureCheck::ChargeFix...
Generating docs for compound RDKit::StructureCheck::IncEntry...
Generating docs for compound RDKit::StructureCheck::Ligand...
Generating docs for compound RDKit::StructureCheck::Neighbourhood...
Generating docs for compound RDKit::StructureCheck::PathEntry...
Generating docs for compound RDKit::StructureCheck::StructChecker...
Generating docs for compound RDKit::StructureCheck::StructCheckerOptions...
Generating docs for compound RDKit::StructureCheck::StructCheckTautomer...
Generating docs for namespace RDKit::Subgraphs
Generating docs for namespace RDKit::SubstanceGroupChecks
Generating docs for namespace RDKit::TopologicalTorsion
Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionArguments...
Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv...
Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionEnvGenerator...
Generating docs for namespace RDKit::UFF
Generating docs for namespace RDKit::UFF::Tools
Generating docs for compound RDKit::UFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::Utils
Generating docs for compound RDKit::Utils::LocaleSwitcher...
Generating docs for namespace RDKit::Utils::detail
Generating docs for namespace RDLog
Generating docs for namespace RDNumeric
Generating docs for compound RDNumeric::Matrix...
Generating docs for compound RDNumeric::SquareMatrix...
Generating docs for compound RDNumeric::SymmMatrix...
Generating docs for compound RDNumeric::Vector...
Generating docs for namespace RDNumeric::Alignments
Generating docs for namespace RDNumeric::EigenSolvers
Generating docs for namespace RDPickers
Generating docs for compound RDPickers::DistPicker...
Generating docs for compound RDPickers::HierarchicalClusterPicker...
Generating docs for compound RDPickers::LeaderPicker...
Generating docs for compound RDPickers::LeaderPickerState...
Generating docs for compound RDPickers::MaxMinPicker...
Generating docs for compound RDPickers::MaxMinPickInfo...
Generating docs for namespace RingUtils
Generating docs for namespace SmilesParseOps
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
lookup cache used 16575/65536 hits=136180 misses=18054
finished...
(cd /<<PKGBUILDDIR>>/Docs/Book; RDBASE=/<<PKGBUILDDIR>> /usr/bin/make html)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book'
mkdir -p _build/html/cppapi
cp -r /<<PKGBUILDDIR>>/Code/docs/*  _build/html/cppapi
cp -r C++Examples  _build/html/
sphinx-build -b html -d _build/doctrees   . _build/html
Running Sphinx v3.3.1
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 308 source files that are out of date
updating environment: [new config] 308 added, 0 changed, 0 removed
reading sources... [  0%] BackwardsIncompatibleChanges
reading sources... [  0%] Cartridge
reading sources... [  0%] GettingStartedInC++
reading sources... [  1%] GettingStartedInPython
reading sources... [  1%] Install
reading sources... [  1%] Overview
reading sources... [  2%] RDKit_Book
reading sources... [  2%] api-docs
reading sources... [  2%] data/README
reading sources... [  3%] index
reading sources... [  3%] source/modules
reading sources... [  3%] source/rdkit
reading sources... [  4%] source/rdkit.Avalon
reading sources... [  4%] source/rdkit.Avalon.pyAvalonTools
reading sources... [  4%] source/rdkit.Chem
reading sources... [  5%] source/rdkit.Chem.AllChem
reading sources... [  5%] source/rdkit.Chem.AtomPairs
reading sources... [  5%] source/rdkit.Chem.AtomPairs.Pairs
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Sheridan
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Torsions
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Utils
reading sources... [  7%] source/rdkit.Chem.BRICS
reading sources... [  7%] source/rdkit.Chem.BuildFragmentCatalog
reading sources... [  7%] source/rdkit.Chem.ChemUtils
reading sources... [  8%] source/rdkit.Chem.ChemUtils.AlignDepict
reading sources... [  8%] source/rdkit.Chem.ChemUtils.BulkTester
reading sources... [  8%] source/rdkit.Chem.ChemUtils.DescriptorUtilities
reading sources... [  9%] source/rdkit.Chem.ChemUtils.SDFToCSV
reading sources... [  9%] source/rdkit.Chem.ChemUtils.TemplateExpand
reading sources... [  9%] source/rdkit.Chem.ChemicalFeatures
reading sources... [ 10%] source/rdkit.Chem.ChemicalForceFields
reading sources... [ 10%] source/rdkit.Chem.Crippen
reading sources... [ 10%] source/rdkit.Chem.DSViewer
reading sources... [ 11%] source/rdkit.Chem.Descriptors
reading sources... [ 11%] source/rdkit.Chem.Descriptors3D
reading sources... [ 11%] source/rdkit.Chem.Draw
reading sources... [ 12%] source/rdkit.Chem.Draw.IPythonConsole
reading sources... [ 12%] source/rdkit.Chem.Draw.MolDrawing
reading sources... [ 12%] source/rdkit.Chem.Draw.SimilarityMaps
reading sources... [ 12%] source/rdkit.Chem.Draw.aggCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.cairoCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.canvasbase
reading sources... [ 13%] source/rdkit.Chem.Draw.mplCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.qtCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.rdMolDraw2D
reading sources... [ 14%] source/rdkit.Chem.EState
reading sources... [ 15%] source/rdkit.Chem.EState.AtomTypes
reading sources... [ 15%] source/rdkit.Chem.EState.EState
reading sources... [ 15%] source/rdkit.Chem.EState.EState_VSA
reading sources... [ 16%] source/rdkit.Chem.EState.Fingerprinter
reading sources... [ 16%] source/rdkit.Chem.EnumerateHeterocycles
reading sources... [ 16%] source/rdkit.Chem.EnumerateStereoisomers
reading sources... [ 17%] source/rdkit.Chem.FastSDMolSupplier
reading sources... [ 17%] source/rdkit.Chem.FeatFinderCLI
reading sources... [ 17%] source/rdkit.Chem.FeatMaps
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapParser
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapPoint
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapUtils
reading sources... [ 19%] source/rdkit.Chem.FeatMaps.FeatMaps
reading sources... [ 19%] source/rdkit.Chem.Features
reading sources... [ 19%] source/rdkit.Chem.Features.FeatDirUtilsRD
reading sources... [ 20%] source/rdkit.Chem.Features.ShowFeats
reading sources... [ 20%] source/rdkit.Chem.FilterCatalog
reading sources... [ 20%] source/rdkit.Chem.Fingerprints
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.ClusterMols
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.DbFpSupplier
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.FingerprintMols
reading sources... [ 22%] source/rdkit.Chem.Fingerprints.MolSimilarity
reading sources... [ 22%] source/rdkit.Chem.Fingerprints.SimilarityScreener
reading sources... [ 22%] source/rdkit.Chem.Fraggle
reading sources... [ 23%] source/rdkit.Chem.Fraggle.FraggleSim
reading sources... [ 23%] source/rdkit.Chem.FragmentCatalog
reading sources... [ 23%] source/rdkit.Chem.FragmentMatcher
reading sources... [ 24%] source/rdkit.Chem.Fragments
reading sources... [ 24%] source/rdkit.Chem.FunctionalGroups
reading sources... [ 24%] source/rdkit.Chem.GraphDescriptors
reading sources... [ 25%] source/rdkit.Chem.Graphs
reading sources... [ 25%] source/rdkit.Chem.Lipinski
reading sources... [ 25%] source/rdkit.Chem.MACCSkeys
reading sources... [ 25%] source/rdkit.Chem.MCS
reading sources... [ 26%] source/rdkit.Chem.MolCatalog
reading sources... [ 26%] source/rdkit.Chem.MolDb
reading sources... [ 26%] source/rdkit.Chem.MolDb.FingerprintUtils
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_orig
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_sa
reading sources... [ 28%] source/rdkit.Chem.MolDraw.rdMolDraw2D
reading sources... [ 28%] source/rdkit.Chem.MolKey
reading sources... [ 28%] source/rdkit.Chem.MolKey.InchiInfo
reading sources... [ 29%] source/rdkit.Chem.MolKey.MolKey
reading sources... [ 29%] source/rdkit.Chem.MolStandardize
reading sources... [ 29%] source/rdkit.Chem.MolStandardize.rdMolStandardize
reading sources... [ 30%] source/rdkit.Chem.MolSurf
reading sources... [ 30%] source/rdkit.Chem.PandasTools
reading sources... [ 30%] source/rdkit.Chem.PeriodicTable
reading sources... [ 31%] source/rdkit.Chem.Pharm2D
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Generate
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.LazyGenerator
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.Matcher
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.SigFactory
reading sources... [ 33%] source/rdkit.Chem.Pharm2D.Utils
reading sources... [ 33%] source/rdkit.Chem.Pharm3D
reading sources... [ 33%] source/rdkit.Chem.Pharm3D.EmbedLib
reading sources... [ 34%] source/rdkit.Chem.Pharm3D.ExcludedVolume
reading sources... [ 34%] source/rdkit.Chem.Pharm3D.Pharmacophore
reading sources... [ 34%] source/rdkit.Chem.PropertyMol
reading sources... [ 35%] source/rdkit.Chem.PyMol
reading sources... [ 35%] source/rdkit.Chem.QED
reading sources... [ 35%] source/rdkit.Chem.Randomize
reading sources... [ 36%] source/rdkit.Chem.Recap
reading sources... [ 36%] source/rdkit.Chem.ReducedGraphs
reading sources... [ 36%] source/rdkit.Chem.SATIS
reading sources... [ 37%] source/rdkit.Chem.SaltRemover
reading sources... [ 37%] source/rdkit.Chem.Scaffolds
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.MurckoScaffold
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.rdScaffoldNetwork
reading sources... [ 38%] source/rdkit.Chem.ShowMols
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum.Enumerator
reading sources... [ 39%] source/rdkit.Chem.Subshape
reading sources... [ 39%] source/rdkit.Chem.Subshape.BuilderUtils
reading sources... [ 39%] source/rdkit.Chem.Subshape.SubshapeAligner
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeBuilder
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeObjects
reading sources... [ 40%] source/rdkit.Chem.Subshape.testCombined
reading sources... [ 41%] source/rdkit.Chem.Suppliers
reading sources... [ 41%] source/rdkit.Chem.Suppliers.DbMolSupplier
reading sources... [ 41%] source/rdkit.Chem.Suppliers.MolSupplier
reading sources... [ 42%] source/rdkit.Chem.TemplateAlign
reading sources... [ 42%] source/rdkit.Chem.TorsionFingerprints
reading sources... [ 42%] source/rdkit.Chem.fmcs
reading sources... [ 43%] source/rdkit.Chem.fmcs.fmcs
reading sources... [ 43%] source/rdkit.Chem.inchi
reading sources... [ 43%] source/rdkit.Chem.rdChemReactions
reading sources... [ 44%] source/rdkit.Chem.rdChemicalFeatures
reading sources... [ 44%] source/rdkit.Chem.rdCoordGen
reading sources... [ 44%] source/rdkit.Chem.rdDepictor
reading sources... [ 45%] source/rdkit.Chem.rdDistGeom
reading sources... [ 45%] source/rdkit.Chem.rdFMCS
reading sources... [ 45%] source/rdkit.Chem.rdFingerprintGenerator
reading sources... [ 46%] source/rdkit.Chem.rdForceFieldHelpers
reading sources... [ 46%] source/rdkit.Chem.rdFreeSASA
reading sources... [ 46%] source/rdkit.Chem.rdMHFPFingerprint
reading sources... [ 47%] source/rdkit.Chem.rdMMPA
reading sources... [ 47%] source/rdkit.Chem.rdMolAlign
reading sources... [ 47%] source/rdkit.Chem.rdMolCatalog
reading sources... [ 48%] source/rdkit.Chem.rdMolChemicalFeatures
reading sources... [ 48%] source/rdkit.Chem.rdMolDescriptors
reading sources... [ 48%] source/rdkit.Chem.rdMolHash
reading sources... [ 49%] source/rdkit.Chem.rdMolInterchange
reading sources... [ 49%] source/rdkit.Chem.rdMolTransforms
reading sources... [ 49%] source/rdkit.Chem.rdPartialCharges
reading sources... [ 50%] source/rdkit.Chem.rdRGroupDecomposition
reading sources... [ 50%] source/rdkit.Chem.rdReducedGraphs
reading sources... [ 50%] source/rdkit.Chem.rdSLNParse
reading sources... [ 50%] source/rdkit.Chem.rdShapeHelpers
reading sources... [ 51%] source/rdkit.Chem.rdStructChecker
reading sources... [ 51%] source/rdkit.Chem.rdSubstructLibrary
reading sources... [ 51%] source/rdkit.Chem.rdchem
reading sources... [ 52%] source/rdkit.Chem.rdfiltercatalog
reading sources... [ 52%] source/rdkit.Chem.rdfragcatalog
reading sources... [ 52%] source/rdkit.Chem.rdinchi
reading sources... [ 53%] source/rdkit.Chem.rdmolfiles
reading sources... [ 53%] source/rdkit.Chem.rdmolops
reading sources... [ 53%] source/rdkit.Chem.rdqueries
reading sources... [ 54%] source/rdkit.Chem.rdtrajectory
reading sources... [ 54%] source/rdkit.DataManip
reading sources... [ 54%] source/rdkit.DataManip.Metric
reading sources... [ 55%] source/rdkit.DataManip.Metric.rdMetricMatrixCalc
reading sources... [ 55%] source/rdkit.DataStructs
reading sources... [ 55%] source/rdkit.DataStructs.BitEnsemble
reading sources... [ 56%] source/rdkit.DataStructs.BitEnsembleDb
reading sources... [ 56%] source/rdkit.DataStructs.BitUtils
reading sources... [ 56%] source/rdkit.DataStructs.HierarchyVis
reading sources... [ 57%] source/rdkit.DataStructs.LazySignature
reading sources... [ 57%] source/rdkit.DataStructs.TopNContainer
reading sources... [ 57%] source/rdkit.DataStructs.VectCollection
reading sources... [ 58%] source/rdkit.DataStructs.cDataStructs
reading sources... [ 58%] source/rdkit.Dbase
reading sources... [ 58%] source/rdkit.Dbase.DbConnection
reading sources... [ 59%] source/rdkit.Dbase.DbInfo
reading sources... [ 59%] source/rdkit.Dbase.DbModule
reading sources... [ 59%] source/rdkit.Dbase.DbReport
reading sources... [ 60%] source/rdkit.Dbase.DbResultSet
reading sources... [ 60%] source/rdkit.Dbase.DbUtils
reading sources... [ 60%] source/rdkit.Dbase.StorageUtils
reading sources... [ 61%] source/rdkit.DistanceGeometry
reading sources... [ 61%] source/rdkit.DistanceGeometry.DistGeom
reading sources... [ 61%] source/rdkit.ForceField
reading sources... [ 62%] source/rdkit.ForceField.rdForceField
reading sources... [ 62%] source/rdkit.Geometry
reading sources... [ 62%] source/rdkit.Geometry.rdGeometry
reading sources... [ 62%] source/rdkit.ML
reading sources... [ 63%] source/rdkit.ML.AnalyzeComposite
reading sources... [ 63%] source/rdkit.ML.BuildComposite
reading sources... [ 63%] source/rdkit.ML.Cluster
reading sources... [ 64%] source/rdkit.ML.Cluster.Butina
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterUtils
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterVis
reading sources... [ 65%] source/rdkit.ML.Cluster.Clustering
reading sources... [ 65%] source/rdkit.ML.Cluster.Clusters
reading sources... [ 65%] source/rdkit.ML.Cluster.Murtagh
reading sources... [ 66%] source/rdkit.ML.Cluster.Resemblance
reading sources... [ 66%] source/rdkit.ML.Cluster.Standardize
reading sources... [ 66%] source/rdkit.ML.Composite
reading sources... [ 67%] source/rdkit.ML.Composite.AdjustComposite
reading sources... [ 67%] source/rdkit.ML.Composite.BayesComposite
reading sources... [ 67%] source/rdkit.ML.Composite.Composite
reading sources... [ 68%] source/rdkit.ML.CompositeRun
reading sources... [ 68%] source/rdkit.ML.Data
reading sources... [ 68%] source/rdkit.ML.Data.DataUtils
reading sources... [ 69%] source/rdkit.ML.Data.FindQuantBounds
reading sources... [ 69%] source/rdkit.ML.Data.MLData
reading sources... [ 69%] source/rdkit.ML.Data.Quantize
reading sources... [ 70%] source/rdkit.ML.Data.SplitData
reading sources... [ 70%] source/rdkit.ML.Data.Stats
reading sources... [ 70%] source/rdkit.ML.Data.Transforms
reading sources... [ 71%] source/rdkit.ML.DecTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildQuantTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildSigTree
reading sources... [ 72%] source/rdkit.ML.DecTree.CrossValidate
reading sources... [ 72%] source/rdkit.ML.DecTree.DecTree
reading sources... [ 72%] source/rdkit.ML.DecTree.Forest
reading sources... [ 73%] source/rdkit.ML.DecTree.ID3
reading sources... [ 73%] source/rdkit.ML.DecTree.PruneTree
reading sources... [ 73%] source/rdkit.ML.DecTree.QuantTree
reading sources... [ 74%] source/rdkit.ML.DecTree.SigTree
reading sources... [ 74%] source/rdkit.ML.DecTree.Tree
reading sources... [ 74%] source/rdkit.ML.DecTree.TreeUtils
reading sources... [ 75%] source/rdkit.ML.DecTree.TreeVis
reading sources... [ 75%] source/rdkit.ML.DecTree.randomtest
reading sources... [ 75%] source/rdkit.ML.Descriptors
reading sources... [ 75%] source/rdkit.ML.Descriptors.CompoundDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Descriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.MoleculeDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Parser
reading sources... [ 77%] source/rdkit.ML.EnrichPlot
reading sources... [ 77%] source/rdkit.ML.GrowComposite
reading sources... [ 77%] source/rdkit.ML.InfoTheory
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitClusterer
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitRank
reading sources... [ 78%] source/rdkit.ML.InfoTheory.entropy
reading sources... [ 79%] source/rdkit.ML.InfoTheory.rdInfoTheory
reading sources... [ 79%] source/rdkit.ML.KNN
reading sources... [ 79%] source/rdkit.ML.KNN.CrossValidate
reading sources... [ 80%] source/rdkit.ML.KNN.DistFunctions
reading sources... [ 80%] source/rdkit.ML.KNN.KNNClassificationModel
reading sources... [ 80%] source/rdkit.ML.KNN.KNNModel
reading sources... [ 81%] source/rdkit.ML.KNN.KNNRegressionModel
reading sources... [ 81%] source/rdkit.ML.MLUtils
reading sources... [ 81%] source/rdkit.ML.MLUtils.VoteImg
reading sources... [ 82%] source/rdkit.ML.MatOps
reading sources... [ 82%] source/rdkit.ML.ModelPackage
reading sources... [ 82%] source/rdkit.ML.ModelPackage.PackageUtils
reading sources... [ 83%] source/rdkit.ML.ModelPackage.Packager
reading sources... [ 83%] source/rdkit.ML.NaiveBayes
reading sources... [ 83%] source/rdkit.ML.NaiveBayes.ClassificationModel
reading sources... [ 84%] source/rdkit.ML.NaiveBayes.CrossValidate
reading sources... [ 84%] source/rdkit.ML.Neural
reading sources... [ 84%] source/rdkit.ML.Neural.ActFuncs
reading sources... [ 85%] source/rdkit.ML.Neural.CrossValidate
reading sources... [ 85%] source/rdkit.ML.Neural.NetNode
reading sources... [ 85%] source/rdkit.ML.Neural.Network
reading sources... [ 86%] source/rdkit.ML.Neural.Trainers
reading sources... [ 86%] source/rdkit.ML.SLT
reading sources... [ 86%] source/rdkit.ML.SLT.Risk
reading sources... [ 87%] source/rdkit.ML.Scoring
reading sources... [ 87%] source/rdkit.ML.Scoring.Scoring
reading sources... [ 87%] source/rdkit.ML.ScreenComposite
reading sources... [ 87%] source/rdkit.ML.files
reading sources... [ 88%] source/rdkit.Numerics
reading sources... [ 88%] source/rdkit.Numerics.rdAlignment
reading sources... [ 88%] source/rdkit.RDConfig
reading sources... [ 89%] source/rdkit.RDLogger
reading sources... [ 89%] source/rdkit.RDPaths
reading sources... [ 89%] source/rdkit.RDRandom
reading sources... [ 90%] source/rdkit.SimDivFilters
reading sources... [ 90%] source/rdkit.SimDivFilters.SimilarityPickers
reading sources... [ 90%] source/rdkit.SimDivFilters.rdSimDivPickers
reading sources... [ 91%] source/rdkit.TestRunner
reading sources... [ 91%] source/rdkit.VLib
reading sources... [ 91%] source/rdkit.VLib.Filter
reading sources... [ 92%] source/rdkit.VLib.Node
reading sources... [ 92%] source/rdkit.VLib.NodeLib
reading sources... [ 92%] source/rdkit.VLib.NodeLib.DbMolSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.DbPickleSupplier
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SDSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SmartsMolFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmartsRemover
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesDupeFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesOutput
reading sources... [ 95%] source/rdkit.VLib.NodeLib.SmilesSupply
reading sources... [ 95%] source/rdkit.VLib.NodeLib.demo
reading sources... [ 95%] source/rdkit.VLib.Output
reading sources... [ 96%] source/rdkit.VLib.Supply
reading sources... [ 96%] source/rdkit.VLib.Transform
reading sources... [ 96%] source/rdkit.rdBase
reading sources... [ 97%] source/rdkit.six
reading sources... [ 97%] source/rdkit.utils
reading sources... [ 97%] source/rdkit.utils.cactvs
reading sources... [ 98%] source/rdkit.utils.chemdraw
reading sources... [ 98%] source/rdkit.utils.chemdraw_qax
reading sources... [ 98%] source/rdkit.utils.chemutils
reading sources... [ 99%] source/rdkit.utils.comhack
reading sources... [ 99%] source/rdkit.utils.fileutils
reading sources... [ 99%] source/rdkit.utils.listutils
reading sources... [100%] source/rdkit.utils.spiral

/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:28: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:120: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:120: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:122: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:126: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:127: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:127: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:129: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:133: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:134: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:134: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:136: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:140: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:141: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:141: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:143: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:147: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:148: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:148: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:150: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:154: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:155: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:155: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:157: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:161: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:162: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:162: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:164: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:184: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:188: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:210: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:233: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:241: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:242: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:253: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:270: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:273: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:276: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:277: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:292: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:293: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:304: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:313: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:314: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:325: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:358: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:358: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:360: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:368: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:374: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:377: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:378: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:383: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:388: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:389: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:393: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:394: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:397: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:398: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:400: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:403: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:405: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:415: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:415: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:417: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:424: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:425: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:425: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:427: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:434: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:435: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:435: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:437: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:444: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:445: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:445: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:447: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:457: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:457: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:459: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:463: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:464: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:464: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:466: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:474: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:474: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:476: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:487: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:487: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:489: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:496: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:497: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:497: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:499: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:512: WARNING: Unexpected section title or transition.

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:513: WARNING: Unexpected section title or transition.

----------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:515: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:109: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:91: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:111: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:113: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:116: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:117: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:117: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:147: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:147: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:147: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:153: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:157: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:157: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:188: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:186: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:186: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:189: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:191: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:199: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:197: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:197: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:200: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:202: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:221: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:213: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:213: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:223: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:238: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:235: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:235: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:240: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:242: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:243: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:256: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:256: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:256: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:263: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:261: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:264: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:266: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:267: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:287: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:275: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:275: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:289: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:290: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:291: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:300: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:297: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:301: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:301: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:301: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:336: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:336: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:336: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:340: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:343: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:343: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:343: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:372: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:372: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:384: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:387: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:388: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:394: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:394: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:394: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:408: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:400: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:412: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:414: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:415: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:419: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:419: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:419: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:437: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:437: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:452: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:454: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:455: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:459: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:459: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:459: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:478: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:464: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:483: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:485: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:489: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:489: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:489: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:537: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:537: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:534: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:539: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:539: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:539: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:546: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:546: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:558: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:560: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:561: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:562: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:566: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:566: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:567: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:584: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:574: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:574: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:584: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:584: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:585: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:585: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:585: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:602: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:599: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:599: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:615: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:615: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:617: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:622: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:619: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:619: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:623: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:626: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:626: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:628: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:631: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:631: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:644: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:638: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:638: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:638: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:646: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:648: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:653: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:651: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:651: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:655: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:653: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:655: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:655: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:659: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:660: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:660: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:672: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:672: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:681: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:682: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:684: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:684: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:686: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:690: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:706: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:707: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:718: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:709: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:709: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:709: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:719: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:741: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:743: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:745: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:798: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:798: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:798: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:875: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:856: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:856: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:876: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:878: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:878: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:916: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:914: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:914: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:919: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:922: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:922: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:924: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:984: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:984: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1019: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1019: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1019: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1035: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1031: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1052: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1052: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1052: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1056: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1056: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1093: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1093: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1124: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1124: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1124: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1128: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1136: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1138: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1139: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1141: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1143: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1192: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1204: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1204: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1197: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1193: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1198: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1206: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1206: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1206: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1248: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1259: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1259: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1249: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1261: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1261: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1261: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1276: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1277: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1279: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1280: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1280: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1300: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1303: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1305: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1307: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1308: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1310: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1325: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1326: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1328: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1329: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1329: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1341: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1342: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1347: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1348: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1350: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1359: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1360: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1365: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1366: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1372: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1373: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1375: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1393: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1394: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1399: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1400: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1405: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1406: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1408: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1419: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1420: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1425: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1426: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1431: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1432: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1434: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1450: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1451: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1453: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1457: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1455: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1455: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1455: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1458: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1460: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1490: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1470: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1470: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1470: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1492: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1493: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1494: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1497: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1498: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1500: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1515: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1518: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1519: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1521: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1522: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:2985: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:20: WARNING: Inconsistent literal block quoting.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:20: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:20: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:80: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:77: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:84: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:84: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:84: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:120: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:115: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:126: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:126: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:126: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:207: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:248: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:371: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:376: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:376: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:376: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:450: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:486: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:487: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:488: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:489: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:494: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Overview.md:20: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Overview.md:32: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Overview.md:55: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:368: WARNING: Malformed table.
Text in column margin in table line 15.

=========  =========================================  ===============  ======  =========
Primitive                  Property                   "Default value"  Range?    Notes
=========  =========================================  ===============  ======  =========
a          "aromatic atom"
A          "aliphatic atom"
D          "explicit degree"                          1                Y
h          "number of implicit hs"                    >0               Y
H          "total number of Hs"                       1
r          "size of smallest SSSR ring"               >0               Y
R          "number of SSSR rings"                     >0               Y
v          "total valence"                            1                Y
x          "number of ring bonds"                     >0               Y
X          "total degree"                             1                Y
z          "number of heteroatom neighbors"           >0               Y       extension
Z          "number of aliphatic heteroatom neighbors" >0               Y       extension
\*         "any atom"
\+         "positive charge"                          1                Y
++         "+2 charge"
\-         "negative charge"                          1                Y
\--        "-2 charge"
^0         "S hybridized"                             n/a              N       extension
^1         "SP hybridized"                            n/a              N       extension
^2         "SP2 hybridized"                           n/a              N       extension
^3         "SP3 hybridized"                           n/a              N       extension
^4         "SP3D hybridized"                          n/a              N       extension
^5         "SP3D2 hybridized"                         n/a              N       extension
=========  =========================================  ===============  ======  =========
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:1394: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/index.rst:9: WARNING: toctree contains reference to nonexisting document 'Cookbook'
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.DSViewer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDraw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.LazyGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.rdScaffoldNetwork' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.testCombined' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMHFPFingerprint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdStructChecker' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.HierarchyVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.randomtest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDLogger' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDRandom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'TestRunner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Filter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Node' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.demo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Output' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Supply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Transform' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdBase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'six' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.cactvs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw_qax' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.comhack' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.fileutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.listutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.spiral' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /<<PKGBUILDDIR>>/Docs/Book/data/README.md: WARNING: document isn't included in any toctree
/<<PKGBUILDDIR>>/Docs/Book/source/modules.rst: WARNING: document isn't included in any toctree
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDraw.rdMolDraw2D.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [  0%] BackwardsIncompatibleChanges
writing output... [  0%] Cartridge
writing output... [  0%] GettingStartedInC++
writing output... [  1%] GettingStartedInPython
writing output... [  1%] Install
writing output... [  1%] Overview
writing output... [  2%] RDKit_Book
writing output... [  2%] api-docs
writing output... [  2%] data/README
writing output... [  3%] index
writing output... [  3%] source/modules
writing output... [  3%] source/rdkit
writing output... [  4%] source/rdkit.Avalon
writing output... [  4%] source/rdkit.Avalon.pyAvalonTools
writing output... [  4%] source/rdkit.Chem
writing output... [  5%] source/rdkit.Chem.AllChem
writing output... [  5%] source/rdkit.Chem.AtomPairs
writing output... [  5%] source/rdkit.Chem.AtomPairs.Pairs
writing output... [  6%] source/rdkit.Chem.AtomPairs.Sheridan
writing output... [  6%] source/rdkit.Chem.AtomPairs.Torsions
writing output... [  6%] source/rdkit.Chem.AtomPairs.Utils
writing output... [  7%] source/rdkit.Chem.BRICS
writing output... [  7%] source/rdkit.Chem.BuildFragmentCatalog
writing output... [  7%] source/rdkit.Chem.ChemUtils
writing output... [  8%] source/rdkit.Chem.ChemUtils.AlignDepict
writing output... [  8%] source/rdkit.Chem.ChemUtils.BulkTester
writing output... [  8%] source/rdkit.Chem.ChemUtils.DescriptorUtilities
writing output... [  9%] source/rdkit.Chem.ChemUtils.SDFToCSV
writing output... [  9%] source/rdkit.Chem.ChemUtils.TemplateExpand
writing output... [  9%] source/rdkit.Chem.ChemicalFeatures
writing output... [ 10%] source/rdkit.Chem.ChemicalForceFields
writing output... [ 10%] source/rdkit.Chem.Crippen
writing output... [ 10%] source/rdkit.Chem.DSViewer
writing output... [ 11%] source/rdkit.Chem.Descriptors
writing output... [ 11%] source/rdkit.Chem.Descriptors3D
writing output... [ 11%] source/rdkit.Chem.Draw
writing output... [ 12%] source/rdkit.Chem.Draw.IPythonConsole
writing output... [ 12%] source/rdkit.Chem.Draw.MolDrawing
writing output... [ 12%] source/rdkit.Chem.Draw.SimilarityMaps
writing output... [ 12%] source/rdkit.Chem.Draw.aggCanvas
writing output... [ 13%] source/rdkit.Chem.Draw.cairoCanvas
writing output... [ 13%] source/rdkit.Chem.Draw.canvasbase
writing output... [ 13%] source/rdkit.Chem.Draw.mplCanvas
writing output... [ 14%] source/rdkit.Chem.Draw.qtCanvas
writing output... [ 14%] source/rdkit.Chem.Draw.rdMolDraw2D
writing output... [ 14%] source/rdkit.Chem.EState
writing output... [ 15%] source/rdkit.Chem.EState.AtomTypes
writing output... [ 15%] source/rdkit.Chem.EState.EState
writing output... [ 15%] source/rdkit.Chem.EState.EState_VSA
writing output... [ 16%] source/rdkit.Chem.EState.Fingerprinter
writing output... [ 16%] source/rdkit.Chem.EnumerateHeterocycles
writing output... [ 16%] source/rdkit.Chem.EnumerateStereoisomers
writing output... [ 17%] source/rdkit.Chem.FastSDMolSupplier
writing output... [ 17%] source/rdkit.Chem.FeatFinderCLI
writing output... [ 17%] source/rdkit.Chem.FeatMaps
writing output... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapParser
writing output... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapPoint
writing output... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapUtils
writing output... [ 19%] source/rdkit.Chem.FeatMaps.FeatMaps
writing output... [ 19%] source/rdkit.Chem.Features
writing output... [ 19%] source/rdkit.Chem.Features.FeatDirUtilsRD
writing output... [ 20%] source/rdkit.Chem.Features.ShowFeats
writing output... [ 20%] source/rdkit.Chem.FilterCatalog
writing output... [ 20%] source/rdkit.Chem.Fingerprints
writing output... [ 21%] source/rdkit.Chem.Fingerprints.ClusterMols
writing output... [ 21%] source/rdkit.Chem.Fingerprints.DbFpSupplier
writing output... [ 21%] source/rdkit.Chem.Fingerprints.FingerprintMols
writing output... [ 22%] source/rdkit.Chem.Fingerprints.MolSimilarity
writing output... [ 22%] source/rdkit.Chem.Fingerprints.SimilarityScreener
writing output... [ 22%] source/rdkit.Chem.Fraggle
writing output... [ 23%] source/rdkit.Chem.Fraggle.FraggleSim
writing output... [ 23%] source/rdkit.Chem.FragmentCatalog
writing output... [ 23%] source/rdkit.Chem.FragmentMatcher
writing output... [ 24%] source/rdkit.Chem.Fragments
writing output... [ 24%] source/rdkit.Chem.FunctionalGroups
writing output... [ 24%] source/rdkit.Chem.GraphDescriptors
writing output... [ 25%] source/rdkit.Chem.Graphs
writing output... [ 25%] source/rdkit.Chem.Lipinski
writing output... [ 25%] source/rdkit.Chem.MACCSkeys
writing output... [ 25%] source/rdkit.Chem.MCS
writing output... [ 26%] source/rdkit.Chem.MolCatalog
writing output... [ 26%] source/rdkit.Chem.MolDb
writing output... [ 26%] source/rdkit.Chem.MolDb.FingerprintUtils
writing output... [ 27%] source/rdkit.Chem.MolDb.Loader
writing output... [ 27%] source/rdkit.Chem.MolDb.Loader_orig
writing output... [ 27%] source/rdkit.Chem.MolDb.Loader_sa
writing output... [ 28%] source/rdkit.Chem.MolDraw.rdMolDraw2D
writing output... [ 28%] source/rdkit.Chem.MolKey
writing output... [ 28%] source/rdkit.Chem.MolKey.InchiInfo
writing output... [ 29%] source/rdkit.Chem.MolKey.MolKey
writing output... [ 29%] source/rdkit.Chem.MolStandardize
writing output... [ 29%] source/rdkit.Chem.MolStandardize.rdMolStandardize
writing output... [ 30%] source/rdkit.Chem.MolSurf
writing output... [ 30%] source/rdkit.Chem.PandasTools
writing output... [ 30%] source/rdkit.Chem.PeriodicTable
writing output... [ 31%] source/rdkit.Chem.Pharm2D
writing output... [ 31%] source/rdkit.Chem.Pharm2D.Generate
writing output... [ 31%] source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D
writing output... [ 32%] source/rdkit.Chem.Pharm2D.LazyGenerator
writing output... [ 32%] source/rdkit.Chem.Pharm2D.Matcher
writing output... [ 32%] source/rdkit.Chem.Pharm2D.SigFactory
writing output... [ 33%] source/rdkit.Chem.Pharm2D.Utils
writing output... [ 33%] source/rdkit.Chem.Pharm3D
writing output... [ 33%] source/rdkit.Chem.Pharm3D.EmbedLib
writing output... [ 34%] source/rdkit.Chem.Pharm3D.ExcludedVolume
writing output... [ 34%] source/rdkit.Chem.Pharm3D.Pharmacophore
writing output... [ 34%] source/rdkit.Chem.PropertyMol
writing output... [ 35%] source/rdkit.Chem.PyMol
writing output... [ 35%] source/rdkit.Chem.QED
writing output... [ 35%] source/rdkit.Chem.Randomize
writing output... [ 36%] source/rdkit.Chem.Recap
writing output... [ 36%] source/rdkit.Chem.ReducedGraphs
writing output... [ 36%] source/rdkit.Chem.SATIS
writing output... [ 37%] source/rdkit.Chem.SaltRemover
writing output... [ 37%] source/rdkit.Chem.Scaffolds
writing output... [ 37%] source/rdkit.Chem.Scaffolds.MurckoScaffold
writing output... [ 37%] source/rdkit.Chem.Scaffolds.rdScaffoldNetwork
writing output... [ 38%] source/rdkit.Chem.ShowMols
writing output... [ 38%] source/rdkit.Chem.SimpleEnum
writing output... [ 38%] source/rdkit.Chem.SimpleEnum.Enumerator
writing output... [ 39%] source/rdkit.Chem.Subshape
writing output... [ 39%] source/rdkit.Chem.Subshape.BuilderUtils
writing output... [ 39%] source/rdkit.Chem.Subshape.SubshapeAligner
writing output... [ 40%] source/rdkit.Chem.Subshape.SubshapeBuilder
writing output... [ 40%] source/rdkit.Chem.Subshape.SubshapeObjects
writing output... [ 40%] source/rdkit.Chem.Subshape.testCombined
writing output... [ 41%] source/rdkit.Chem.Suppliers
writing output... [ 41%] source/rdkit.Chem.Suppliers.DbMolSupplier
writing output... [ 41%] source/rdkit.Chem.Suppliers.MolSupplier
writing output... [ 42%] source/rdkit.Chem.TemplateAlign
writing output... [ 42%] source/rdkit.Chem.TorsionFingerprints
writing output... [ 42%] source/rdkit.Chem.fmcs
writing output... [ 43%] source/rdkit.Chem.fmcs.fmcs
writing output... [ 43%] source/rdkit.Chem.inchi
writing output... [ 43%] source/rdkit.Chem.rdChemReactions
writing output... [ 44%] source/rdkit.Chem.rdChemicalFeatures
writing output... [ 44%] source/rdkit.Chem.rdCoordGen
writing output... [ 44%] source/rdkit.Chem.rdDepictor
writing output... [ 45%] source/rdkit.Chem.rdDistGeom
writing output... [ 45%] source/rdkit.Chem.rdFMCS
writing output... [ 45%] source/rdkit.Chem.rdFingerprintGenerator
writing output... [ 46%] source/rdkit.Chem.rdForceFieldHelpers
writing output... [ 46%] source/rdkit.Chem.rdFreeSASA
writing output... [ 46%] source/rdkit.Chem.rdMHFPFingerprint
writing output... [ 47%] source/rdkit.Chem.rdMMPA
writing output... [ 47%] source/rdkit.Chem.rdMolAlign
writing output... [ 47%] source/rdkit.Chem.rdMolCatalog
writing output... [ 48%] source/rdkit.Chem.rdMolChemicalFeatures
writing output... [ 48%] source/rdkit.Chem.rdMolDescriptors
writing output... [ 48%] source/rdkit.Chem.rdMolHash
writing output... [ 49%] source/rdkit.Chem.rdMolInterchange
writing output... [ 49%] source/rdkit.Chem.rdMolTransforms
writing output... [ 49%] source/rdkit.Chem.rdPartialCharges
writing output... [ 50%] source/rdkit.Chem.rdRGroupDecomposition
writing output... [ 50%] source/rdkit.Chem.rdReducedGraphs
writing output... [ 50%] source/rdkit.Chem.rdSLNParse
writing output... [ 50%] source/rdkit.Chem.rdShapeHelpers
writing output... [ 51%] source/rdkit.Chem.rdStructChecker
writing output... [ 51%] source/rdkit.Chem.rdSubstructLibrary
writing output... [ 51%] source/rdkit.Chem.rdchem
writing output... [ 52%] source/rdkit.Chem.rdfiltercatalog
writing output... [ 52%] source/rdkit.Chem.rdfragcatalog
writing output... [ 52%] source/rdkit.Chem.rdinchi
writing output... [ 53%] source/rdkit.Chem.rdmolfiles
writing output... [ 53%] source/rdkit.Chem.rdmolops
writing output... [ 53%] source/rdkit.Chem.rdqueries
writing output... [ 54%] source/rdkit.Chem.rdtrajectory
writing output... [ 54%] source/rdkit.DataManip
writing output... [ 54%] source/rdkit.DataManip.Metric
writing output... [ 55%] source/rdkit.DataManip.Metric.rdMetricMatrixCalc
writing output... [ 55%] source/rdkit.DataStructs
writing output... [ 55%] source/rdkit.DataStructs.BitEnsemble
writing output... [ 56%] source/rdkit.DataStructs.BitEnsembleDb
writing output... [ 56%] source/rdkit.DataStructs.BitUtils
writing output... [ 56%] source/rdkit.DataStructs.HierarchyVis
writing output... [ 57%] source/rdkit.DataStructs.LazySignature
writing output... [ 57%] source/rdkit.DataStructs.TopNContainer
writing output... [ 57%] source/rdkit.DataStructs.VectCollection
writing output... [ 58%] source/rdkit.DataStructs.cDataStructs
writing output... [ 58%] source/rdkit.Dbase
writing output... [ 58%] source/rdkit.Dbase.DbConnection
writing output... [ 59%] source/rdkit.Dbase.DbInfo
writing output... [ 59%] source/rdkit.Dbase.DbModule
writing output... [ 59%] source/rdkit.Dbase.DbReport
writing output... [ 60%] source/rdkit.Dbase.DbResultSet
writing output... [ 60%] source/rdkit.Dbase.DbUtils
writing output... [ 60%] source/rdkit.Dbase.StorageUtils
writing output... [ 61%] source/rdkit.DistanceGeometry
writing output... [ 61%] source/rdkit.DistanceGeometry.DistGeom
writing output... [ 61%] source/rdkit.ForceField
writing output... [ 62%] source/rdkit.ForceField.rdForceField
writing output... [ 62%] source/rdkit.Geometry
writing output... [ 62%] source/rdkit.Geometry.rdGeometry
writing output... [ 62%] source/rdkit.ML
writing output... [ 63%] source/rdkit.ML.AnalyzeComposite
writing output... [ 63%] source/rdkit.ML.BuildComposite
writing output... [ 63%] source/rdkit.ML.Cluster
writing output... [ 64%] source/rdkit.ML.Cluster.Butina
writing output... [ 64%] source/rdkit.ML.Cluster.ClusterUtils
writing output... [ 64%] source/rdkit.ML.Cluster.ClusterVis
writing output... [ 65%] source/rdkit.ML.Cluster.Clustering
writing output... [ 65%] source/rdkit.ML.Cluster.Clusters
writing output... [ 65%] source/rdkit.ML.Cluster.Murtagh
writing output... [ 66%] source/rdkit.ML.Cluster.Resemblance
writing output... [ 66%] source/rdkit.ML.Cluster.Standardize
writing output... [ 66%] source/rdkit.ML.Composite
writing output... [ 67%] source/rdkit.ML.Composite.AdjustComposite
writing output... [ 67%] source/rdkit.ML.Composite.BayesComposite
writing output... [ 67%] source/rdkit.ML.Composite.Composite
writing output... [ 68%] source/rdkit.ML.CompositeRun
writing output... [ 68%] source/rdkit.ML.Data
writing output... [ 68%] source/rdkit.ML.Data.DataUtils
writing output... [ 69%] source/rdkit.ML.Data.FindQuantBounds
writing output... [ 69%] source/rdkit.ML.Data.MLData
writing output... [ 69%] source/rdkit.ML.Data.Quantize
writing output... [ 70%] source/rdkit.ML.Data.SplitData
writing output... [ 70%] source/rdkit.ML.Data.Stats
writing output... [ 70%] source/rdkit.ML.Data.Transforms
writing output... [ 71%] source/rdkit.ML.DecTree
writing output... [ 71%] source/rdkit.ML.DecTree.BuildQuantTree
writing output... [ 71%] source/rdkit.ML.DecTree.BuildSigTree
writing output... [ 72%] source/rdkit.ML.DecTree.CrossValidate
writing output... [ 72%] source/rdkit.ML.DecTree.DecTree
writing output... [ 72%] source/rdkit.ML.DecTree.Forest
writing output... [ 73%] source/rdkit.ML.DecTree.ID3
writing output... [ 73%] source/rdkit.ML.DecTree.PruneTree
writing output... [ 73%] source/rdkit.ML.DecTree.QuantTree
writing output... [ 74%] source/rdkit.ML.DecTree.SigTree
writing output... [ 74%] source/rdkit.ML.DecTree.Tree
writing output... [ 74%] source/rdkit.ML.DecTree.TreeUtils
writing output... [ 75%] source/rdkit.ML.DecTree.TreeVis
writing output... [ 75%] source/rdkit.ML.DecTree.randomtest
writing output... [ 75%] source/rdkit.ML.Descriptors
writing output... [ 75%] source/rdkit.ML.Descriptors.CompoundDescriptors
writing output... [ 76%] source/rdkit.ML.Descriptors.Descriptors
writing output... [ 76%] source/rdkit.ML.Descriptors.MoleculeDescriptors
writing output... [ 76%] source/rdkit.ML.Descriptors.Parser
writing output... [ 77%] source/rdkit.ML.EnrichPlot
writing output... [ 77%] source/rdkit.ML.GrowComposite
writing output... [ 77%] source/rdkit.ML.InfoTheory
writing output... [ 78%] source/rdkit.ML.InfoTheory.BitClusterer
writing output... [ 78%] source/rdkit.ML.InfoTheory.BitRank
writing output... [ 78%] source/rdkit.ML.InfoTheory.entropy
writing output... [ 79%] source/rdkit.ML.InfoTheory.rdInfoTheory
writing output... [ 79%] source/rdkit.ML.KNN
writing output... [ 79%] source/rdkit.ML.KNN.CrossValidate
writing output... [ 80%] source/rdkit.ML.KNN.DistFunctions
writing output... [ 80%] source/rdkit.ML.KNN.KNNClassificationModel
writing output... [ 80%] source/rdkit.ML.KNN.KNNModel
writing output... [ 81%] source/rdkit.ML.KNN.KNNRegressionModel
writing output... [ 81%] source/rdkit.ML.MLUtils
writing output... [ 81%] source/rdkit.ML.MLUtils.VoteImg
writing output... [ 82%] source/rdkit.ML.MatOps
writing output... [ 82%] source/rdkit.ML.ModelPackage
writing output... [ 82%] source/rdkit.ML.ModelPackage.PackageUtils
writing output... [ 83%] source/rdkit.ML.ModelPackage.Packager
writing output... [ 83%] source/rdkit.ML.NaiveBayes
writing output... [ 83%] source/rdkit.ML.NaiveBayes.ClassificationModel
writing output... [ 84%] source/rdkit.ML.NaiveBayes.CrossValidate
writing output... [ 84%] source/rdkit.ML.Neural
writing output... [ 84%] source/rdkit.ML.Neural.ActFuncs
writing output... [ 85%] source/rdkit.ML.Neural.CrossValidate
writing output... [ 85%] source/rdkit.ML.Neural.NetNode
writing output... [ 85%] source/rdkit.ML.Neural.Network
writing output... [ 86%] source/rdkit.ML.Neural.Trainers
writing output... [ 86%] source/rdkit.ML.SLT
writing output... [ 86%] source/rdkit.ML.SLT.Risk
writing output... [ 87%] source/rdkit.ML.Scoring
writing output... [ 87%] source/rdkit.ML.Scoring.Scoring
writing output... [ 87%] source/rdkit.ML.ScreenComposite
writing output... [ 87%] source/rdkit.ML.files
writing output... [ 88%] source/rdkit.Numerics
writing output... [ 88%] source/rdkit.Numerics.rdAlignment
writing output... [ 88%] source/rdkit.RDConfig
writing output... [ 89%] source/rdkit.RDLogger
writing output... [ 89%] source/rdkit.RDPaths
writing output... [ 89%] source/rdkit.RDRandom
writing output... [ 90%] source/rdkit.SimDivFilters
writing output... [ 90%] source/rdkit.SimDivFilters.SimilarityPickers
writing output... [ 90%] source/rdkit.SimDivFilters.rdSimDivPickers
writing output... [ 91%] source/rdkit.TestRunner
writing output... [ 91%] source/rdkit.VLib
writing output... [ 91%] source/rdkit.VLib.Filter
writing output... [ 92%] source/rdkit.VLib.Node
writing output... [ 92%] source/rdkit.VLib.NodeLib
writing output... [ 92%] source/rdkit.VLib.NodeLib.DbMolSupply
writing output... [ 93%] source/rdkit.VLib.NodeLib.DbPickleSupplier
writing output... [ 93%] source/rdkit.VLib.NodeLib.SDSupply
writing output... [ 93%] source/rdkit.VLib.NodeLib.SmartsMolFilter
writing output... [ 94%] source/rdkit.VLib.NodeLib.SmartsRemover
writing output... [ 94%] source/rdkit.VLib.NodeLib.SmilesDupeFilter
writing output... [ 94%] source/rdkit.VLib.NodeLib.SmilesOutput
writing output... [ 95%] source/rdkit.VLib.NodeLib.SmilesSupply
writing output... [ 95%] source/rdkit.VLib.NodeLib.demo
writing output... [ 95%] source/rdkit.VLib.Output
writing output... [ 96%] source/rdkit.VLib.Supply
writing output... [ 96%] source/rdkit.VLib.Transform
writing output... [ 96%] source/rdkit.rdBase
writing output... [ 97%] source/rdkit.six
writing output... [ 97%] source/rdkit.utils
writing output... [ 97%] source/rdkit.utils.cactvs
writing output... [ 98%] source/rdkit.utils.chemdraw
writing output... [ 98%] source/rdkit.utils.chemdraw_qax
writing output... [ 98%] source/rdkit.utils.chemutils
writing output... [ 99%] source/rdkit.utils.comhack
writing output... [ 99%] source/rdkit.utils.fileutils
writing output... [ 99%] source/rdkit.utils.listutils
writing output... [100%] source/rdkit.utils.spiral

/<<PKGBUILDDIR>>/Docs/Book/index.rst:9: WARNING: toctree contains reference to document 'Overview' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/Docs/Book/index.rst:9: WARNING: toctree contains reference to document 'Install' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/Docs/Book/index.rst:9: WARNING: toctree contains reference to document 'Cartridge' that doesn't have a title: no link will be generated
/<<PKGBUILDDIR>>/Docs/Book/index.rst:9: WARNING: toctree contains reference to document 'BackwardsIncompatibleChanges' that doesn't have a title: no link will be generated
generating indices... genindex done
writing additional pages... search done
copying images... [  2%] images/picture_1.png
copying images... [  4%] images/picture_0.png
copying images... [  6%] images/picture_3.png
copying images... [  8%] images/picture_2.png
copying images... [ 10%] images/picture_4.png
copying images... [ 12%] images/cdk2_mol1.png
copying images... [ 14%] images/cdk2_mol2.png
copying images... [ 16%] images/cdk2_molgrid.png
copying images... [ 18%] images/cdk2_molgrid_aligned.png
copying images... [ 20%] images/atom_highlights_1.png
copying images... [ 22%] images/atom_highlights_2.png
copying images... [ 24%] images/atom_highlights_3.png
copying images... [ 26%] images/atom_annotation_1.png
copying images... [ 28%] images/substruct_search_parameters1.png
copying images... [ 30%] images/mfp2_bit872.svg
copying images... [ 32%] images/rdk_bit1553.svg
copying images... [ 34%] images/rdk_bit1553_2.svg
copying images... [ 36%] images/similarity_map_fp1.png
copying images... [ 38%] images/similarity_map_fp2.png
copying images... [ 40%] images/similarity_map_fp3.png
copying images... [ 42%] images/similarity_map_charges.png
copying images... [ 44%] images/similarity_map_crippen.png
copying images... [ 46%] images/picture_6.png
copying images... [ 48%] images/picture_5.png
copying images... [ 50%] images/picture_9.png
copying images... [ 52%] images/picture_8.png
copying images... [ 54%] images/picture_7.png
copying images... [ 56%] images/picture_10.png
copying images... [ 58%] images/picture_12.png
copying images... [ 60%] images/picture_11.png
copying images... [ 62%] images/picture_10.jpg
copying images... [ 64%] ../Code/images/enhanced_stereo_and1_and2_base.png
copying images... [ 66%] ../Code/images/enhanced_stereo_and1_and2_expand.png
copying images... [ 68%] ../Code/images/enhanced_stereo_and1_cis_base.png
copying images... [ 70%] ../Code/images/enhanced_stereo_and1_cis_expand.png
copying images... [ 72%] ../Code/images/enhanced_stereo_and1_trans_base.png
copying images... [ 74%] ../Code/images/enhanced_stereo_and1_trans_expand.png
copying images... [ 76%] ../Code/images/enhanced_stereo_or1_or2_base.png
copying images... [ 78%] ../Code/images/enhanced_stereo_or1_cis_base.png
copying images... [ 80%] ../Code/images/enhanced_stereo_or1_trans_base.png
copying images... [ 82%] ../Code/images/enhanced_stereo_abs_and_base.png
copying images... [ 84%] ../Code/images/enhanced_stereo_abs_and_expand.png
copying images... [ 86%] ../Code/images/enhanced_stereo_abs_or_base.png
copying images... [ 88%] ./images/EnhancedStereoSSS_molA.png
copying images... [ 90%] ./images/EnhancedStereoSSS_molB.png
copying images... [ 92%] ./images/EnhancedStereoSSS_molC.png
copying images... [ 94%] ./images/EnhancedStereoSSS_molD.png
copying images... [ 96%] ./images/EnhancedStereoSSS_molE.png
copying images... [ 98%] ./images/EnhancedStereoSSS_molF.png
copying images... [100%] ./images/EnhancedStereoSSS_molG.png

copying static files... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 856 warnings.

The HTML pages are in _build/html.

Build finished. The HTML pages are in _build/html.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book'
(cd /<<PKGBUILDDIR>>/Docs/Book; RDBASE=/<<PKGBUILDDIR>> /usr/bin/make latexpdf)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book'
mkdir -p _build/html/cppapi
cp -r /<<PKGBUILDDIR>>/Code/docs/*  _build/html/cppapi
sphinx-build -b latex -d _build/doctrees   . _build/latex
Running Sphinx v3.3.1
making output directory... done
WARNING: html_static_path entry '_static' does not exist
loading pickled environment... done
building [mo]: targets for 0 po files that are out of date
building [latex]: all documents
updating environment: [config changed ('source_parsers')] 308 added, 0 changed, 0 removed
reading sources... [  0%] BackwardsIncompatibleChanges
reading sources... [  0%] Cartridge
reading sources... [  0%] GettingStartedInC++
reading sources... [  1%] GettingStartedInPython
reading sources... [  1%] Install
reading sources... [  1%] Overview
reading sources... [  2%] RDKit_Book
reading sources... [  2%] api-docs
reading sources... [  2%] data/README
reading sources... [  3%] index
reading sources... [  3%] source/modules
reading sources... [  3%] source/rdkit
reading sources... [  4%] source/rdkit.Avalon
reading sources... [  4%] source/rdkit.Avalon.pyAvalonTools
reading sources... [  4%] source/rdkit.Chem
reading sources... [  5%] source/rdkit.Chem.AllChem
reading sources... [  5%] source/rdkit.Chem.AtomPairs
reading sources... [  5%] source/rdkit.Chem.AtomPairs.Pairs
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Sheridan
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Torsions
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Utils
reading sources... [  7%] source/rdkit.Chem.BRICS
reading sources... [  7%] source/rdkit.Chem.BuildFragmentCatalog
reading sources... [  7%] source/rdkit.Chem.ChemUtils
reading sources... [  8%] source/rdkit.Chem.ChemUtils.AlignDepict
reading sources... [  8%] source/rdkit.Chem.ChemUtils.BulkTester
reading sources... [  8%] source/rdkit.Chem.ChemUtils.DescriptorUtilities
reading sources... [  9%] source/rdkit.Chem.ChemUtils.SDFToCSV
reading sources... [  9%] source/rdkit.Chem.ChemUtils.TemplateExpand
reading sources... [  9%] source/rdkit.Chem.ChemicalFeatures
reading sources... [ 10%] source/rdkit.Chem.ChemicalForceFields
reading sources... [ 10%] source/rdkit.Chem.Crippen
reading sources... [ 10%] source/rdkit.Chem.DSViewer
reading sources... [ 11%] source/rdkit.Chem.Descriptors
reading sources... [ 11%] source/rdkit.Chem.Descriptors3D
reading sources... [ 11%] source/rdkit.Chem.Draw
reading sources... [ 12%] source/rdkit.Chem.Draw.IPythonConsole
reading sources... [ 12%] source/rdkit.Chem.Draw.MolDrawing
reading sources... [ 12%] source/rdkit.Chem.Draw.SimilarityMaps
reading sources... [ 12%] source/rdkit.Chem.Draw.aggCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.cairoCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.canvasbase
reading sources... [ 13%] source/rdkit.Chem.Draw.mplCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.qtCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.rdMolDraw2D
reading sources... [ 14%] source/rdkit.Chem.EState
reading sources... [ 15%] source/rdkit.Chem.EState.AtomTypes
reading sources... [ 15%] source/rdkit.Chem.EState.EState
reading sources... [ 15%] source/rdkit.Chem.EState.EState_VSA
reading sources... [ 16%] source/rdkit.Chem.EState.Fingerprinter
reading sources... [ 16%] source/rdkit.Chem.EnumerateHeterocycles
reading sources... [ 16%] source/rdkit.Chem.EnumerateStereoisomers
reading sources... [ 17%] source/rdkit.Chem.FastSDMolSupplier
reading sources... [ 17%] source/rdkit.Chem.FeatFinderCLI
reading sources... [ 17%] source/rdkit.Chem.FeatMaps
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapParser
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapPoint
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapUtils
reading sources... [ 19%] source/rdkit.Chem.FeatMaps.FeatMaps
reading sources... [ 19%] source/rdkit.Chem.Features
reading sources... [ 19%] source/rdkit.Chem.Features.FeatDirUtilsRD
reading sources... [ 20%] source/rdkit.Chem.Features.ShowFeats
reading sources... [ 20%] source/rdkit.Chem.FilterCatalog
reading sources... [ 20%] source/rdkit.Chem.Fingerprints
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.ClusterMols
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.DbFpSupplier
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.FingerprintMols
reading sources... [ 22%] source/rdkit.Chem.Fingerprints.MolSimilarity
reading sources... [ 22%] source/rdkit.Chem.Fingerprints.SimilarityScreener
reading sources... [ 22%] source/rdkit.Chem.Fraggle
reading sources... [ 23%] source/rdkit.Chem.Fraggle.FraggleSim
reading sources... [ 23%] source/rdkit.Chem.FragmentCatalog
reading sources... [ 23%] source/rdkit.Chem.FragmentMatcher
reading sources... [ 24%] source/rdkit.Chem.Fragments
reading sources... [ 24%] source/rdkit.Chem.FunctionalGroups
reading sources... [ 24%] source/rdkit.Chem.GraphDescriptors
reading sources... [ 25%] source/rdkit.Chem.Graphs
reading sources... [ 25%] source/rdkit.Chem.Lipinski
reading sources... [ 25%] source/rdkit.Chem.MACCSkeys
reading sources... [ 25%] source/rdkit.Chem.MCS
reading sources... [ 26%] source/rdkit.Chem.MolCatalog
reading sources... [ 26%] source/rdkit.Chem.MolDb
reading sources... [ 26%] source/rdkit.Chem.MolDb.FingerprintUtils
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_orig
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_sa
reading sources... [ 28%] source/rdkit.Chem.MolDraw.rdMolDraw2D
reading sources... [ 28%] source/rdkit.Chem.MolKey
reading sources... [ 28%] source/rdkit.Chem.MolKey.InchiInfo
reading sources... [ 29%] source/rdkit.Chem.MolKey.MolKey
reading sources... [ 29%] source/rdkit.Chem.MolStandardize
reading sources... [ 29%] source/rdkit.Chem.MolStandardize.rdMolStandardize
reading sources... [ 30%] source/rdkit.Chem.MolSurf
reading sources... [ 30%] source/rdkit.Chem.PandasTools
reading sources... [ 30%] source/rdkit.Chem.PeriodicTable
reading sources... [ 31%] source/rdkit.Chem.Pharm2D
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Generate
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.LazyGenerator
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.Matcher
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.SigFactory
reading sources... [ 33%] source/rdkit.Chem.Pharm2D.Utils
reading sources... [ 33%] source/rdkit.Chem.Pharm3D
reading sources... [ 33%] source/rdkit.Chem.Pharm3D.EmbedLib
reading sources... [ 34%] source/rdkit.Chem.Pharm3D.ExcludedVolume
reading sources... [ 34%] source/rdkit.Chem.Pharm3D.Pharmacophore
reading sources... [ 34%] source/rdkit.Chem.PropertyMol
reading sources... [ 35%] source/rdkit.Chem.PyMol
reading sources... [ 35%] source/rdkit.Chem.QED
reading sources... [ 35%] source/rdkit.Chem.Randomize
reading sources... [ 36%] source/rdkit.Chem.Recap
reading sources... [ 36%] source/rdkit.Chem.ReducedGraphs
reading sources... [ 36%] source/rdkit.Chem.SATIS
reading sources... [ 37%] source/rdkit.Chem.SaltRemover
reading sources... [ 37%] source/rdkit.Chem.Scaffolds
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.MurckoScaffold
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.rdScaffoldNetwork
reading sources... [ 38%] source/rdkit.Chem.ShowMols
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum.Enumerator
reading sources... [ 39%] source/rdkit.Chem.Subshape
reading sources... [ 39%] source/rdkit.Chem.Subshape.BuilderUtils
reading sources... [ 39%] source/rdkit.Chem.Subshape.SubshapeAligner
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeBuilder
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeObjects
reading sources... [ 40%] source/rdkit.Chem.Subshape.testCombined
reading sources... [ 41%] source/rdkit.Chem.Suppliers
reading sources... [ 41%] source/rdkit.Chem.Suppliers.DbMolSupplier
reading sources... [ 41%] source/rdkit.Chem.Suppliers.MolSupplier
reading sources... [ 42%] source/rdkit.Chem.TemplateAlign
reading sources... [ 42%] source/rdkit.Chem.TorsionFingerprints
reading sources... [ 42%] source/rdkit.Chem.fmcs
reading sources... [ 43%] source/rdkit.Chem.fmcs.fmcs
reading sources... [ 43%] source/rdkit.Chem.inchi
reading sources... [ 43%] source/rdkit.Chem.rdChemReactions
reading sources... [ 44%] source/rdkit.Chem.rdChemicalFeatures
reading sources... [ 44%] source/rdkit.Chem.rdCoordGen
reading sources... [ 44%] source/rdkit.Chem.rdDepictor
reading sources... [ 45%] source/rdkit.Chem.rdDistGeom
reading sources... [ 45%] source/rdkit.Chem.rdFMCS
reading sources... [ 45%] source/rdkit.Chem.rdFingerprintGenerator
reading sources... [ 46%] source/rdkit.Chem.rdForceFieldHelpers
reading sources... [ 46%] source/rdkit.Chem.rdFreeSASA
reading sources... [ 46%] source/rdkit.Chem.rdMHFPFingerprint
reading sources... [ 47%] source/rdkit.Chem.rdMMPA
reading sources... [ 47%] source/rdkit.Chem.rdMolAlign
reading sources... [ 47%] source/rdkit.Chem.rdMolCatalog
reading sources... [ 48%] source/rdkit.Chem.rdMolChemicalFeatures
reading sources... [ 48%] source/rdkit.Chem.rdMolDescriptors
reading sources... [ 48%] source/rdkit.Chem.rdMolHash
reading sources... [ 49%] source/rdkit.Chem.rdMolInterchange
reading sources... [ 49%] source/rdkit.Chem.rdMolTransforms
reading sources... [ 49%] source/rdkit.Chem.rdPartialCharges
reading sources... [ 50%] source/rdkit.Chem.rdRGroupDecomposition
reading sources... [ 50%] source/rdkit.Chem.rdReducedGraphs
reading sources... [ 50%] source/rdkit.Chem.rdSLNParse
reading sources... [ 50%] source/rdkit.Chem.rdShapeHelpers
reading sources... [ 51%] source/rdkit.Chem.rdStructChecker
reading sources... [ 51%] source/rdkit.Chem.rdSubstructLibrary
reading sources... [ 51%] source/rdkit.Chem.rdchem
reading sources... [ 52%] source/rdkit.Chem.rdfiltercatalog
reading sources... [ 52%] source/rdkit.Chem.rdfragcatalog
reading sources... [ 52%] source/rdkit.Chem.rdinchi
reading sources... [ 53%] source/rdkit.Chem.rdmolfiles
reading sources... [ 53%] source/rdkit.Chem.rdmolops
reading sources... [ 53%] source/rdkit.Chem.rdqueries
reading sources... [ 54%] source/rdkit.Chem.rdtrajectory
reading sources... [ 54%] source/rdkit.DataManip
reading sources... [ 54%] source/rdkit.DataManip.Metric
reading sources... [ 55%] source/rdkit.DataManip.Metric.rdMetricMatrixCalc
reading sources... [ 55%] source/rdkit.DataStructs
reading sources... [ 55%] source/rdkit.DataStructs.BitEnsemble
reading sources... [ 56%] source/rdkit.DataStructs.BitEnsembleDb
reading sources... [ 56%] source/rdkit.DataStructs.BitUtils
reading sources... [ 56%] source/rdkit.DataStructs.HierarchyVis
reading sources... [ 57%] source/rdkit.DataStructs.LazySignature
reading sources... [ 57%] source/rdkit.DataStructs.TopNContainer
reading sources... [ 57%] source/rdkit.DataStructs.VectCollection
reading sources... [ 58%] source/rdkit.DataStructs.cDataStructs
reading sources... [ 58%] source/rdkit.Dbase
reading sources... [ 58%] source/rdkit.Dbase.DbConnection
reading sources... [ 59%] source/rdkit.Dbase.DbInfo
reading sources... [ 59%] source/rdkit.Dbase.DbModule
reading sources... [ 59%] source/rdkit.Dbase.DbReport
reading sources... [ 60%] source/rdkit.Dbase.DbResultSet
reading sources... [ 60%] source/rdkit.Dbase.DbUtils
reading sources... [ 60%] source/rdkit.Dbase.StorageUtils
reading sources... [ 61%] source/rdkit.DistanceGeometry
reading sources... [ 61%] source/rdkit.DistanceGeometry.DistGeom
reading sources... [ 61%] source/rdkit.ForceField
reading sources... [ 62%] source/rdkit.ForceField.rdForceField
reading sources... [ 62%] source/rdkit.Geometry
reading sources... [ 62%] source/rdkit.Geometry.rdGeometry
reading sources... [ 62%] source/rdkit.ML
reading sources... [ 63%] source/rdkit.ML.AnalyzeComposite
reading sources... [ 63%] source/rdkit.ML.BuildComposite
reading sources... [ 63%] source/rdkit.ML.Cluster
reading sources... [ 64%] source/rdkit.ML.Cluster.Butina
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterUtils
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterVis
reading sources... [ 65%] source/rdkit.ML.Cluster.Clustering
reading sources... [ 65%] source/rdkit.ML.Cluster.Clusters
reading sources... [ 65%] source/rdkit.ML.Cluster.Murtagh
reading sources... [ 66%] source/rdkit.ML.Cluster.Resemblance
reading sources... [ 66%] source/rdkit.ML.Cluster.Standardize
reading sources... [ 66%] source/rdkit.ML.Composite
reading sources... [ 67%] source/rdkit.ML.Composite.AdjustComposite
reading sources... [ 67%] source/rdkit.ML.Composite.BayesComposite
reading sources... [ 67%] source/rdkit.ML.Composite.Composite
reading sources... [ 68%] source/rdkit.ML.CompositeRun
reading sources... [ 68%] source/rdkit.ML.Data
reading sources... [ 68%] source/rdkit.ML.Data.DataUtils
reading sources... [ 69%] source/rdkit.ML.Data.FindQuantBounds
reading sources... [ 69%] source/rdkit.ML.Data.MLData
reading sources... [ 69%] source/rdkit.ML.Data.Quantize
reading sources... [ 70%] source/rdkit.ML.Data.SplitData
reading sources... [ 70%] source/rdkit.ML.Data.Stats
reading sources... [ 70%] source/rdkit.ML.Data.Transforms
reading sources... [ 71%] source/rdkit.ML.DecTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildQuantTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildSigTree
reading sources... [ 72%] source/rdkit.ML.DecTree.CrossValidate
reading sources... [ 72%] source/rdkit.ML.DecTree.DecTree
reading sources... [ 72%] source/rdkit.ML.DecTree.Forest
reading sources... [ 73%] source/rdkit.ML.DecTree.ID3
reading sources... [ 73%] source/rdkit.ML.DecTree.PruneTree
reading sources... [ 73%] source/rdkit.ML.DecTree.QuantTree
reading sources... [ 74%] source/rdkit.ML.DecTree.SigTree
reading sources... [ 74%] source/rdkit.ML.DecTree.Tree
reading sources... [ 74%] source/rdkit.ML.DecTree.TreeUtils
reading sources... [ 75%] source/rdkit.ML.DecTree.TreeVis
reading sources... [ 75%] source/rdkit.ML.DecTree.randomtest
reading sources... [ 75%] source/rdkit.ML.Descriptors
reading sources... [ 75%] source/rdkit.ML.Descriptors.CompoundDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Descriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.MoleculeDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Parser
reading sources... [ 77%] source/rdkit.ML.EnrichPlot
reading sources... [ 77%] source/rdkit.ML.GrowComposite
reading sources... [ 77%] source/rdkit.ML.InfoTheory
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitClusterer
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitRank
reading sources... [ 78%] source/rdkit.ML.InfoTheory.entropy
reading sources... [ 79%] source/rdkit.ML.InfoTheory.rdInfoTheory
reading sources... [ 79%] source/rdkit.ML.KNN
reading sources... [ 79%] source/rdkit.ML.KNN.CrossValidate
reading sources... [ 80%] source/rdkit.ML.KNN.DistFunctions
reading sources... [ 80%] source/rdkit.ML.KNN.KNNClassificationModel
reading sources... [ 80%] source/rdkit.ML.KNN.KNNModel
reading sources... [ 81%] source/rdkit.ML.KNN.KNNRegressionModel
reading sources... [ 81%] source/rdkit.ML.MLUtils
reading sources... [ 81%] source/rdkit.ML.MLUtils.VoteImg
reading sources... [ 82%] source/rdkit.ML.MatOps
reading sources... [ 82%] source/rdkit.ML.ModelPackage
reading sources... [ 82%] source/rdkit.ML.ModelPackage.PackageUtils
reading sources... [ 83%] source/rdkit.ML.ModelPackage.Packager
reading sources... [ 83%] source/rdkit.ML.NaiveBayes
reading sources... [ 83%] source/rdkit.ML.NaiveBayes.ClassificationModel
reading sources... [ 84%] source/rdkit.ML.NaiveBayes.CrossValidate
reading sources... [ 84%] source/rdkit.ML.Neural
reading sources... [ 84%] source/rdkit.ML.Neural.ActFuncs
reading sources... [ 85%] source/rdkit.ML.Neural.CrossValidate
reading sources... [ 85%] source/rdkit.ML.Neural.NetNode
reading sources... [ 85%] source/rdkit.ML.Neural.Network
reading sources... [ 86%] source/rdkit.ML.Neural.Trainers
reading sources... [ 86%] source/rdkit.ML.SLT
reading sources... [ 86%] source/rdkit.ML.SLT.Risk
reading sources... [ 87%] source/rdkit.ML.Scoring
reading sources... [ 87%] source/rdkit.ML.Scoring.Scoring
reading sources... [ 87%] source/rdkit.ML.ScreenComposite
reading sources... [ 87%] source/rdkit.ML.files
reading sources... [ 88%] source/rdkit.Numerics
reading sources... [ 88%] source/rdkit.Numerics.rdAlignment
reading sources... [ 88%] source/rdkit.RDConfig
reading sources... [ 89%] source/rdkit.RDLogger
reading sources... [ 89%] source/rdkit.RDPaths
reading sources... [ 89%] source/rdkit.RDRandom
reading sources... [ 90%] source/rdkit.SimDivFilters
reading sources... [ 90%] source/rdkit.SimDivFilters.SimilarityPickers
reading sources... [ 90%] source/rdkit.SimDivFilters.rdSimDivPickers
reading sources... [ 91%] source/rdkit.TestRunner
reading sources... [ 91%] source/rdkit.VLib
reading sources... [ 91%] source/rdkit.VLib.Filter
reading sources... [ 92%] source/rdkit.VLib.Node
reading sources... [ 92%] source/rdkit.VLib.NodeLib
reading sources... [ 92%] source/rdkit.VLib.NodeLib.DbMolSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.DbPickleSupplier
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SDSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SmartsMolFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmartsRemover
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesDupeFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesOutput
reading sources... [ 95%] source/rdkit.VLib.NodeLib.SmilesSupply
reading sources... [ 95%] source/rdkit.VLib.NodeLib.demo
reading sources... [ 95%] source/rdkit.VLib.Output
reading sources... [ 96%] source/rdkit.VLib.Supply
reading sources... [ 96%] source/rdkit.VLib.Transform
reading sources... [ 96%] source/rdkit.rdBase
reading sources... [ 97%] source/rdkit.six
reading sources... [ 97%] source/rdkit.utils
reading sources... [ 97%] source/rdkit.utils.cactvs
reading sources... [ 98%] source/rdkit.utils.chemdraw
reading sources... [ 98%] source/rdkit.utils.chemdraw_qax
reading sources... [ 98%] source/rdkit.utils.chemutils
reading sources... [ 99%] source/rdkit.utils.comhack
reading sources... [ 99%] source/rdkit.utils.fileutils
reading sources... [ 99%] source/rdkit.utils.listutils
reading sources... [100%] source/rdkit.utils.spiral

/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:28: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:120: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:120: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:122: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:126: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:127: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:127: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:129: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:133: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:134: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:134: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:136: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:140: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:141: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:141: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:143: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:147: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:148: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:148: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:150: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:154: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:155: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:155: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:157: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:161: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:162: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:162: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:164: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:184: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:188: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:210: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:233: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:241: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:242: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:253: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:270: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:273: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:276: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:277: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:292: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:293: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:304: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:313: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:314: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:325: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:358: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:358: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:360: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:368: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:374: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:377: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:378: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:383: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:388: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:389: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:393: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:394: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:397: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:398: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:400: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:403: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:405: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:415: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:415: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:417: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:424: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:425: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:425: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:427: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:434: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:435: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:435: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:437: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:444: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:445: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:445: WARNING: Unexpected section title or transition.

-------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:447: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:457: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:457: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:459: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:463: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:464: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:464: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:466: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:474: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:474: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:476: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:487: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:487: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:489: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:496: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:497: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:497: WARNING: Unexpected section title or transition.

------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:499: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:512: WARNING: Unexpected section title or transition.

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:513: WARNING: Unexpected section title or transition.

----------------------
/<<PKGBUILDDIR>>/Docs/Book/Cartridge.md:515: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:109: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:91: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:111: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:113: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:116: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:117: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:117: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:147: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:147: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:147: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:153: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:157: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:157: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:188: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:186: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:186: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:189: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:191: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:199: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:197: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:197: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:200: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:202: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:221: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:213: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:213: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:223: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:238: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:235: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:235: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:240: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:242: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:243: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:256: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:256: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:256: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:263: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:261: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:264: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:266: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:267: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:287: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:275: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:275: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:289: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:290: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:291: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:300: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:297: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:301: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:301: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:301: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:336: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:336: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:336: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:340: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:343: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:343: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:343: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:372: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:372: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:384: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:387: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:388: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:394: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:394: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:394: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:408: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:400: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:412: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:414: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:415: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:419: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:419: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:419: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:437: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:437: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:452: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:454: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:455: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:459: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:459: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:459: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:478: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:464: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:483: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:485: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:489: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:489: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:489: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:498: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:502: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:537: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:537: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:534: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:539: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:539: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:539: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:546: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:546: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:558: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:560: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:561: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:562: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:566: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:566: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:567: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:584: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:574: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:574: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:584: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:584: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:585: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:585: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:585: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:602: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:599: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:599: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:615: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:603: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:615: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:617: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:622: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:619: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:619: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:623: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:626: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:626: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:628: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:631: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:631: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:644: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:638: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:638: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:638: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:646: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:648: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:653: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:651: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:651: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:655: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:653: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:655: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:655: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:659: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:660: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:660: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:672: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:672: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:681: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:682: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:684: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:684: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:686: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:690: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:706: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:692: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:707: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:718: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:709: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:709: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:709: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:719: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:741: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:726: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:743: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:745: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:798: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:798: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:798: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:807: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:830: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:875: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:856: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:856: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:876: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:878: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:878: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:898: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:916: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:914: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:914: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:919: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:922: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:922: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:924: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:970: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:984: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:984: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1019: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1019: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1019: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1035: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1031: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1052: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1036: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1052: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1052: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1056: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1056: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1093: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1093: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1124: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1124: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1124: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1128: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1136: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1138: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1139: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1141: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1143: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1192: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1204: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1204: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1197: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1193: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1198: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1206: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1206: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1206: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1248: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1259: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1259: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1249: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1261: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1261: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1261: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1276: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1265: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1277: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1279: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1280: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1280: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1300: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1295: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1303: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1305: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1307: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1308: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1310: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1315: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1325: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1323: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1326: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1328: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1329: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1329: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1341: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1334: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1342: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1347: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1344: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1348: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1350: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1359: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1352: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1360: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1365: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1362: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1366: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1372: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1368: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1373: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1375: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1393: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1384: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1394: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1399: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1396: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1400: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1405: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1402: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1406: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1408: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1419: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1410: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1420: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1425: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1422: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1426: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1431: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1428: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1432: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1434: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1450: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1436: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1451: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1453: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1457: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1455: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1455: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1455: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1458: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1460: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1490: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1470: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1470: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1470: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1492: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1493: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1494: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1497: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1498: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1500: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1515: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1501: WARNING: Inline emphasis start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1518: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1519: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1521: WARNING: Definition list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInC++.md:1522: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:2985: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:20: WARNING: Inconsistent literal block quoting.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:20: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:20: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:80: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:77: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:84: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:84: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:84: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:120: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:115: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:126: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:126: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:126: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:207: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:248: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:371: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:376: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:376: WARNING: Inline literal start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:376: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:450: WARNING: Inline interpreted text or phrase reference start-string without end-string.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:486: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:487: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:488: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:489: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Install.md:494: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Overview.md:20: WARNING: Unexpected indentation.
/<<PKGBUILDDIR>>/Docs/Book/Overview.md:32: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/Overview.md:55: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:368: WARNING: Malformed table.
Text in column margin in table line 15.

=========  =========================================  ===============  ======  =========
Primitive                  Property                   "Default value"  Range?    Notes
=========  =========================================  ===============  ======  =========
a          "aromatic atom"
A          "aliphatic atom"
D          "explicit degree"                          1                Y
h          "number of implicit hs"                    >0               Y
H          "total number of Hs"                       1
r          "size of smallest SSSR ring"               >0               Y
R          "number of SSSR rings"                     >0               Y
v          "total valence"                            1                Y
x          "number of ring bonds"                     >0               Y
X          "total degree"                             1                Y
z          "number of heteroatom neighbors"           >0               Y       extension
Z          "number of aliphatic heteroatom neighbors" >0               Y       extension
\*         "any atom"
\+         "positive charge"                          1                Y
++         "+2 charge"
\-         "negative charge"                          1                Y
\--        "-2 charge"
^0         "S hybridized"                             n/a              N       extension
^1         "SP hybridized"                            n/a              N       extension
^2         "SP2 hybridized"                           n/a              N       extension
^3         "SP3 hybridized"                           n/a              N       extension
^4         "SP3D hybridized"                          n/a              N       extension
^5         "SP3D2 hybridized"                         n/a              N       extension
=========  =========================================  ===============  ======  =========
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:1394: WARNING: Bullet list ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/index.rst:9: WARNING: toctree contains reference to nonexisting document 'Cookbook'
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.DSViewer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDraw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.LazyGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.rdScaffoldNetwork' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.testCombined' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMHFPFingerprint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdStructChecker' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.HierarchyVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.randomtest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDLogger' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDRandom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'TestRunner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Filter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Node' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.demo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Output' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Supply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Transform' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdBase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'six' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.cactvs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw_qax' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.comhack' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.fileutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.listutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.spiral' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /<<PKGBUILDDIR>>/Docs/Book/data/README.md: WARNING: document isn't included in any toctree
/<<PKGBUILDDIR>>/Docs/Book/source/modules.rst: WARNING: document isn't included in any toctree
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.MolDraw.rdMolDraw2D.rst: WARNING: document isn't included in any toctree
done
processing RDKit.tex... index Overview Install GettingStartedInPython RDKit_Book Cartridge BackwardsIncompatibleChanges api-docs source/rdkit source/rdkit.Avalon source/rdkit.Avalon.pyAvalonTools source/rdkit.Chem source/rdkit.Chem.AtomPairs source/rdkit.Chem.AtomPairs.Pairs source/rdkit.Chem.AtomPairs.Sheridan source/rdkit.Chem.AtomPairs.Torsions source/rdkit.Chem.AtomPairs.Utils source/rdkit.Chem.ChemUtils source/rdkit.Chem.ChemUtils.AlignDepict source/rdkit.Chem.ChemUtils.BulkTester source/rdkit.Chem.ChemUtils.DescriptorUtilities source/rdkit.Chem.ChemUtils.SDFToCSV source/rdkit.Chem.ChemUtils.TemplateExpand source/rdkit.Chem.Draw source/rdkit.Chem.Draw.IPythonConsole source/rdkit.Chem.Draw.MolDrawing source/rdkit.Chem.Draw.SimilarityMaps source/rdkit.Chem.Draw.rdMolDraw2D source/rdkit.Chem.Draw.aggCanvas source/rdkit.Chem.Draw.cairoCanvas source/rdkit.Chem.Draw.canvasbase source/rdkit.Chem.Draw.mplCanvas source/rdkit.Chem.Draw.qtCanvas source/rdkit.Chem.EState source/rdkit.Chem.EState.AtomTypes source/rdkit.Chem.EState.EState source/rdkit.Chem.EState.EState_VSA source/rdkit.Chem.EState.Fingerprinter source/rdkit.Chem.FeatMaps source/rdkit.Chem.FeatMaps.FeatMapParser source/rdkit.Chem.FeatMaps.FeatMapPoint source/rdkit.Chem.FeatMaps.FeatMapUtils source/rdkit.Chem.FeatMaps.FeatMaps source/rdkit.Chem.Features source/rdkit.Chem.Features.FeatDirUtilsRD source/rdkit.Chem.Features.ShowFeats source/rdkit.Chem.Fingerprints source/rdkit.Chem.Fingerprints.ClusterMols source/rdkit.Chem.Fingerprints.DbFpSupplier source/rdkit.Chem.Fingerprints.FingerprintMols source/rdkit.Chem.Fingerprints.MolSimilarity source/rdkit.Chem.Fingerprints.SimilarityScreener source/rdkit.Chem.Fraggle source/rdkit.Chem.Fraggle.FraggleSim source/rdkit.Chem.MolDb source/rdkit.Chem.MolDb.FingerprintUtils source/rdkit.Chem.MolDb.Loader source/rdkit.Chem.MolDb.Loader_orig source/rdkit.Chem.MolDb.Loader_sa source/rdkit.Chem.MolKey source/rdkit.Chem.MolKey.InchiInfo source/rdkit.Chem.MolKey.MolKey source/rdkit.Chem.Pharm2D source/rdkit.Chem.Pharm2D.Generate source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D source/rdkit.Chem.Pharm2D.LazyGenerator source/rdkit.Chem.Pharm2D.Matcher source/rdkit.Chem.Pharm2D.SigFactory source/rdkit.Chem.Pharm2D.Utils source/rdkit.Chem.Pharm3D source/rdkit.Chem.Pharm3D.EmbedLib source/rdkit.Chem.Pharm3D.ExcludedVolume source/rdkit.Chem.Pharm3D.Pharmacophore source/rdkit.Chem.Scaffolds source/rdkit.Chem.Scaffolds.MurckoScaffold source/rdkit.Chem.Scaffolds.rdScaffoldNetwork source/rdkit.Chem.SimpleEnum source/rdkit.Chem.SimpleEnum.Enumerator source/rdkit.Chem.Subshape source/rdkit.Chem.Subshape.BuilderUtils source/rdkit.Chem.Subshape.SubshapeAligner source/rdkit.Chem.Subshape.SubshapeBuilder source/rdkit.Chem.Subshape.SubshapeObjects source/rdkit.Chem.Subshape.testCombined source/rdkit.Chem.Suppliers source/rdkit.Chem.Suppliers.DbMolSupplier source/rdkit.Chem.Suppliers.MolSupplier source/rdkit.Chem.fmcs source/rdkit.Chem.fmcs.fmcs source/rdkit.Chem.AllChem source/rdkit.Chem.BRICS source/rdkit.Chem.BuildFragmentCatalog source/rdkit.Chem.ChemicalFeatures source/rdkit.Chem.ChemicalForceFields source/rdkit.Chem.Crippen source/rdkit.Chem.DSViewer source/rdkit.Chem.Descriptors source/rdkit.Chem.Descriptors3D source/rdkit.Chem.EnumerateHeterocycles source/rdkit.Chem.EnumerateStereoisomers source/rdkit.Chem.FastSDMolSupplier source/rdkit.Chem.FeatFinderCLI source/rdkit.Chem.FilterCatalog source/rdkit.Chem.FragmentCatalog source/rdkit.Chem.FragmentMatcher source/rdkit.Chem.Fragments source/rdkit.Chem.FunctionalGroups source/rdkit.Chem.GraphDescriptors source/rdkit.Chem.Graphs source/rdkit.Chem.Lipinski source/rdkit.Chem.MACCSkeys source/rdkit.Chem.MCS source/rdkit.Chem.MolCatalog source/rdkit.Chem.MolStandardize source/rdkit.Chem.MolStandardize.rdMolStandardize source/rdkit.Chem.MolSurf source/rdkit.Chem.PandasTools source/rdkit.Chem.PeriodicTable source/rdkit.Chem.PropertyMol source/rdkit.Chem.PyMol source/rdkit.Chem.QED source/rdkit.Chem.Randomize source/rdkit.Chem.Recap source/rdkit.Chem.ReducedGraphs source/rdkit.Chem.SATIS source/rdkit.Chem.SaltRemover source/rdkit.Chem.ShowMols source/rdkit.Chem.TemplateAlign source/rdkit.Chem.TorsionFingerprints source/rdkit.Chem.inchi source/rdkit.Chem.rdchem source/rdkit.Chem.rdDistGeom source/rdkit.Chem.rdqueries source/rdkit.Chem.rdFMCS source/rdkit.Chem.rdMolAlign source/rdkit.Chem.rdMolHash source/rdkit.Chem.rdReducedGraphs source/rdkit.Chem.rdtrajectory source/rdkit.Chem.rdMolTransforms source/rdkit.Chem.rdmolfiles source/rdkit.Chem.rdPartialCharges source/rdkit.Chem.rdMolCatalog source/rdkit.Chem.rdCoordGen source/rdkit.Chem.rdMolChemicalFeatures source/rdkit.Chem.rdMMPA source/rdkit.Chem.rdRGroupDecomposition source/rdkit.Chem.rdForceFieldHelpers source/rdkit.Chem.rdDepictor source/rdkit.Chem.rdChemicalFeatures source/rdkit.Chem.rdmolops source/rdkit.Chem.rdFreeSASA source/rdkit.Chem.rdMolInterchange source/rdkit.Chem.rdShapeHelpers source/rdkit.Chem.rdinchi source/rdkit.Chem.rdChemReactions source/rdkit.Chem.rdSubstructLibrary source/rdkit.Chem.rdfiltercatalog source/rdkit.Chem.rdfragcatalog source/rdkit.Chem.rdStructChecker source/rdkit.Chem.rdMolDescriptors source/rdkit.Chem.rdFingerprintGenerator source/rdkit.Chem.rdMHFPFingerprint source/rdkit.Chem.rdSLNParse source/rdkit.DataManip source/rdkit.DataManip.Metric source/rdkit.DataManip.Metric.rdMetricMatrixCalc source/rdkit.DataStructs source/rdkit.DataStructs.BitEnsemble source/rdkit.DataStructs.BitEnsembleDb source/rdkit.DataStructs.BitUtils source/rdkit.DataStructs.HierarchyVis source/rdkit.DataStructs.LazySignature source/rdkit.DataStructs.TopNContainer source/rdkit.DataStructs.VectCollection source/rdkit.DataStructs.cDataStructs source/rdkit.Dbase source/rdkit.Dbase.DbConnection source/rdkit.Dbase.DbInfo source/rdkit.Dbase.DbModule source/rdkit.Dbase.DbReport source/rdkit.Dbase.DbResultSet source/rdkit.Dbase.DbUtils source/rdkit.Dbase.StorageUtils source/rdkit.DistanceGeometry source/rdkit.DistanceGeometry.DistGeom source/rdkit.ForceField source/rdkit.ForceField.rdForceField source/rdkit.Geometry source/rdkit.Geometry.rdGeometry source/rdkit.ML source/rdkit.ML.Cluster source/rdkit.ML.Cluster.Butina source/rdkit.ML.Cluster.ClusterUtils source/rdkit.ML.Cluster.ClusterVis source/rdkit.ML.Cluster.Clusters source/rdkit.ML.Cluster.Murtagh source/rdkit.ML.Cluster.Resemblance source/rdkit.ML.Cluster.Standardize source/rdkit.ML.Cluster.Clustering source/rdkit.ML.Composite source/rdkit.ML.Composite.AdjustComposite source/rdkit.ML.Composite.BayesComposite source/rdkit.ML.Composite.Composite source/rdkit.ML.Data source/rdkit.ML.Data.DataUtils source/rdkit.ML.Data.FindQuantBounds source/rdkit.ML.Data.MLData source/rdkit.ML.Data.Quantize source/rdkit.ML.Data.SplitData source/rdkit.ML.Data.Stats source/rdkit.ML.Data.Transforms source/rdkit.ML.DecTree source/rdkit.ML.DecTree.BuildQuantTree source/rdkit.ML.DecTree.BuildSigTree source/rdkit.ML.DecTree.CrossValidate source/rdkit.ML.DecTree.DecTree source/rdkit.ML.DecTree.Forest source/rdkit.ML.DecTree.ID3 source/rdkit.ML.DecTree.PruneTree source/rdkit.ML.DecTree.QuantTree source/rdkit.ML.DecTree.SigTree source/rdkit.ML.DecTree.Tree source/rdkit.ML.DecTree.TreeUtils source/rdkit.ML.DecTree.TreeVis source/rdkit.ML.DecTree.randomtest source/rdkit.ML.Descriptors source/rdkit.ML.Descriptors.CompoundDescriptors source/rdkit.ML.Descriptors.Descriptors source/rdkit.ML.Descriptors.MoleculeDescriptors source/rdkit.ML.Descriptors.Parser source/rdkit.ML.InfoTheory source/rdkit.ML.InfoTheory.BitClusterer source/rdkit.ML.InfoTheory.BitRank source/rdkit.ML.InfoTheory.entropy source/rdkit.ML.InfoTheory.rdInfoTheory source/rdkit.ML.KNN source/rdkit.ML.KNN.CrossValidate source/rdkit.ML.KNN.DistFunctions source/rdkit.ML.KNN.KNNClassificationModel source/rdkit.ML.KNN.KNNModel source/rdkit.ML.KNN.KNNRegressionModel source/rdkit.ML.MLUtils source/rdkit.ML.MLUtils.VoteImg source/rdkit.ML.ModelPackage source/rdkit.ML.ModelPackage.PackageUtils source/rdkit.ML.ModelPackage.Packager source/rdkit.ML.NaiveBayes source/rdkit.ML.NaiveBayes.ClassificationModel source/rdkit.ML.NaiveBayes.CrossValidate source/rdkit.ML.Neural source/rdkit.ML.Neural.ActFuncs source/rdkit.ML.Neural.CrossValidate source/rdkit.ML.Neural.NetNode source/rdkit.ML.Neural.Network source/rdkit.ML.Neural.Trainers source/rdkit.ML.SLT source/rdkit.ML.SLT.Risk source/rdkit.ML.Scoring source/rdkit.ML.Scoring.Scoring source/rdkit.ML.AnalyzeComposite source/rdkit.ML.BuildComposite source/rdkit.ML.CompositeRun source/rdkit.ML.EnrichPlot source/rdkit.ML.GrowComposite source/rdkit.ML.MatOps source/rdkit.ML.ScreenComposite source/rdkit.ML.files source/rdkit.Numerics source/rdkit.Numerics.rdAlignment source/rdkit.SimDivFilters source/rdkit.SimDivFilters.SimilarityPickers source/rdkit.SimDivFilters.rdSimDivPickers source/rdkit.VLib source/rdkit.VLib.NodeLib source/rdkit.VLib.NodeLib.DbMolSupply source/rdkit.VLib.NodeLib.DbPickleSupplier source/rdkit.VLib.NodeLib.SDSupply source/rdkit.VLib.NodeLib.SmartsMolFilter source/rdkit.VLib.NodeLib.SmartsRemover source/rdkit.VLib.NodeLib.SmilesDupeFilter source/rdkit.VLib.NodeLib.SmilesOutput source/rdkit.VLib.NodeLib.SmilesSupply source/rdkit.VLib.NodeLib.demo source/rdkit.VLib.Filter source/rdkit.VLib.Node source/rdkit.VLib.Output source/rdkit.VLib.Supply source/rdkit.VLib.Transform source/rdkit.utils source/rdkit.utils.cactvs source/rdkit.utils.chemdraw source/rdkit.utils.chemdraw_qax source/rdkit.utils.chemutils source/rdkit.utils.comhack source/rdkit.utils.fileutils source/rdkit.utils.listutils source/rdkit.utils.spiral source/rdkit.rdBase source/rdkit.RDConfig source/rdkit.RDLogger source/rdkit.RDPaths source/rdkit.RDRandom source/rdkit.TestRunner source/rdkit.six GettingStartedInC++ 
resolving references...
done
writing... done
copying images... [  2%] images/picture_1.png
copying images... [  4%] images/picture_0.png
copying images... [  6%] images/picture_3.png
copying images... [  8%] images/picture_2.png
copying images... [ 10%] images/picture_4.png
copying images... [ 12%] images/cdk2_mol1.png
copying images... [ 14%] images/cdk2_mol2.png
copying images... [ 16%] images/cdk2_molgrid.png
copying images... [ 18%] images/cdk2_molgrid_aligned.png
copying images... [ 20%] images/atom_highlights_1.png
copying images... [ 22%] images/atom_highlights_2.png
copying images... [ 24%] images/atom_highlights_3.png
copying images... [ 26%] images/atom_annotation_1.png
copying images... [ 28%] images/substruct_search_parameters1.png
copying images... [ 30%] images/mfp2_bit872.svg
copying images... [ 32%] images/rdk_bit1553.svg
copying images... [ 34%] images/rdk_bit1553_2.svg
copying images... [ 36%] images/similarity_map_fp1.png
copying images... [ 38%] images/similarity_map_fp2.png
copying images... [ 40%] images/similarity_map_fp3.png
copying images... [ 42%] images/similarity_map_charges.png
copying images... [ 44%] images/similarity_map_crippen.png
copying images... [ 46%] images/picture_6.png
copying images... [ 48%] images/picture_5.png
copying images... [ 50%] images/picture_9.png
copying images... [ 52%] images/picture_8.png
copying images... [ 54%] images/picture_7.png
copying images... [ 56%] images/picture_10.png
copying images... [ 58%] images/picture_12.png
copying images... [ 60%] images/picture_11.png
copying images... [ 62%] images/picture_10.jpg
copying images... [ 64%] ../Code/images/enhanced_stereo_and1_and2_base.png
copying images... [ 66%] ../Code/images/enhanced_stereo_and1_and2_expand.png
copying images... [ 68%] ../Code/images/enhanced_stereo_and1_cis_base.png
copying images... [ 70%] ../Code/images/enhanced_stereo_and1_cis_expand.png
copying images... [ 72%] ../Code/images/enhanced_stereo_and1_trans_base.png
copying images... [ 74%] ../Code/images/enhanced_stereo_and1_trans_expand.png
copying images... [ 76%] ../Code/images/enhanced_stereo_or1_or2_base.png
copying images... [ 78%] ../Code/images/enhanced_stereo_or1_cis_base.png
copying images... [ 80%] ../Code/images/enhanced_stereo_or1_trans_base.png
copying images... [ 82%] ../Code/images/enhanced_stereo_abs_and_base.png
copying images... [ 84%] ../Code/images/enhanced_stereo_abs_and_expand.png
copying images... [ 86%] ../Code/images/enhanced_stereo_abs_or_base.png
copying images... [ 88%] ./images/EnhancedStereoSSS_molA.png
copying images... [ 90%] ./images/EnhancedStereoSSS_molB.png
copying images... [ 92%] ./images/EnhancedStereoSSS_molC.png
copying images... [ 94%] ./images/EnhancedStereoSSS_molD.png
copying images... [ 96%] ./images/EnhancedStereoSSS_molE.png
copying images... [ 98%] ./images/EnhancedStereoSSS_molF.png
copying images... [100%] ./images/EnhancedStereoSSS_molG.png

copying TeX support files... copying TeX support files...
done
build succeeded, 852 warnings.

The LaTeX files are in _build/latex.
Run 'make' in that directory to run these through (pdf)latex
(use `make latexpdf' here to do that automatically).
Running LaTeX files through pdflatex...
make -C _build/latex all-pdf
make[3]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book/_build/latex'
latexmk -pdf -dvi- -ps-  'RDKit.tex'
Rc files read:
  /etc/LatexMk
  ./latexmkrc
Latexmk: This is Latexmk, John Collins, 29 September 2020, version: 4.70b.
Rule 'pdflatex': The following rules & subrules became out-of-date:
      'pdflatex'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'pdflatex   -recorder  "RDKit.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./RDKit.tex
LaTeX2e <2020-02-02> patch level 5
L3 programming layer <2020-09-24> (./sphinxmanual.cls
Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual)
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty<<t1.cmap>>)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def
(/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def))
(/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)
(./sphinxmulticell.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
(./footnotehyper-sphinx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty)
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
(./sphinxhighlight.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(./sphinxmessages.sty)
Writing index file RDKit.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)
(./RDKit.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<<ot1.cmap>><<oml.cmap
>><<oms.cmap>><<omx.cmap>>
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] [1] [2]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Underfull \hbox (badness 10000) in paragraph at lines 177--178
[]\T1/ptm/m/n/10 [stk]([][]$https : / / github . com / lukasturcani / stk$[][])
 ([docs]([][]$https : / / lukasturcani . github . io / stk / docs / build / htm
l/$[][]), [pa-
[1] [2] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.

(/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 290--291
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 bash Miniconda3-latest-MacOSX-x86_64.sh con
da install numpy matplotlib conda

Underfull \hbox (badness 10000) in paragraph at lines 290--291
\T1/pcr/m/n/10 install cmake cairo pillow eigen pkg-config conda install boost-
cpp boost

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Underfull \hbox (badness 10000) in paragraph at lines 307--308
[]\T1/ptm/m/n/10 -DRDK_BUILD_AVALON_SUPPORT=ON -DRDK_BUILD_CAIRO_SUPPORT=ON -

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 316--317
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 RDBASE=$RDBASE DYLD_FALLBACK_LIBRARY_PATH="
$RDBASE/lib:$PYROOT/lib"
[3]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 331--332
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 bash Anaconda3-5.2.0-x86_64.sh conda instal
l -y cmake cairo pillow eigen

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Underfull \hbox (badness 10000) in paragraph at lines 348--349
[]\T1/ptm/m/n/10 -DRDK_INSTALL_INTREE=ON -DRDK_INSTALL_STATIC_LIBS=OFF -

Underfull \hbox (badness 5504) in paragraph at lines 348--349
\T1/ptm/m/n/10 DRDK_BUILD_CPP_TESTS=ON -DPYTHON_NUMPY_INCLUDE_PATH=^^Q$(python 
-c `im-port

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 369--370
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [conda folder]/envs/my-rdkit-env/bin/initdb
 -D /folder/where/data/should/be/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 375--376
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [conda folder]/envs/my-rdkit-env/bin/postgr
es -D /folder/where/data/should/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 384--385
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [program:postgresql] command=[conda folder]
/envs/my-rdkit-env/bin/postgres

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[4]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[5]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 488--489
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 shellsession $ wget https://github.com/rdkit
/rdkit/archive/Release_XXXX_XX_X.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 558--559
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 cmake -D PYTHON_LIBRARY=/usr/lib/python3.6/
config/libpython3.6.a -D

Underfull \hbox (badness 10000) in paragraph at lines 558--559
\T1/pcr/m/n/10 PYTHON_INCLUDE_DIR=/usr/include/python3.6/ -D PYTHON_EXECUTABLE=
/usr/bin/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[6]
Underfull \hbox (badness 10000) in paragraph at lines 576--577
[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment \T1/ptm/m/it/10 -

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 619--620
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 $ CLASSPATH=$CLASSPATH:$RDBASE/Code/JavaWra
ppers/gmwrapper/org.RDKit.jar

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 jython -Djava.library.path=$RDBASE/Code/JavaWrappers/gmwrapper J
ython 2.2.1 on

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 java1.6.0_20 Type "copyright", "credits" or "license" for more i
nformation.

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 >>> from org.RDKit import * >>> from java import lang >>> lang.S
ystem.

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 loadLibrary(\TS1/pcr/m/n/10 '\T1/pcr/m/n/10 GraphMolWrap\TS1/pcr
/m/n/10 '\T1/pcr/m/n/10 ) >>> m = RWMol.MolFromSmiles(\TS1/pcr/m/n/10 '\T1/pcr/
m/n/10 c1ccccc1\TS1/pcr/m/n/10 '\T1/pcr/m/n/10 ) >>> m.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 640--641
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 Linking CXX shared library libSLNParse.so /
usr/bin/ld: .../

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 libboost_regex.a(cpp_regex_traits.o): relocation R_X86_64_32S ag
ainst

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 std::basic_string<char, std::char_traits<char>
, std::allocator<char>

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 >::_Rep::_S_empty_rep_storage\TS1/pcr/m/n/10 ' \T1/pcr/m/n/10 ca
n not be used when making a shared object;

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 recompile with -fPIC .../libboost_regex.a: could not read symbol
s: Bad value

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 collect2: ld returned 1 exit status make[2]: *** [Code/GraphMol/
SLNParse/

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 libSLNParse.so] Error 1 make[1]: *** [Code/GraphMol/SLNParse/CMa
keFiles/
[7]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Overfull \hbox (34.06519pt too wide) in paragraph at lines 654--657
[]\TS1/cmr/b/n/10 ``[]\TS1/cmr/m/n/10 ` \T1/ptm/m/n/10 .../Code/GraphMol/Wrap/E
ditableMol.cpp:114: in-stan-ti-ated from here .../boost/type_traits/detail/cv_t
raits_impl.hpp:37:

Underfull \hbox (badness 10000) in paragraph at lines 659--660
[]\T1/ptm/m/n/10 Please sub-mit a full bug re-port, with pre-pro-cessed source 
if ap-pro-pri-ate. See

Underfull \hbox (badness 10000) in paragraph at lines 659--660
\T1/ptm/m/n/10 <URL:<[][]$http : / / bugzilla . redhat . com / bugzilla$[][]>> 
for in-struc-tions. Pre-pro-cessed source

Underfull \hbox (badness 6792) in paragraph at lines 659--660
\T1/ptm/m/n/10 stored into /tmp/ccgSaXge.out file, please at-tach this to your 
bu-gre-port. make[2]: \T1/ptm/b/n/10 *

Underfull \hbox (badness 10000) in paragraph at lines 659--660
\T1/ptm/b/n/10 [Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o] Er-
ror 1 make[1]:\T1/ptm/m/n/10 *

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 706--707
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 export MACOSX_DEPLOYMENT_TARGET=10.6 export
 LDFLAGS="-Wall -undefined

Underfull \hbox (badness 10000) in paragraph at lines 706--707
\T1/pcr/m/n/10 dynamic_lookup -bundle -arch x86_64" export CFLAGS="-arch x86_64
" ln -s /usr/

Underfull \hbox (badness 10000) in paragraph at lines 706--707
\T1/pcr/m/n/10 bin/gcc /usr/bin/gcc-4.2 ln -s /usr/bin/g++ /usr/bin/g++-4.2 pyt
hon setup.py

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 712--713
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 PYTHON_NUMPY_INCLUDE_PATH /Library/Python/2
.6/site-packages/numpy/core/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[8]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 759.

[9]
Underfull \hbox (badness 10000) in paragraph at lines 826--827
[]\T1/ptm/m/it/10 cmake -DRDK_BUILD_PYTHON_WRAPPERS=ON -DBOOST_ROOT=C:/boost -

Underfull \hbox (badness 10000) in paragraph at lines 826--827
\T1/ptm/m/it/10 DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_BUILD_AVALON_SUPPORT=ON -

Underfull \hbox (badness 10000) in paragraph at lines 826--827
\T1/ptm/m/it/10 DRDK_BUILD_PGSQL=ON -DPostgreSQL_ROOT=^^QC:Program File-sPost-g
reSQL9.5^^Q -G^^QVisual
[10]
Chapter 1.
[11]
Underfull \hbox (badness 10000) in paragraph at lines 936--937
[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
[12] [13]

LaTeX Warning: Hyper reference `GettingStartedInPython:chem-vs-allchem' on page
 14 undefined on input line 1115.

[14] [15] [16] [17]

LaTeX Warning: Hyper reference `GettingStartedInPython:the-sssr-problem' on pag
e 18 undefined on input line 1330.

[18] [19]
Underfull \hbox (badness 10000) in paragraph at lines 1463--1465
[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

Underfull \hbox (badness 7649) in paragraph at lines 1463--1465
\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.

Underfull \hbox (badness 10000) in paragraph at lines 1483--1488
[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
[20 <./picture_1.png (PNG copy)> <./picture_0.png (PNG copy)> <./picture_3.png 
(PNG copy)> <./picture_2.png> <./picture_4.png>] [21] [22] [23 <./cdk2_mol1.png
> <./cdk2_mol2.png>] [24 <./cdk2_molgrid.png (PNG copy)>]
Underfull \vbox (badness 2707) detected at line 1787
[25 <./cdk2_molgrid_aligned.png (PNG copy)>] [26 <./atom_highlights_1.png>]
[27 <./atom_highlights_2.png> <./atom_highlights_3.png>]
Overfull \vbox (1.09758pt too high) detected at line 1883
[28 <./atom_annotation_1.png>] [29]

LaTeX Warning: Hyper reference `GettingStartedInPython:chemical-reactions' on p
age 30 undefined on input line 1957.

[30] [31] [32 <./substruct_search_parameters1.png>]

LaTeX Warning: Hyper reference `GettingStartedInPython:chemical-reactions' on p
age 33 undefined on input line 2088.

[33] [34] [35] [36] [37] [38]

LaTeX Warning: Hyper reference `GettingStartedInPython:feature-definitions-used
-in-the-morgan-fingerprints' on page 39 undefined on input line 2519.

[39] [40] [41 <./mfp2_bit872.png> <./rdk_bit1553.png>] [42 <./rdk_bit1553_2.png
>] [43] [44 <./similarity_map_fp1.png>] [45 <./similarity_map_fp2.png>]

LaTeX Warning: Hyper reference `GettingStartedInPython:list-of-available-descri
ptors' on page 46 undefined on input line 2868.

[46 <./similarity_map_fp3.png>] [47] [48 <./similarity_map_charges.png>]

LaTeX Warning: Hyper reference `RDKit_Book::doc' on page 49 undefined on input 
line 2931.

[49 <./similarity_map_crippen.png>] [50] [51] [52] [53] [54] [55]

LaTeX Warning: Hyper reference `RDKit_Book::doc' on page 56 undefined on input 
line 3356.

[56] [57] [58]
Underfull \hbox (badness 6792) in paragraph at lines 3599--3602
[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
[59] [60] [61] [62 <./picture_6.png>] [63]
Underfull \hbox (badness 10000) in paragraph at lines 3979--3983
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Underfull \hbox (badness 10000) in paragraph at lines 3989--3993
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Overfull \hbox (26.64615pt too wide) in paragraph at lines 4057--4058
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}Rings| 

Overfull \hbox (91.89552pt too wide) in paragraph at lines 4062--4063
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}{Hetero,Carbo}cycles| 

Underfull \hbox (badness 10000) in paragraph at lines 4091--4094
[]|\T1/ptm/m/n/10 Number of bridge-head atoms

Underfull \hbox (badness 10000) in paragraph at lines 4119--4122
\T1/ptm/m/n/10 tions [][]$http : / / www . chemcomp . com /

Underfull \hbox (badness 10000) in paragraph at lines 4128--4132
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4138--4142
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4174--4177
[]|\T1/ptm/m/n/10 implemented us-ing a set of

Underfull \hbox (badness 10000) in paragraph at lines 4174--4177
\T1/ptm/m/n/10 SMARTS def-i-ni-tions in $(RD-

Overfull \hbox (9.18636pt too wide) in paragraph at lines 4174--4177
\T1/ptm/m/n/10 BASE)/Data/FragmentDescriptors.csv| 

Underfull \hbox (badness 7273) in paragraph at lines 4183--4186
\T1/ptm/m/n/10 and Con-soni ^^PDe-scrip-tors from

Underfull \hbox (badness 10000) in paragraph at lines 4183--4186
\T1/ptm/m/n/10 Chemoin-for-mat-ics [][]$https : / / doi . org /
[64]

Package longtable Warning: Column widths have changed
(longtable)                in table 1 on input line 4190.

[65]
Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 De-scrip-

Overfull \hbox (19.3687pt too wide) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 tor/Descriptor

Overfull \hbox (3.88354pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (8.88354pt too wide) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 best fit

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 PMI1,

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 PMI2,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 NPR1,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Ra-

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 dius of

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 In-er-tial

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 shape

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Ec-cen-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 As-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Sphe-

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 roc-ity

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Au-to-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 GET-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 
[66]
Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Fin-ger-print

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (2.77637pt too wide) in paragraph at lines 4413--4413
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Topo-log-i-cal

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Mor-

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 2D Phar-ma-

Overfull \hbox (0.97221pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Fea-

Overfull \hbox (8.75237pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Donor| 

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Ac-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

Overfull \hbox (2.08232pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Aro-

Overfull \hbox (5.422pt too wide) in paragraph at lines 4463--4463
\T1/ptm/m/n/10 matic| 

Overfull \hbox (5.9722pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Halo-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Ba-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/pcr/m/n/10 [#7;+,$([N;H2&+0][$([C,a]);!$([C,a](=O))]),$([N;H1&+0]([$([C,a
]);!

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
\T1/pcr/m/n/10 $([C,a](=O))])[$([C,a]);!$([C,a](=O))]),$([N;H0&+0]([C;!$(C(=O))
])([C;!

Overfull \hbox (9.86208pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Acidic| 
[67 <./picture_5.png (PNG copy)>] [68]
Chapter 2.
[69 <./picture_9.png (PNG copy)>] [70 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [71 <./picture_10.png> <./picture_12.png>] [72 <./picture_11.png>]
[73] [74] [75] [76] [77] [78] [79] [80] [81] [82]

LaTeX Warning: Hyper reference `RDKit_Book:ph4-figure' on page 83 undefined on 
input line 5460.

[83 <./picture_10.jpg>] [84] [85]
Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 _Chi-ral-i-ty-Pos-si-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 _Re-ac-tion-De-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 mo-lAtomMap-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 molFileIn-ver-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 mol-Rxn-Com-po-
[86] [87]
Underfull \hbox (badness 10000) in paragraph at lines 6033--6037
[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

Underfull \hbox (badness 6559) in paragraph at lines 6033--6037
\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier
[88]
Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAtomIntPropertyList()\T1/ptm/m/n/10 
, \T1/pcr/m/n/10 rdkit.Chem.

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/pcr/m/n/10 rdmolfiles.CreateAtomDoublePropertyList()\T1/ptm/m/n/10 , or \T1
/pcr/m/n/10 rdkit.Chem.rdmolfiles.
[89]
Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/phv/m/n/10 Mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-
[90] [91 <./enhanced_stereo_and1_and2_base.png> <./enhanced_stereo_and1_and2_ex
pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
ng> <./enhanced_stereo_abs_and_expand.png> <./enhanced_stereo_abs_or_base.png>]

Underfull \hbox (badness 7558) in paragraph at lines 6209--6211
[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 6223--6224
[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the

Underfull \hbox (badness 10000) in paragraph at lines 6266--6268
[]

Underfull \hbox (badness 10000) in paragraph at lines 6377--6379
[]
[92] [93 <./EnhancedStereoSSS_molA.png> <./EnhancedStereoSSS_molB.png> <./Enhan
cedStereoSSS_molC.png> <./EnhancedStereoSSS_molD.png> <./EnhancedStereoSSS_molE
.png> <./EnhancedStereoSSS_molF.png> <./EnhancedStereoSSS_molG.png>] [94]
[95] [96]
Underfull \hbox (badness 10000) in paragraph at lines 6693--6703
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,torsionbv_fp(m) as tor-sionbv,mo
rganbv_fp(m) as
[97]
Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
[]

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 1671940 | Cc1cccc(C)c1N1C(=O)c2ccccc2NC(=O)C1C(=O)NCc1ccco1 1318
078

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 | COCN1C(=O)[C@@H]2C[C@@H](O)CN2C(=O)c2ccccc21 1318783 |

Overfull \hbox (31.51144pt too wide) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 O/N=C1/Nc2ccccc2C(=S)N2CSCC12 1318127 | CC(=O)O[C@H]1C[C@H]2C(=S
)Nc3ccccc3C(=S)N2C1

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 1308578 | O=C1Nc2cc([N+](=O)[O-])ccc2C(=O)N2CCC[C@@H]12 1417168 
|

Underfull \hbox (badness 10000) in paragraph at lines 6845--6849
[]\T1/ptm/m/n/10 793329 | Cc1ccc2c(c1)C(c1ccccc1)N(C(=O)c1ccc(OC(C)C)cc1)CC(=O)
N2 921215

Overfull \hbox (36.73141pt too wide) in paragraph at lines 6845--6849
\T1/ptm/m/n/10 CCOC(=O)[C@H]1[C@H]2COc3ccc(Cl)cc3[C@@H]2N2C(=O)c3cc(C)ccc3NC(=O
)[C@@]12C
[98]
Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
[]

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 1882516 | COc1cccc(CN(C)Cc2nc(C(C)C)no2)c1 2194441 |

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 Cc1nc([C@](C)(O)C#Cc2ccc3c(c2)-c2nc(C(N)=O)sc2[C@@H](F)CO3)no1 1
881742

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 | CCOc1ccc(C(F)(F)F)cc1NC(=O)NCc1noc(C)n1 1949861 | FC(F)(F)c1cc
c(-c2nc(-

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 c3ccc4nc[nH]c4c3)no2)cc1 1949860 | FC(F)(F)c1cccc(-c2nc(-c3ccc4n
c[nH]c4c3)no2)c1

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 2172627 | O=c1[nH]cc(-c2cc(Cl)ccc2Oc2cc(F)c(S(=O)(=O)Nc3ncns3)cc
2F)n2cncc12 ...

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 1848026 | O=C1CCCN1c1cccc(-c2noc([C@H]3CCCCN3C(=O)COc3ccccc3)n2)
c1 1848027

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 | O=C1CN(c2cccc(-c3noc([C@H]4CCCCN4C(=O)COc4ccccc4)n3)c2)C(=O)N1
 1848036 |

Underfull \hbox (badness 10000) in paragraph at lines 6893--6895
[]

Underfull \hbox (badness 7133) in paragraph at lines 6896--6907
[]\T1/ptm/m/n/10 2213985 |

Overfull \hbox (1217.18044pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 CC[C@H](C)[C@@H]1NC(=O)[C@@H]2CCCN2C(=O)[C@@H]2CCCN2C(=O)[C@H]([
C@@H](C)CC)NC(=O)[C@H](CO)NC(=O)[C@H](C)NC(=O)[C@H]([C@H](C)O)NC(=O)[C@@H]2CSSC
[C@H](NC1=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=
N)N)C(=O)N[C@@H](Cc1c[nH]c3ccccc13)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N2

Overfull \hbox (241.35918pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 CN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H]2
CCCN2C(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@@H]1CC(=O)O

Overfull \hbox (212.21968pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2053463 | NC-CCC[C@H](NC(=O)[C@H](Cc1ccc(OP(=O)(O)O)cc1)NC(=O)Cc
1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O

Overfull \hbox (822.66353pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2060743 | CC-C-C-C-C-C-C-C-C-C-C-C-C-C-CNC(=O)CN(CC(=O)NC(C)(C)C
(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C
CCNC(=N)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(N)=O)C(N)=O)C
(=O)c1cccnc1

Overfull \hbox (635.7045pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2060744 | CC-C-C-C-C-C-C-C-C-C-C-C-C-CCN(CCCCCCCCCCCCCCCC)CCCCCC
(=O)NC(C)(C)C(=O)NC(Cc1ccccc1)C(=O)NC(CC(C)C)C(=O)NC(Cc1ccccc1)C(=O)NC(CCCNC(=N
)N)C(=O)N1CCCC1C(=O)NC(CCCNC(=N)N)C(=O)NC(CC(N)=O)C(N)=O

Overfull \hbox (502.09679pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2077784 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CCSC)NC1=O

Overfull \hbox (499.85667pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2077779 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (586.79553pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC1=O 2077782 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23
)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CCSC)
NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 10000) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC1=O 2077780 | CC(C)C[C@@H]1NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (309.87823pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc
2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 7133) in paragraph at lines 6925--6936
[]\T1/ptm/m/n/10 2213985 |

Overfull \hbox (1217.18044pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 CC[C@H](C)[C@@H]1NC(=O)[C@@H]2CCCN2C(=O)[C@@H]2CCCN2C(=O)[C@H]([
C@@H](C)CC)NC(=O)[C@H](CO)NC(=O)[C@H](C)NC(=O)[C@H]([C@H](C)O)NC(=O)[C@@H]2CSSC
[C@H](NC1=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=
N)N)C(=O)N[C@@H](Cc1c[nH]c3ccccc13)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N2

Overfull \hbox (241.35918pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 CN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H]2
CCCN2C(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@@H]1CC(=O)O

Overfull \hbox (212.21968pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2053463 | NC-CCC[C@H](NC(=O)[C@H](Cc1ccc(OP(=O)(O)O)cc1)NC(=O)Cc
1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O

Overfull \hbox (822.66353pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2060743 | CC-C-C-C-C-C-C-C-C-C-C-C-C-C-CNC(=O)CN(CC(=O)NC(C)(C)C
(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C
CCNC(=N)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(N)=O)C(N)=O)C
(=O)c1cccnc1

Overfull \hbox (502.09679pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2077784 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CCSC)NC1=O

Overfull \hbox (499.85667pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2077779 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (586.79553pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2077782 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23
)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CCSC)
NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 10000) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2077780 | CC(C)C[C@@H]1NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (309.87823pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc
2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (722.08417pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2211488 | CC[C@H](C)[C@H](N)C(=O)N[C@H](C(=O)N[C@@H](CC(
C)C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N1CCC[C@H]1C(=O)N[C@H](CCC(=O)N[C@@H](CCC(
=O)N[C@@H](CC(C)C)C(=O)O)Cc1ccccc1)Cc1ccccc1)C(C)C)[C@@H](C)CC 
[99]
Overfull \hbox (95.8203pt too wide) in paragraph at lines 6952--6954
[]

Underfull \hbox (badness 10000) in paragraph at lines 6955--6959
[]\T1/ptm/m/n/10 1609520

Underfull \hbox (badness 10000) in paragraph at lines 6961--6964
[]\T1/ptm/m/n/10 734975 | Cc1cccc(NC(=O)CN(C)S(=O)(=O)c2ccc(Cl)cc2)n1 760426

Underfull \hbox (badness 10000) in paragraph at lines 6961--6964
\T1/ptm/m/n/10 | Cc1cccc(NC(=O)CCCn2cc([N+](=O)[O-])cn2)n1 782786 |

Underfull \hbox (badness 10000) in paragraph at lines 6966--6969
[]\T1/ptm/m/n/10 1478990 | Cc1cccc(NC(=O)Cn2c(=O)sc3cc(C(=O)c4ccccc4)ccc32)n1 1
478787

Underfull \hbox (badness 10000) in paragraph at lines 6966--6969
\T1/ptm/m/n/10 | Cc1cccc(NC(=O)Cn2c(=O)sc3cc(C(=O)c4ccccc4F)ccc32)n1 1955608 |

Overfull \hbox (27.26088pt too wide) in paragraph at lines 6998--7000
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,m from rdk.mols where m@>mol_adj
ust_query_properties(`\T1/ptm/m/it/10 c1cccc(NC(=O)\T1/ptm/m/n/10 )n1',

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
[]

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2146308 | CCn1ncc2cc3nc(c21)NCCOC[C@H](c1ccccc1)NC(=O)N3 2137309
 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H](O)[C@H](c1ccccc1)NC(=O)N3 2102593 |


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@@H](C)O)[C@@H](c1ccccc1)NC(=O)N3


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2171613 | CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@H](C)O)[C@@H](c1ccccc1
)NC(=O)N3

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2111904 | CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1cccc(Cl)c1)NC(=O
)N3

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2173410 | CCn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2189450


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 | Cn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2195752 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1ccccc1)NC(=O)N3 1609520 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 Cc1cccc(NC(=O)c2cc(Br)ccc2C(=O)O)n1 1141456 | CCN(CC)CCCn1cc(NC(
=O)Nc2cccc(-
[100]
Overfull \hbox (27.26088pt too wide) in paragraph at lines 7028--7030
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,m from rdk.mols where m@>mol_adj
ust_query_properties(`\T1/ptm/m/it/10 c1cccc(NC(=O)\T1/ptm/m/n/10 )n1',

Underfull \hbox (badness 10000) in paragraph at lines 7028--7030
\T1/ptm/m/n/10 chembl_25(# `{^^Pad-just-De-gree^^Q:true,^^QadjustDegreeFlags^^Q
:^^QIGNORERINGS|IGNOREDUMMIES^^Q}')

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
[]

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2146308 | CCn1ncc2cc3nc(c21)NCCOC[C@H](c1ccccc1)NC(=O)N3 2137309
 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H](O)[C@H](c1ccccc1)NC(=O)N3 2102593 |


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@@H](C)O)[C@@H](c1ccccc1)NC(=O)N3


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2171613 | CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@H](C)O)[C@@H](c1ccccc1
)NC(=O)N3

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2111904 | CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1cccc(Cl)c1)NC(=O
)N3

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2173410 | CCn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2189450


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 | Cn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2195752 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1ccccc1)NC(=O)N3 1609520 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 Cc1cccc(NC(=O)c2cc(Br)ccc2C(=O)O)n1 1141456 | CCN(CC)CCCn1cc(NC(
=O)Nc2cccc(-
[101]
Overfull \hbox (167.39018pt too wide) in paragraph at lines 7116--7118
[]

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
[]\T1/ptm/m/n/10 $$ se-lect mol-regno,m,tanimoto_sml(morganbv_fp(mol_from_smile
s($1::cstring)),mfp2)

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
\T1/ptm/m/n/10 as sim-i-lar-ity from rdk.fps join rdk.mols us-ing (mol-regno) w
here

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
\T1/ptm/m/n/10 mor-ganbv_fp(mol_from_smiles($1::cstring))%mfp2 or-der by mor-

Underfull \hbox (badness 10000) in paragraph at lines 7157--7161
[]\T1/ptm/m/n/10 751668 | COc1ccc2nc(NC(=O)[C@@H]3CCCN3C(=O)c3cccs3)sc2c1 |

Underfull \hbox (badness 10000) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 0.619718309859155 740754 | Cc1ccc(NC(=O)C2CCCN2C(=O)c2cccs2)cc1C
 |

Overfull \hbox (26.79242pt too wide) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 0.606060606060606 732905 | O=C(Nc1ccc(S(=O)(=O)N2CCCC2)cc1)C1CCC
N1C(=O)c1cccs1

Overfull \hbox (12.17265pt too wide) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 | 0.602941176470588 810850 | Cc1cc(C)n(-c2ccc(NC(=O)C3CCCCN3C(=O
)c3cccs3)cc2)n1

Overfull \hbox (14.07268pt too wide) in paragraph at lines 7163--7168
[]

Underfull \hbox (badness 6725) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 779258 | CC1CCN(S(=O)(=O)c2ccc(NC(=O)[C@@H]3CCCN3C(=O)c3cccs3)cc
2)CC1 |

Overfull \hbox (22.98222pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 0.569444444444444 472441 | Cc1ccc2nc(-c3ccc(NC(=O)C4CCN(S(=O)(=O
)C(C)C)CC4)cc3)sc2c1

Overfull \hbox (57.63208pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 | 0.569444444444444 745651 | Cc1ccc(NC(=O)[C@@H]2CCCN2C(=O)c2ccc
s2)cc1S(=O)(=O)N1CCCCC1

Overfull \hbox (52.96193pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 | 0.567567567567568 472510 | Cc1ccc2nc(-c3ccc(NC(=O)C4CCN(S(=O)(
=O)c5cccc(Cl)c5)CC4)cc3)sc2c1

Underfull \hbox (badness 10000) in paragraph at lines 7184--7187
[]\T1/ptm/m/n/10 2138088 |

Underfull \hbox (badness 10000) in paragraph at lines 7184--7187
\T1/ptm/m/n/10 CN(CC(=O)O)c1nc2ccc([N+](=O)[O-])cc2s1 | 0.673913043478261 10402
55 |
[102]
Underfull \hbox (badness 10000) in paragraph at lines 7192--7194
[]\T1/ptm/m/n/10 441378 |

Overfull \hbox (43.9108pt too wide) in paragraph at lines 7285--7287
[]
[103]
Underfull \hbox (badness 10000) in paragraph at lines 7304--7305
[]\T1/ptm/m/n/10 [#6]-[#6](=[#8])-[#7]-[#6](-[#6](=[#8])-[#7]1-[#6]-[#6]-[#6]-[
#6]-1-[#6](=[#8])-[#7]-[#6](-

Overfull \hbox (139.57957pt too wide) in paragraph at lines 7315--7317
[]

Underfull \hbox (badness 10000) in paragraph at lines 7341--7342
[]\T1/ptm/m/n/10 [#6]-[#6]-[#8]-[#6](-[#6](=[#8])-[#7]-[#6](-[#6])-[#6](-,:[#6]
)-,:[#6])-[#6](-[#8])-[#6](-[#8])-

Underfull \hbox (badness 10000) in paragraph at lines 7357--7358
[]\T1/ptm/m/n/10 [#6]-,:[#6,#7]-[#8,#6]-[#6,#7](-[#6,#8]-[#7,#6]-,:[#6,#7]-,:[#
6,#7]-,:[#7,#6]-,:[#6])-[#6,#7]-

Overfull \hbox (77.20956pt too wide) in paragraph at lines 7368--7371
[]\T1/ptm/m/n/10 chembl_25=# se-lect fmcs_smiles(str,'{^^PAtomCompare^^Q:^^QAny
^^Q,^^QCompleteRingsOnly^^Q:true,^^QThreshold^^Q:0.8,^^QTimeout^^Q:60}')

Underfull \hbox (badness 10000) in paragraph at lines 7378--7379
[]\T1/ptm/m/n/10 [#8]=[#6](-[#7]-[#6]1:[#6]:[#6]:[#6](:[#6]:[#6]:1)-[#6](=[#8])
-[#7]1-[#6]-[#6]-[#6]-[#6,#7]-
[104] [105] [106] [107] [108] [109]
Underfull \hbox (badness 7851) in paragraph at lines 7828--7830
[]\T1/ptm/m/n/10 ### Re-nam-ing a cmake op-tion The cmake op-tion \T1/ptm/m/it/
10 RDK_OPTIMIZE_NATIVE \T1/ptm/m/n/10 has been re-named to
[110] [111] [112]
Chapter 3.
[113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124]
[125] [126] [127] [128] [129] [130]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Underfull \hbox (badness 10000) in paragraph at lines 9203--9205
[]\T1/ptm/m/n/10 implicitly-deleted copy con-struc-tor of `std::__1::unique_ptr
<RDKit::RWMol,

Overfull \hbox (92.21841pt too wide) in paragraph at lines 9213--9213
[]

Underfull \hbox (badness 10000) in paragraph at lines 9213--9213


Underfull \hbox (badness 10000) in paragraph at lines 9215--9217
[]\T1/ptm/m/n/10 copy con-struc-tor is im-plic-itly deleted be-cause `unique_pt
r<RDKit::RWMol,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9226.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9226.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9247--9248
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/GraphMol.h> #include 
<GraphMol/FileParsers/
[131]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9286--9290
[]\T1/ptm/m/n/10 If the molecule can't be san-i-tized af-ter SMILES pars-ing, a
n \T1/ptm/m/it/10 RD-Kit::MolSanitizeException \T1/ptm/m/n/10 (de-rived

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.

[132]
Chapter 4.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.

[133] [134]
Chapter 5.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.

[135] [136]
Chapter 6.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9349--9356
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 mol-295 has 20 atoms. mo
l-54 has 24 atoms. mol-15 has 24 atoms. mol-732

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Underfull \hbox (badness 5652) in paragraph at lines 9359--9362
[]\TS1/cmr/b/n/10 ``[][]`[]\T1/ptm/m/n/10 c++ RD-Kit::SDMolSupplier mol_supplie
r( ^^Pdata/5ht3ligs.sdf^^Q , take-Own-er-ship ); for( int i = int(
[137] [138]
Chapter 7.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9380--9387
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 mol-732 has 26 atoms. mo
l-15 has 24 atoms. mol-54 has 24 atoms. mol-295

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Underfull \hbox (badness 10000) in paragraph at lines 9395--9398
[]\T1/ptm/m/n/10 std::unique_ptr<RDKit::ROMol> mol(
[139] [140]
Chapter 8.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Underfull \hbox (badness 10000) in paragraph at lines 9420--9432
\T1/ptm/m/n/10 ins; ins.push( boost::iostreams::gzip_decompressor() ); std::str
ing comp_sdf_file = file_root +
[141] [142]
Chapter 9.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Overfull \hbox (33.4937pt too wide) in paragraph at lines 9473--9492
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/SmilesParse/SmilesWri
te.h> . . std::shared_ptr<RDKit::ROMol>

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 mol( RDKit::MolFromMolFile( "data/chiral.mol" ) ); std::cout <<

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 RDKit::MolToSmiles( *mol ) << std::endl; \TS1/cmtt/m/n/10 ` \T1/
ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 C[C@H](O)c1ccccc1 \TS1/cmtt/
m/n/10 ` \T1/ptm/m/n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/ptm/m/n/10 [(ex-am-ple3)](./C++Examples/example3.cpp) \TS1/cmtt/m/n/10 `\T1
/pcr/m/n/10 c++ bool isomeric = false; std::cout <<

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 RDKit::MolToSmiles( *mol , isomeric ) << std::endl; \TS1/cmtt/m/
n/10 ` \T1/ptm/m/n/10 pro-duces \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 CC(O)c1ccccc1


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/MolOps.h> . . std::sh
ared_ptr<RDKit::RWMol>

Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
\T1/pcr/m/n/10 mol4( new RDKit::RWMol( *mol ) ); RDKit::MolOps::Kekulize( *mol4
 );

Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
\T1/pcr/m/n/10 std::cout << RDKit::MolToSmiles( *mol4, true, true ) << std::end
l; \TS1/cmtt/m/n/10 ` \T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 `

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Underfull \hbox (badness 10000) in paragraph at lines 9532--9535
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol1( RDKi
t::SmilesToMol( "C1=CC=CN=C1" )
[143]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Underfull \hbox (badness 10000) in paragraph at lines 9568--9570
[]\T1/ptm/m/n/10 To in-clude names in the mol blocks, set the molecule's ^^P_Na
me^^Q prop-erty [(ex-am-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Underfull \hbox (badness 10000) in paragraph at lines 9575--9579
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ mol1 = RDKit::SmilesToMol( "C1CCC1" ); m
ol1->setProp( "_Name" ,

Underfull \hbox (badness 10000) in paragraph at lines 9575--9579
\T1/pcr/m/n/10 "cyclobutane" ); std::cout << RDKit::MolToMolBlock( *mol1 ) << s
td::endl; \TS1/cmtt/m/n/10 `

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Overfull \hbox (9.4937pt too wide) in paragraph at lines 9630--9633
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/Depictor/RDDepictor.h
> . . std::shared_ptr<RDKit::ROMol>

Underfull \hbox (badness 10000) in paragraph at lines 9630--9633
\T1/pcr/m/n/10 mol1( RDKit::SmilesToMol( "C1CCC1" ) ); RDDepict::compute2DCoord
s( *mol1 );

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.

[144]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/DistGeomHelpers/Embed
der.h> #include <GraphMol/

Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 ForceFieldHelpers/MMFF/MMFF.h> . . std::shared_ptr<RDKit::ROMol>


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 mol2( RDKit::SmilesToMol( "C1CCC1" ) ); mol2->setProp( "_Name" ,


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 "cyclobutane3D" ); RDKit::DGeomHelpers::EmbedMolecule( *mol2 );

Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 RDKit::MMFF::MMFFOptimizeMolecule( *mol2 , 1000 , "MMFF94s" ); s
td::cout <<

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Underfull \hbox (badness 10000) in paragraph at lines 9710--9713
[]\TS1/cmr/b/n/10 ``[][]`[]\T1/ptm/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol
3( RD-Kit::MolOps::addHs( []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol2 ) ); RD-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9718--9730
\T1/ptm/m/n/10 am-ple4)](./C++Examples/example4.cpp): \TS1/cmtt/m/n/10 `\T1/pcr
/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol3sp(

Underfull \hbox (badness 10000) in paragraph at lines 9718--9730
\T1/pcr/m/n/10 RDKit::MolOps::addHs( *mol2 ) ); mol3sp->setProp( "_Name" , "cyc
lobutaneSP"

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9737--9738
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol5( RDKi
t::MolOps::removeHs( *mol3 );

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Underfull \hbox (badness 10000) in paragraph at lines 9768--9773
\T1/ptm/m/n/10 mol_supplier( sdf_file , take-Own-er-ship ); std::vector<std::sh
ared_ptr<RDKit::ROMol>> mols; while(
[145] [146]
Chapter 10.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.

[147] [148]
Chapter 11.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.

[149] [150]
Chapter 12.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Underfull \hbox (badness 10000) in paragraph at lines 9910--9912
[]\T1/ptm/m/n/10 const RD-Kit::Atom []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 atom = m
ol2->getAtomWithIdx( 2 ); for(const auto &nbri:

Underfull \hbox (badness 10000) in paragraph at lines 9914--9918
[]\T1/ptm/m/n/10 const RD-Kit::Bond []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 bond = (
[]\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol)[nbri]; un-signed int nbr_idx = bond-

Underfull \hbox (badness 10000) in paragraph at lines 9914--9918
\T1/ptm/m/n/10 >getOtherAtomIdx(atom->getIdx()); int nbr_atnum = bond->getOther
Atom(atom)-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9930.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Underfull \hbox (badness 6477) in paragraph at lines 9952--9954
[]\T1/ptm/m/n/10 const RD-Kit::Atom []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 atom = m
ol->getAtomWithIdx( i ); std::cout << mol->getRingInfo()-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.

[151]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.

[152]
Chapter 13.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol1( RDKit:
:SmilesToMol( "CCO" ) );

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 std::cout << "Number of atoms : " << mol1->getNumAtoms() << std:
:endl;

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 std::shared_ptr<RDKit::ROMol> mol2( RDKit::MolOps::addHs( *mol1 
) ); std::cout

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 mol3( new RDKit::RWMol( *mol2 ) ); RDKit::MolOps::removeHs( *mol
3 ); std::cout

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 << "Number of atoms : " << mol3->getNumAtoms() << std::endl; \TS
1/cmtt/m/n/10 ` \T1/ptm/m/n/10 which re-turns the

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.

[153]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
[]\T1/ptm/m/n/10 Bonds can be re-stored to the aro-matic bond type us-ing the \
T1/ptm/m/it/10 RD-Kit::MolOps::sanitizeMol \T1/ptm/m/n/10 func-

Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
\T1/ptm/m/n/10 tion: \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ RDKit::MolOps::saniti
zeMol( *mol ); std::cout << "Order : " <<

Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
\T1/pcr/m/n/10 mol->getBondWithIdx( 0 )->getBondType() << std::endl; std::cout 
<< "Aromatic

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Underfull \hbox (badness 6220) in paragraph at lines 10149--10168
\T1/ptm/m/n/10 They are part of the RD-De-pict names-pace, is ac-cessed via the
 \T1/ptm/m/it/10 RD-De-pict::Compute2DCoords \T1/ptm/m/n/10 func-

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/ptm/m/n/10 tion [(ex-am-ple10.cpp)](./C++Examples/example10.cpp): \TS1/cmtt
/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/Depictor/

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/pcr/m/n/10 RDDepictor.h> . . std::shared_ptr<RDKit::RWMol>xs mol( new RDKit
::RWMol(

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/pcr/m/n/10 *RDKit::SmilesToMol( "c1nccc2n1ccc2" ) ) ); RDDepict::compute2DC
oords( *mol

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Underfull \hbox (badness 10000) in paragraph at lines 10178--10182
[]\T1/ptm/m/n/10 #endif []\TS1/cmr/b/n/10 ``[]\TS1/cmr/m/n/10 ` \T1/ptm/m/n/10 
The [CMake-Lists.txt](./C++Examples/CMakeLists.txt) with the ex-am-ples de-fine
s

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.

[154]
Chapter 14.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Underfull \hbox (badness 10000) in paragraph at lines 10301--10316
[]\T1/ptm/m/n/10 // new Riniker and Lan-drum CSD-based method // us-ing the pa-
ram-e-ters class RD-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
[]\T1/ptm/m/n/10 The RD-Kit also has an im-ple-men-ta-tion of the MMFF94 force 
field avail-able

Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
\T1/ptm/m/n/10 [[4]](#mmff1), [[5]](#mmff2), [[6]](#mmff3), [[7]](#mmff4), [[8]
](#mmffs). [(ex-am-

Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
\T1/pcr/m/n/10 MMFF.h> . . RDKit::MMFF::MMFFOptimizeMolecule( *mol2 , 1000 , "M
MFF94s" ); \TS1/cmtt/m/n/10 `
[155]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Underfull \hbox (badness 6859) in paragraph at lines 10375--10379
[]\T1/ptm/m/n/10 static_cast<const std::vector<unsigned int> []\T1/ptm/b/n/10 *
[]\T1/ptm/m/n/10 >( 0 ) , &m2cids , static_cast<const RD-Nu-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 h> . . RDKit::ROMol *mol1 = RDKit::SmilesToMol( "c1ccncc1" ); st
d::string

Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 pickle; RDKit::MolPickler::pickleMol( *mol1 , pickle ); RDKit::R
OMol

Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 mol2; RDKit::MolPickler::molFromPickle( pickle , mol2 ); std::co
ut <<
[156]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 6842) in paragraph at lines 10483--10493
[]\T1/ptm/m/n/10 } pickle_istream.close(); std::cout << ^^PRead ^^Q << read_cnt
 << ^^Q molecules.^^Q << std::endl; \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 By

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 default, the pickling process does not preserve any properties a
ttached

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 to the molecule, which includes the molecule name (property "_Na
me"). This

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 can be forced: \TS1/cmtt/m/n/10 ```\T1/pcr/m/n/10 c++ RDKit::Mol
Pickler::pickleMol( *mol , pickle_ostream,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 <GraphMol/MolDraw2D/MolDraw2DSVG.h> . . RDKit::SDMolSupplier mol
_supplier(

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 "data/cdk2.sdf" , true ); RDKit::ROMol *mol1 = mol_supplier.next
();

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 RDDepict::compute2DCoords( *mol1 ); std::ofstream outs("cdk_mol1
.svg");

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 RDKit::MolDraw2DSVG svg_drawer(300, 300, outs); svg_drawer.drawM
olecule(

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 *mol1 ); svg_drawer.finishDrawing(); outs.close(); \TS1/cmtt/m/n
/10 ` \T1/ptm/m/n/10 The pro-ce-dure for a PNG is

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/ptm/m/n/10 slightly dif-fer-ent: [(ex-am-ple13.cpp)](./C++Examples/example1
3.cpp): \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 MolDraw2D/MolDraw2DSVG.h> . . RDKit::MolDraw2DCairo cairo_drawer
(300, 300);

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 cairo_drawer.drawMolecule(*mol1); cairo_drawer.finishDrawing(); 
cairo_drawer.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Underfull \hbox (badness 10000) in paragraph at lines 10544--10552
[]\T1/ptm/m/n/10 } Mol-Draw2DSVG drawer(750, 400, 250, 200); drawer.drawMolecul
es(mols);
[157]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 7777) in paragraph at lines 10558--10582
\T1/ptm/m/n/10 have matched a sub-struc-ture query [(ex-am-ple17.cpp)](./C++Exa
mples/example17.cpp): \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ drawer.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 std::map<int, DrawColour> atom_cols; atom_cols.insert(std::make_
pair(13,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 DrawColour(1.0, 0.0, 0.0))); atom_cols.insert(std::make_pair(14,
 DrawColour(0.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 0, 1.0, 0.0))); atom_cols.insert(std::make_pair(15, DrawColour(0
.0, 0.0,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 1.0))); atom_cols.insert(std::make_pair(16, DrawColour(1.0, 0.55
, 0.0)));

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 std::map<int, DrawColour> bond_cols; bond_cols.insert(std::make_
pair(13,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 DrawColour(0.8, 0.8, 0.0))); bond_cols.insert(std::make_pair(14,
 DrawColour(0.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 0, 1.0, 1.0))); bond_cols.insert(std::make_pair(15, DrawColour(1
.0, 0.0,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 1.0))); drawer.drawMolecule(*mol, &hit1_atoms, &hit1_bonds, &ato
m_cols,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Underfull \hbox (badness 10000) in paragraph at lines 10600--10613
\T1/ptm/m/n/10 >setProp(common_properties::bondNote, ^^Pbar^^Q); drawer.drawOpt
ions().addAtomIndices

Underfull \hbox (badness 10000) in paragraph at lines 10600--10613
\T1/ptm/m/n/10 = true; drawer.drawOptions().addStereoAnnotation = true; drawer.
drawMolecule([]\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 m1);

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Underfull \hbox (badness 10000) in paragraph at lines 10621--10632
[]\T1/ptm/m/n/10 Substructure match-ing can be done us-ing query molecules buil
t from SMARTS. [(ex-am-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Underfull \hbox (badness 10000) in paragraph at lines 10644--10658
\T1/pcr/m/n/10 match, and replaces the contents of \TS1/cmtt/m/n/10 `\T1/pcr/m/
n/10 res\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 with a mapping of the atom indices

Underfull \hbox (badness 10000) in paragraph at lines 10644--10658
\T1/pcr/m/n/10 in the pattern and a set of atoms that match in the molecule. In
 the above

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.

[158] [159] [160]
Chapter 15.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Underfull \hbox (badness 6001) in paragraph at lines 10723--10730
[]\T1/ptm/m/n/10 Substructure match-ing can also be done us-ing molecules built
 from SMILES in-stead of SMARTS:
[161] [162]
Chapter 16.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Underfull \hbox (badness 10000) in paragraph at lines 10756--10763
\T1/ptm/m/n/10 But don't for-get that the se-man-tics of the two lan-guages are
 not ex-actly equiv-a-lent: [(ex-am-

Underfull \hbox (badness 10000) in paragraph at lines 10756--10763
\T1/ptm/m/n/10 ple14.cpp)](./C++Examples/example14.cpp): []\TS1/cmr/b/n/10 ``[]
[]`[]\T1/ptm/m/n/10 c++ RD-Kit::ROMol []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol4 =
 RD-Kit::SmilesToMol(
[163] [164]
Chapter 17.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.

[165] [166]
Chapter 18.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.

[167] [168]
Chapter 19.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Underfull \hbox (badness 10000) in paragraph at lines 10906--10920
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 SMARTS 1 chiral match No
t SMARTS 2 chiral match SMARTS 3 chiral match \TS1/cmtt/m/n/10 `
[169] [170]
Chapter 20.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.

[171] [172]
Chapter 21.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[173] [174]
Chapter 22.
[175] [176]
Chapter 23.
No file RDKit.ind.

Package longtable Warning: Table widths have changed. Rerun LaTeX.

[177] (./RDKit.aux)
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcti1000
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcti1000
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcti1000.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcti.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txitlod.mf
 Ok [48] [49] [53] [54] [56] [57] [50] [51] [52] [55])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txisuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txifract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tcti1000.tfm.
Output written on tcti1000.600gf (128 characters, 23764 bytes).
Transcript written on tcti1000.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tcti1000.600pk: successfully generated.


Package rerunfilecheck Warning: File `RDKit.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tcti1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc}
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrm1000
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrm1000
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm1000.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
(some charht values had to be adjusted by as much as 0.06943pt)
Font metrics written on tcrm1000.tfm.
Output written on tcrm1000.600gf (128 characters, 23548 bytes).
Transcript written on tcrm1000.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tcrm1000.600pk: successfully generated.
 </tmp/texfonts/pk/ljfour/jknappen/ec/tcrm1000.600pk>
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt1000
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt1000.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tctt1000.tfm.
Output written on tctt1000.600gf (128 characters, 19540 bytes).
Transcript written on tctt1000.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated.
 </tmp/texfonts/pk/l
jfour/jknappen/ec/tctt1000.600pk>
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrb1000
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrb1000
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrb1000.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrb.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tcrb1000.tfm.
Output written on tcrb1000.600gf (128 characters, 22660 bytes).
Transcript written on tcrb1000.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tcrb1000.600pk: successfully generated.
 </tmp/texfonts/pk/ljfour/jknappen/ec/tcrb1000
.600pk>
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt0900
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt0900
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt0900.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tctt0900.tfm.
Output written on tctt0900.600gf (128 characters, 17564 bytes).
Transcript written on tctt0900.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk: successfully generated.
 </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw
/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr
o8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></usr/share/tex
live/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1
/urw/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utm
r8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on RDKit.pdf (181 pages, 1446182 bytes).
Transcript written on RDKit.log.
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Missing input file: 'RDKit.ind' from line
  'No file RDKit.ind.'
Latexmk: References changed.
Latexmk: References changed.
Latexmk: Log file says output to 'RDKit.pdf'
Rule 'makeindex RDKit.idx': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'RDKit.idx'
------------
Run number 1 of rule 'makeindex RDKit.idx'
------------
------------
Running 'makeindex -s python.ist  -o "RDKit.ind" "RDKit.idx"'
------------
Latexmk: Examining 'RDKit.log'
=== TeX engine is 'pdfTeX'
Latexmk: applying rule 'makeindex RDKit.idx'...
This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support).
Scanning style file ./python.ist.......done (7 attributes redefined, 0 ignored).
Scanning input file RDKit.idx...done (0 entries accepted, 0 rejected).
Nothing written in RDKit.ind.
Transcript written in RDKit.ilg.
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'RDKit.aux'
      'RDKit.ind'
      'RDKit.out'
------------
Run number 2 of rule 'pdflatex'
------------
------------
Running 'pdflatex   -recorder  "RDKit.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./RDKit.tex
LaTeX2e <2020-02-02> patch level 5
L3 programming layer <2020-09-24> (./sphinxmanual.cls
Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual)
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty<<t1.cmap>>)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def
(/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def))
(/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)
(./sphinxmulticell.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
(./footnotehyper-sphinx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty)
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
(./sphinxhighlight.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(./sphinxmessages.sty)
Writing index file RDKit.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)
(./RDKit.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(./RDKit.out) (./RDKit.out)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<<ot1.cmap>><<oml.cmap
>><<oms.cmap>><<omx.cmap>>
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] (./RDKit.toc [1] [2] [3]) [4]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Underfull \hbox (badness 10000) in paragraph at lines 177--178
[]\T1/ptm/m/n/10 [stk]([][]$https : / / github . com / lukasturcani / stk$[][])
 ([docs]([][]$https : / / lukasturcani . github . io / stk / docs / build / htm
l/$[][]), [pa-
[1] [2] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.

(/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 290--291
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 bash Miniconda3-latest-MacOSX-x86_64.sh con
da install numpy matplotlib conda

Underfull \hbox (badness 10000) in paragraph at lines 290--291
\T1/pcr/m/n/10 install cmake cairo pillow eigen pkg-config conda install boost-
cpp boost

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Underfull \hbox (badness 10000) in paragraph at lines 307--308
[]\T1/ptm/m/n/10 -DRDK_BUILD_AVALON_SUPPORT=ON -DRDK_BUILD_CAIRO_SUPPORT=ON -

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 316--317
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 RDBASE=$RDBASE DYLD_FALLBACK_LIBRARY_PATH="
$RDBASE/lib:$PYROOT/lib"
[3]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 331--332
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 bash Anaconda3-5.2.0-x86_64.sh conda instal
l -y cmake cairo pillow eigen

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Underfull \hbox (badness 10000) in paragraph at lines 348--349
[]\T1/ptm/m/n/10 -DRDK_INSTALL_INTREE=ON -DRDK_INSTALL_STATIC_LIBS=OFF -

Underfull \hbox (badness 5504) in paragraph at lines 348--349
\T1/ptm/m/n/10 DRDK_BUILD_CPP_TESTS=ON -DPYTHON_NUMPY_INCLUDE_PATH=^^Q$(python 
-c `im-port

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 369--370
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [conda folder]/envs/my-rdkit-env/bin/initdb
 -D /folder/where/data/should/be/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 375--376
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [conda folder]/envs/my-rdkit-env/bin/postgr
es -D /folder/where/data/should/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 384--385
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [program:postgresql] command=[conda folder]
/envs/my-rdkit-env/bin/postgres

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[4]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[5]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 488--489
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 shellsession $ wget https://github.com/rdkit
/rdkit/archive/Release_XXXX_XX_X.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 558--559
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 cmake -D PYTHON_LIBRARY=/usr/lib/python3.6/
config/libpython3.6.a -D

Underfull \hbox (badness 10000) in paragraph at lines 558--559
\T1/pcr/m/n/10 PYTHON_INCLUDE_DIR=/usr/include/python3.6/ -D PYTHON_EXECUTABLE=
/usr/bin/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[6]
Underfull \hbox (badness 10000) in paragraph at lines 576--577
[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment \T1/ptm/m/it/10 -

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 619--620
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 $ CLASSPATH=$CLASSPATH:$RDBASE/Code/JavaWra
ppers/gmwrapper/org.RDKit.jar

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 jython -Djava.library.path=$RDBASE/Code/JavaWrappers/gmwrapper J
ython 2.2.1 on

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 java1.6.0_20 Type "copyright", "credits" or "license" for more i
nformation.

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 >>> from org.RDKit import * >>> from java import lang >>> lang.S
ystem.

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 loadLibrary(\TS1/pcr/m/n/10 '\T1/pcr/m/n/10 GraphMolWrap\TS1/pcr
/m/n/10 '\T1/pcr/m/n/10 ) >>> m = RWMol.MolFromSmiles(\TS1/pcr/m/n/10 '\T1/pcr/
m/n/10 c1ccccc1\TS1/pcr/m/n/10 '\T1/pcr/m/n/10 ) >>> m.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 640--641
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 Linking CXX shared library libSLNParse.so /
usr/bin/ld: .../

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 libboost_regex.a(cpp_regex_traits.o): relocation R_X86_64_32S ag
ainst

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 std::basic_string<char, std::char_traits<char>
, std::allocator<char>

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 >::_Rep::_S_empty_rep_storage\TS1/pcr/m/n/10 ' \T1/pcr/m/n/10 ca
n not be used when making a shared object;

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 recompile with -fPIC .../libboost_regex.a: could not read symbol
s: Bad value

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 collect2: ld returned 1 exit status make[2]: *** [Code/GraphMol/
SLNParse/

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 libSLNParse.so] Error 1 make[1]: *** [Code/GraphMol/SLNParse/CMa
keFiles/
[7]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Overfull \hbox (34.06519pt too wide) in paragraph at lines 654--657
[]\TS1/cmr/b/n/10 ``[]\TS1/cmr/m/n/10 ` \T1/ptm/m/n/10 .../Code/GraphMol/Wrap/E
ditableMol.cpp:114: in-stan-ti-ated from here .../boost/type_traits/detail/cv_t
raits_impl.hpp:37:

Underfull \hbox (badness 10000) in paragraph at lines 659--660
[]\T1/ptm/m/n/10 Please sub-mit a full bug re-port, with pre-pro-cessed source 
if ap-pro-pri-ate. See

Underfull \hbox (badness 10000) in paragraph at lines 659--660
\T1/ptm/m/n/10 <URL:<[][]$http : / / bugzilla . redhat . com / bugzilla$[][]>> 
for in-struc-tions. Pre-pro-cessed source

Underfull \hbox (badness 6792) in paragraph at lines 659--660
\T1/ptm/m/n/10 stored into /tmp/ccgSaXge.out file, please at-tach this to your 
bu-gre-port. make[2]: \T1/ptm/b/n/10 *

Underfull \hbox (badness 10000) in paragraph at lines 659--660
\T1/ptm/b/n/10 [Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o] Er-
ror 1 make[1]:\T1/ptm/m/n/10 *

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 706--707
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 export MACOSX_DEPLOYMENT_TARGET=10.6 export
 LDFLAGS="-Wall -undefined

Underfull \hbox (badness 10000) in paragraph at lines 706--707
\T1/pcr/m/n/10 dynamic_lookup -bundle -arch x86_64" export CFLAGS="-arch x86_64
" ln -s /usr/

Underfull \hbox (badness 10000) in paragraph at lines 706--707
\T1/pcr/m/n/10 bin/gcc /usr/bin/gcc-4.2 ln -s /usr/bin/g++ /usr/bin/g++-4.2 pyt
hon setup.py

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 712--713
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 PYTHON_NUMPY_INCLUDE_PATH /Library/Python/2
.6/site-packages/numpy/core/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[8]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 759.

[9]
Underfull \hbox (badness 10000) in paragraph at lines 826--827
[]\T1/ptm/m/it/10 cmake -DRDK_BUILD_PYTHON_WRAPPERS=ON -DBOOST_ROOT=C:/boost -

Underfull \hbox (badness 10000) in paragraph at lines 826--827
\T1/ptm/m/it/10 DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_BUILD_AVALON_SUPPORT=ON -

Underfull \hbox (badness 10000) in paragraph at lines 826--827
\T1/ptm/m/it/10 DRDK_BUILD_PGSQL=ON -DPostgreSQL_ROOT=^^QC:Program File-sPost-g
reSQL9.5^^Q -G^^QVisual
[10]
Chapter 1.
[11]
Underfull \hbox (badness 10000) in paragraph at lines 936--937
[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
[12] [13] [14] [15] [16] [17] [18] [19]
Underfull \hbox (badness 10000) in paragraph at lines 1463--1465
[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

Underfull \hbox (badness 7649) in paragraph at lines 1463--1465
\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.

Underfull \hbox (badness 10000) in paragraph at lines 1483--1488
[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
[20 <./picture_1.png (PNG copy)> <./picture_0.png (PNG copy)> <./picture_3.png 
(PNG copy)> <./picture_2.png> <./picture_4.png>] [21] [22] [23 <./cdk2_mol1.png
> <./cdk2_mol2.png>] [24 <./cdk2_molgrid.png (PNG copy)>]
Underfull \vbox (badness 2707) detected at line 1787
[25 <./cdk2_molgrid_aligned.png (PNG copy)>] [26 <./atom_highlights_1.png>]
[27 <./atom_highlights_2.png> <./atom_highlights_3.png>]
Overfull \vbox (1.09758pt too high) detected at line 1883
[28 <./atom_annotation_1.png>] [29] [30] [31] [32 <./substruct_search_parameter
s1.png>] [33] [34] [35] [36] [37] [38] [39] [40] [41 <./mfp2_bit872.png> <./rdk
_bit1553.png>] [42 <./rdk_bit1553_2.png>] [43] [44 <./similarity_map_fp1.png>]
[45 <./similarity_map_fp2.png>] [46 <./similarity_map_fp3.png>] [47] [48 <./sim
ilarity_map_charges.png>] [49 <./similarity_map_crippen.png>] [50] [51]
[52] [53] [54] [55] [56] [57] [58]
Underfull \hbox (badness 6792) in paragraph at lines 3599--3602
[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
[59] [60] [61] [62 <./picture_6.png>] [63]
Underfull \hbox (badness 10000) in paragraph at lines 3979--3983
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Underfull \hbox (badness 10000) in paragraph at lines 3989--3993
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Overfull \hbox (26.64615pt too wide) in paragraph at lines 4057--4058
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}Rings| 

Overfull \hbox (91.89552pt too wide) in paragraph at lines 4062--4063
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}{Hetero,Carbo}cycles| 

Underfull \hbox (badness 10000) in paragraph at lines 4091--4094
[]|\T1/ptm/m/n/10 Number of bridge-head atoms

Underfull \hbox (badness 10000) in paragraph at lines 4119--4122
\T1/ptm/m/n/10 tions [][]$http : / / www . chemcomp . com /

Underfull \hbox (badness 10000) in paragraph at lines 4128--4132
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4138--4142
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4174--4177
[]|\T1/ptm/m/n/10 implemented us-ing a set of

Underfull \hbox (badness 10000) in paragraph at lines 4174--4177
\T1/ptm/m/n/10 SMARTS def-i-ni-tions in $(RD-

Overfull \hbox (9.18636pt too wide) in paragraph at lines 4174--4177
\T1/ptm/m/n/10 BASE)/Data/FragmentDescriptors.csv| 

Underfull \hbox (badness 7273) in paragraph at lines 4183--4186
\T1/ptm/m/n/10 and Con-soni ^^PDe-scrip-tors from

Underfull \hbox (badness 10000) in paragraph at lines 4183--4186
\T1/ptm/m/n/10 Chemoin-for-mat-ics [][]$https : / / doi . org /
[64] [65]
Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 De-scrip-

Overfull \hbox (19.3687pt too wide) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 tor/Descriptor

Overfull \hbox (3.88354pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (8.88354pt too wide) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 best fit

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 PMI1,

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 PMI2,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 NPR1,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Ra-

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 dius of

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 In-er-tial

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 shape

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Ec-cen-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 As-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Sphe-

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 roc-ity

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Au-to-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 GET-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 
[66]
Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Fin-ger-print

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (2.77637pt too wide) in paragraph at lines 4413--4413
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Topo-log-i-cal

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Mor-

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 2D Phar-ma-

Overfull \hbox (0.97221pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Fea-

Overfull \hbox (8.75237pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Donor| 

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Ac-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

Overfull \hbox (2.08232pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Aro-

Overfull \hbox (5.422pt too wide) in paragraph at lines 4463--4463
\T1/ptm/m/n/10 matic| 

Overfull \hbox (5.9722pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Halo-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Ba-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/pcr/m/n/10 [#7;+,$([N;H2&+0][$([C,a]);!$([C,a](=O))]),$([N;H1&+0]([$([C,a
]);!

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
\T1/pcr/m/n/10 $([C,a](=O))])[$([C,a]);!$([C,a](=O))]),$([N;H0&+0]([C;!$(C(=O))
])([C;!

Overfull \hbox (9.86208pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Acidic| 
[67 <./picture_5.png (PNG copy)>] [68]
Chapter 2.
[69 <./picture_9.png (PNG copy)>] [70 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [71 <./picture_10.png> <./picture_12.png>] [72 <./picture_11.png>]
[73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83 <./picture_10.jpg>]
[84] [85]
Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 _Chi-ral-i-ty-Pos-si-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 _Re-ac-tion-De-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 mo-lAtomMap-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 molFileIn-ver-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 mol-Rxn-Com-po-
[86] [87]
Underfull \hbox (badness 10000) in paragraph at lines 6033--6037
[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

Underfull \hbox (badness 6559) in paragraph at lines 6033--6037
\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier
[88]
Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAtomIntPropertyList()\T1/ptm/m/n/10 
, \T1/pcr/m/n/10 rdkit.Chem.

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/pcr/m/n/10 rdmolfiles.CreateAtomDoublePropertyList()\T1/ptm/m/n/10 , or \T1
/pcr/m/n/10 rdkit.Chem.rdmolfiles.
[89]
Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/phv/m/n/10 Mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-
[90] [91 <./enhanced_stereo_and1_and2_base.png> <./enhanced_stereo_and1_and2_ex
pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
ng> <./enhanced_stereo_abs_and_expand.png> <./enhanced_stereo_abs_or_base.png>]

Underfull \hbox (badness 7558) in paragraph at lines 6209--6211
[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 6223--6224
[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the

Underfull \hbox (badness 10000) in paragraph at lines 6266--6268
[]

Underfull \hbox (badness 10000) in paragraph at lines 6377--6379
[]
[92] [93 <./EnhancedStereoSSS_molA.png> <./EnhancedStereoSSS_molB.png> <./Enhan
cedStereoSSS_molC.png> <./EnhancedStereoSSS_molD.png> <./EnhancedStereoSSS_molE
.png> <./EnhancedStereoSSS_molF.png> <./EnhancedStereoSSS_molG.png>] [94]
[95] [96]
Underfull \hbox (badness 10000) in paragraph at lines 6693--6703
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,torsionbv_fp(m) as tor-sionbv,mo
rganbv_fp(m) as
[97]
Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
[]

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 1671940 | Cc1cccc(C)c1N1C(=O)c2ccccc2NC(=O)C1C(=O)NCc1ccco1 1318
078

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 | COCN1C(=O)[C@@H]2C[C@@H](O)CN2C(=O)c2ccccc21 1318783 |

Overfull \hbox (31.51144pt too wide) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 O/N=C1/Nc2ccccc2C(=S)N2CSCC12 1318127 | CC(=O)O[C@H]1C[C@H]2C(=S
)Nc3ccccc3C(=S)N2C1

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 1308578 | O=C1Nc2cc([N+](=O)[O-])ccc2C(=O)N2CCC[C@@H]12 1417168 
|

Underfull \hbox (badness 10000) in paragraph at lines 6845--6849
[]\T1/ptm/m/n/10 793329 | Cc1ccc2c(c1)C(c1ccccc1)N(C(=O)c1ccc(OC(C)C)cc1)CC(=O)
N2 921215

Overfull \hbox (36.73141pt too wide) in paragraph at lines 6845--6849
\T1/ptm/m/n/10 CCOC(=O)[C@H]1[C@H]2COc3ccc(Cl)cc3[C@@H]2N2C(=O)c3cc(C)ccc3NC(=O
)[C@@]12C
[98]
Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
[]

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 1882516 | COc1cccc(CN(C)Cc2nc(C(C)C)no2)c1 2194441 |

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 Cc1nc([C@](C)(O)C#Cc2ccc3c(c2)-c2nc(C(N)=O)sc2[C@@H](F)CO3)no1 1
881742

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 | CCOc1ccc(C(F)(F)F)cc1NC(=O)NCc1noc(C)n1 1949861 | FC(F)(F)c1cc
c(-c2nc(-

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 c3ccc4nc[nH]c4c3)no2)cc1 1949860 | FC(F)(F)c1cccc(-c2nc(-c3ccc4n
c[nH]c4c3)no2)c1

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 2172627 | O=c1[nH]cc(-c2cc(Cl)ccc2Oc2cc(F)c(S(=O)(=O)Nc3ncns3)cc
2F)n2cncc12 ...

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 1848026 | O=C1CCCN1c1cccc(-c2noc([C@H]3CCCCN3C(=O)COc3ccccc3)n2)
c1 1848027

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 | O=C1CN(c2cccc(-c3noc([C@H]4CCCCN4C(=O)COc4ccccc4)n3)c2)C(=O)N1
 1848036 |

Underfull \hbox (badness 10000) in paragraph at lines 6893--6895
[]

Underfull \hbox (badness 7133) in paragraph at lines 6896--6907
[]\T1/ptm/m/n/10 2213985 |

Overfull \hbox (1217.18044pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 CC[C@H](C)[C@@H]1NC(=O)[C@@H]2CCCN2C(=O)[C@@H]2CCCN2C(=O)[C@H]([
C@@H](C)CC)NC(=O)[C@H](CO)NC(=O)[C@H](C)NC(=O)[C@H]([C@H](C)O)NC(=O)[C@@H]2CSSC
[C@H](NC1=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=
N)N)C(=O)N[C@@H](Cc1c[nH]c3ccccc13)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N2

Overfull \hbox (241.35918pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 CN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H]2
CCCN2C(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@@H]1CC(=O)O

Overfull \hbox (212.21968pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2053463 | NC-CCC[C@H](NC(=O)[C@H](Cc1ccc(OP(=O)(O)O)cc1)NC(=O)Cc
1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O

Overfull \hbox (822.66353pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2060743 | CC-C-C-C-C-C-C-C-C-C-C-C-C-C-CNC(=O)CN(CC(=O)NC(C)(C)C
(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C
CCNC(=N)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(N)=O)C(N)=O)C
(=O)c1cccnc1

Overfull \hbox (635.7045pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2060744 | CC-C-C-C-C-C-C-C-C-C-C-C-C-CCN(CCCCCCCCCCCCCCCC)CCCCCC
(=O)NC(C)(C)C(=O)NC(Cc1ccccc1)C(=O)NC(CC(C)C)C(=O)NC(Cc1ccccc1)C(=O)NC(CCCNC(=N
)N)C(=O)N1CCCC1C(=O)NC(CCCNC(=N)N)C(=O)NC(CC(N)=O)C(N)=O

Overfull \hbox (502.09679pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2077784 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CCSC)NC1=O

Overfull \hbox (499.85667pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2077779 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (586.79553pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC1=O 2077782 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23
)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CCSC)
NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 10000) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC1=O 2077780 | CC(C)C[C@@H]1NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (309.87823pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc
2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 7133) in paragraph at lines 6925--6936
[]\T1/ptm/m/n/10 2213985 |

Overfull \hbox (1217.18044pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 CC[C@H](C)[C@@H]1NC(=O)[C@@H]2CCCN2C(=O)[C@@H]2CCCN2C(=O)[C@H]([
C@@H](C)CC)NC(=O)[C@H](CO)NC(=O)[C@H](C)NC(=O)[C@H]([C@H](C)O)NC(=O)[C@@H]2CSSC
[C@H](NC1=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=
N)N)C(=O)N[C@@H](Cc1c[nH]c3ccccc13)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N2

Overfull \hbox (241.35918pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 CN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H]2
CCCN2C(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@@H]1CC(=O)O

Overfull \hbox (212.21968pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2053463 | NC-CCC[C@H](NC(=O)[C@H](Cc1ccc(OP(=O)(O)O)cc1)NC(=O)Cc
1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O

Overfull \hbox (822.66353pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2060743 | CC-C-C-C-C-C-C-C-C-C-C-C-C-C-CNC(=O)CN(CC(=O)NC(C)(C)C
(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C
CCNC(=N)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(N)=O)C(N)=O)C
(=O)c1cccnc1

Overfull \hbox (502.09679pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2077784 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CCSC)NC1=O

Overfull \hbox (499.85667pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2077779 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (586.79553pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2077782 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23
)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CCSC)
NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 10000) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2077780 | CC(C)C[C@@H]1NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (309.87823pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc
2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (722.08417pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2211488 | CC[C@H](C)[C@H](N)C(=O)N[C@H](C(=O)N[C@@H](CC(
C)C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N1CCC[C@H]1C(=O)N[C@H](CCC(=O)N[C@@H](CCC(
=O)N[C@@H](CC(C)C)C(=O)O)Cc1ccccc1)Cc1ccccc1)C(C)C)[C@@H](C)CC 
[99]
Overfull \hbox (95.8203pt too wide) in paragraph at lines 6952--6954
[]

Underfull \hbox (badness 10000) in paragraph at lines 6955--6959
[]\T1/ptm/m/n/10 1609520

Underfull \hbox (badness 10000) in paragraph at lines 6961--6964
[]\T1/ptm/m/n/10 734975 | Cc1cccc(NC(=O)CN(C)S(=O)(=O)c2ccc(Cl)cc2)n1 760426

Underfull \hbox (badness 10000) in paragraph at lines 6961--6964
\T1/ptm/m/n/10 | Cc1cccc(NC(=O)CCCn2cc([N+](=O)[O-])cn2)n1 782786 |

Underfull \hbox (badness 10000) in paragraph at lines 6966--6969
[]\T1/ptm/m/n/10 1478990 | Cc1cccc(NC(=O)Cn2c(=O)sc3cc(C(=O)c4ccccc4)ccc32)n1 1
478787

Underfull \hbox (badness 10000) in paragraph at lines 6966--6969
\T1/ptm/m/n/10 | Cc1cccc(NC(=O)Cn2c(=O)sc3cc(C(=O)c4ccccc4F)ccc32)n1 1955608 |

Overfull \hbox (27.26088pt too wide) in paragraph at lines 6998--7000
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,m from rdk.mols where m@>mol_adj
ust_query_properties(`\T1/ptm/m/it/10 c1cccc(NC(=O)\T1/ptm/m/n/10 )n1',

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
[]

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2146308 | CCn1ncc2cc3nc(c21)NCCOC[C@H](c1ccccc1)NC(=O)N3 2137309
 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H](O)[C@H](c1ccccc1)NC(=O)N3 2102593 |


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@@H](C)O)[C@@H](c1ccccc1)NC(=O)N3


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2171613 | CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@H](C)O)[C@@H](c1ccccc1
)NC(=O)N3

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2111904 | CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1cccc(Cl)c1)NC(=O
)N3

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2173410 | CCn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2189450


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 | Cn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2195752 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1ccccc1)NC(=O)N3 1609520 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 Cc1cccc(NC(=O)c2cc(Br)ccc2C(=O)O)n1 1141456 | CCN(CC)CCCn1cc(NC(
=O)Nc2cccc(-
[100]
Overfull \hbox (27.26088pt too wide) in paragraph at lines 7028--7030
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,m from rdk.mols where m@>mol_adj
ust_query_properties(`\T1/ptm/m/it/10 c1cccc(NC(=O)\T1/ptm/m/n/10 )n1',

Underfull \hbox (badness 10000) in paragraph at lines 7028--7030
\T1/ptm/m/n/10 chembl_25(# `{^^Pad-just-De-gree^^Q:true,^^QadjustDegreeFlags^^Q
:^^QIGNORERINGS|IGNOREDUMMIES^^Q}')

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
[]

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2146308 | CCn1ncc2cc3nc(c21)NCCOC[C@H](c1ccccc1)NC(=O)N3 2137309
 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H](O)[C@H](c1ccccc1)NC(=O)N3 2102593 |


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@@H](C)O)[C@@H](c1ccccc1)NC(=O)N3


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2171613 | CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@H](C)O)[C@@H](c1ccccc1
)NC(=O)N3

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2111904 | CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1cccc(Cl)c1)NC(=O
)N3

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2173410 | CCn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2189450


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 | Cn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2195752 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1ccccc1)NC(=O)N3 1609520 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 Cc1cccc(NC(=O)c2cc(Br)ccc2C(=O)O)n1 1141456 | CCN(CC)CCCn1cc(NC(
=O)Nc2cccc(-
[101]
Overfull \hbox (167.39018pt too wide) in paragraph at lines 7116--7118
[]

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
[]\T1/ptm/m/n/10 $$ se-lect mol-regno,m,tanimoto_sml(morganbv_fp(mol_from_smile
s($1::cstring)),mfp2)

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
\T1/ptm/m/n/10 as sim-i-lar-ity from rdk.fps join rdk.mols us-ing (mol-regno) w
here

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
\T1/ptm/m/n/10 mor-ganbv_fp(mol_from_smiles($1::cstring))%mfp2 or-der by mor-

Underfull \hbox (badness 10000) in paragraph at lines 7157--7161
[]\T1/ptm/m/n/10 751668 | COc1ccc2nc(NC(=O)[C@@H]3CCCN3C(=O)c3cccs3)sc2c1 |

Underfull \hbox (badness 10000) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 0.619718309859155 740754 | Cc1ccc(NC(=O)C2CCCN2C(=O)c2cccs2)cc1C
 |

Overfull \hbox (26.79242pt too wide) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 0.606060606060606 732905 | O=C(Nc1ccc(S(=O)(=O)N2CCCC2)cc1)C1CCC
N1C(=O)c1cccs1

Overfull \hbox (12.17265pt too wide) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 | 0.602941176470588 810850 | Cc1cc(C)n(-c2ccc(NC(=O)C3CCCCN3C(=O
)c3cccs3)cc2)n1

Overfull \hbox (14.07268pt too wide) in paragraph at lines 7163--7168
[]

Underfull \hbox (badness 6725) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 779258 | CC1CCN(S(=O)(=O)c2ccc(NC(=O)[C@@H]3CCCN3C(=O)c3cccs3)cc
2)CC1 |

Overfull \hbox (22.98222pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 0.569444444444444 472441 | Cc1ccc2nc(-c3ccc(NC(=O)C4CCN(S(=O)(=O
)C(C)C)CC4)cc3)sc2c1

Overfull \hbox (57.63208pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 | 0.569444444444444 745651 | Cc1ccc(NC(=O)[C@@H]2CCCN2C(=O)c2ccc
s2)cc1S(=O)(=O)N1CCCCC1

Overfull \hbox (52.96193pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 | 0.567567567567568 472510 | Cc1ccc2nc(-c3ccc(NC(=O)C4CCN(S(=O)(
=O)c5cccc(Cl)c5)CC4)cc3)sc2c1

Underfull \hbox (badness 10000) in paragraph at lines 7184--7187
[]\T1/ptm/m/n/10 2138088 |

Underfull \hbox (badness 10000) in paragraph at lines 7184--7187
\T1/ptm/m/n/10 CN(CC(=O)O)c1nc2ccc([N+](=O)[O-])cc2s1 | 0.673913043478261 10402
55 |
[102]
Underfull \hbox (badness 10000) in paragraph at lines 7192--7194
[]\T1/ptm/m/n/10 441378 |

Overfull \hbox (43.9108pt too wide) in paragraph at lines 7285--7287
[]
[103]
Underfull \hbox (badness 10000) in paragraph at lines 7304--7305
[]\T1/ptm/m/n/10 [#6]-[#6](=[#8])-[#7]-[#6](-[#6](=[#8])-[#7]1-[#6]-[#6]-[#6]-[
#6]-1-[#6](=[#8])-[#7]-[#6](-

Overfull \hbox (139.57957pt too wide) in paragraph at lines 7315--7317
[]

Underfull \hbox (badness 10000) in paragraph at lines 7341--7342
[]\T1/ptm/m/n/10 [#6]-[#6]-[#8]-[#6](-[#6](=[#8])-[#7]-[#6](-[#6])-[#6](-,:[#6]
)-,:[#6])-[#6](-[#8])-[#6](-[#8])-

Underfull \hbox (badness 10000) in paragraph at lines 7357--7358
[]\T1/ptm/m/n/10 [#6]-,:[#6,#7]-[#8,#6]-[#6,#7](-[#6,#8]-[#7,#6]-,:[#6,#7]-,:[#
6,#7]-,:[#7,#6]-,:[#6])-[#6,#7]-

Overfull \hbox (77.20956pt too wide) in paragraph at lines 7368--7371
[]\T1/ptm/m/n/10 chembl_25=# se-lect fmcs_smiles(str,'{^^PAtomCompare^^Q:^^QAny
^^Q,^^QCompleteRingsOnly^^Q:true,^^QThreshold^^Q:0.8,^^QTimeout^^Q:60}')

Underfull \hbox (badness 10000) in paragraph at lines 7378--7379
[]\T1/ptm/m/n/10 [#8]=[#6](-[#7]-[#6]1:[#6]:[#6]:[#6](:[#6]:[#6]:1)-[#6](=[#8])
-[#7]1-[#6]-[#6]-[#6]-[#6,#7]-
[104] [105] [106] [107] [108] [109]
Underfull \hbox (badness 7851) in paragraph at lines 7828--7830
[]\T1/ptm/m/n/10 ### Re-nam-ing a cmake op-tion The cmake op-tion \T1/ptm/m/it/
10 RDK_OPTIMIZE_NATIVE \T1/ptm/m/n/10 has been re-named to
[110] [111] [112]
Chapter 3.
[113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124]
[125] [126] [127] [128] [129] [130]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Underfull \hbox (badness 10000) in paragraph at lines 9203--9205
[]\T1/ptm/m/n/10 implicitly-deleted copy con-struc-tor of `std::__1::unique_ptr
<RDKit::RWMol,

Overfull \hbox (92.21841pt too wide) in paragraph at lines 9213--9213
[]

Underfull \hbox (badness 10000) in paragraph at lines 9213--9213


Underfull \hbox (badness 10000) in paragraph at lines 9215--9217
[]\T1/ptm/m/n/10 copy con-struc-tor is im-plic-itly deleted be-cause `unique_pt
r<RDKit::RWMol,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9226.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9226.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9247--9248
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/GraphMol.h> #include 
<GraphMol/FileParsers/
[131]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9286--9290
[]\T1/ptm/m/n/10 If the molecule can't be san-i-tized af-ter SMILES pars-ing, a
n \T1/ptm/m/it/10 RD-Kit::MolSanitizeException \T1/ptm/m/n/10 (de-rived

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.

[132]
Chapter 4.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.

[133] [134]
Chapter 5.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.

[135] [136]
Chapter 6.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9349--9356
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 mol-295 has 20 atoms. mo
l-54 has 24 atoms. mol-15 has 24 atoms. mol-732

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Underfull \hbox (badness 5652) in paragraph at lines 9359--9362
[]\TS1/cmr/b/n/10 ``[][]`[]\T1/ptm/m/n/10 c++ RD-Kit::SDMolSupplier mol_supplie
r( ^^Pdata/5ht3ligs.sdf^^Q , take-Own-er-ship ); for( int i = int(
[137] [138]
Chapter 7.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9380--9387
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 mol-732 has 26 atoms. mo
l-15 has 24 atoms. mol-54 has 24 atoms. mol-295

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Underfull \hbox (badness 10000) in paragraph at lines 9395--9398
[]\T1/ptm/m/n/10 std::unique_ptr<RDKit::ROMol> mol(
[139] [140]
Chapter 8.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Underfull \hbox (badness 10000) in paragraph at lines 9420--9432
\T1/ptm/m/n/10 ins; ins.push( boost::iostreams::gzip_decompressor() ); std::str
ing comp_sdf_file = file_root +
[141] [142]
Chapter 9.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Overfull \hbox (33.4937pt too wide) in paragraph at lines 9473--9492
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/SmilesParse/SmilesWri
te.h> . . std::shared_ptr<RDKit::ROMol>

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 mol( RDKit::MolFromMolFile( "data/chiral.mol" ) ); std::cout <<

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 RDKit::MolToSmiles( *mol ) << std::endl; \TS1/cmtt/m/n/10 ` \T1/
ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 C[C@H](O)c1ccccc1 \TS1/cmtt/
m/n/10 ` \T1/ptm/m/n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/ptm/m/n/10 [(ex-am-ple3)](./C++Examples/example3.cpp) \TS1/cmtt/m/n/10 `\T1
/pcr/m/n/10 c++ bool isomeric = false; std::cout <<

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 RDKit::MolToSmiles( *mol , isomeric ) << std::endl; \TS1/cmtt/m/
n/10 ` \T1/ptm/m/n/10 pro-duces \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 CC(O)c1ccccc1


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/MolOps.h> . . std::sh
ared_ptr<RDKit::RWMol>

Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
\T1/pcr/m/n/10 mol4( new RDKit::RWMol( *mol ) ); RDKit::MolOps::Kekulize( *mol4
 );

Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
\T1/pcr/m/n/10 std::cout << RDKit::MolToSmiles( *mol4, true, true ) << std::end
l; \TS1/cmtt/m/n/10 ` \T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 `

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Underfull \hbox (badness 10000) in paragraph at lines 9532--9535
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol1( RDKi
t::SmilesToMol( "C1=CC=CN=C1" )
[143]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Underfull \hbox (badness 10000) in paragraph at lines 9568--9570
[]\T1/ptm/m/n/10 To in-clude names in the mol blocks, set the molecule's ^^P_Na
me^^Q prop-erty [(ex-am-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Underfull \hbox (badness 10000) in paragraph at lines 9575--9579
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ mol1 = RDKit::SmilesToMol( "C1CCC1" ); m
ol1->setProp( "_Name" ,

Underfull \hbox (badness 10000) in paragraph at lines 9575--9579
\T1/pcr/m/n/10 "cyclobutane" ); std::cout << RDKit::MolToMolBlock( *mol1 ) << s
td::endl; \TS1/cmtt/m/n/10 `

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Overfull \hbox (9.4937pt too wide) in paragraph at lines 9630--9633
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/Depictor/RDDepictor.h
> . . std::shared_ptr<RDKit::ROMol>

Underfull \hbox (badness 10000) in paragraph at lines 9630--9633
\T1/pcr/m/n/10 mol1( RDKit::SmilesToMol( "C1CCC1" ) ); RDDepict::compute2DCoord
s( *mol1 );

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.

[144]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/DistGeomHelpers/Embed
der.h> #include <GraphMol/

Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 ForceFieldHelpers/MMFF/MMFF.h> . . std::shared_ptr<RDKit::ROMol>


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 mol2( RDKit::SmilesToMol( "C1CCC1" ) ); mol2->setProp( "_Name" ,


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 "cyclobutane3D" ); RDKit::DGeomHelpers::EmbedMolecule( *mol2 );

Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 RDKit::MMFF::MMFFOptimizeMolecule( *mol2 , 1000 , "MMFF94s" ); s
td::cout <<

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Underfull \hbox (badness 10000) in paragraph at lines 9710--9713
[]\TS1/cmr/b/n/10 ``[][]`[]\T1/ptm/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol
3( RD-Kit::MolOps::addHs( []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol2 ) ); RD-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9718--9730
\T1/ptm/m/n/10 am-ple4)](./C++Examples/example4.cpp): \TS1/cmtt/m/n/10 `\T1/pcr
/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol3sp(

Underfull \hbox (badness 10000) in paragraph at lines 9718--9730
\T1/pcr/m/n/10 RDKit::MolOps::addHs( *mol2 ) ); mol3sp->setProp( "_Name" , "cyc
lobutaneSP"

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9737--9738
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol5( RDKi
t::MolOps::removeHs( *mol3 );

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Underfull \hbox (badness 10000) in paragraph at lines 9768--9773
\T1/ptm/m/n/10 mol_supplier( sdf_file , take-Own-er-ship ); std::vector<std::sh
ared_ptr<RDKit::ROMol>> mols; while(
[145] [146]
Chapter 10.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.

[147] [148]
Chapter 11.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.

[149] [150]
Chapter 12.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Underfull \hbox (badness 10000) in paragraph at lines 9910--9912
[]\T1/ptm/m/n/10 const RD-Kit::Atom []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 atom = m
ol2->getAtomWithIdx( 2 ); for(const auto &nbri:

Underfull \hbox (badness 10000) in paragraph at lines 9914--9918
[]\T1/ptm/m/n/10 const RD-Kit::Bond []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 bond = (
[]\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol)[nbri]; un-signed int nbr_idx = bond-

Underfull \hbox (badness 10000) in paragraph at lines 9914--9918
\T1/ptm/m/n/10 >getOtherAtomIdx(atom->getIdx()); int nbr_atnum = bond->getOther
Atom(atom)-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9930.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Underfull \hbox (badness 6477) in paragraph at lines 9952--9954
[]\T1/ptm/m/n/10 const RD-Kit::Atom []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 atom = m
ol->getAtomWithIdx( i ); std::cout << mol->getRingInfo()-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.

[151]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.

[152]
Chapter 13.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol1( RDKit:
:SmilesToMol( "CCO" ) );

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 std::cout << "Number of atoms : " << mol1->getNumAtoms() << std:
:endl;

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 std::shared_ptr<RDKit::ROMol> mol2( RDKit::MolOps::addHs( *mol1 
) ); std::cout

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 mol3( new RDKit::RWMol( *mol2 ) ); RDKit::MolOps::removeHs( *mol
3 ); std::cout

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 << "Number of atoms : " << mol3->getNumAtoms() << std::endl; \TS
1/cmtt/m/n/10 ` \T1/ptm/m/n/10 which re-turns the

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.

[153]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
[]\T1/ptm/m/n/10 Bonds can be re-stored to the aro-matic bond type us-ing the \
T1/ptm/m/it/10 RD-Kit::MolOps::sanitizeMol \T1/ptm/m/n/10 func-

Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
\T1/ptm/m/n/10 tion: \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ RDKit::MolOps::saniti
zeMol( *mol ); std::cout << "Order : " <<

Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
\T1/pcr/m/n/10 mol->getBondWithIdx( 0 )->getBondType() << std::endl; std::cout 
<< "Aromatic

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Underfull \hbox (badness 6220) in paragraph at lines 10149--10168
\T1/ptm/m/n/10 They are part of the RD-De-pict names-pace, is ac-cessed via the
 \T1/ptm/m/it/10 RD-De-pict::Compute2DCoords \T1/ptm/m/n/10 func-

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/ptm/m/n/10 tion [(ex-am-ple10.cpp)](./C++Examples/example10.cpp): \TS1/cmtt
/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/Depictor/

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/pcr/m/n/10 RDDepictor.h> . . std::shared_ptr<RDKit::RWMol>xs mol( new RDKit
::RWMol(

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/pcr/m/n/10 *RDKit::SmilesToMol( "c1nccc2n1ccc2" ) ) ); RDDepict::compute2DC
oords( *mol

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Underfull \hbox (badness 10000) in paragraph at lines 10178--10182
[]\T1/ptm/m/n/10 #endif []\TS1/cmr/b/n/10 ``[]\TS1/cmr/m/n/10 ` \T1/ptm/m/n/10 
The [CMake-Lists.txt](./C++Examples/CMakeLists.txt) with the ex-am-ples de-fine
s

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.

[154]
Chapter 14.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Underfull \hbox (badness 10000) in paragraph at lines 10301--10316
[]\T1/ptm/m/n/10 // new Riniker and Lan-drum CSD-based method // us-ing the pa-
ram-e-ters class RD-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
[]\T1/ptm/m/n/10 The RD-Kit also has an im-ple-men-ta-tion of the MMFF94 force 
field avail-able

Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
\T1/ptm/m/n/10 [[4]](#mmff1), [[5]](#mmff2), [[6]](#mmff3), [[7]](#mmff4), [[8]
](#mmffs). [(ex-am-

Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
\T1/pcr/m/n/10 MMFF.h> . . RDKit::MMFF::MMFFOptimizeMolecule( *mol2 , 1000 , "M
MFF94s" ); \TS1/cmtt/m/n/10 `
[155]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Underfull \hbox (badness 6859) in paragraph at lines 10375--10379
[]\T1/ptm/m/n/10 static_cast<const std::vector<unsigned int> []\T1/ptm/b/n/10 *
[]\T1/ptm/m/n/10 >( 0 ) , &m2cids , static_cast<const RD-Nu-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 h> . . RDKit::ROMol *mol1 = RDKit::SmilesToMol( "c1ccncc1" ); st
d::string

Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 pickle; RDKit::MolPickler::pickleMol( *mol1 , pickle ); RDKit::R
OMol

Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 mol2; RDKit::MolPickler::molFromPickle( pickle , mol2 ); std::co
ut <<
[156]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 6842) in paragraph at lines 10483--10493
[]\T1/ptm/m/n/10 } pickle_istream.close(); std::cout << ^^PRead ^^Q << read_cnt
 << ^^Q molecules.^^Q << std::endl; \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 By

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 default, the pickling process does not preserve any properties a
ttached

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 to the molecule, which includes the molecule name (property "_Na
me"). This

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 can be forced: \TS1/cmtt/m/n/10 ```\T1/pcr/m/n/10 c++ RDKit::Mol
Pickler::pickleMol( *mol , pickle_ostream,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 <GraphMol/MolDraw2D/MolDraw2DSVG.h> . . RDKit::SDMolSupplier mol
_supplier(

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 "data/cdk2.sdf" , true ); RDKit::ROMol *mol1 = mol_supplier.next
();

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 RDDepict::compute2DCoords( *mol1 ); std::ofstream outs("cdk_mol1
.svg");

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 RDKit::MolDraw2DSVG svg_drawer(300, 300, outs); svg_drawer.drawM
olecule(

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 *mol1 ); svg_drawer.finishDrawing(); outs.close(); \TS1/cmtt/m/n
/10 ` \T1/ptm/m/n/10 The pro-ce-dure for a PNG is

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/ptm/m/n/10 slightly dif-fer-ent: [(ex-am-ple13.cpp)](./C++Examples/example1
3.cpp): \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 MolDraw2D/MolDraw2DSVG.h> . . RDKit::MolDraw2DCairo cairo_drawer
(300, 300);

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 cairo_drawer.drawMolecule(*mol1); cairo_drawer.finishDrawing(); 
cairo_drawer.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Underfull \hbox (badness 10000) in paragraph at lines 10544--10552
[]\T1/ptm/m/n/10 } Mol-Draw2DSVG drawer(750, 400, 250, 200); drawer.drawMolecul
es(mols);
[157]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 7777) in paragraph at lines 10558--10582
\T1/ptm/m/n/10 have matched a sub-struc-ture query [(ex-am-ple17.cpp)](./C++Exa
mples/example17.cpp): \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ drawer.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 std::map<int, DrawColour> atom_cols; atom_cols.insert(std::make_
pair(13,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 DrawColour(1.0, 0.0, 0.0))); atom_cols.insert(std::make_pair(14,
 DrawColour(0.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 0, 1.0, 0.0))); atom_cols.insert(std::make_pair(15, DrawColour(0
.0, 0.0,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 1.0))); atom_cols.insert(std::make_pair(16, DrawColour(1.0, 0.55
, 0.0)));

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 std::map<int, DrawColour> bond_cols; bond_cols.insert(std::make_
pair(13,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 DrawColour(0.8, 0.8, 0.0))); bond_cols.insert(std::make_pair(14,
 DrawColour(0.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 0, 1.0, 1.0))); bond_cols.insert(std::make_pair(15, DrawColour(1
.0, 0.0,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 1.0))); drawer.drawMolecule(*mol, &hit1_atoms, &hit1_bonds, &ato
m_cols,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Underfull \hbox (badness 10000) in paragraph at lines 10600--10613
\T1/ptm/m/n/10 >setProp(common_properties::bondNote, ^^Pbar^^Q); drawer.drawOpt
ions().addAtomIndices

Underfull \hbox (badness 10000) in paragraph at lines 10600--10613
\T1/ptm/m/n/10 = true; drawer.drawOptions().addStereoAnnotation = true; drawer.
drawMolecule([]\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 m1);

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Underfull \hbox (badness 10000) in paragraph at lines 10621--10632
[]\T1/ptm/m/n/10 Substructure match-ing can be done us-ing query molecules buil
t from SMARTS. [(ex-am-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Underfull \hbox (badness 10000) in paragraph at lines 10644--10658
\T1/pcr/m/n/10 match, and replaces the contents of \TS1/cmtt/m/n/10 `\T1/pcr/m/
n/10 res\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 with a mapping of the atom indices

Underfull \hbox (badness 10000) in paragraph at lines 10644--10658
\T1/pcr/m/n/10 in the pattern and a set of atoms that match in the molecule. In
 the above

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.

[158] [159] [160]
Chapter 15.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Underfull \hbox (badness 6001) in paragraph at lines 10723--10730
[]\T1/ptm/m/n/10 Substructure match-ing can also be done us-ing molecules built
 from SMILES in-stead of SMARTS:
[161] [162]
Chapter 16.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Underfull \hbox (badness 10000) in paragraph at lines 10756--10763
\T1/ptm/m/n/10 But don't for-get that the se-man-tics of the two lan-guages are
 not ex-actly equiv-a-lent: [(ex-am-

Underfull \hbox (badness 10000) in paragraph at lines 10756--10763
\T1/ptm/m/n/10 ple14.cpp)](./C++Examples/example14.cpp): []\TS1/cmr/b/n/10 ``[]
[]`[]\T1/ptm/m/n/10 c++ RD-Kit::ROMol []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol4 =
 RD-Kit::SmilesToMol(
[163] [164]
Chapter 17.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.

[165] [166]
Chapter 18.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.

[167] [168]
Chapter 19.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Underfull \hbox (badness 10000) in paragraph at lines 10906--10920
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 SMARTS 1 chiral match No
t SMARTS 2 chiral match SMARTS 3 chiral match \TS1/cmtt/m/n/10 `
[169] [170]
Chapter 20.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.

[171] [172]
Chapter 21.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[173] [174]
Chapter 22.
[175] [176]
Chapter 23.
(./RDKit.ind) [177] (./RDKit.aux) )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tcti1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc} </tmp/texfonts/pk/ljfour/jknappen/ec/tcrm1000.600pk> </tmp/texfonts/pk/l
jfour/jknappen/ec/tctt1000.600pk> </tmp/texfonts/pk/ljfour/jknappen/ec/tcrb1000
.600pk> </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw
/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr
o8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></usr/share/tex
live/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1
/urw/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utm
r8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on RDKit.pdf (183 pages, 1467901 bytes).
Transcript written on RDKit.log.
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Log file says output to 'RDKit.pdf'
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'RDKit.toc'
------------
Run number 3 of rule 'pdflatex'
------------
------------
Running 'pdflatex   -recorder  "RDKit.tex"'
------------
Latexmk: Examining 'RDKit.log'
=== TeX engine is 'pdfTeX'
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./RDKit.tex
LaTeX2e <2020-02-02> patch level 5
L3 programming layer <2020-09-24> (./sphinxmanual.cls
Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual)
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty<<t1.cmap>>)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def
(/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def))
(/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)
(./sphinxmulticell.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
(./footnotehyper-sphinx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty)
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
(./sphinxhighlight.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(./sphinxmessages.sty)
Writing index file RDKit.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)
(./RDKit.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(./RDKit.out) (./RDKit.out)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<<ot1.cmap>><<oml.cmap
>><<oms.cmap>><<omx.cmap>>
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] (./RDKit.toc [1] [2] [3]) [4]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Underfull \hbox (badness 10000) in paragraph at lines 177--178
[]\T1/ptm/m/n/10 [stk]([][]$https : / / github . com / lukasturcani / stk$[][])
 ([docs]([][]$https : / / lukasturcani . github . io / stk / docs / build / htm
l/$[][]), [pa-
[1] [2] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.

(/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 242.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 246.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 290--291
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 bash Miniconda3-latest-MacOSX-x86_64.sh con
da install numpy matplotlib conda

Underfull \hbox (badness 10000) in paragraph at lines 290--291
\T1/pcr/m/n/10 install cmake cairo pillow eigen pkg-config conda install boost-
cpp boost

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 302.


Underfull \hbox (badness 10000) in paragraph at lines 307--308
[]\T1/ptm/m/n/10 -DRDK_BUILD_AVALON_SUPPORT=ON -DRDK_BUILD_CAIRO_SUPPORT=ON -

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 310.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 316--317
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 RDBASE=$RDBASE DYLD_FALLBACK_LIBRARY_PATH="
$RDBASE/lib:$PYROOT/lib"
[3]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 331--332
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 bash Anaconda3-5.2.0-x86_64.sh conda instal
l -y cmake cairo pillow eigen

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 341.


Underfull \hbox (badness 10000) in paragraph at lines 348--349
[]\T1/ptm/m/n/10 -DRDK_INSTALL_INTREE=ON -DRDK_INSTALL_STATIC_LIBS=OFF -

Underfull \hbox (badness 5504) in paragraph at lines 348--349
\T1/ptm/m/n/10 DRDK_BUILD_CPP_TESTS=ON -DPYTHON_NUMPY_INCLUDE_PATH=^^Q$(python 
-c `im-port

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 351.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 369--370
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [conda folder]/envs/my-rdkit-env/bin/initdb
 -D /folder/where/data/should/be/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 375--376
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [conda folder]/envs/my-rdkit-env/bin/postgr
es -D /folder/where/data/should/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 384--385
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 [program:postgresql] command=[conda folder]
/envs/my-rdkit-env/bin/postgres

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[4]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[5]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 488--489
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 shellsession $ wget https://github.com/rdkit
/rdkit/archive/Release_XXXX_XX_X.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 558--559
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 cmake -D PYTHON_LIBRARY=/usr/lib/python3.6/
config/libpython3.6.a -D

Underfull \hbox (badness 10000) in paragraph at lines 558--559
\T1/pcr/m/n/10 PYTHON_INCLUDE_DIR=/usr/include/python3.6/ -D PYTHON_EXECUTABLE=
/usr/bin/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[6]
Underfull \hbox (badness 10000) in paragraph at lines 576--577
[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment \T1/ptm/m/it/10 -

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 619--620
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 $ CLASSPATH=$CLASSPATH:$RDBASE/Code/JavaWra
ppers/gmwrapper/org.RDKit.jar

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 jython -Djava.library.path=$RDBASE/Code/JavaWrappers/gmwrapper J
ython 2.2.1 on

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 java1.6.0_20 Type "copyright", "credits" or "license" for more i
nformation.

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 >>> from org.RDKit import * >>> from java import lang >>> lang.S
ystem.

Underfull \hbox (badness 10000) in paragraph at lines 619--620
\T1/pcr/m/n/10 loadLibrary(\TS1/pcr/m/n/10 '\T1/pcr/m/n/10 GraphMolWrap\TS1/pcr
/m/n/10 '\T1/pcr/m/n/10 ) >>> m = RWMol.MolFromSmiles(\TS1/pcr/m/n/10 '\T1/pcr/
m/n/10 c1ccccc1\TS1/pcr/m/n/10 '\T1/pcr/m/n/10 ) >>> m.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 640--641
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 Linking CXX shared library libSLNParse.so /
usr/bin/ld: .../

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 libboost_regex.a(cpp_regex_traits.o): relocation R_X86_64_32S ag
ainst

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 std::basic_string<char, std::char_traits<char>
, std::allocator<char>

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 >::_Rep::_S_empty_rep_storage\TS1/pcr/m/n/10 ' \T1/pcr/m/n/10 ca
n not be used when making a shared object;

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 recompile with -fPIC .../libboost_regex.a: could not read symbol
s: Bad value

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 collect2: ld returned 1 exit status make[2]: *** [Code/GraphMol/
SLNParse/

Underfull \hbox (badness 10000) in paragraph at lines 640--641
\T1/pcr/m/n/10 libSLNParse.so] Error 1 make[1]: *** [Code/GraphMol/SLNParse/CMa
keFiles/
[7]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 654.


Overfull \hbox (34.06519pt too wide) in paragraph at lines 654--657
[]\TS1/cmr/b/n/10 ``[]\TS1/cmr/m/n/10 ` \T1/ptm/m/n/10 .../Code/GraphMol/Wrap/E
ditableMol.cpp:114: in-stan-ti-ated from here .../boost/type_traits/detail/cv_t
raits_impl.hpp:37:

Underfull \hbox (badness 10000) in paragraph at lines 659--660
[]\T1/ptm/m/n/10 Please sub-mit a full bug re-port, with pre-pro-cessed source 
if ap-pro-pri-ate. See

Underfull \hbox (badness 10000) in paragraph at lines 659--660
\T1/ptm/m/n/10 <URL:<[][]$http : / / bugzilla . redhat . com / bugzilla$[][]>> 
for in-struc-tions. Pre-pro-cessed source

Underfull \hbox (badness 6792) in paragraph at lines 659--660
\T1/ptm/m/n/10 stored into /tmp/ccgSaXge.out file, please at-tach this to your 
bu-gre-port. make[2]: \T1/ptm/b/n/10 *

Underfull \hbox (badness 10000) in paragraph at lines 659--660
\T1/ptm/b/n/10 [Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o] Er-
ror 1 make[1]:\T1/ptm/m/n/10 *

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 662.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 706--707
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 export MACOSX_DEPLOYMENT_TARGET=10.6 export
 LDFLAGS="-Wall -undefined

Underfull \hbox (badness 10000) in paragraph at lines 706--707
\T1/pcr/m/n/10 dynamic_lookup -bundle -arch x86_64" export CFLAGS="-arch x86_64
" ln -s /usr/

Underfull \hbox (badness 10000) in paragraph at lines 706--707
\T1/pcr/m/n/10 bin/gcc /usr/bin/gcc-4.2 ln -s /usr/bin/g++ /usr/bin/g++-4.2 pyt
hon setup.py

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 712--713
[]\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 PYTHON_NUMPY_INCLUDE_PATH /Library/Python/2
.6/site-packages/numpy/core/

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[8]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 759.

[9]
Underfull \hbox (badness 10000) in paragraph at lines 826--827
[]\T1/ptm/m/it/10 cmake -DRDK_BUILD_PYTHON_WRAPPERS=ON -DBOOST_ROOT=C:/boost -

Underfull \hbox (badness 10000) in paragraph at lines 826--827
\T1/ptm/m/it/10 DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_BUILD_AVALON_SUPPORT=ON -

Underfull \hbox (badness 10000) in paragraph at lines 826--827
\T1/ptm/m/it/10 DRDK_BUILD_PGSQL=ON -DPostgreSQL_ROOT=^^QC:Program File-sPost-g
reSQL9.5^^Q -G^^QVisual
[10]
Chapter 1.
[11]
Underfull \hbox (badness 10000) in paragraph at lines 936--937
[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
[12] [13] [14] [15] [16] [17] [18] [19]
Underfull \hbox (badness 10000) in paragraph at lines 1463--1465
[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

Underfull \hbox (badness 7649) in paragraph at lines 1463--1465
\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.

Underfull \hbox (badness 10000) in paragraph at lines 1483--1488
[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
[20 <./picture_1.png (PNG copy)> <./picture_0.png (PNG copy)> <./picture_3.png 
(PNG copy)> <./picture_2.png> <./picture_4.png>] [21] [22] [23 <./cdk2_mol1.png
> <./cdk2_mol2.png>] [24 <./cdk2_molgrid.png (PNG copy)>]
Underfull \vbox (badness 2707) detected at line 1787
[25 <./cdk2_molgrid_aligned.png (PNG copy)>] [26 <./atom_highlights_1.png>]
[27 <./atom_highlights_2.png> <./atom_highlights_3.png>]
Overfull \vbox (1.09758pt too high) detected at line 1883
[28 <./atom_annotation_1.png>] [29] [30] [31] [32 <./substruct_search_parameter
s1.png>] [33] [34] [35] [36] [37] [38] [39] [40] [41 <./mfp2_bit872.png> <./rdk
_bit1553.png>] [42 <./rdk_bit1553_2.png>] [43] [44 <./similarity_map_fp1.png>]
[45 <./similarity_map_fp2.png>] [46 <./similarity_map_fp3.png>] [47] [48 <./sim
ilarity_map_charges.png>] [49 <./similarity_map_crippen.png>] [50] [51]
[52] [53] [54] [55] [56] [57] [58]
Underfull \hbox (badness 6792) in paragraph at lines 3599--3602
[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
[59] [60] [61] [62 <./picture_6.png>] [63]
Underfull \hbox (badness 10000) in paragraph at lines 3979--3983
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Underfull \hbox (badness 10000) in paragraph at lines 3989--3993
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Overfull \hbox (26.64615pt too wide) in paragraph at lines 4057--4058
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}Rings| 

Overfull \hbox (91.89552pt too wide) in paragraph at lines 4062--4063
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}{Hetero,Carbo}cycles| 

Underfull \hbox (badness 10000) in paragraph at lines 4091--4094
[]|\T1/ptm/m/n/10 Number of bridge-head atoms

Underfull \hbox (badness 10000) in paragraph at lines 4119--4122
\T1/ptm/m/n/10 tions [][]$http : / / www . chemcomp . com /

Underfull \hbox (badness 10000) in paragraph at lines 4128--4132
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4138--4142
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4174--4177
[]|\T1/ptm/m/n/10 implemented us-ing a set of

Underfull \hbox (badness 10000) in paragraph at lines 4174--4177
\T1/ptm/m/n/10 SMARTS def-i-ni-tions in $(RD-

Overfull \hbox (9.18636pt too wide) in paragraph at lines 4174--4177
\T1/ptm/m/n/10 BASE)/Data/FragmentDescriptors.csv| 

Underfull \hbox (badness 7273) in paragraph at lines 4183--4186
\T1/ptm/m/n/10 and Con-soni ^^PDe-scrip-tors from

Underfull \hbox (badness 10000) in paragraph at lines 4183--4186
\T1/ptm/m/n/10 Chemoin-for-mat-ics [][]$https : / / doi . org /
[64] [65]
Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 De-scrip-

Overfull \hbox (19.3687pt too wide) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 tor/Descriptor

Overfull \hbox (3.88354pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (8.88354pt too wide) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 best fit

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 PMI1,

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 PMI2,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 NPR1,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Ra-

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 dius of

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 In-er-tial

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 shape

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Ec-cen-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 As-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Sphe-

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
\T1/ptm/m/n/10 roc-ity

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 Au-to-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 GET-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4333--4333
[]\T1/ptm/m/n/10 C++| 
[66]
Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Fin-ger-print

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (2.77637pt too wide) in paragraph at lines 4413--4413
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Topo-log-i-cal

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 Mor-

Underfull \hbox (badness 10000) in paragraph at lines 4413--4413
[]\T1/ptm/m/n/10 2D Phar-ma-

Overfull \hbox (0.97221pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Fea-

Overfull \hbox (8.75237pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Donor| 

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Ac-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

Overfull \hbox (2.08232pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Aro-

Overfull \hbox (5.422pt too wide) in paragraph at lines 4463--4463
\T1/ptm/m/n/10 matic| 

Overfull \hbox (5.9722pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Halo-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Ba-

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
[]\T1/pcr/m/n/10 [#7;+,$([N;H2&+0][$([C,a]);!$([C,a](=O))]),$([N;H1&+0]([$([C,a
]);!

Underfull \hbox (badness 10000) in paragraph at lines 4463--4463
\T1/pcr/m/n/10 $([C,a](=O))])[$([C,a]);!$([C,a](=O))]),$([N;H0&+0]([C;!$(C(=O))
])([C;!

Overfull \hbox (9.86208pt too wide) in paragraph at lines 4463--4463
[]\T1/ptm/m/n/10 Acidic| 
[67 <./picture_5.png (PNG copy)>] [68]
Chapter 2.
[69 <./picture_9.png (PNG copy)>] [70 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [71 <./picture_10.png> <./picture_12.png>] [72 <./picture_11.png>]
[73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83 <./picture_10.jpg>]
[84] [85]
Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 _Chi-ral-i-ty-Pos-si-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 _Re-ac-tion-De-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 mo-lAtomMap-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 molFileIn-ver-

Underfull \hbox (badness 10000) in paragraph at lines 5894--5894
[]\T1/ptm/m/n/10 mol-Rxn-Com-po-
[86] [87]
Underfull \hbox (badness 10000) in paragraph at lines 6033--6037
[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

Underfull \hbox (badness 6559) in paragraph at lines 6033--6037
\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier
[88]
Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAtomIntPropertyList()\T1/ptm/m/n/10 
, \T1/pcr/m/n/10 rdkit.Chem.

Underfull \hbox (badness 10000) in paragraph at lines 6082--6085
\T1/pcr/m/n/10 rdmolfiles.CreateAtomDoublePropertyList()\T1/ptm/m/n/10 , or \T1
/pcr/m/n/10 rdkit.Chem.rdmolfiles.
[89]
Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/phv/m/n/10 Mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6194--6194
[]\T1/ptm/m/n/10 mix-
[90] [91 <./enhanced_stereo_and1_and2_base.png> <./enhanced_stereo_and1_and2_ex
pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
ng> <./enhanced_stereo_abs_and_expand.png> <./enhanced_stereo_abs_or_base.png>]

Underfull \hbox (badness 7558) in paragraph at lines 6209--6211
[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 6223--6224
[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the

Underfull \hbox (badness 10000) in paragraph at lines 6266--6268
[]

Underfull \hbox (badness 10000) in paragraph at lines 6377--6379
[]
[92] [93 <./EnhancedStereoSSS_molA.png> <./EnhancedStereoSSS_molB.png> <./Enhan
cedStereoSSS_molC.png> <./EnhancedStereoSSS_molD.png> <./EnhancedStereoSSS_molE
.png> <./EnhancedStereoSSS_molF.png> <./EnhancedStereoSSS_molG.png>] [94]
[95] [96]
Underfull \hbox (badness 10000) in paragraph at lines 6693--6703
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,torsionbv_fp(m) as tor-sionbv,mo
rganbv_fp(m) as
[97]
Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
[]

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 1671940 | Cc1cccc(C)c1N1C(=O)c2ccccc2NC(=O)C1C(=O)NCc1ccco1 1318
078

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 | COCN1C(=O)[C@@H]2C[C@@H](O)CN2C(=O)c2ccccc21 1318783 |

Overfull \hbox (31.51144pt too wide) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 O/N=C1/Nc2ccccc2C(=S)N2CSCC12 1318127 | CC(=O)O[C@H]1C[C@H]2C(=S
)Nc3ccccc3C(=S)N2C1

Underfull \hbox (badness 10000) in paragraph at lines 6835--6843
\T1/ptm/m/n/10 1308578 | O=C1Nc2cc([N+](=O)[O-])ccc2C(=O)N2CCC[C@@H]12 1417168 
|

Underfull \hbox (badness 10000) in paragraph at lines 6845--6849
[]\T1/ptm/m/n/10 793329 | Cc1ccc2c(c1)C(c1ccccc1)N(C(=O)c1ccc(OC(C)C)cc1)CC(=O)
N2 921215

Overfull \hbox (36.73141pt too wide) in paragraph at lines 6845--6849
\T1/ptm/m/n/10 CCOC(=O)[C@H]1[C@H]2COc3ccc(Cl)cc3[C@@H]2N2C(=O)c3cc(C)ccc3NC(=O
)[C@@]12C
[98]
Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
[]

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 1882516 | COc1cccc(CN(C)Cc2nc(C(C)C)no2)c1 2194441 |

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 Cc1nc([C@](C)(O)C#Cc2ccc3c(c2)-c2nc(C(N)=O)sc2[C@@H](F)CO3)no1 1
881742

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 | CCOc1ccc(C(F)(F)F)cc1NC(=O)NCc1noc(C)n1 1949861 | FC(F)(F)c1cc
c(-c2nc(-

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 c3ccc4nc[nH]c4c3)no2)cc1 1949860 | FC(F)(F)c1cccc(-c2nc(-c3ccc4n
c[nH]c4c3)no2)c1

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 2172627 | O=c1[nH]cc(-c2cc(Cl)ccc2Oc2cc(F)c(S(=O)(=O)Nc3ncns3)cc
2F)n2cncc12 ...

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 1848026 | O=C1CCCN1c1cccc(-c2noc([C@H]3CCCCN3C(=O)COc3ccccc3)n2)
c1 1848027

Underfull \hbox (badness 10000) in paragraph at lines 6866--6878
\T1/ptm/m/n/10 | O=C1CN(c2cccc(-c3noc([C@H]4CCCCN4C(=O)COc4ccccc4)n3)c2)C(=O)N1
 1848036 |

Underfull \hbox (badness 10000) in paragraph at lines 6893--6895
[]

Underfull \hbox (badness 7133) in paragraph at lines 6896--6907
[]\T1/ptm/m/n/10 2213985 |

Overfull \hbox (1217.18044pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 CC[C@H](C)[C@@H]1NC(=O)[C@@H]2CCCN2C(=O)[C@@H]2CCCN2C(=O)[C@H]([
C@@H](C)CC)NC(=O)[C@H](CO)NC(=O)[C@H](C)NC(=O)[C@H]([C@H](C)O)NC(=O)[C@@H]2CSSC
[C@H](NC1=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=
N)N)C(=O)N[C@@H](Cc1c[nH]c3ccccc13)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N2

Overfull \hbox (241.35918pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 CN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H]2
CCCN2C(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@@H]1CC(=O)O

Overfull \hbox (212.21968pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2053463 | NC-CCC[C@H](NC(=O)[C@H](Cc1ccc(OP(=O)(O)O)cc1)NC(=O)Cc
1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O

Overfull \hbox (822.66353pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2060743 | CC-C-C-C-C-C-C-C-C-C-C-C-C-C-CNC(=O)CN(CC(=O)NC(C)(C)C
(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C
CCNC(=N)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(N)=O)C(N)=O)C
(=O)c1cccnc1

Overfull \hbox (635.7045pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2060744 | CC-C-C-C-C-C-C-C-C-C-C-C-C-CCN(CCCCCCCCCCCCCCCC)CCCCCC
(=O)NC(C)(C)C(=O)NC(Cc1ccccc1)C(=O)NC(CC(C)C)C(=O)NC(Cc1ccccc1)C(=O)NC(CCCNC(=N
)N)C(=O)N1CCCC1C(=O)NC(CCCNC(=N)N)C(=O)NC(CC(N)=O)C(N)=O

Overfull \hbox (502.09679pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2077784 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CCSC)NC1=O

Overfull \hbox (499.85667pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 2077779 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (586.79553pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC1=O 2077782 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23
)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CCSC)
NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 10000) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC1=O 2077780 | CC(C)C[C@@H]1NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (309.87823pt too wide) in paragraph at lines 6896--6907
\T1/ptm/m/n/10 ])NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc
2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 7133) in paragraph at lines 6925--6936
[]\T1/ptm/m/n/10 2213985 |

Overfull \hbox (1217.18044pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 CC[C@H](C)[C@@H]1NC(=O)[C@@H]2CCCN2C(=O)[C@@H]2CCCN2C(=O)[C@H]([
C@@H](C)CC)NC(=O)[C@H](CO)NC(=O)[C@H](C)NC(=O)[C@H]([C@H](C)O)NC(=O)[C@@H]2CSSC
[C@H](NC1=O)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(=
N)N)C(=O)N[C@@H](Cc1c[nH]c3ccccc13)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N2

Overfull \hbox (241.35918pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 CN1C(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(O)cc2)NC(=O)[C@@H]2
CCCN2C(=O)[C@H](Cc2ccc3ccccc3c2)NC(=O)[C@@H]1CC(=O)O

Overfull \hbox (212.21968pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2053463 | NC-CCC[C@H](NC(=O)[C@H](Cc1ccc(OP(=O)(O)O)cc1)NC(=O)Cc
1ccccc1)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(N)=O

Overfull \hbox (822.66353pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2060743 | CC-C-C-C-C-C-C-C-C-C-C-C-C-C-CNC(=O)CN(CC(=O)NC(C)(C)C
(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C
CCNC(=N)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CC(N)=O)C(N)=O)C
(=O)c1cccnc1

Overfull \hbox (502.09679pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2077784 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CCSC)NC1=O

Overfull \hbox (499.85667pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 2077779 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(
C)C)NC(=O)[C@@H]2CCCN2C(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C
)NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (586.79553pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2077782 | CC[C@H](C)[C@@H]1NC(=O)[C@H](Cc2c[nH]c3ccccc23
)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CCSC)
NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC[S+](C)[O-

Underfull \hbox (badness 10000) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2077780 | CC(C)C[C@@H]1NC(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (309.87823pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC(=O)[C@H](C(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC(=O)[C@H](Cc
2ccccc2)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@@H]2CCCN2C(=O)[C@H](CC[S+](C)[O-

Overfull \hbox (722.08417pt too wide) in paragraph at lines 6925--6936
\T1/ptm/m/n/10 ])NC1=O 2211488 | CC[C@H](C)[C@H](N)C(=O)N[C@H](C(=O)N[C@@H](CC(
C)C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N1CCC[C@H]1C(=O)N[C@H](CCC(=O)N[C@@H](CCC(
=O)N[C@@H](CC(C)C)C(=O)O)Cc1ccccc1)Cc1ccccc1)C(C)C)[C@@H](C)CC 
[99]
Overfull \hbox (95.8203pt too wide) in paragraph at lines 6952--6954
[]

Underfull \hbox (badness 10000) in paragraph at lines 6955--6959
[]\T1/ptm/m/n/10 1609520

Underfull \hbox (badness 10000) in paragraph at lines 6961--6964
[]\T1/ptm/m/n/10 734975 | Cc1cccc(NC(=O)CN(C)S(=O)(=O)c2ccc(Cl)cc2)n1 760426

Underfull \hbox (badness 10000) in paragraph at lines 6961--6964
\T1/ptm/m/n/10 | Cc1cccc(NC(=O)CCCn2cc([N+](=O)[O-])cn2)n1 782786 |

Underfull \hbox (badness 10000) in paragraph at lines 6966--6969
[]\T1/ptm/m/n/10 1478990 | Cc1cccc(NC(=O)Cn2c(=O)sc3cc(C(=O)c4ccccc4)ccc32)n1 1
478787

Underfull \hbox (badness 10000) in paragraph at lines 6966--6969
\T1/ptm/m/n/10 | Cc1cccc(NC(=O)Cn2c(=O)sc3cc(C(=O)c4ccccc4F)ccc32)n1 1955608 |

Overfull \hbox (27.26088pt too wide) in paragraph at lines 6998--7000
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,m from rdk.mols where m@>mol_adj
ust_query_properties(`\T1/ptm/m/it/10 c1cccc(NC(=O)\T1/ptm/m/n/10 )n1',

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
[]

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2146308 | CCn1ncc2cc3nc(c21)NCCOC[C@H](c1ccccc1)NC(=O)N3 2137309
 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H](O)[C@H](c1ccccc1)NC(=O)N3 2102593 |


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@@H](C)O)[C@@H](c1ccccc1)NC(=O)N3


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2171613 | CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@H](C)O)[C@@H](c1ccccc1
)NC(=O)N3

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2111904 | CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1cccc(Cl)c1)NC(=O
)N3

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 2173410 | CCn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2189450


Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 | Cn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2195752 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1ccccc1)NC(=O)N3 1609520 |

Underfull \hbox (badness 10000) in paragraph at lines 7005--7016
\T1/ptm/m/n/10 Cc1cccc(NC(=O)c2cc(Br)ccc2C(=O)O)n1 1141456 | CCN(CC)CCCn1cc(NC(
=O)Nc2cccc(-
[100]
Overfull \hbox (27.26088pt too wide) in paragraph at lines 7028--7030
[]\T1/ptm/m/n/10 chembl_25=# se-lect mol-regno,m from rdk.mols where m@>mol_adj
ust_query_properties(`\T1/ptm/m/it/10 c1cccc(NC(=O)\T1/ptm/m/n/10 )n1',

Underfull \hbox (badness 10000) in paragraph at lines 7028--7030
\T1/ptm/m/n/10 chembl_25(# `{^^Pad-just-De-gree^^Q:true,^^QadjustDegreeFlags^^Q
:^^QIGNORERINGS|IGNOREDUMMIES^^Q}')

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
[]

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2146308 | CCn1ncc2cc3nc(c21)NCCOC[C@H](c1ccccc1)NC(=O)N3 2137309
 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H](O)[C@H](c1ccccc1)NC(=O)N3 2102593 |


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@@H](C)O)[C@@H](c1ccccc1)NC(=O)N3


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2171613 | CCn1ncc2cc3nc(c21)CCCO[C@@H]([C@H](C)O)[C@@H](c1ccccc1
)NC(=O)N3

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2111904 | CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1cccc(Cl)c1)NC(=O
)N3

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 2173410 | CCn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2189450


Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 | Cn1ncc2cc3nc(c21)CCCOC[C@H](c1ccccc1)NC(=O)N3 2195752 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 CCn1ncc2cc3nc(c21)C[C@H](O)COC[C@H](c1ccccc1)NC(=O)N3 1609520 |

Underfull \hbox (badness 10000) in paragraph at lines 7035--7046
\T1/ptm/m/n/10 Cc1cccc(NC(=O)c2cc(Br)ccc2C(=O)O)n1 1141456 | CCN(CC)CCCn1cc(NC(
=O)Nc2cccc(-
[101]
Overfull \hbox (167.39018pt too wide) in paragraph at lines 7116--7118
[]

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
[]\T1/ptm/m/n/10 $$ se-lect mol-regno,m,tanimoto_sml(morganbv_fp(mol_from_smile
s($1::cstring)),mfp2)

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
\T1/ptm/m/n/10 as sim-i-lar-ity from rdk.fps join rdk.mols us-ing (mol-regno) w
here

Underfull \hbox (badness 10000) in paragraph at lines 7138--7144
\T1/ptm/m/n/10 mor-ganbv_fp(mol_from_smiles($1::cstring))%mfp2 or-der by mor-

Underfull \hbox (badness 10000) in paragraph at lines 7157--7161
[]\T1/ptm/m/n/10 751668 | COc1ccc2nc(NC(=O)[C@@H]3CCCN3C(=O)c3cccs3)sc2c1 |

Underfull \hbox (badness 10000) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 0.619718309859155 740754 | Cc1ccc(NC(=O)C2CCCN2C(=O)c2cccs2)cc1C
 |

Overfull \hbox (26.79242pt too wide) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 0.606060606060606 732905 | O=C(Nc1ccc(S(=O)(=O)N2CCCC2)cc1)C1CCC
N1C(=O)c1cccs1

Overfull \hbox (12.17265pt too wide) in paragraph at lines 7157--7161
\T1/ptm/m/n/10 | 0.602941176470588 810850 | Cc1cc(C)n(-c2ccc(NC(=O)C3CCCCN3C(=O
)c3cccs3)cc2)n1

Overfull \hbox (14.07268pt too wide) in paragraph at lines 7163--7168
[]

Underfull \hbox (badness 6725) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 779258 | CC1CCN(S(=O)(=O)c2ccc(NC(=O)[C@@H]3CCCN3C(=O)c3cccs3)cc
2)CC1 |

Overfull \hbox (22.98222pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 0.569444444444444 472441 | Cc1ccc2nc(-c3ccc(NC(=O)C4CCN(S(=O)(=O
)C(C)C)CC4)cc3)sc2c1

Overfull \hbox (57.63208pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 | 0.569444444444444 745651 | Cc1ccc(NC(=O)[C@@H]2CCCN2C(=O)c2ccc
s2)cc1S(=O)(=O)N1CCCCC1

Overfull \hbox (52.96193pt too wide) in paragraph at lines 7163--7168
\T1/ptm/m/n/10 | 0.567567567567568 472510 | Cc1ccc2nc(-c3ccc(NC(=O)C4CCN(S(=O)(
=O)c5cccc(Cl)c5)CC4)cc3)sc2c1

Underfull \hbox (badness 10000) in paragraph at lines 7184--7187
[]\T1/ptm/m/n/10 2138088 |

Underfull \hbox (badness 10000) in paragraph at lines 7184--7187
\T1/ptm/m/n/10 CN(CC(=O)O)c1nc2ccc([N+](=O)[O-])cc2s1 | 0.673913043478261 10402
55 |
[102]
Underfull \hbox (badness 10000) in paragraph at lines 7192--7194
[]\T1/ptm/m/n/10 441378 |

Overfull \hbox (43.9108pt too wide) in paragraph at lines 7285--7287
[]
[103]
Underfull \hbox (badness 10000) in paragraph at lines 7304--7305
[]\T1/ptm/m/n/10 [#6]-[#6](=[#8])-[#7]-[#6](-[#6](=[#8])-[#7]1-[#6]-[#6]-[#6]-[
#6]-1-[#6](=[#8])-[#7]-[#6](-

Overfull \hbox (139.57957pt too wide) in paragraph at lines 7315--7317
[]

Underfull \hbox (badness 10000) in paragraph at lines 7341--7342
[]\T1/ptm/m/n/10 [#6]-[#6]-[#8]-[#6](-[#6](=[#8])-[#7]-[#6](-[#6])-[#6](-,:[#6]
)-,:[#6])-[#6](-[#8])-[#6](-[#8])-

Underfull \hbox (badness 10000) in paragraph at lines 7357--7358
[]\T1/ptm/m/n/10 [#6]-,:[#6,#7]-[#8,#6]-[#6,#7](-[#6,#8]-[#7,#6]-,:[#6,#7]-,:[#
6,#7]-,:[#7,#6]-,:[#6])-[#6,#7]-

Overfull \hbox (77.20956pt too wide) in paragraph at lines 7368--7371
[]\T1/ptm/m/n/10 chembl_25=# se-lect fmcs_smiles(str,'{^^PAtomCompare^^Q:^^QAny
^^Q,^^QCompleteRingsOnly^^Q:true,^^QThreshold^^Q:0.8,^^QTimeout^^Q:60}')

Underfull \hbox (badness 10000) in paragraph at lines 7378--7379
[]\T1/ptm/m/n/10 [#8]=[#6](-[#7]-[#6]1:[#6]:[#6]:[#6](:[#6]:[#6]:1)-[#6](=[#8])
-[#7]1-[#6]-[#6]-[#6]-[#6,#7]-
[104] [105] [106] [107] [108] [109]
Underfull \hbox (badness 7851) in paragraph at lines 7828--7830
[]\T1/ptm/m/n/10 ### Re-nam-ing a cmake op-tion The cmake op-tion \T1/ptm/m/it/
10 RDK_OPTIMIZE_NATIVE \T1/ptm/m/n/10 has been re-named to
[110] [111] [112]
Chapter 3.
[113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124]
[125] [126] [127] [128] [129] [130]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9198.


Underfull \hbox (badness 10000) in paragraph at lines 9203--9205
[]\T1/ptm/m/n/10 implicitly-deleted copy con-struc-tor of `std::__1::unique_ptr
<RDKit::RWMol,

Overfull \hbox (92.21841pt too wide) in paragraph at lines 9213--9213
[]

Underfull \hbox (badness 10000) in paragraph at lines 9213--9213


Underfull \hbox (badness 10000) in paragraph at lines 9215--9217
[]\T1/ptm/m/n/10 copy con-struc-tor is im-plic-itly deleted be-cause `unique_pt
r<RDKit::RWMol,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9223.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9226.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9226.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9247--9248
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/GraphMol.h> #include 
<GraphMol/FileParsers/
[131]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9252.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9263.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9286--9290
[]\T1/ptm/m/n/10 If the molecule can't be san-i-tized af-ter SMILES pars-ing, a
n \T1/ptm/m/it/10 RD-Kit::MolSanitizeException \T1/ptm/m/n/10 (de-rived

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9291.

[132]
Chapter 4.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9309.

[133] [134]
Chapter 5.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9332.

[135] [136]
Chapter 6.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9349--9356
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 mol-295 has 20 atoms. mo
l-54 has 24 atoms. mol-15 has 24 atoms. mol-732

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9359.


Underfull \hbox (badness 5652) in paragraph at lines 9359--9362
[]\TS1/cmr/b/n/10 ``[][]`[]\T1/ptm/m/n/10 c++ RD-Kit::SDMolSupplier mol_supplie
r( ^^Pdata/5ht3ligs.sdf^^Q , take-Own-er-ship ); for( int i = int(
[137] [138]
Chapter 7.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9380--9387
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 mol-732 has 26 atoms. mo
l-15 has 24 atoms. mol-54 has 24 atoms. mol-295

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9391.


Underfull \hbox (badness 10000) in paragraph at lines 9395--9398
[]\T1/ptm/m/n/10 std::unique_ptr<RDKit::ROMol> mol(
[139] [140]
Chapter 8.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9420.


Underfull \hbox (badness 10000) in paragraph at lines 9420--9432
\T1/ptm/m/n/10 ins; ins.push( boost::iostreams::gzip_decompressor() ); std::str
ing comp_sdf_file = file_root +
[141] [142]
Chapter 9.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9450.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9458.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Overfull \hbox (33.4937pt too wide) in paragraph at lines 9473--9492
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/SmilesParse/SmilesWri
te.h> . . std::shared_ptr<RDKit::ROMol>

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 mol( RDKit::MolFromMolFile( "data/chiral.mol" ) ); std::cout <<

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 RDKit::MolToSmiles( *mol ) << std::endl; \TS1/cmtt/m/n/10 ` \T1/
ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 C[C@H](O)c1ccccc1 \TS1/cmtt/
m/n/10 ` \T1/ptm/m/n/10 and

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/ptm/m/n/10 [(ex-am-ple3)](./C++Examples/example3.cpp) \TS1/cmtt/m/n/10 `\T1
/pcr/m/n/10 c++ bool isomeric = false; std::cout <<

Underfull \hbox (badness 10000) in paragraph at lines 9473--9492
\T1/pcr/m/n/10 RDKit::MolToSmiles( *mol , isomeric ) << std::endl; \TS1/cmtt/m/
n/10 ` \T1/ptm/m/n/10 pro-duces \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 CC(O)c1ccccc1


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9493.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9502.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/MolOps.h> . . std::sh
ared_ptr<RDKit::RWMol>

Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
\T1/pcr/m/n/10 mol4( new RDKit::RWMol( *mol ) ); RDKit::MolOps::Kekulize( *mol4
 );

Underfull \hbox (badness 10000) in paragraph at lines 9517--9522
\T1/pcr/m/n/10 std::cout << RDKit::MolToSmiles( *mol4, true, true ) << std::end
l; \TS1/cmtt/m/n/10 ` \T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 `

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9534.


Underfull \hbox (badness 10000) in paragraph at lines 9532--9535
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol1( RDKi
t::SmilesToMol( "C1=CC=CN=C1" )
[143]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9566.


Underfull \hbox (badness 10000) in paragraph at lines 9568--9570
[]\T1/ptm/m/n/10 To in-clude names in the mol blocks, set the molecule's ^^P_Na
me^^Q prop-erty [(ex-am-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9577.


Underfull \hbox (badness 10000) in paragraph at lines 9575--9579
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ mol1 = RDKit::SmilesToMol( "C1CCC1" ); m
ol1->setProp( "_Name" ,

Underfull \hbox (badness 10000) in paragraph at lines 9575--9579
\T1/pcr/m/n/10 "cyclobutane" ); std::cout << RDKit::MolToMolBlock( *mol1 ) << s
td::endl; \TS1/cmtt/m/n/10 `

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9606.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9632.


Overfull \hbox (9.4937pt too wide) in paragraph at lines 9630--9633
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/Depictor/RDDepictor.h
> . . std::shared_ptr<RDKit::ROMol>

Underfull \hbox (badness 10000) in paragraph at lines 9630--9633
\T1/pcr/m/n/10 mol1( RDKit::SmilesToMol( "C1CCC1" ) ); RDDepict::compute2DCoord
s( *mol1 );

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9660.

[144]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9676.


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/DistGeomHelpers/Embed
der.h> #include <GraphMol/

Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 ForceFieldHelpers/MMFF/MMFF.h> . . std::shared_ptr<RDKit::ROMol>


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 mol2( RDKit::SmilesToMol( "C1CCC1" ) ); mol2->setProp( "_Name" ,


Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 "cyclobutane3D" ); RDKit::DGeomHelpers::EmbedMolecule( *mol2 );

Underfull \hbox (badness 10000) in paragraph at lines 9674--9678
\T1/pcr/m/n/10 RDKit::MMFF::MMFFOptimizeMolecule( *mol2 , 1000 , "MMFF94s" ); s
td::cout <<

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9702.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9710.


Underfull \hbox (badness 10000) in paragraph at lines 9710--9713
[]\TS1/cmr/b/n/10 ``[][]`[]\T1/ptm/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol
3( RD-Kit::MolOps::addHs( []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol2 ) ); RD-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9716.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9718--9730
\T1/ptm/m/n/10 am-ple4)](./C++Examples/example4.cpp): \TS1/cmtt/m/n/10 `\T1/pcr
/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol3sp(

Underfull \hbox (badness 10000) in paragraph at lines 9718--9730
\T1/pcr/m/n/10 RDKit::MolOps::addHs( *mol2 ) ); mol3sp->setProp( "_Name" , "cyc
lobutaneSP"

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 9737--9738
[]\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol5( RDKi
t::MolOps::removeHs( *mol3 );

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9745.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9754.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9761.


Underfull \hbox (badness 10000) in paragraph at lines 9768--9773
\T1/ptm/m/n/10 mol_supplier( sdf_file , take-Own-er-ship ); std::vector<std::sh
ared_ptr<RDKit::ROMol>> mols; while(
[145] [146]
Chapter 10.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9801.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9818.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9830.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9844.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9848.

[147] [148]
Chapter 11.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9860.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9884.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9888.

[149] [150]
Chapter 12.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9907.


Underfull \hbox (badness 10000) in paragraph at lines 9910--9912
[]\T1/ptm/m/n/10 const RD-Kit::Atom []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 atom = m
ol2->getAtomWithIdx( 2 ); for(const auto &nbri:

Underfull \hbox (badness 10000) in paragraph at lines 9914--9918
[]\T1/ptm/m/n/10 const RD-Kit::Bond []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 bond = (
[]\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol)[nbri]; un-signed int nbr_idx = bond-

Underfull \hbox (badness 10000) in paragraph at lines 9914--9918
\T1/ptm/m/n/10 >getOtherAtomIdx(atom->getIdx()); int nbr_atnum = bond->getOther
Atom(atom)-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9929.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9930.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9937.


Underfull \hbox (badness 6477) in paragraph at lines 9952--9954
[]\T1/ptm/m/n/10 const RD-Kit::Atom []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 atom = m
ol->getAtomWithIdx( i ); std::cout << mol->getRingInfo()-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9972.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9976.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9990.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 9993.

[151]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10018.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10021.

[152]
Chapter 13.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ std::shared_ptr<RDKit::ROMol> mol1( RDKit:
:SmilesToMol( "CCO" ) );

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 std::cout << "Number of atoms : " << mol1->getNumAtoms() << std:
:endl;

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 std::shared_ptr<RDKit::ROMol> mol2( RDKit::MolOps::addHs( *mol1 
) ); std::cout

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 mol3( new RDKit::RWMol( *mol2 ) ); RDKit::MolOps::removeHs( *mol
3 ); std::cout

Underfull \hbox (badness 10000) in paragraph at lines 10062--10090
\T1/pcr/m/n/10 << "Number of atoms : " << mol3->getNumAtoms() << std::endl; \TS
1/cmtt/m/n/10 ` \T1/ptm/m/n/10 which re-turns the

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10095.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10116.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10118.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10131.

[153]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
[]\T1/ptm/m/n/10 Bonds can be re-stored to the aro-matic bond type us-ing the \
T1/ptm/m/it/10 RD-Kit::MolOps::sanitizeMol \T1/ptm/m/n/10 func-

Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
\T1/ptm/m/n/10 tion: \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ RDKit::MolOps::saniti
zeMol( *mol ); std::cout << "Order : " <<

Underfull \hbox (badness 10000) in paragraph at lines 10133--10146
\T1/pcr/m/n/10 mol->getBondWithIdx( 0 )->getBondType() << std::endl; std::cout 
<< "Aromatic

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10166.


Underfull \hbox (badness 6220) in paragraph at lines 10149--10168
\T1/ptm/m/n/10 They are part of the RD-De-pict names-pace, is ac-cessed via the
 \T1/ptm/m/it/10 RD-De-pict::Compute2DCoords \T1/ptm/m/n/10 func-

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/ptm/m/n/10 tion [(ex-am-ple10.cpp)](./C++Examples/example10.cpp): \TS1/cmtt
/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/Depictor/

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/pcr/m/n/10 RDDepictor.h> . . std::shared_ptr<RDKit::RWMol>xs mol( new RDKit
::RWMol(

Underfull \hbox (badness 10000) in paragraph at lines 10149--10168
\T1/pcr/m/n/10 *RDKit::SmilesToMol( "c1nccc2n1ccc2" ) ) ); RDDepict::compute2DC
oords( *mol

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10179.


Underfull \hbox (badness 10000) in paragraph at lines 10178--10182
[]\T1/ptm/m/n/10 #endif []\TS1/cmr/b/n/10 ``[]\TS1/cmr/m/n/10 ` \T1/ptm/m/n/10 
The [CMake-Lists.txt](./C++Examples/CMakeLists.txt) with the ex-am-ples de-fine
s

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10205.

[154]
Chapter 14.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10290.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10306.


Underfull \hbox (badness 10000) in paragraph at lines 10301--10316
[]\T1/ptm/m/n/10 // new Riniker and Lan-drum CSD-based method // us-ing the pa-
ram-e-ters class RD-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
[]\T1/ptm/m/n/10 The RD-Kit also has an im-ple-men-ta-tion of the MMFF94 force 
field avail-able

Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
\T1/ptm/m/n/10 [[4]](#mmff1), [[5]](#mmff2), [[6]](#mmff3), [[7]](#mmff4), [[8]
](#mmffs). [(ex-am-

Underfull \hbox (badness 10000) in paragraph at lines 10317--10335
\T1/pcr/m/n/10 MMFF.h> . . RDKit::MMFF::MMFFOptimizeMolecule( *mol2 , 1000 , "M
MFF94s" ); \TS1/cmtt/m/n/10 `
[155]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10344.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10357.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10366.


Underfull \hbox (badness 6859) in paragraph at lines 10375--10379
[]\T1/ptm/m/n/10 static_cast<const std::vector<unsigned int> []\T1/ptm/b/n/10 *
[]\T1/ptm/m/n/10 >( 0 ) , &m2cids , static_cast<const RD-Nu-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10381.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10438.


Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 h> . . RDKit::ROMol *mol1 = RDKit::SmilesToMol( "c1ccncc1" ); st
d::string

Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 pickle; RDKit::MolPickler::pickleMol( *mol1 , pickle ); RDKit::R
OMol

Underfull \hbox (badness 10000) in paragraph at lines 10418--10443
\T1/pcr/m/n/10 mol2; RDKit::MolPickler::molFromPickle( pickle , mol2 ); std::co
ut <<
[156]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 6842) in paragraph at lines 10483--10493
[]\T1/ptm/m/n/10 } pickle_istream.close(); std::cout << ^^PRead ^^Q << read_cnt
 << ^^Q molecules.^^Q << std::endl; \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 By

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 default, the pickling process does not preserve any properties a
ttached

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 to the molecule, which includes the molecule name (property "_Na
me"). This

Underfull \hbox (badness 10000) in paragraph at lines 10483--10493
\T1/pcr/m/n/10 can be forced: \TS1/cmtt/m/n/10 ```\T1/pcr/m/n/10 c++ RDKit::Mol
Pickler::pickleMol( *mol , pickle_ostream,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 <GraphMol/MolDraw2D/MolDraw2DSVG.h> . . RDKit::SDMolSupplier mol
_supplier(

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 "data/cdk2.sdf" , true ); RDKit::ROMol *mol1 = mol_supplier.next
();

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 RDDepict::compute2DCoords( *mol1 ); std::ofstream outs("cdk_mol1
.svg");

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 RDKit::MolDraw2DSVG svg_drawer(300, 300, outs); svg_drawer.drawM
olecule(

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 *mol1 ); svg_drawer.finishDrawing(); outs.close(); \TS1/cmtt/m/n
/10 ` \T1/ptm/m/n/10 The pro-ce-dure for a PNG is

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/ptm/m/n/10 slightly dif-fer-ent: [(ex-am-ple13.cpp)](./C++Examples/example1
3.cpp): \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ #include <GraphMol/

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 MolDraw2D/MolDraw2DSVG.h> . . RDKit::MolDraw2DCairo cairo_drawer
(300, 300);

Underfull \hbox (badness 10000) in paragraph at lines 10494--10532
\T1/pcr/m/n/10 cairo_drawer.drawMolecule(*mol1); cairo_drawer.finishDrawing(); 
cairo_drawer.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10534.


Underfull \hbox (badness 10000) in paragraph at lines 10544--10552
[]\T1/ptm/m/n/10 } Mol-Draw2DSVG drawer(750, 400, 250, 200); drawer.drawMolecul
es(mols);
[157]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10556.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 7777) in paragraph at lines 10558--10582
\T1/ptm/m/n/10 have matched a sub-struc-ture query [(ex-am-ple17.cpp)](./C++Exa
mples/example17.cpp): \TS1/cmtt/m/n/10 `\T1/pcr/m/n/10 c++ drawer.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 std::map<int, DrawColour> atom_cols; atom_cols.insert(std::make_
pair(13,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 DrawColour(1.0, 0.0, 0.0))); atom_cols.insert(std::make_pair(14,
 DrawColour(0.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 0, 1.0, 0.0))); atom_cols.insert(std::make_pair(15, DrawColour(0
.0, 0.0,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 1.0))); atom_cols.insert(std::make_pair(16, DrawColour(1.0, 0.55
, 0.0)));

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 std::map<int, DrawColour> bond_cols; bond_cols.insert(std::make_
pair(13,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 DrawColour(0.8, 0.8, 0.0))); bond_cols.insert(std::make_pair(14,
 DrawColour(0.

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 0, 1.0, 1.0))); bond_cols.insert(std::make_pair(15, DrawColour(1
.0, 0.0,

Underfull \hbox (badness 10000) in paragraph at lines 10558--10582
\T1/pcr/m/n/10 1.0))); drawer.drawMolecule(*mol, &hit1_atoms, &hit1_bonds, &ato
m_cols,

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10600.


Underfull \hbox (badness 10000) in paragraph at lines 10600--10613
\T1/ptm/m/n/10 >setProp(common_properties::bondNote, ^^Pbar^^Q); drawer.drawOpt
ions().addAtomIndices

Underfull \hbox (badness 10000) in paragraph at lines 10600--10613
\T1/ptm/m/n/10 = true; drawer.drawOptions().addStereoAnnotation = true; drawer.
drawMolecule([]\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 m1);

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10617.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10624.


Underfull \hbox (badness 10000) in paragraph at lines 10621--10632
[]\T1/ptm/m/n/10 Substructure match-ing can be done us-ing query molecules buil
t from SMARTS. [(ex-am-

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10654.


Underfull \hbox (badness 10000) in paragraph at lines 10644--10658
\T1/pcr/m/n/10 match, and replaces the contents of \TS1/cmtt/m/n/10 `\T1/pcr/m/
n/10 res\TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 with a mapping of the atom indices

Underfull \hbox (badness 10000) in paragraph at lines 10644--10658
\T1/pcr/m/n/10 in the pattern and a set of atoms that match in the molecule. In
 the above

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10661.

[158] [159] [160]
Chapter 15.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10689.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10693.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10696.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10720.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10726.


Underfull \hbox (badness 6001) in paragraph at lines 10723--10730
[]\T1/ptm/m/n/10 Substructure match-ing can also be done us-ing molecules built
 from SMILES in-stead of SMARTS:
[161] [162]
Chapter 16.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10759.


Underfull \hbox (badness 10000) in paragraph at lines 10756--10763
\T1/ptm/m/n/10 But don't for-get that the se-man-tics of the two lan-guages are
 not ex-actly equiv-a-lent: [(ex-am-

Underfull \hbox (badness 10000) in paragraph at lines 10756--10763
\T1/ptm/m/n/10 ple14.cpp)](./C++Examples/example14.cpp): []\TS1/cmr/b/n/10 ``[]
[]`[]\T1/ptm/m/n/10 c++ RD-Kit::ROMol []\T1/ptm/b/n/10 *[]\T1/ptm/m/n/10 mol4 =
 RD-Kit::SmilesToMol(
[163] [164]
Chapter 17.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10814.

[165] [166]
Chapter 18.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10862.

[167] [168]
Chapter 19.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10916.


Underfull \hbox (badness 10000) in paragraph at lines 10906--10920
\T1/ptm/m/n/10 gives \TS1/cmtt/m/n/10 ` \T1/pcr/m/n/10 SMARTS 1 chiral match No
t SMARTS 2 chiral match SMARTS 3 chiral match \TS1/cmtt/m/n/10 `
[169] [170]
Chapter 20.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 10971.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11008.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family ptm in TS1 encoding.
(textcomp)                Default family used instead on input line 11012.

[171] [172]
Chapter 21.

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.

[173] [174]
Chapter 22.
[175] [176]
Chapter 23.
(./RDKit.ind) [177] (./RDKit.aux) )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tcti1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc} </tmp/texfonts/pk/ljfour/jknappen/ec/tcrm1000.600pk> </tmp/texfonts/pk/l
jfour/jknappen/ec/tctt1000.600pk> </tmp/texfonts/pk/ljfour/jknappen/ec/tcrb1000
.600pk> </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk></usr/share/texlive
/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-
dist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fo
nts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw
/courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr
o8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></us
r/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></usr/share/tex
live/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1
/urw/times/utmbi8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utm
r8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>
Output written on RDKit.pdf (183 pages, 1467901 bytes).
Transcript written on RDKit.log.
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Log file says output to 'RDKit.pdf'
Latexmk: Examining 'RDKit.log'
=== TeX engine is 'pdfTeX'
Latexmk: All targets (RDKit.pdf) are up-to-date
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book/_build/latex'
pdflatex finished; the PDF files are in _build/latex.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp -r rdkit obj-*/
find /<<PKGBUILDDIR>> -name rdchem.so
/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/rdchem.so
#export RDBASE=/<<PKGBUILDDIR>> PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:"
PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//rdkit/Chem/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:" dh_auto_test
dh_auto_test: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
        Start   1: testCoordGen
        Start   2: pyCoordGen
        Start   3: testDict
        Start   4: testRDValue
  1/162 Test   #4: testRDValue ............................   Passed    0.19 sec
        Start   5: testDataStructs
  2/162 Test   #5: testDataStructs ........................   Passed    0.16 sec
        Start   6: testFPB
  3/162 Test   #6: testFPB ................................   Passed    0.09 sec
        Start   7: testMultiFPB
  4/162 Test   #7: testMultiFPB ...........................   Passed    0.19 sec
        Start   8: pyBV
  5/162 Test   #2: pyCoordGen .............................   Passed    4.33 sec
        Start   9: pyDiscreteValueVect
  6/162 Test   #1: testCoordGen ...........................   Passed    4.69 sec
        Start  10: pySparseIntVect
  7/162 Test   #9: pyDiscreteValueVect ....................   Passed    1.59 sec
        Start  11: pyFPB
  8/162 Test  #10: pySparseIntVect ........................   Passed    1.59 sec
        Start  12: testTransforms
  9/162 Test  #12: testTransforms .........................   Passed    0.05 sec
        Start  13: testGrid
 10/162 Test  #13: testGrid ...............................   Passed    0.47 sec
        Start  14: geometryTestsCatch
 11/162 Test  #14: geometryTestsCatch .....................   Passed    0.11 sec
        Start  15: testPyGeometry
 12/162 Test  #11: pyFPB ..................................   Passed    1.74 sec
        Start  16: testMatrices
 13/162 Test  #16: testMatrices ...........................   Passed    0.04 sec
        Start  17: testConrec
 14/162 Test  #17: testConrec .............................   Passed    0.33 sec
        Start  18: testAlignment
 15/162 Test  #18: testAlignment ..........................   Passed    0.06 sec
        Start  19: pyAlignment
 16/162 Test   #8: pyBV ...................................   Passed    7.87 sec
        Start  20: testOptimizer
 17/162 Test  #20: testOptimizer ..........................   Passed    0.04 sec
        Start  21: testUFFForceField
 18/162 Test  #15: testPyGeometry .........................   Passed    2.11 sec
        Start  22: testMMFFForceField
 19/162 Test  #21: testUFFForceField ......................   Passed    0.70 sec
        Start  23: pyForceFieldConstraints
 20/162 Test  #19: pyAlignment ............................   Passed    1.81 sec
        Start  24: testDistGeom
 21/162 Test  #24: testDistGeom ...........................   Passed    0.13 sec
        Start  25: pyDistGeom
 22/162 Test  #25: pyDistGeom .............................   Passed    1.69 sec
        Start  26: graphmolTest1
 23/162 Test   #3: testDict ...............................   Passed   12.11 sec
        Start  27: graphmolcpTest
 24/162 Test  #27: graphmolcpTest .........................   Passed    0.15 sec
        Start  28: graphmolqueryTest
 25/162 Test  #28: graphmolqueryTest ......................   Passed    0.20 sec
        Start  29: graphmolMolOpsTest
 26/162 Test  #23: pyForceFieldConstraints ................   Passed    3.80 sec
        Start  30: graphmoltestChirality
 27/162 Test  #30: graphmoltestChirality ..................   Passed    0.66 sec
        Start  31: graphmoltestPickler
 28/162 Test  #31: graphmoltestPickler ....................   Passed    2.52 sec
        Start  32: graphmoltestPicklerGlobalSetting
 29/162 Test  #32: graphmoltestPicklerGlobalSetting .......   Passed    0.22 sec
        Start  33: graphmolIterTest
 30/162 Test  #33: graphmolIterTest .......................   Passed    0.16 sec
        Start  34: hanoiTest
 31/162 Test  #29: graphmolMolOpsTest .....................   Passed   14.21 sec
        Start  35: graphmolMemTest1
 32/162 Test  #35: graphmolMemTest1 .......................   Passed    0.28 sec
        Start  36: resMolSupplierTest
 33/162 Test  #36: resMolSupplierTest .....................   Passed    4.59 sec
        Start  37: molBundleTest
 34/162 Test  #37: molBundleTest ..........................   Passed    0.20 sec
        Start  38: testSGroup
 35/162 Test  #38: testSGroup .............................   Passed    0.27 sec
        Start  39: test-valgrind
 36/162 Test  #39: test-valgrind ..........................   Passed    0.18 sec
        Start  40: graphmolTestsCatch
 37/162 Test  #40: graphmolTestsCatch .....................   Passed    0.38 sec
        Start  41: graphmolSGroupCatch
 38/162 Test  #41: graphmolSGroupCatch ....................   Passed    0.15 sec
        Start  42: testDepictor
 39/162 Test  #42: testDepictor ...........................   Passed    2.12 sec
        Start  43: pyDepictor
 40/162 Test  #43: pyDepictor .............................   Passed    3.80 sec
        Start  44: smiTest1
 41/162 Test  #44: smiTest1 ...............................   Passed    1.65 sec
        Start  45: smiTest2
 42/162 Test  #45: smiTest2 ...............................   Passed    0.11 sec
        Start  46: cxsmilesTest
 43/162 Test  #46: cxsmilesTest ...........................   Passed    0.18 sec
        Start  47: smaTest1
 44/162 Test  #47: smaTest1 ...............................   Passed    1.27 sec
        Start  48: smiTestCatch
 45/162 Test  #48: smiTestCatch ...........................   Passed    0.37 sec
        Start  49: fileParsersTest1
 46/162 Test  #49: fileParsersTest1 .......................   Passed  131.47 sec
        Start  50: testMolSupplier
 47/162 Test  #50: testMolSupplier ........................   Passed    4.54 sec
        Start  51: testMolWriter
 48/162 Test  #51: testMolWriter ..........................   Passed    2.92 sec
        Start  52: testTplParser
 49/162 Test  #52: testTplParser ..........................   Passed    0.41 sec
        Start  53: testMol2ToMol
 50/162 Test  #53: testMol2ToMol ..........................   Passed    0.59 sec
        Start  54: testSequence
 51/162 Test  #54: testSequence ...........................   Passed    0.62 sec
        Start  55: testExtendedStereoParsing
 52/162 Test  #55: testExtendedStereoParsing ..............   Passed    0.38 sec
        Start  56: fileParsersCatchTest
 53/162 Test  #56: fileParsersCatchTest ...................   Passed    0.52 sec
        Start  57: testPropertyLists
 54/162 Test  #57: testPropertyLists ......................   Passed    0.32 sec
        Start  58: testSubstructMatch
 55/162 Test  #58: testSubstructMatch .....................   Passed    4.13 sec
        Start  59: substructTestCatch
 56/162 Test  #59: substructTestCatch .....................   Passed    0.46 sec
        Start  60: testReaction
 57/162 Test  #60: testReaction ...........................   Passed    5.40 sec
        Start  61: testReactionFingerprints
 58/162 Test  #61: testReactionFingerprints ...............   Passed    0.42 sec
        Start  62: testEnumeration
 59/162 Test  #22: testMMFFForceField .....................   Passed  192.96 sec
        Start  63: rxnTestCatch
 60/162 Test  #63: rxnTestCatch ...........................   Passed    0.59 sec
        Start  64: pyChemReactions
 61/162 Test  #64: pyChemReactions ........................   Passed    6.56 sec
        Start  65: pyChemReactionEnumerations
 62/162 Test  #34: hanoiTest ..............................   Passed  228.04 sec
        Start  66: pyChemReactionSanitize
 63/162 Test  #66: pyChemReactionSanitize .................   Passed   17.66 sec
        Start  67: testChemTransforms
 64/162 Test  #67: testChemTransforms .....................   Passed    1.15 sec
        Start  68: chemTransformsTestCatch
 65/162 Test  #68: chemTransformsTestCatch ................   Passed    0.56 sec
        Start  69: testSubgraphs1
 66/162 Test  #65: pyChemReactionEnumerations .............   Passed   70.45 sec
        Start  70: testSubgraphs2
 67/162 Test  #70: testSubgraphs2 .........................   Passed    0.45 sec
        Start  71: filterCatalogTest
 68/162 Test  #69: testSubgraphs1 .........................   Passed    2.55 sec
        Start  72: pyFilterCatalog
 69/162 Test  #71: filterCatalogTest ......................   Passed    1.75 sec
        Start  73: testFragCatalog
 70/162 Test  #73: testFragCatalog ........................   Passed    6.92 sec
        Start  74: pyFragCatalog
 71/162 Test  #72: pyFilterCatalog ........................   Passed   10.61 sec
        Start  75: testDescriptors
 72/162 Test  #74: pyFragCatalog ..........................   Passed    3.62 sec
        Start  76: testAUTOCORR2D
 73/162 Test  #76: testAUTOCORR2D .........................   Passed    4.43 sec
        Start  77: testATF
 74/162 Test  #77: testATF ................................   Passed    0.40 sec
        Start  78: pyMolDescriptors
 75/162 Test  #78: pyMolDescriptors .......................***Failed    5.75 sec
....ss...........E.......E..
======================================================================
ERROR: testPairValues (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/testMolDescriptors.py", line 357, in testPairValues
    pkl = base64.decodestring(txt)
AttributeError: module 'base64' has no attribute 'decodestring'

======================================================================
ERROR: testTorsionValues (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/testMolDescriptors.py", line 372, in testTorsionValues
    pkl = base64.decodestring(txt)
AttributeError: module 'base64' has no attribute 'decodestring'

----------------------------------------------------------------------
Ran 28 tests in 0.482s

FAILED (errors=2, skipped=2)
exactmw 78.046950192
lipinskiHBA 0.0
lipinskiHBD 0.0
NumRotatableBonds 0.0
NumHBD 0.0
NumHBA 0.0
NumHeteroatoms 0.0
NumAmideBonds 0.0
FractionCSP3 0.0
NumRings 1.0
NumAromaticRings 1.0
NumAliphaticRings 0.0
NumSaturatedRings 0.0
NumHeterocycles 0.0
NumAromaticHeterocycles 0.0
NumSaturatedHeterocycles 0.0
NumAliphaticHeterocycles 0.0
NumSpiroAtoms 0.0
NumBridgeheadAtoms 0.0
NumAtomStereoCenters 0.0
NumUnspecifiedAtomStereoCenters 0.0
labuteASA 37.43140311949697
tpsa 0.0
CrippenClogP 1.6866
CrippenMR 26.441999999999993
NumAtoms 6.0
exactmw 78.046950192
lipinskiHBA 0.0

        Start  79: pyMolDescriptors3D
 76/162 Test  #79: pyMolDescriptors3D .....................   Passed    3.84 sec
        Start  80: testFingerprints
 77/162 Test  #75: testDescriptors ........................   Passed   29.08 sec
        Start  81: testMHFPFingerprint
 78/162 Test  #81: testMHFPFingerprint ....................   Passed    0.94 sec
        Start  82: testFingerprintGenerators
 79/162 Test  #82: testFingerprintGenerators ..............   Passed   26.96 sec
        Start  83: fpTestCatch
 80/162 Test  #83: fpTestCatch ............................   Passed    6.07 sec
        Start  84: pyTestGenerator
 81/162 Test  #80: testFingerprints .......................   Passed   52.57 sec
        Start  85: pyTestMHFP
 82/162 Test  #85: pyTestMHFP .............................   Passed   18.34 sec
        Start  86: testPartialCharges
 83/162 Test  #84: pyTestGenerator ........................   Passed   19.56 sec
        Start  87: pyPartialCharges
 84/162 Test  #86: testPartialCharges .....................   Passed    0.69 sec
        Start  88: testMolTransforms
 85/162 Test  #88: testMolTransforms ......................   Passed    1.56 sec
        Start  89: pyMolTransforms
 86/162 Test  #89: pyMolTransforms ........................   Passed    3.00 sec
        Start  90: testMMFFForceFieldHelpers
 87/162 Test  #87: pyPartialCharges .......................   Passed    5.62 sec
        Start  91: testMMFFForceFieldHelpersMultiThread
 88/162 Test  #91: testMMFFForceFieldHelpersMultiThread ...   Passed    4.03 sec
        Start  92: testUFFForceFieldHelpers
 89/162 Test  #90: testMMFFForceFieldHelpers ..............   Passed   78.67 sec
        Start  93: testCrystalForceField
 90/162 Test  #93: testCrystalForceField ..................   Passed    1.71 sec
        Start  94: pyForceFieldHelpers
 91/162 Test  #94: pyForceFieldHelpers ....................   Passed    5.69 sec
        Start  95: testDistGeomHelpers
 92/162 Test  #92: testUFFForceFieldHelpers ...............   Passed   82.38 sec
        Start  96: pyDistGeomHelpers
 93/162 Test  #62: testEnumeration ........................   Passed  293.00 sec
        Start  97: testMolAlign
 94/162 Test  #26: graphmolTest1 ..........................   Passed  720.29 sec
        Start  98: pyMolAlign
 95/162 Test  #96: pyDistGeomHelpers ......................   Passed  339.74 sec
        Start  99: testFeatures
 96/162 Test  #99: testFeatures ...........................   Passed    0.46 sec
        Start 100: pyChemicalFeatures
 97/162 Test #100: pyChemicalFeatures .....................   Passed    5.29 sec
        Start 101: testShapeHelpers
 98/162 Test #101: testShapeHelpers .......................   Passed    0.52 sec
        Start 102: pyShapeHelpers
 99/162 Test #102: pyShapeHelpers .........................   Passed    7.40 sec
        Start 103: testMolCatalog
100/162 Test #103: testMolCatalog .........................   Passed    0.75 sec
        Start 104: pyMolCatalog
101/162 Test  #97: testMolAlign ...........................   Passed  339.73 sec
        Start 105: moldraw2DTest1
102/162 Test #104: pyMolCatalog ...........................   Passed    4.06 sec
        Start 106: moldraw2DTestCatch
103/162 Test #106: moldraw2DTestCatch .....................   Passed    2.04 sec
        Start 107: moldraw2DRxnTest1
104/162 Test #107: moldraw2DRxnTest1 ......................   Passed    1.28 sec
        Start 108: pyMolDraw2D
105/162 Test #108: pyMolDraw2D ............................   Passed    9.25 sec
        Start 109: testFMCS
106/162 Test #105: moldraw2DTest1 .........................   Passed   29.97 sec
        Start 110: pyFMCS
107/162 Test #109: testFMCS ...............................   Passed   21.05 sec
        Start 111: FMCStest
108/162 Test #111: FMCStest ...............................   Passed    0.20 sec
        Start 112: testMolHash
109/162 Test #112: testMolHash ............................   Passed    0.55 sec
        Start 113: molHashCatchTest
110/162 Test #113: molHashCatchTest .......................   Passed    0.34 sec
        Start 114: pyMolHash
111/162 Test  #98: pyMolAlign .............................   Passed  133.52 sec
        Start 115: testMMPA
112/162 Test #114: pyMolHash ..............................   Passed    2.22 sec
        Start 116: pyMMPA
113/162 Test #115: testMMPA ...............................   Passed    0.97 sec
        Start 117: testReducedGraphs
114/162 Test #117: testReducedGraphs ......................   Passed    0.44 sec
        Start 118: pyReducedGraphs
115/162 Test #118: pyReducedGraphs ........................   Passed    2.22 sec
        Start 119: trajectoryTest
116/162 Test #119: trajectoryTest .........................   Passed    3.53 sec
        Start 120: substructLibraryTest
117/162 Test #110: pyFMCS .................................   Passed   17.57 sec
        Start 121: pySubstructLibrary
118/162 Test #116: pyMMPA .................................   Passed   14.43 sec
        Start 122: testRGroupDecomp
119/162 Test #120: substructLibraryTest ...................   Passed    7.77 sec
        Start 123: pyRGroupDecomposition
120/162 Test #122: testRGroupDecomp .......................   Passed    3.72 sec
        Start 124: molInterchangeTest1
121/162 Test #124: molInterchangeTest1 ....................   Passed    0.39 sec
        Start 125: pyMolInterchange
122/162 Test #123: pyRGroupDecomposition ..................   Passed    5.15 sec
        Start 126: testSLNParse
123/162 Test #126: testSLNParse ...........................   Passed    0.36 sec
        Start 127: pySLNParse
124/162 Test #125: pyMolInterchange .......................   Passed    2.89 sec
        Start 128: pyGraphMolWrap
125/162 Test #127: pySLNParse .............................   Passed    2.82 sec
        Start 129: pyTestConformerWrap
126/162 Test #129: pyTestConformerWrap ....................   Passed    2.56 sec
        Start 130: pyTestTrajectory
127/162 Test #130: pyTestTrajectory .......................   Passed    7.20 sec
        Start 131: pyTestSGroups
128/162 Test #121: pySubstructLibrary .....................   Passed   25.94 sec
        Start 132: pyTestThreads
129/162 Test #131: pyTestSGroups ..........................   Passed    2.86 sec
        Start 133: pyTestPropertyLists
130/162 Test #132: pyTestThreads ..........................   Passed    3.29 sec
        Start 134: molStandardizeTest
131/162 Test #133: pyTestPropertyLists ....................   Passed    2.90 sec
        Start 135: molNormalizeTest
132/162 Test #134: molStandardizeTest .....................   Passed    1.25 sec
        Start 136: molValidateTest
133/162 Test #135: molNormalizeTest .......................   Passed    1.14 sec
        Start 137: molChargeTest
134/162 Test #136: molValidateTest ........................   Passed    0.51 sec
        Start 138: molTautomerTest
135/162 Test #137: molChargeTest ..........................   Passed    0.96 sec
        Start 139: molStandardizeSmallTest
136/162 Test #139: molStandardizeSmallTest ................   Passed    0.43 sec
        Start 140: molFragmentTest
137/162 Test #140: molFragmentTest ........................   Passed    0.63 sec
        Start 141: molStandardizeCatchTest
138/162 Test #141: molStandardizeCatchTest ................   Passed    0.74 sec
        Start 142: pyMolStandardize
139/162 Test #142: pyMolStandardize .......................   Passed    4.20 sec
        Start 143: testScaffoldNetwork
140/162 Test #138: molTautomerTest ........................   Passed   13.09 sec
        Start 144: pyScaffoldNetwork
141/162 Test #143: testScaffoldNetwork ....................   Passed    8.34 sec
        Start 145: pyScaffoldNetworkPickling
142/162 Test #144: pyScaffoldNetwork ......................   Passed    2.89 sec
        Start 146: testQuery
143/162 Test #146: testQuery ..............................   Passed    0.06 sec
        Start 147: testMatCalc
144/162 Test #147: testMatCalc ............................   Passed    0.04 sec
        Start 148: pyMatCalc
145/162 Test #145: pyScaffoldNetworkPickling ..............   Passed    2.14 sec
        Start 149: testSimDivPickers
146/162 Test #149: testSimDivPickers ......................   Passed    0.14 sec
        Start 150: pickersTestsCatch
147/162 Test #150: pickersTestsCatch ......................   Passed    0.98 sec
        Start 151: pySimDivPickers
148/162 Test #148: pyMatCalc ..............................   Passed    5.48 sec
        Start 152: pyRanker
149/162 Test #152: pyRanker ...............................   Passed    2.54 sec
        Start 153: testChemicalFeatures
150/162 Test #153: testChemicalFeatures ...................   Passed    0.07 sec
        Start 154: pyFeatures
151/162 Test #154: pyFeatures .............................   Passed    2.38 sec
        Start 155: pythonTestDbCLI
152/162 Test #151: pySimDivPickers ........................   Passed   14.10 sec
        Start 156: pythonTestDirML
153/162 Test #128: pyGraphMolWrap .........................   Passed   83.26 sec
        Start 157: pythonTestDirDataStructs
154/162 Test #157: pythonTestDirDataStructs ...............   Passed   10.70 sec
        Start 158: pythonTestDirDbase
155/162 Test #158: pythonTestDirDbase .....................   Passed   13.00 sec
        Start 159: pythonTestDirSimDivFilters
156/162 Test #159: pythonTestDirSimDivFilters .............   Passed    2.81 sec
        Start 160: pythonTestDirVLib
157/162 Test #160: pythonTestDirVLib ......................   Passed    6.06 sec
        Start 161: pythonTestDirChem
158/162 Test #156: pythonTestDirML ........................   Passed  144.95 sec
        Start 162: pythonTestSping
159/162 Test #162: pythonTestSping ........................   Passed    6.57 sec
160/162 Test  #95: testDistGeomHelpers ....................   Passed  636.18 sec
161/162 Test #155: pythonTestDbCLI ........................   Passed  186.49 sec
162/162 Test #161: pythonTestDirChem ......................***Failed  769.83 sec
......
----------------------------------------------------------------------
Ran 6 tests in 1.195s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.336s

OK
....[05:43:16] 

****
Pre-condition Violation
valence not defined for atoms not associated with molecules
Violation occurred on line 310 in file /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp
Failed Expression: dp_mol
****

.
----------------------------------------------------------------------
Ran 5 tests in 0.110s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.103s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.239s

OK
......................
----------------------------------------------------------------------
Ran 22 tests in 0.369s

OK
.....s.................ss
----------------------------------------------------------------------
Ran 25 tests in 1.521s

OK (skipped=3)
..s
----------------------------------------------------------------------
Ran 3 tests in 2.081s

OK (skipped=1)
...................................
----------------------------------------------------------------------
Ran 35 tests in 1.357s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.196s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.176s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.379s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.737s

OK
.ss.ss.......
----------------------------------------------------------------------
Ran 13 tests in 13.255s

OK (skipped=4)
.........F......[05:47:41] WARNING: More than one matching pattern found - picking one
[05:47:41] WARNING: More than one matching pattern found - picking one
.[05:47:42] WARNING: More than one matching pattern found - picking one
..
======================================================================
FAIL: testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/<<PKGBUILDDIR>>/rdkit/Chem/UnitTestMol3D.py", line 218, in testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable
    self.assertEqual(smiles, expected)
AssertionError: Items in the first set but not the second:
'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@@H](N)I'
Items in the second set but not the first:
'C/C(F)=C/[C@H](Cl)/C=C(\\Br)[C@H](N)I'

----------------------------------------------------------------------
Ran 19 tests in 209.772s

FAILED (failures=1)
........
----------------------------------------------------------------------
Ran 8 tests in 0.866s

OK
....[05:48:09] WARNING: not removing hydrogen atom without neighbors
[05:48:09] WARNING: not removing hydrogen atom without neighbors
[05:48:09] WARNING: not removing hydrogen atom without neighbors
.......
----------------------------------------------------------------------
Ran 11 tests in 22.292s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 9.758s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 2.838s

OK
.......[05:49:00] WARNING: not removing hydrogen atom with dummy atom neighbors
[05:49:00] WARNING: not removing hydrogen atom with dummy atom neighbors
....[05:49:04] WARNING: not removing hydrogen atom with dummy atom neighbors
[05:49:04] WARNING: not removing hydrogen atom with dummy atom neighbors
[05:49:04] WARNING: not removing hydrogen atom with dummy atom neighbors
[05:49:04] WARNING: not removing hydrogen atom with dummy atom neighbors
...s..s........
----------------------------------------------------------------------
Ran 26 tests in 30.549s

OK (skipped=2)
F............/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/BRICS.py:291: DeprecationWarning: The *random* parameter to shuffle() has been deprecated
since Python 3.9 and will be removed in a subsequent version.
  random.shuffle(indices, random=random.random)
/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/BRICS.py:299: DeprecationWarning: The *random* parameter to shuffle() has been deprecated
since Python 3.9 and will be removed in a subsequent version.
  random.shuffle(compats, random=random.random)
.[05:50:38] WARNING: More than one matching pattern found - picking one
[05:50:38] WARNING: More than one matching pattern found - picking one
...........
======================================================================
FAIL: EnumerateStereoisomers (rdkit.Chem.EnumerateStereoisomers)
Doctest: rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python3.9/doctest.py", line 2204, in runTest
    raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
  File "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/EnumerateStereoisomers.py", line 164, in EnumerateStereoisomers

----------------------------------------------------------------------
File "/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/EnumerateStereoisomers.py", line 286, in rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
Failed example:
    for smi in sorted(Chem.MolToSmiles(x, isomericSmiles=True) for x in isomers):
        print(smi)
Expected:
    F[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
Got:
    F[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)Br


----------------------------------------------------------------------
Ran 25 tests in 90.758s

FAILED (failures=1)
..
----------------------------------------------------------------------
Ran 2 tests in 0.389s

OK
..s...
----------------------------------------------------------------------
Ran 6 tests in 6.189s

OK (skipped=1)
.[05:50:52] WARNING: not removing hydrogen atom without neighbors
.[05:50:52] WARNING: not removing hydrogen atom without neighbors
.[05:50:52] WARNING: no name column found on line 1
[05:50:52] WARNING: no name column found on line 2
[05:50:52] WARNING: no name column found on line 3
[05:50:52] WARNING: no name column found on line 4
[05:50:52] WARNING: no name column found on line 5
[05:50:52] WARNING: no name column found on line 6
[05:50:52] WARNING: no name column found on line 7
[05:50:52] WARNING: no name column found on line 8
[05:50:52] WARNING: no name column found on line 9
[05:50:52] WARNING: no name column found on line 10
[05:50:52] WARNING: no name column found on line 11
[05:50:52] WARNING: no name column found on line 12
[05:50:52] WARNING: no name column found on line 13
[05:50:52] WARNING: no name column found on line 14
[05:50:52] WARNING: no name column found on line 15
[05:50:52] WARNING: no name column found on line 16
[05:50:52] WARNING: no name column found on line 17
[05:50:52] WARNING: no name column found on line 18
[05:50:52] WARNING: no name column found on line 19
[05:50:52] WARNING: no name column found on line 20
[05:50:52] WARNING: no name column found on line 21
[05:50:52] WARNING: no name column found on line 22
[05:50:52] WARNING: no name column found on line 23
[05:50:52] WARNING: no name column found on line 24
[05:50:52] WARNING: no name column found on line 25
[05:50:52] WARNING: no name column found on line 26
[05:50:52] WARNING: no name column found on line 27
[05:50:52] WARNING: no name column found on line 28
[05:50:52] WARNING: no name column found on line 29
[05:50:52] WARNING: no name column found on line 30
[05:50:52] WARNING: no name column found on line 31
[05:50:52] WARNING: no name column found on line 32
[05:50:52] WARNING: no name column found on line 33
[05:50:52] WARNING: no name column found on line 34
[05:50:52] WARNING: no name column found on line 35
[05:50:52] WARNING: no name column found on line 36
[05:50:52] WARNING: no name column found on line 37
[05:50:52] WARNING: no name column found on line 38
[05:50:52] WARNING: no name column found on line 39
[05:50:52] WARNING: no name column found on line 40
[05:50:52] WARNING: no name column found on line 41
[05:50:52] WARNING: no name column found on line 42
[05:50:52] WARNING: no name column found on line 43
[05:50:52] WARNING: no name column found on line 44
[05:50:52] WARNING: no name column found on line 45
[05:50:52] WARNING: no name column found on line 46
[05:50:52] WARNING: no name column found on line 47
[05:50:52] WARNING: no name column found on line 48
[05:50:52] WARNING: no name column found on line 49
[05:50:52] WARNING: no name column found on line 50
[05:50:52] WARNING: no name column found on line 51
[05:50:52] WARNING: no name column found on line 52
[05:50:52] WARNING: no name column found on line 53
[05:50:52] WARNING: no name column found on line 54
[05:50:52] WARNING: no name column found on line 55
[05:50:52] WARNING: no name column found on line 56
[05:50:52] WARNING: no name column found on line 57
[05:50:52] WARNING: no name column found on line 58
[05:50:52] WARNING: no name column found on line 59
[05:50:52] WARNING: no name column found on line 60
[05:50:52] WARNING: no name column found on line 61
[05:50:52] WARNING: no name column found on line 62
[05:50:52] WARNING: no name column found on line 63
[05:50:52] WARNING: no name column found on line 64
[05:50:52] WARNING: no name column found on line 65
[05:50:52] WARNING: no name column found on line 66
[05:50:52] WARNING: no name column found on line 67
[05:50:52] WARNING: no name column found on line 68
[05:50:52] WARNING: no name column found on line 69
[05:50:52] WARNING: no name column found on line 70
[05:50:52] WARNING: no name column found on line 71
[05:50:52] WARNING: no name column found on line 72
[05:50:52] WARNING: no name column found on line 73
[05:50:52] WARNING: no name column found on line 74
[05:50:52] WARNING: no name column found on line 75
[05:50:52] WARNING: no name column found on line 76
[05:50:52] WARNING: no name column found on line 77
[05:50:52] WARNING: no name column found on line 78
[05:50:52] WARNING: no name column found on line 79
[05:50:52] WARNING: no name column found on line 80
[05:50:52] WARNING: no name column found on line 81
[05:50:52] WARNING: no name column found on line 82
[05:50:52] WARNING: no name column found on line 83
[05:50:52] WARNING: no name column found on line 84
[05:50:52] WARNING: no name column found on line 85
[05:50:52] WARNING: no name column found on line 86
[05:50:52] WARNING: no name column found on line 87
[05:50:52] WARNING: no name column found on line 88
[05:50:52] WARNING: no name column found on line 89
[05:50:52] WARNING: no name column found on line 90
[05:50:52] WARNING: no name column found on line 91
[05:50:52] WARNING: no name column found on line 92
[05:50:52] WARNING: no name column found on line 93
[05:50:52] WARNING: no name column found on line 94
[05:50:52] WARNING: no name column found on line 95
[05:50:52] WARNING: no name column found on line 96
[05:50:52] WARNING: no name column found on line 97
[05:50:52] WARNING: no name column found on line 98
[05:50:52] WARNING: no name column found on line 99
[05:50:52] WARNING: no name column found on line 100
[05:50:52] WARNING: no name column found on line 101
[05:50:52] WARNING: no name column found on line 102
[05:50:52] WARNING: no name column found on line 103
[05:50:52] WARNING: no name column found on line 104
[05:50:52] WARNING: no name column found on line 105
[05:50:52] WARNING: no name column found on line 106
[05:50:52] WARNING: no name column found on line 107
[05:50:52] WARNING: no name column found on line 108
[05:50:52] WARNING: no name column found on line 109
[05:50:52] WARNING: no name column found on line 110
[05:50:52] WARNING: no name column found on line 111
[05:50:52] WARNING: no name column found on line 112
[05:50:52] WARNING: no name column found on line 113
[05:50:52] WARNING: no name column found on line 114
[05:50:52] WARNING: no name column found on line 115
[05:50:52] WARNING: no name column found on line 116
[05:50:52] WARNING: no name column found on line 117
[05:50:52] WARNING: no name column found on line 118
[05:50:52] WARNING: no name column found on line 119
[05:50:52] WARNING: no name column found on line 120
[05:50:52] WARNING: no name column found on line 121
[05:50:52] WARNING: no name column found on line 122
[05:50:52] WARNING: no name column found on line 123
[05:50:52] WARNING: no name column found on line 124
[05:50:52] WARNING: no name column found on line 125
[05:50:52] WARNING: no name column found on line 126
[05:50:52] WARNING: no name column found on line 127
[05:50:52] WARNING: no name column found on line 128
[05:50:52] WARNING: no name column found on line 129
[05:50:52] WARNING: no name column found on line 130
[05:50:52] WARNING: no name column found on line 131
[05:50:52] WARNING: no name column found on line 132
[05:50:52] WARNING: no name column found on line 133
[05:50:52] WARNING: no name column found on line 134
[05:50:52] WARNING: no name column found on line 135
[05:50:52] WARNING: no name column found on line 136
[05:50:52] WARNING: no name column found on line 137
[05:50:52] WARNING: no name column found on line 138
[05:50:52] WARNING: no name column found on line 139
[05:50:52] WARNING: no name column found on line 140
[05:50:52] WARNING: no name column found on line 141
[05:50:52] WARNING: no name column found on line 142
[05:50:52] WARNING: no name column found on line 143
[05:50:52] WARNING: no name column found on line 144
[05:50:52] WARNING: no name column found on line 145
[05:50:52] WARNING: no name column found on line 146
[05:50:52] WARNING: no name column found on line 147
[05:50:52] WARNING: no name column found on line 148
[05:50:52] WARNING: no name column found on line 149
[05:50:52] WARNING: no name column found on line 150
[05:50:52] WARNING: no name column found on line 151
[05:50:52] WARNING: no name column found on line 152
[05:50:52] WARNING: no name column found on line 153
[05:50:52] WARNING: no name column found on line 154
[05:50:52] WARNING: no name column found on line 155
[05:50:52] WARNING: no name column found on line 156
[05:50:52] WARNING: no name column found on line 157
[05:50:52] WARNING: no name column found on line 158
[05:50:52] WARNING: no name column found on line 159
[05:50:52] WARNING: no name column found on line 160
[05:50:52] WARNING: no name column found on line 161
[05:50:52] WARNING: no name column found on line 162
[05:50:52] WARNING: no name column found on line 163
[05:50:52] WARNING: no name column found on line 164
[05:50:52] WARNING: no name column found on line 165
[05:50:52] WARNING: no name column found on line 166
[05:50:52] WARNING: no name column found on line 167
[05:50:52] WARNING: no name column found on line 168
[05:50:52] WARNING: no name column found on line 169
[05:50:52] WARNING: no name column found on line 170
[05:50:52] WARNING: no name column found on line 171
[05:50:52] WARNING: no name column found on line 172
[05:50:52] WARNING: no name column found on line 173
[05:50:52] WARNING: no name column found on line 174
[05:50:52] WARNING: no name column found on line 175
[05:50:52] WARNING: no name column found on line 176
[05:50:52] WARNING: no name column found on line 177
[05:50:52] WARNING: no name column found on line 178
[05:50:52] WARNING: no name column found on line 179
[05:50:52] WARNING: no name column found on line 180
[05:50:52] WARNING: no name column found on line 181
[05:50:52] WARNING: no name column found on line 182
[05:50:52] WARNING: no name column found on line 183
[05:50:52] WARNING: no name column found on line 184
[05:50:52] WARNING: no name column found on line 185
[05:50:52] WARNING: no name column found on line 186
[05:50:52] WARNING: no name column found on line 187
[05:50:52] WARNING: no name column found on line 188
[05:50:52] WARNING: no name column found on line 189
[05:50:52] WARNING: no name column found on line 190
[05:50:52] WARNING: no name column found on line 191
[05:50:52] WARNING: no name column found on line 192
[05:50:52] WARNING: no name column found on line 193
[05:50:52] WARNING: no name column found on line 194
[05:50:52] WARNING: no name column found on line 195
[05:50:52] WARNING: no name column found on line 196
[05:50:52] WARNING: no name column found on line 197
[05:50:52] WARNING: no name column found on line 198
[05:50:52] WARNING: no name column found on line 199
[05:50:52] WARNING: no name column found on line 200
[05:50:52] WARNING: no name column found on line 201
[05:50:52] WARNING: no name column found on line 202
[05:50:52] WARNING: no name column found on line 203
[05:50:52] WARNING: no name column found on line 204
[05:50:52] WARNING: no name column found on line 205
[05:50:52] WARNING: no name column found on line 206
[05:50:52] WARNING: no name column found on line 207
[05:50:52] WARNING: no name column found on line 208
[05:50:52] WARNING: no name column found on line 209
[05:50:52] WARNING: no name column found on line 210
[05:50:52] WARNING: no name column found on line 211
[05:50:52] WARNING: no name column found on line 212
[05:50:52] WARNING: no name column found on line 213
[05:50:52] WARNING: no name column found on line 214
[05:50:52] WARNING: no name column found on line 215
[05:50:52] WARNING: no name column found on line 216
......
----------------------------------------------------------------------
Ran 9 tests in 0.938s

OK
..................
----------------------------------------------------------------------
Ran 18 tests in 5.505s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.688s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.258s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.158s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.127s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.728s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.013s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.027s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.012s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.039s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.122s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.131s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 21.903s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.364s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.027s

OK
..../<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/Randomize.py:29: DeprecationWarning: The *random* parameter to shuffle() has been deprecated
since Python 3.9 and will be removed in a subsequent version.
  random.shuffle(order, random=random.random)
.
----------------------------------------------------------------------
Ran 5 tests in 0.675s

OK
.....................
----------------------------------------------------------------------
Ran 21 tests in 56.484s

OK
mol_197
219.10,35.89,110.98,11.56,110.32,11.04,95.23,10.25,0.00
mol_223
251.91,7.32,135.48,1.38,135.41,1.39,85.51,0.37,0.00
mol_269
216.26,5.67,105.00,0.87,103.81,0.89,89.27,0.92,6.00
.
----------------------------------------------------------------------
Ran 1 test in 0.002s

OK
...[05:53:06] 

****
Pre-condition Violation
molecule has no conformers
Violation occurred on line 37 in file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
Failed Expression: dp_mol->getNumConformers()
****

.
----------------------------------------------------------------------
Ran 4 tests in 0.162s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 132.272s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.712s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.097s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.156s

OK
.....[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
[05:55:32] WARNING: not removing hydrogen atom without neighbors
.....
----------------------------------------------------------------------
Ran 10 tests in 2.402s

OK
ssssss.....s.....
----------------------------------------------------------------------
Ran 17 tests in 1.282s

OK (skipped=7)
s
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK (skipped=1)
..........
----------------------------------------------------------------------
Ran 10 tests in 4.692s

OK
..[05:55:51] SMARTS Parse Error: syntax error while parsing: boromicacid
[05:55:51] SMARTS Parse Error: Failed parsing SMARTS 'boromicacid' for input: 'boromicacid'
[05:55:51] SMARTS Parse Error: syntax error while parsing: carboxylicacid,acidchlroide
[05:55:51] SMARTS Parse Error: Failed parsing SMARTS 'carboxylicacid,acidchlroide' for input: 'carboxylicacid,acidchlroide'
[05:55:51] SMARTS Parse Error: syntax error while parsing: carboxyliccaid,acidchloride
[05:55:51] SMARTS Parse Error: Failed parsing SMARTS 'carboxyliccaid,acidchloride' for input: 'carboxyliccaid,acidchloride'
[05:55:51] reaction has no reactants
[05:55:51] reaction has no products
[05:55:51] initialization failed
[05:55:51] reaction has no reactants
[05:55:51] reaction has no products
.
----------------------------------------------------------------------
Ran 3 tests in 0.221s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.095s

OK
!!! TEST FAILURE:  python UnitTestMol3D.py {}
!!! TEST FAILURE:  python UnitTestDocTestsChem.py {}


99% tests passed, 2 tests failed out of 162

Total Test time (real) = 1773.41 sec

The following tests FAILED:
	 78 - pyMolDescriptors (Failed)
	161 - pythonTestDirChem (Failed)
Errors while running CTest
make[2]: *** [Makefile:128: test] Error 8
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test: error: cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4 returned exit code 2
make[1]: [debian/rules:125: override_dh_auto_test] Error 25 (ignored)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 fakeroot debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=cmake --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_testroot -a -O--buildsystem=cmake -O--parallel
   dh_prep -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
dh_auto_install: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks
make  -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/depend
make  -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/depend
make  -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/depend
make  -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/build
make  -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/build
make  -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/build
make  -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API && /usr/bin/cmake -E copy /<<PKGBUILDDIR>>/External/INCHI-API/python/noinchi.py /<<PKGBUILDDIR>>/rdkit/Chem/inchi.py
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/catch/CMakeFiles/catch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/coordgen_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target catch
make  -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend
[  0%] Built target ringdecomposerlib_support
[  0%] Built target coordgen_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/depend
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/DependInfo.cmake --color=
[  0%] Built target inchi_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/build
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDStreams/CMakeFiles/RDStreams.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/RDGeneral.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  1%] Built target hc
[  1%] Built target RDStreams
[  2%] Built target RDGeneral
make  -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make  -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make  -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make  -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
make  -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/testRDValue.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDBoost/CMakeFiles/RDBoost.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/DataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Built target testRDValue
[  2%] Built target EigenSolvers
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
[  2%] Built target RDBoost
make  -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
[  4%] Built target DataStructs
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
make  -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make  -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make  -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/testDict.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/CMakeFiles/testMatrices.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Catalogs/CMakeFiles/Catalogs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Built target testDict
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testMatrices
make  -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make  -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make  -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
[  5%] Built target Catalogs
make  -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Query/CMakeFiles/testQuery.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
[  6%] Built target testQuery
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make  -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target testMatCalc
make  -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
[  6%] Built target SimDivPickers
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
[  6%] Built target rdMetricMatrixCalc
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target Clustering
make  -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/RDGeometryLib.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Built target InfoTheory
make  -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
[  7%] Built target rdBase
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make  -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
[  8%] Built target RDGeometryLib
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testFPB.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testDataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target testFPB
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testMultiFPB.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target testDataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make  -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target testMultiFPB
make  -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/testGrid.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target cDataStructs
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
[ 10%] Built target geometryTestsCatch
make  -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake --color=
[ 11%] Built target testGrid
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/testTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/CMakeFiles/testConrec.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target testTransforms
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
[ 13%] Built target rdGeometry
make  -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
[ 13%] Built target pickersTestsCatch
make  -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
[ 13%] Built target testConrec
make  -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target testSimDivPickers
make  -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Data/CMakeFiles/cQuantize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target rdInfoTheory
[ 14%] Built target rdSimDivPickers
[ 14%] Built target cQuantize
make  -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make  -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
[ 15%] Built target ChemicalFeatures
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
[ 15%] Built target Alignment
make  -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/GraphMol.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target testChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target GraphMol
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make  -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make  -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
[ 20%] Built target testAlignment
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
[ 21%] Built target rdAlignment
make  -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
[ 21%] Built target Trajectory
make  -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
[ 21%] Built target SubstructMatch
make  -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
[ 21%] Built target MolTransforms
make  -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
[ 23%] Built target SmilesParse
make  -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 23%] Built target Subgraphs
make  -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
[ 24%] Built target PartialCharges
make  -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
[ 25%] Built target MolCatalog
[ 26%] Built target MolInterchange
make  -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
make  -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make  -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 27%] Built target SLNParse
make  -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
[ 28%] Built target rdqueries
[ 28%] Built target rdtrajectory
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
make  -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
[ 29%] Built target rdChemicalFeatures
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build
make  -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target Optimizer
make  -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
[ 30%] Built target graphmolSGroupCatch
[ 31%] Built target graphmolcpTest
make  -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
[ 31%] Built target graphmolqueryTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/test-valgrind.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target graphmolMemTest1
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
[ 32%] Built target test-valgrind
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
[ 33%] Built target graphmolIterTest
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
[ 33%] Built target ChemTransforms
make  -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target smiTest2
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Built target smaTest1
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
[ 35%] Built target FilterCatalog
make  -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
[ 37%] Built target Fingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make  -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target testSubgraphs2
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target testSubgraphs1
make  -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
[ 39%] Built target testPartialCharges
[ 40%] Built target FragCatalog
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build'.
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
[ 41%] Built target rdPartialCharges
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
[ 41%] Built target rdMolTransforms
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target ShapeHelpers
make  -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
[ 43%] Built target MolChemicalFeatures
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
[ 43%] Built target ReducedGraphs
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Built target rdMolInterchange
make  -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
[ 45%] Built target testSLNParse
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
[ 46%] Built target SubstructLibrary
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
[ 46%] Built target rdSLNParse
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdMHFPFingerprint.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build'.
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/CMakeFiles/ForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 47%] Built target rdMHFPFingerprint
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
[ 48%] Built target testOptimizer
[ 51%] Built target ForceField
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
[ 53%] Built target rdchem
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 53%] Built target rdFingerprintGenerator
make  -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
[ 53%] Built target testReducedGraphs
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
[ 53%] Built target rdShapeHelpers
[ 54%] Built target rdMolChemicalFeatures
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 54%] Built target rdReducedGraphs
[ 55%] Built target ForceFieldHelpers
make  -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make  -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make  -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make  -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make  -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/CMakeFiles/DistGeometry.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build'.
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target rdForceField
[ 57%] Built target DistGeometry
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
[ 57%] Built target rdForceFieldHelpers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
make  -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
[ 57%] Built target MolAlign
make  -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/CMakeFiles/testDistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testDistGeom
make  -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake --color=
[ 58%] Built target DistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
[ 59%] Built target DistGeom
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
[ 59%] Built target Depictor
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
[ 59%] Built target rdCoordGen
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Built target FileParsers
make  -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make  -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make  -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make  -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/testCoordGen.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Built target testUFFForceField
make  -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
[ 64%] Built target testCoordGen
make  -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
[ 64%] Built target testMMFFForceField
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
[ 64%] Built target graphmolTestsCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/testSGroup.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/hanoiTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target graphmolTest1
make  -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testSGroup
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
[ 64%] Built target graphmoltestPicklerGlobalSetting
make  -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
[ 64%] Built target hanoiTest
make  -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/molBundleTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target graphmolMolOpsTest
make  -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
[ 64%] Built target graphmoltestChirality
make  -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
[ 64%] Built target molBundleTest
make  -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
[ 65%] Built target graphmoltestPickler
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
[ 65%] Built target resMolSupplierTest
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
[ 66%] Built target testDepictor
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
[ 66%] Built target rdDepictor
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
[ 67%] Built target cxsmilesTest
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target smiTestCatch
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake --color=
[ 68%] Built target smiTest1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMol2ToMol
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
[ 68%] Built target fileParsersTest1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testPropertyLists
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
[ 68%] Built target testMolSupplier
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testTplParser
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMolWriter
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake --color=
[ 68%] Built target testExtendedStereoParsing
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
[ 68%] Built target testSequence
make  -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target substructTestCatch
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake --color=
[ 68%] Built target fileParsersCatchTest
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testSubstructMatch
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
[ 70%] Built target Descriptors
make  -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target chemTransformsTestCatch
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
[ 70%] Built target testChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
[ 71%] Built target filterCatalogTest
make  -f Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
[ 72%] Built target rdfiltercatalog
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testATF.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testFragCatalog
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testATF
make  -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
[ 73%] Built target rdfragcatalog
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake --color=
[ 73%] Built target testAUTOCORR2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target rdMolDescriptors
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
[ 73%] Built target fpTestCatch
[ 73%] Built target testDescriptors
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/depend
make  -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
[ 73%] Built target testFingerprints
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build
make  -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testMHFPFingerprint.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Built target testFingerprintGenerators
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
[ 75%] Built target testMolTransforms
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
[ 75%] Built target testMHFPFingerprint
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
[ 75%] Built target testMMFFForceFieldHelpersMultiThread
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target testMMFFForceFieldHelpers
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
[ 76%] Built target testUFFForceFieldHelpers
[ 76%] Built target testCrystalForceField
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
[ 76%] Built target testDistGeomHelpers
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target rdDistGeom
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
[ 77%] Built target testFeatures
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
[ 77%] Built target testMolAlign
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
[ 77%] Built target rdMolAlign
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target testShapeHelpers
make  -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
[ 79%] Built target testMolCatalog
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
[ 80%] Built target rdMolCatalog
make  -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
[ 81%] Built target FMCS
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
[ 82%] Built target MolHash
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
[ 82%] Built target MMPA
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
[ 83%] Built target trajectoryTest
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
[ 83%] Built target substructLibraryTest
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Built target rdSubstructLibrary
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
[ 84%] Built target RGroupDecomposition
make  -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
[ 84%] Built target molInterchangeTest1
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target rdmolfiles
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
[ 86%] Built target testFMCS
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake --color=
[ 86%] Built target rdFMCS
make  -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
[ 89%] Built target ChemReactions
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target molHashCatchTest
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
[ 89%] Built target testMolHash
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
[ 89%] Built target FMCStest
[ 89%] Built target rdMolHash
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target testMMPA
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target rdMMPA
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
[ 89%] Built target testRGroupDecomp
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
[ 89%] Built target rdRGroupDecomposition
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target testReaction
[ 90%] Built target testReactionFingerprints
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make  -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
[ 90%] Built target rxnTestCatch
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
[ 93%] Built target MolStandardize
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target testEnumeration
[ 93%] Built target rdChemReactions
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
[ 93%] Built target MolDraw2D
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
[ 94%] Built target molStandardizeTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target molValidateTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
[ 95%] Built target molChargeTest
[ 95%] Built target molNormalizeTest
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
[ 95%] Built target molStandardizeSmallTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target molTautomerTest
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/DependInfo.cmake --color=
[ 95%] Built target molStandardizeCatchTest
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
[ 96%] Built target molFragmentTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ScaffoldNetwork/CMakeFiles/ScaffoldNetwork.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
[ 97%] Built target rdMolStandardize
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target ScaffoldNetwork
make  -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
[ 97%] Built target moldraw2DTestCatch
[ 97%] Built target moldraw2DRxnTest1
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make  -f Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build
[ 98%] Built target moldraw2DTest1
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ScaffoldNetwork/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ScaffoldNetwork/CMakeFiles/testScaffoldNetwork.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target testScaffoldNetwork
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make  -f Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build.make Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build
[ 98%] Built target rdMolDraw2D
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ScaffoldNetwork/Wrap/CMakeFiles/rdScaffoldNetwork.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target rdmolops
[100%] Built target rdScaffoldNetwork
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make  -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Avalon
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Avalon/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AllChem.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/BRICS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Crippen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/DSViewer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/canvasbase.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/spingCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/EState.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fragments.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Graphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Lipinski.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MCS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/charge.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/errors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/metal.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/test_standardizer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validations.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolSurf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PandasTools.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PropertyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/QED.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Randomize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Recap.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SATIS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SaltRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/ScaffoldNetwork.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ShowMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/testCombined.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/inchi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbConnection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbModule.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbReport.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/AnalyzeComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/BuildComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Butina.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clusters.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Murtagh.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Resemblance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/murtagh_test.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/BayesComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/Composite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/CompositeRun.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/MLData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Quantize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/SplitData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Stats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Transforms.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/DecTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/Forest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/ID3.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/PruneTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/QuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/SigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/Tree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/randomtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/EnrichPlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/GrowComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/DistFunctions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MatOps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/Packager.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/ActFuncs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/NetNode.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/Network.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/Trainers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/architecture.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/Risk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/Scoring.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ScreenComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/files.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDConfig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDLogger.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDRandom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/TestRunner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Filter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Node.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Output.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Supply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/six.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/pidPS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK/pidTK.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/pidWX.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/colors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/pagesizes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/pid.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/stringformat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/pidtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/pstests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/__pycache__/pidtest.cpython-39.pyc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/__pycache__/pstests.cpython-39.pyc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.ps
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/12h.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/cactvs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemdraw.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/comhack.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/fileutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/listutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/retest.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/spiral.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test1.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test2.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test3.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs2.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/fragmentPatterns.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/normalizations.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/tautomerTransforms.in
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.props.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5K.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5k.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/run_tests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/test_set3.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/wehi_mols.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/wehi_pains.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/bench2.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.chk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example1.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example10.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example11.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example12.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example13.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example14.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example15.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example16.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example17.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example2.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example3.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example4.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example5.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example6.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example7.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example8.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example9.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInC++.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInPython.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Overview.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/RDKit_Book.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/api-docs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/AmideBond.rxn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/chiral.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/input.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/invalid.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.test.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.train.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/test_multi_colours.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts/extapi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molA.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molB.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molC.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molD.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molE.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molF.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molG.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_0_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_13_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_13_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_17_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_17_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_19_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_1_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_20_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_20_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_21_im5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_22_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_22_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_23_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_23_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_2_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_2_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_3_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_6_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_6_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_6_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_7_im6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/RDKitCB_8_im0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_annotation_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/atom_highlights_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/indole1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553_2.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_charges.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_crippen.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_rf.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/stereo_annotation.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/substruct_search_parameters1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/modules.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.DSViewer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDraw.rdMolDraw2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rdScaffoldNetwork.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMHFPFingerprint.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdStructChecker.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.cDataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.DistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rdForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rdGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clustering.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rdAlignment.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rdSimDivPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.demo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rdBase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.six.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Install.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/An_overview_of_the_RDKit_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Backwards_incompatible_changes_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Getting_Started_with_RDKit_in_Python_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Installation_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/RDKit_cookbook_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Supplementary_Text_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_Book_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_database_cartridge_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/introduction_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/terminology_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/CodingStandards.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/SGroups.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.lrg.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/compounds.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/RD.css
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/glare.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/ifg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/AddLabels.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/ClusterFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/CreateFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePredict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/BaseFeatures_DIP2_NoMicrospecies.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/Frames.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/npscorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/publicnp.model.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/demo.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/pbf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/cansmirk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/create_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_cansmirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_smi.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_smi_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_smart_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_smarts_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_fragmented.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_default.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxratio.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mol_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smiles_mol_trans.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks_mol_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_transfroms.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/indexing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/mol_transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/search_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/TestDbCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/loadErrors.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Compounds.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/AtomPairs.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Fingerprints.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Descriptors.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/test.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/CoordGen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdCoordGen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail/float_functions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/detail/hash_float.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/extensions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash_fwd.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/rdBase.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDStreams/streams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Conrec.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField/rdForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstanceGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/primes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/Enumerate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/CartesianProduct.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSample.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/BCUT.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AtomFeat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MHFP.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMHFPFingerprint.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/PatternFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdchem.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdmolops.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdqueries.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitScaffoldNetwork.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ScaffoldNetwor/ScaffoldNetwork.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/rdScaffoldNetwork.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/NullQueryAlgebra.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/OrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/Query.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/DistPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/LeaderPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2020.03.4
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDPaths.py
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
ln -sf /usr/share/fonts/truetype/freefont/FreeSans.ttf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
dh_install -ppython3-rdkit /usr/lib/python3
dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use)
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/docs/
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
dh_numpy3
dh_install --list-missing
dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_install: warning: Please use dh_missing --list-missing/--fail-missing instead
dh_install: warning: This feature will be removed in compat 12.
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config-version.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets-none.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example1.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example10.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example11.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example12.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example13.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example14.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example15.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example16.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example17.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example2.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example3.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example4.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example5.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example6.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example7.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example8.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example9.cpp exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Cartridge.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInC++.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInPython.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Install.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Makefile exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/Overview.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/RDKit_Book.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/api-docs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/conf.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/AmideBond.rxn exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.smi exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/cdk2.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/chiral.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/input.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/invalid.mol exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.test.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.train.sdf exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/data/test_multi_colours.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/exts/extapi.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molA.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molB.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molC.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molD.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molE.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molF.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/EnhancedStereoSSS_molG.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_0_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_0_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_13_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_13_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_17_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_17_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_19_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_1_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_1_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_20_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_20_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im4.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_21_im5.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_22_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_22_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_23_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_23_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_2_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_2_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_3_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_6_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_6_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_6_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im4.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im5.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_7_im6.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/RDKitCB_8_im0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/atom_annotation_1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/atom_highlights_1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/atom_highlights_2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/atom_highlights_3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_mol1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_mol2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/indole1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_0.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_10.jpg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_10.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_11.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_12.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_4.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_5.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_6.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_7.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_8.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_9.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/rdk_bit1553.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/rdk_bit1553_2.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_charges.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_crippen.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_fp1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_fp2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_fp3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_rf.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/stereo_annotation.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/images/substruct_search_parameters1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/index.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/modules.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.DSViewer.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDraw.rdMolDraw2D.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rdScaffoldNetwork.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMHFPFingerprint.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdStructChecker.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.cDataStructs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.DistGeom.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rdForceField.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rdGeometry.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clustering.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rdAlignment.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rdSimDivPickers.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.demo.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.rdBase.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.six.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/An_overview_of_the_RDKit_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Backwards_incompatible_changes_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Getting_Started_with_RDKit_in_Python_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Installation_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Makefile exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/RDKit_cookbook_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Supplementary_Text_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/The_RDKit_Book_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/The_RDKit_database_cartridge_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/conf.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/index.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/introduction_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_10.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/terminology_jp.rst exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/CodingStandards.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/EnhancedStereo.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/SGroups.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.ai exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.inkscape.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.lrg.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/compounds.txt exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/README exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/Scripts/test.sh exists in debian/tmp but is not installed to anywhere 
dh_missing: warning: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere 
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (48), librdkit1 (94), postgresql-13-rdkit (0), python3-rdkit (1), rdkit-data (3), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	If the omission is intentional or no other helper can take care of this consider adding the
	paths to debian/not-installed.
mkdir -p /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp /<<PKGBUILDDIR>>/Docs/Book/_build/latex/RDKit.pdf /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /<<PKGBUILDDIR>>/Docs/Book/_build/html /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
pg_buildext install /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v postgresql-%v-rdkit
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### PostgreSQL 13 install ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-13'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/share/postgresql/13/extension'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/share/postgresql/13/extension'
/usr/bin/install -c -m 755  rdkit.so '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/rdkit.so'
/usr/bin/install -c -m 644 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.control '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/share/postgresql/13/extension/'
/usr/bin/install -c -m 644  rdkit--3.8.sql '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/share/postgresql/13/extension/'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode/rdkit'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/
/usr/bin/install -c -m 644 rdkit_io.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 mol_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 sfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rxn_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rdkit_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gin.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 low_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 guc.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 cache.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 adapter.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bitstring.bc '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode'/rdkit/./
cd '/<<PKGBUILDDIR>>/debian/postgresql-13-rdkit/usr/lib/postgresql/13/lib/bitcode' && /usr/lib/llvm-11/bin/llvm-lto -thinlto -thinlto-action=thinlink -o rdkit.index.bc rdkit/rdkit_io.bc rdkit/mol_op.bc rdkit/bfp_op.bc rdkit/sfp_op.bc rdkit/rxn_op.bc rdkit/rdkit_gist.bc rdkit/bfp_gist.bc rdkit/bfp_gin.bc rdkit/low_gist.bc rdkit/guc.bc rdkit/cache.bc rdkit/adapter.bc rdkit/bitstring.bc
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-13'
### End 13 install ###
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/cppapi/jquery.js
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/jquery.js
ln -sf /usr/share/javascript/underscore/underscore.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/underscore.js
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=cmake -O--parallel
dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_python3
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_python3 -ppython3-rdkit
I: dh_python3 fs:343: renaming rdBase.so to rdBase.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdChemReactions.so to rdChemReactions.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdChemicalFeatures.so to rdChemicalFeatures.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdCoordGen.so to rdCoordGen.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdDepictor.so to rdDepictor.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdDistGeom.so to rdDistGeom.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdFMCS.so to rdFMCS.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMHFPFingerprint.so to rdMHFPFingerprint.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMMPA.so to rdMMPA.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolAlign.so to rdMolAlign.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolCatalog.so to rdMolCatalog.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolDescriptors.so to rdMolDescriptors.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolHash.so to rdMolHash.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolInterchange.so to rdMolInterchange.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolTransforms.so to rdMolTransforms.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdPartialCharges.so to rdPartialCharges.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdReducedGraphs.so to rdReducedGraphs.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSLNParse.so to rdSLNParse.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdShapeHelpers.so to rdShapeHelpers.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSubstructLibrary.so to rdSubstructLibrary.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdchem.so to rdchem.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdfiltercatalog.so to rdfiltercatalog.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdfragcatalog.so to rdfragcatalog.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdmolfiles.so to rdmolfiles.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdmolops.so to rdmolops.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdqueries.so to rdqueries.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdtrajectory.so to rdtrajectory.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolDraw2D.so to rdMolDraw2D.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolStandardize.so to rdMolStandardize.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdScaffoldNetwork.so to rdScaffoldNetwork.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming cDataStructs.so to cDataStructs.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming DistGeom.so to DistGeom.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdForceField.so to rdForceField.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdGeometry.so to rdGeometry.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming Clustering.so to Clustering.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming cQuantize.so to cQuantize.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdInfoTheory.so to rdInfoTheory.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdAlignment.so to rdAlignment.cpython-39-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSimDivPickers.so to rdSimDivPickers.cpython-39-arm-linux-gnueabihf.so
dh_numpy3 -ppython3-rdkit
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installinit -a -O--buildsystem=cmake -O--parallel
dh_installinit: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_lintian -a -O--buildsystem=cmake -O--parallel
dh_lintian: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_perl -a -O--buildsystem=cmake -O--parallel
   dh_link -a -O--buildsystem=cmake -O--parallel
   dh_strip_nondeterminism -a -O--buildsystem=cmake -O--parallel
   dh_compress -a -O--buildsystem=cmake -O--parallel
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_fixperms -a -O--buildsystem=cmake -O--parallel
   dh_missing -a -O--buildsystem=cmake -O--parallel
dh_missing: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_strip -a -O--buildsystem=cmake -O--parallel
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_makeshlibs -a -O--buildsystem=cmake -O--parallel
dh_makeshlibs: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_shlibdeps -a -O--buildsystem=cmake -O--parallel
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDescriptors.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolDraw2D.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGraphMol.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSmilesParse.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSimDivPickers.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolHash.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitPartialCharges.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTrajectory.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeometryLib.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitShapeHelpers.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDataStructs.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSLNParse.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructMatch.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDepictor.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolTransforms.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitEigenSolvers.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitReducedGraphs.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMMPA.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemTransforms.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitScaffoldNetwork.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceField.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeneral.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFilterCatalog.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemReactions.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubgraphs.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFragCatalog.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolChemicalFeatures.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitInfoTheory.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolInterchange.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAlignment.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDBoost.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFileParsers.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFingerprints.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFMCS.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructLibrary.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolCatalog.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemicalFeatures.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRGroupDecomposition.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCatalogs.so.1.2020.03.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolStandardize.so.1.2020.03.4 found in none of the libraries
   dh_installdeb -a -O--buildsystem=cmake -O--parallel
dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_gencontrol -a -O--buildsystem=cmake -O--parallel
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package postgresql-13-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit-dev: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-13-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake -O--parallel
   dh_builddeb -a -O--buildsystem=cmake -O--parallel
dpkg-deb: building package 'librdkit1' in '../librdkit1_202003.4-4+b1_armhf.deb'.
dpkg-deb: building package 'postgresql-13-rdkit-dbgsym' in '../postgresql-13-rdkit-dbgsym_202003.4-4+b1_armhf.deb'.
dpkg-deb: building package 'python3-rdkit' in '../python3-rdkit_202003.4-4+b1_armhf.deb'.
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_202003.4-4+b1_armhf.deb'.
dpkg-deb: building package 'postgresql-13-rdkit' in '../postgresql-13-rdkit_202003.4-4+b1_armhf.deb'.
dpkg-deb: building package 'librdkit1-dbgsym' in '../librdkit1-dbgsym_202003.4-4+b1_armhf.deb'.
dpkg-deb: building package 'python3-rdkit-dbgsym' in '../python3-rdkit-dbgsym_202003.4-4+b1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../rdkit_202003.4-4+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-12-12T06:04:08Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


rdkit_202003.4-4+b1_armhf.changes:
----------------------------------

Format: 1.8
Date: Mon, 02 Nov 2020 01:09:33 -0500
Source: rdkit (202003.4-4)
Binary: librdkit-dev librdkit1 librdkit1-dbgsym postgresql-13-rdkit postgresql-13-rdkit-dbgsym python3-rdkit python3-rdkit-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 202003.4-4+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1  - Collection of cheminformatics and machine-learning software (shar
 postgresql-13-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python3-rdkit - Collection of cheminformatics and machine-learning software
Changes:
 rdkit (202003.4-4+b1) bullseye-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
 a3c2f22e347558efa9787fdf5149be4175b5833c 325488 librdkit-dev_202003.4-4+b1_armhf.deb
 fc4211fa5f0934f35011746131952cd4ab84c204 79271884 librdkit1-dbgsym_202003.4-4+b1_armhf.deb
 daac132c961edca4739be5d1db4b916f8e0208aa 2592156 librdkit1_202003.4-4+b1_armhf.deb
 fd02aa8cd0bc531a145412fb4bbd87584a862e71 817792 postgresql-13-rdkit-dbgsym_202003.4-4+b1_armhf.deb
 032f02d18e745c9e126fadceee566e772496d350 349204 postgresql-13-rdkit_202003.4-4+b1_armhf.deb
 8b05cc8a86b04d064d21e16d7292ab67765a34ce 57898264 python3-rdkit-dbgsym_202003.4-4+b1_armhf.deb
 02cb51e247607755780fcf82f8c9dd325d3095ea 3003932 python3-rdkit_202003.4-4+b1_armhf.deb
 677ff216a55dd6a904e2605cb1a2150e8a7fe81a 15077 rdkit_202003.4-4+b1_armhf.buildinfo
Checksums-Sha256:
 3f9291ad5f454a1615d938dbb1f3bf4e3d856ebc867f7bf5a0ad4ce4a479bb05 325488 librdkit-dev_202003.4-4+b1_armhf.deb
 973d2184423bd490e471b5c7363f3f2799f0fb8e0efbfc054f908fe590a556d8 79271884 librdkit1-dbgsym_202003.4-4+b1_armhf.deb
 2837fd960ac5ddd1976cd0d9be5861fea38f2a54883a2be4d3a7d71140289b2c 2592156 librdkit1_202003.4-4+b1_armhf.deb
 1c28cc32e0f75958cda3d139fe33ce7f404d97d8473eba53c5be5b877959d3cb 817792 postgresql-13-rdkit-dbgsym_202003.4-4+b1_armhf.deb
 45cb9ec3424d9c08e34bcd07fd4c5c5344fea5c49ac4a76898bcb209636512a7 349204 postgresql-13-rdkit_202003.4-4+b1_armhf.deb
 2f889aa3ab44e86b6cab1b6c330ee6e75576cdc4fcbc36ceab243fab5b02b132 57898264 python3-rdkit-dbgsym_202003.4-4+b1_armhf.deb
 eedcffde18633e83df1d35378e273af5d9092c791a8c1d4a2894bb6c15abde70 3003932 python3-rdkit_202003.4-4+b1_armhf.deb
 e11c4d842f7d2c2129e8c54abd5a64011d903abc376e09e4ec7579e4cc02947c 15077 rdkit_202003.4-4+b1_armhf.buildinfo
Files:
 722f6dfc2d172649dd40052860ae424c 325488 libdevel optional librdkit-dev_202003.4-4+b1_armhf.deb
 67b04b704588d40c1193af94c66a1a3c 79271884 debug optional librdkit1-dbgsym_202003.4-4+b1_armhf.deb
 600d7c3e12d7101e5c8a9b96ac9622aa 2592156 libs optional librdkit1_202003.4-4+b1_armhf.deb
 a47444c984c8852782d60176d9a3aaf5 817792 debug optional postgresql-13-rdkit-dbgsym_202003.4-4+b1_armhf.deb
 7b1ec6344a9b570995f203323ff9bb4b 349204 database optional postgresql-13-rdkit_202003.4-4+b1_armhf.deb
 7dcfb4a65252e0605c1b1d0cf7c57983 57898264 debug optional python3-rdkit-dbgsym_202003.4-4+b1_armhf.deb
 da84bc87606576c46e70821c195c19d9 3003932 python optional python3-rdkit_202003.4-4+b1_armhf.deb
 393dd4ff2d874896db6e1c7f4170d689 15077 science optional rdkit_202003.4-4+b1_armhf.buildinfo

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


librdkit-dev_202003.4-4+b1_armhf.deb
------------------------------------

 new Debian package, version 2.0.
 size 325488 bytes: control archive=8836 bytes.
    1521 bytes,    37 lines      control              
   24913 bytes,   295 lines      md5sums              
 Package: librdkit-dev
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1918
 Depends: librdkit1 (= 202003.4-4+b1)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     15986 2020-07-02 05:58 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1386 2020-07-02 05:58 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1245 2020-07-02 05:58 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1052 2020-07-02 05:58 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2850 2020-07-02 05:58 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
-rw-r--r-- root/root      1867 2020-07-02 05:58 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-rw-r--r-- root/root      3533 2020-07-02 05:58 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/DataStructs/
-rw-r--r-- root/root     11703 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/BitOps.h
-rw-r--r-- root/root      2509 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/BitVect.h
-rw-r--r-- root/root      1120 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/BitVectUtils.h
-rw-r--r-- root/root       584 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/BitVects.h
-rw-r--r-- root/root       917 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/DatastructsException.h
-rw-r--r-- root/root      2742 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-rw-r--r-- root/root       864 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/DiscreteDistMat.h
-rw-r--r-- root/root      4335 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/DiscreteValueVect.h
-rw-r--r-- root/root      3250 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/ExplicitBitVect.h
-rw-r--r-- root/root      9592 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/FPBReader.h
-rw-r--r-- root/root      7650 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/MultiFPBReader.h
-rw-r--r-- root/root      3024 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/SparseBitVect.h
-rw-r--r-- root/root     16349 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/SparseIntVect.h
-rw-r--r-- root/root      1296 2020-07-02 05:58 ./usr/include/rdkit/DataStructs/base64.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/DistGeom/
-rw-r--r-- root/root      3456 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/BoundsMatrix.h
-rw-r--r-- root/root      1653 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/ChiralSet.h
-rw-r--r-- root/root      3577 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-rw-r--r-- root/root      7382 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/DistGeomUtils.h
-rw-r--r-- root/root      1852 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/DistViolationContrib.h
-rw-r--r-- root/root      2007 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/FourthDimContrib.h
-rw-r--r-- root/root      1310 2020-07-02 05:58 ./usr/include/rdkit/DistGeom/TriangleSmooth.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Features/
-rw-r--r-- root/root      2913 2020-07-02 05:58 ./usr/include/rdkit/Features/Feature.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/ForceField/
-rw-r--r-- root/root      1126 2020-07-02 05:58 ./usr/include/rdkit/ForceField/Contrib.h
-rw-r--r-- root/root      8756 2020-07-02 05:58 ./usr/include/rdkit/ForceField/ForceField.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/ForceField/MMFF/
-rw-r--r-- root/root      2988 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/AngleBend.h
-rw-r--r-- root/root      2168 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-rw-r--r-- root/root      2278 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/BondStretch.h
-rw-r--r-- root/root       663 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/Contribs.h
-rw-r--r-- root/root      2074 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-rw-r--r-- root/root      4024 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-rw-r--r-- root/root      2390 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/OopBend.h
-rw-r--r-- root/root     40700 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/Params.h
-rw-r--r-- root/root      1698 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-rw-r--r-- root/root      2386 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/StretchBend.h
-rw-r--r-- root/root      3125 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-rw-r--r-- root/root      2696 2020-07-02 05:58 ./usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/ForceField/UFF/
-rw-r--r-- root/root      3538 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/AngleBend.h
-rw-r--r-- root/root      2139 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-rw-r--r-- root/root      2538 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/BondStretch.h
-rw-r--r-- root/root       599 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/Contribs.h
-rw-r--r-- root/root      2070 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-rw-r--r-- root/root      2719 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/Inversion.h
-rw-r--r-- root/root      2872 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/Nonbonded.h
-rw-r--r-- root/root      4570 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/Params.h
-rw-r--r-- root/root      1694 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-rw-r--r-- root/root      4598 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-rw-r--r-- root/root      2668 2020-07-02 05:58 ./usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Geometry/
-rw-r--r-- root/root      1635 2020-07-02 05:58 ./usr/include/rdkit/Geometry/Grid3D.h
-rw-r--r-- root/root      2027 2020-07-02 05:58 ./usr/include/rdkit/Geometry/GridUtils.h
-rw-r--r-- root/root       449 2020-07-02 05:58 ./usr/include/rdkit/Geometry/Transform.h
-rw-r--r-- root/root      2597 2020-07-02 05:58 ./usr/include/rdkit/Geometry/Transform2D.h
-rw-r--r-- root/root      2749 2020-07-02 05:58 ./usr/include/rdkit/Geometry/Transform3D.h
-rw-r--r-- root/root      8404 2020-07-02 05:58 ./usr/include/rdkit/Geometry/UniformGrid3D.h
-rw-r--r-- root/root      3339 2020-07-02 05:58 ./usr/include/rdkit/Geometry/Utils.h
-rw-r--r-- root/root     14880 2020-07-02 05:58 ./usr/include/rdkit/Geometry/point.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/
-rw-r--r-- root/root     14528 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Atom.h
-rw-r--r-- root/root      5708 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/AtomIterators.h
-rw-r--r-- root/root     10602 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Bond.h
-rw-r--r-- root/root      2362 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/BondIterators.h
-rw-r--r-- root/root      4149 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Canon.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ChemReactions/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/
-rw-r--r-- root/root      4742 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/CartesianProduct.h
-rw-r--r-- root/root      6478 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/Enumerate.h
-rw-r--r-- root/root      6997 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateBase.h
-rw-r--r-- root/root      2599 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h
-rw-r--r-- root/root      2728 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h
-rw-r--r-- root/root      8566 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h
-rw-r--r-- root/root      5466 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSample.h
-rw-r--r-- root/root      6145 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h
-rw-r--r-- root/root      2874 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-rw-r--r-- root/root     18404 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-rw-r--r-- root/root      5967 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-rw-r--r-- root/root      5201 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-rw-r--r-- root/root      4362 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-rw-r--r-- root/root      4685 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-rw-r--r-- root/root      3151 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-rw-r--r-- root/root      6611 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ChemTransforms/
-rw-r--r-- root/root     11650 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-rw-r--r-- root/root      4215 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-rw-r--r-- root/root      1815 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Chirality.h
-rw-r--r-- root/root      4891 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Conformer.h
-rw-r--r-- root/root      6287 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/CoordGen.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/Depictor/
-rw-r--r-- root/root     12272 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-rw-r--r-- root/root     19143 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-rw-r--r-- root/root      7447 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/Descriptors/
-rw-r--r-- root/root      2073 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-rw-r--r-- root/root      1484 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/AtomFeat.h
-rw-r--r-- root/root      2263 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/BCUT.h
-rw-r--r-- root/root      7362 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-rw-r--r-- root/root      4669 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-rw-r--r-- root/root      2116 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-rw-r--r-- root/root      6907 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-rw-r--r-- root/root      1141 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/MQN.h
-rw-r--r-- root/root      2852 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-rw-r--r-- root/root      2253 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-rw-r--r-- root/root      4770 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-rw-r--r-- root/root      4721 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/Property.h
-rw-r--r-- root/root      3938 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-rw-r--r-- root/root      4874 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/DistGeomHelpers/
-rw-r--r-- root/root      3198 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-rw-r--r-- root/root     22748 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/FMCS/
-rw-r--r-- root/root      8071 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FMCS/FMCS.h
-rw-r--r-- root/root      1224 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FMCS/Graph.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/FileParsers/
-rw-r--r-- root/root      8667 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-rw-r--r-- root/root     17744 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-rw-r--r-- root/root      1537 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-rw-r--r-- root/root     16542 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-rw-r--r-- root/root     10801 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-rw-r--r-- root/root      4093 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-rw-r--r-- root/root      1360 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/FilterCatalog/
-rw-r--r-- root/root      9106 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-rw-r--r-- root/root      8977 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-rw-r--r-- root/root      5392 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-rw-r--r-- root/root     19852 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-rw-r--r-- root/root      2477 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/Fingerprints/
-rw-r--r-- root/root      6725 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-rw-r--r-- root/root     12213 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-rw-r--r-- root/root     12775 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-rw-r--r-- root/root      5542 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-rw-r--r-- root/root      6535 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-rw-r--r-- root/root       774 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-rw-r--r-- root/root      9956 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/MHFP.h
-rw-r--r-- root/root      9635 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-rw-r--r-- root/root      8327 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-rw-r--r-- root/root      5539 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-rw-r--r-- root/root      4579 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/
-rw-r--r-- root/root      2328 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-rw-r--r-- root/root      1246 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-rw-r--r-- root/root      4531 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/
-rw-r--r-- root/root     10314 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-rw-r--r-- root/root      5405 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-rw-r--r-- root/root      4176 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/
-rw-r--r-- root/root      2111 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-rw-r--r-- root/root      5038 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-rw-r--r-- root/root      3307 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/FragCatalog/
-rw-r--r-- root/root       817 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-rw-r--r-- root/root      3049 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-rw-r--r-- root/root      3533 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-rw-r--r-- root/root      2605 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-rw-r--r-- root/root      1018 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-rw-r--r-- root/root       479 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/GraphMol.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MMPA/
-rw-r--r-- root/root      3290 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MMPA/MMPA.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolAlign/
-rw-r--r-- root/root      6790 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-rw-r--r-- root/root     13564 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-rw-r--r-- root/root      2654 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolBundle.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolCatalog/
-rw-r--r-- root/root       449 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-rw-r--r-- root/root      2872 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-rw-r--r-- root/root      1075 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/
-rw-r--r-- root/root      2131 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-rw-r--r-- root/root      3245 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-rw-r--r-- root/root      2151 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-rw-r--r-- root/root      2788 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolDraw2D/
-rw-r--r-- root/root     40131 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-rw-r--r-- root/root      3958 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-rw-r--r-- root/root      7399 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-rw-r--r-- root/root      3348 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolHash/
-rw-r--r-- root/root      3162 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolHash/MolHash.h
-rw-r--r-- root/root      1632 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolInterchange/
-rw-r--r-- root/root      2655 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-rw-r--r-- root/root      1923 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolInterchange/details.h
-rw-r--r-- root/root     40670 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolOps.h
-rw-r--r-- root/root      9371 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolPickler.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolStandardize/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/
-rw-r--r-- root/root      1488 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h
-rw-r--r-- root/root      1651 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h
-rw-r--r-- root/root       948 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h
-rw-r--r-- root/root      3657 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-rw-r--r-- root/root      2566 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/
-rw-r--r-- root/root      1592 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h
-rw-r--r-- root/root      1630 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h
-rw-r--r-- root/root       901 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h
-rw-r--r-- root/root      1687 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-rw-r--r-- root/root      5057 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-rw-r--r-- root/root      3275 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-rw-r--r-- root/root      4893 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/
-rw-r--r-- root/root      1542 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h
-rw-r--r-- root/root      1659 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h
-rw-r--r-- root/root      2063 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/
-rw-r--r-- root/root      1539 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h
-rw-r--r-- root/root      1762 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h
-rw-r--r-- root/root       972 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h
-rw-r--r-- root/root      6811 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolStandardize/Validate.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/MolTransforms/
-rw-r--r-- root/root      9199 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-rw-r--r-- root/root      5568 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/MonomerInfo.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/PartialCharges/
-rw-r--r-- root/root       883 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-rw-r--r-- root/root      2612 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-rw-r--r-- root/root     11301 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/PeriodicTable.h
-rw-r--r-- root/root      3743 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/QueryAtom.h
-rw-r--r-- root/root      3795 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/QueryBond.h
-rw-r--r-- root/root     35593 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/QueryOps.h
-rw-r--r-- root/root       852 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/RDKitBase.h
-rw-r--r-- root/root       581 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/RDKitQueries.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/RGroupDecomposition/
-rw-r--r-- root/root      4739 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-rw-r--r-- root/root     23474 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ROMol.h
-rw-r--r-- root/root      6816 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/RWMol.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ReducedGraphs/
-rw-r--r-- root/root      2689 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-rw-r--r-- root/root      6626 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Resonance.h
-rw-r--r-- root/root      6433 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/RingInfo.h
-rw-r--r-- root/root      3460 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Rings.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/SLNParse/
-rw-r--r-- root/root      3435 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-rw-r--r-- root/root      2817 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-rw-r--r-- root/root     11522 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-rw-r--r-- root/root      4247 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SanitException.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ScaffoldNetwor/
-rw-r--r-- root/root      6033 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ScaffoldNetwor/ScaffoldNetwork.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/ShapeHelpers/
-rw-r--r-- root/root      2916 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-rw-r--r-- root/root     11854 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/SmilesParse/
-rw-r--r-- root/root      1269 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-rw-r--r-- root/root      4816 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-rw-r--r-- root/root      1692 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-rw-r--r-- root/root      8221 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-rw-r--r-- root/root       505 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SmilesParse/primes.h
-rw-r--r-- root/root      2068 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/StereoGroup.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/Subgraphs/
-rw-r--r-- root/root      2251 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-rw-r--r-- root/root      5987 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-rw-r--r-- root/root      8184 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SubstanceGroup.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/Substruct/
-rw-r--r-- root/root      8428 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-rw-r--r-- root/root      1172 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/SubstructLibrary/
-rw-r--r-- root/root       838 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SubstructLibrary/PatternFactory.h
-rw-r--r-- root/root     21953 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-rw-r--r-- root/root      6668 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/GraphMol/Trajectory/
-rw-r--r-- root/root      2227 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-rw-r--r-- root/root      4445 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-rw-r--r-- root/root      2193 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/atomic_data.h
-rw-r--r-- root/root       373 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/details.h
-rw-r--r-- root/root     23358 2020-07-02 05:58 ./usr/include/rdkit/GraphMol/new_canon.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Numerics/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Numerics/Alignment/
-rw-r--r-- root/root      1598 2020-07-02 05:58 ./usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-rw-r--r-- root/root      6988 2020-07-02 05:58 ./usr/include/rdkit/Numerics/Conrec.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Numerics/EigenSolvers/
-rw-r--r-- root/root      2282 2020-07-02 05:58 ./usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-rw-r--r-- root/root     10369 2020-07-02 05:58 ./usr/include/rdkit/Numerics/Matrix.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Numerics/Optimizer/
-rw-r--r-- root/root     13215 2020-07-02 05:58 ./usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-rw-r--r-- root/root      2444 2020-07-02 05:58 ./usr/include/rdkit/Numerics/SquareMatrix.h
-rw-r--r-- root/root     10177 2020-07-02 05:58 ./usr/include/rdkit/Numerics/SymmMatrix.h
-rw-r--r-- root/root      8407 2020-07-02 05:58 ./usr/include/rdkit/Numerics/Vector.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/Query/
-rw-r--r-- root/root      1716 2020-07-02 05:58 ./usr/include/rdkit/Query/AndQuery.h
-rw-r--r-- root/root      2728 2020-07-02 05:58 ./usr/include/rdkit/Query/EqualityQuery.h
-rw-r--r-- root/root      2351 2020-07-02 05:58 ./usr/include/rdkit/Query/GreaterEqualQuery.h
-rw-r--r-- root/root      2272 2020-07-02 05:58 ./usr/include/rdkit/Query/GreaterQuery.h
-rw-r--r-- root/root      2325 2020-07-02 05:58 ./usr/include/rdkit/Query/LessEqualQuery.h
-rw-r--r-- root/root      2248 2020-07-02 05:58 ./usr/include/rdkit/Query/LessQuery.h
-rw-r--r-- root/root      2561 2020-07-02 05:58 ./usr/include/rdkit/Query/NullQueryAlgebra.h
-rw-r--r-- root/root      1707 2020-07-02 05:58 ./usr/include/rdkit/Query/OrQuery.h
-rw-r--r-- root/root      6446 2020-07-02 05:58 ./usr/include/rdkit/Query/Query.h
-rw-r--r-- root/root       839 2020-07-02 05:58 ./usr/include/rdkit/Query/QueryObjects.h
-rw-r--r-- root/root      3682 2020-07-02 05:58 ./usr/include/rdkit/Query/RangeQuery.h
-rw-r--r-- root/root      2589 2020-07-02 05:58 ./usr/include/rdkit/Query/SetQuery.h
-rw-r--r-- root/root      1795 2020-07-02 05:58 ./usr/include/rdkit/Query/XOrQuery.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/RDBoost/
-rw-r--r-- root/root      2239 2020-07-02 05:58 ./usr/include/rdkit/RDBoost/PySequenceHolder.h
-rw-r--r-- root/root      9194 2020-07-02 05:58 ./usr/include/rdkit/RDBoost/Wrap.h
-rw-r--r-- root/root       342 2020-07-02 05:58 ./usr/include/rdkit/RDBoost/boost_numpy.h
-rw-r--r-- root/root      7525 2020-07-02 05:58 ./usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-rw-r--r-- root/root       329 2020-07-02 05:58 ./usr/include/rdkit/RDBoost/python.h
-rw-r--r-- root/root     17774 2020-07-02 05:58 ./usr/include/rdkit/RDBoost/python_streambuf.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/
-rw-r--r-- root/root      1142 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/BadFileException.h
-rw-r--r-- root/root      2898 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/BoostEndInclude.h
-rw-r--r-- root/root      3804 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/BoostStartInclude.h
-rw-r--r-- root/root      8972 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/Dict.h
-rw-r--r-- root/root      2078 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/Exceptions.h
-rw-r--r-- root/root      1122 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/FileParseException.h
-rw-r--r-- root/root      7230 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/Invariant.h
-rw-r--r-- root/root      2199 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-rw-r--r-- root/root      6135 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDAny.h
-rw-r--r-- root/root       945 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/RDConfig.h
-rw-r--r-- root/root      3255 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDLog.h
-rw-r--r-- root/root      5107 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDProps.h
-rw-r--r-- root/root       911 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDThreads.h
-rw-r--r-- root/root     15898 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-rw-r--r-- root/root     12674 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-rw-r--r-- root/root      8659 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/RDValue.h
-rw-r--r-- root/root      2467 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/Ranking.h
-rw-r--r-- root/root     16710 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/StreamOps.h
-rw-r--r-- root/root     23584 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/export.h
-rw-r--r-- root/root      3713 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/hanoiSort.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/hash/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/hash/detail/
-rw-r--r-- root/root      4768 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/hash/detail/float_functions.hpp
-rw-r--r-- root/root      5852 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/hash/detail/hash_float.hpp
-rw-r--r-- root/root      4988 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/hash/extensions.hpp
-rw-r--r-- root/root     14786 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/hash/hash.hpp
-rw-r--r-- root/root      1250 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/hash/hash_fwd.hpp
-rw-r--r-- root/root      4208 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/test.h
-rw-r--r-- root/root     15423 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/types.h
-rw-r--r-- root/root      3079 2020-07-02 05:58 ./usr/include/rdkit/RDGeneral/utils.h
-rw-r--r-- root/root       876 2020-11-02 06:09 ./usr/include/rdkit/RDGeneral/versions.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/RDStreams/
-rw-r--r-- root/root       430 2020-07-02 05:58 ./usr/include/rdkit/RDStreams/streams.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/include/rdkit/SimDivPickers/
-rw-r--r-- root/root      2720 2020-07-02 05:58 ./usr/include/rdkit/SimDivPickers/DistPicker.h
-rw-r--r-- root/root      3696 2020-07-02 05:58 ./usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-rw-r--r-- root/root     13452 2020-07-02 05:58 ./usr/include/rdkit/SimDivPickers/LeaderPicker.h
-rw-r--r-- root/root     10068 2020-07-02 05:58 ./usr/include/rdkit/SimDivPickers/MaxMinPicker.h
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitAlignment.so -> libRDKitAlignment.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitCatalogs.so -> libRDKitCatalogs.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitChemReactions.so -> libRDKitChemReactions.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitChemTransforms.so -> libRDKitChemTransforms.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitChemicalFeatures.so -> libRDKitChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDataStructs.so -> libRDKitDataStructs.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDepictor.so -> libRDKitDepictor.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDescriptors.so -> libRDKitDescriptors.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDistGeomHelpers.so -> libRDKitDistGeomHelpers.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDistGeometry.so -> libRDKitDistGeometry.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitEigenSolvers.so -> libRDKitEigenSolvers.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFMCS.so -> libRDKitFMCS.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFileParsers.so -> libRDKitFileParsers.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFilterCatalog.so -> libRDKitFilterCatalog.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFingerprints.so -> libRDKitFingerprints.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitForceField.so -> libRDKitForceField.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitForceFieldHelpers.so -> libRDKitForceFieldHelpers.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFragCatalog.so -> libRDKitFragCatalog.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitGraphMol.so -> libRDKitGraphMol.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitInfoTheory.so -> libRDKitInfoTheory.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolChemicalFeatures.so -> libRDKitMolChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolDraw2D.so -> libRDKitMolDraw2D.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolInterchange.so -> libRDKitMolInterchange.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolStandardize.so -> libRDKitMolStandardize.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolTransforms.so -> libRDKitMolTransforms.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitOptimizer.so -> libRDKitOptimizer.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitPartialCharges.so -> libRDKitPartialCharges.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDBoost.so -> libRDKitRDBoost.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDGeneral.so -> libRDKitRDGeneral.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDGeometryLib.so -> libRDKitRDGeometryLib.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDStreams.so -> libRDKitRDStreams.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRGroupDecomposition.so -> libRDKitRGroupDecomposition.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitReducedGraphs.so -> libRDKitReducedGraphs.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSLNParse.so -> libRDKitSLNParse.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitScaffoldNetwork.so -> libRDKitScaffoldNetwork.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/librdkit-dev/
-rw-r--r-- root/root       223 2020-11-02 06:09 ./usr/share/doc/librdkit-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4845 2020-11-02 06:09 ./usr/share/doc/librdkit-dev/changelog.Debian.gz
-rw-r--r-- root/root     70602 2020-07-02 05:58 ./usr/share/doc/librdkit-dev/changelog.gz
-rw-r--r-- root/root      6705 2020-10-27 11:33 ./usr/share/doc/librdkit-dev/copyright


librdkit1-dbgsym_202003.4-4+b1_armhf.deb
----------------------------------------

 new Debian package, version 2.0.
 size 79271884 bytes: control archive=2648 bytes.
    2269 bytes,    12 lines      control              
    4982 bytes,    47 lines      md5sums              
 Package: librdkit1-dbgsym
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 81419
 Depends: librdkit1 (= 202003.4-4+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1
 Build-Ids: 06e2ad4298bf0e8c7fac86995e3d828e38326eb3 08a50f5e36b5117b6ed2c1402eb9aa23a132dbba 17172c23db9cf564c99e7eee460a316df411667d 174dd599e4354bb102a05187b76e0b1587af5b54 18a6aa714a84a3cf181b7fb8c927d8958955a20f 25a61a6ef23b07f47aa0cd9a273a752b724d6f0d 2a0c6eef69ed2970b3b56d0645d5ddecb33c93ef 347a44ca91682f660d88bff5a7c5693a72f3d292 4ad930d830ec25680f171b5385238827eddb0c39 4cf54b4839e87177f6ca9d95e7ed3f536399baf4 5062e0b7a2de1531c7f3446c9988f86b46783062 5469703fa2c8e2c60e395d92afa16fc9e2d1c32e 6500dd4dc5b962c97236fefc3d9ebeda3a8926c6 656593ff0024df72010c2f194800e9fd81b3ce38 69a3525ac424e9f2278b5de7443ff7f9f7262671 6cf7e69a7556235472f75b1884ea45935a71c714 70e0d93353ee84e4477e29e1fa5d20ea59086650 714d13fdd922ed6bd3031df7674dbc8d19649364 7a7421c15263990f2d3fa32be86df8fb64b6e80b 7cc6c287586bade580e267444772962a6100b888 815361d61795d28cefc07e1c06f346f33a020a64 818ce991026f80c91933a3a02aea6d6efa18117f 842c7f1f17a8f9c2e4a892144ad2d0ef491aa15a 8460c19b2d64bb38b7f50d3b01584e7fcb35c6ce 859d19491ed5b133cb937a8d6091e0ab7410167b 8a4cd732ea5aae870452473115dcb4a5ad73fb85 917c0645a19c4bcfbc2186f94b1586b9a30dada2 93a6bd9c1e3ce2c9966b091476aa1b75ec7d4bc5 96b5e08a2f50a12029cbccf44afc21cd014d7002 9723ab1a2ace3ca002ca60a59f63ea25bc42a9ea 9beffbbe587af1cc7366fa1228db74ab55b56bcc a5a37d2981db2f8aee74172b44aa32c533328005 aa03a34987954bf5c51c6a86f684220528bf9e9c b08d1fe3bfdbbdaad4fb413f84dd36b47f28b145 b70cd3784ee9f028334ca597eb4438774633b3bf bbc077d595719a80b04f6f11f7015ac07449bd69 c8526d539dda495e6490a290cf8b3bfcadd5a1b3 d0a8af1fe2942aa4a9ec071c98048ee3f32ba1e0 d20cdd7c1bde3eed2726e158ae524bef9cf98e52 d709b12ae665b04de67787f89b529abafa2ca41f d78d4b80d2c6b78671ea944423c656d625700125 e7099a7b3315384df853e341763fb9b1a021be97 f08cad42d6abdecd05fd1b0b1420036c1bd43eca f553ca450c41ccd543fb121b785c891a5da15f92 fa360ea6849eb8d397b4d306a6690ee392bf4f32 fa868cda4496461a5508eb9de2292bd8df8e503b faf8485544c50fc63a4edc23c14715843051c1cc

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/06/
-rw-r--r-- root/root    623552 2020-11-02 06:09 ./usr/lib/debug/.build-id/06/e2ad4298bf0e8c7fac86995e3d828e38326eb3.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/08/
-rw-r--r-- root/root   1053064 2020-11-02 06:09 ./usr/lib/debug/.build-id/08/a50f5e36b5117b6ed2c1402eb9aa23a132dbba.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/17/
-rw-r--r-- root/root   2767108 2020-11-02 06:09 ./usr/lib/debug/.build-id/17/172c23db9cf564c99e7eee460a316df411667d.debug
-rw-r--r-- root/root    454568 2020-11-02 06:09 ./usr/lib/debug/.build-id/17/4dd599e4354bb102a05187b76e0b1587af5b54.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/18/
-rw-r--r-- root/root     54220 2020-11-02 06:09 ./usr/lib/debug/.build-id/18/a6aa714a84a3cf181b7fb8c927d8958955a20f.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/25/
-rw-r--r-- root/root    162012 2020-11-02 06:09 ./usr/lib/debug/.build-id/25/a61a6ef23b07f47aa0cd9a273a752b724d6f0d.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/2a/
-rw-r--r-- root/root   5647516 2020-11-02 06:09 ./usr/lib/debug/.build-id/2a/0c6eef69ed2970b3b56d0645d5ddecb33c93ef.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/34/
-rw-r--r-- root/root      8156 2020-11-02 06:09 ./usr/lib/debug/.build-id/34/7a44ca91682f660d88bff5a7c5693a72f3d292.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/4a/
-rw-r--r-- root/root  10980548 2020-11-02 06:09 ./usr/lib/debug/.build-id/4a/d930d830ec25680f171b5385238827eddb0c39.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/4c/
-rw-r--r-- root/root     51204 2020-11-02 06:09 ./usr/lib/debug/.build-id/4c/f54b4839e87177f6ca9d95e7ed3f536399baf4.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/50/
-rw-r--r-- root/root    408224 2020-11-02 06:09 ./usr/lib/debug/.build-id/50/62e0b7a2de1531c7f3446c9988f86b46783062.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/54/
-rw-r--r-- root/root    561280 2020-11-02 06:09 ./usr/lib/debug/.build-id/54/69703fa2c8e2c60e395d92afa16fc9e2d1c32e.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/65/
-rw-r--r-- root/root   6397240 2020-11-02 06:09 ./usr/lib/debug/.build-id/65/00dd4dc5b962c97236fefc3d9ebeda3a8926c6.debug
-rw-r--r-- root/root    271068 2020-11-02 06:09 ./usr/lib/debug/.build-id/65/6593ff0024df72010c2f194800e9fd81b3ce38.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/69/
-rw-r--r-- root/root   1179368 2020-11-02 06:09 ./usr/lib/debug/.build-id/69/a3525ac424e9f2278b5de7443ff7f9f7262671.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/6c/
-rw-r--r-- root/root   2470340 2020-11-02 06:09 ./usr/lib/debug/.build-id/6c/f7e69a7556235472f75b1884ea45935a71c714.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/70/
-rw-r--r-- root/root   2346348 2020-11-02 06:09 ./usr/lib/debug/.build-id/70/e0d93353ee84e4477e29e1fa5d20ea59086650.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/71/
-rw-r--r-- root/root    292496 2020-11-02 06:09 ./usr/lib/debug/.build-id/71/4d13fdd922ed6bd3031df7674dbc8d19649364.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/7a/
-rw-r--r-- root/root    620688 2020-11-02 06:09 ./usr/lib/debug/.build-id/7a/7421c15263990f2d3fa32be86df8fb64b6e80b.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/7c/
-rw-r--r-- root/root   4130692 2020-11-02 06:09 ./usr/lib/debug/.build-id/7c/c6c287586bade580e267444772962a6100b888.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/81/
-rw-r--r-- root/root    513640 2020-11-02 06:09 ./usr/lib/debug/.build-id/81/5361d61795d28cefc07e1c06f346f33a020a64.debug
-rw-r--r-- root/root   1641140 2020-11-02 06:09 ./usr/lib/debug/.build-id/81/8ce991026f80c91933a3a02aea6d6efa18117f.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/84/
-rw-r--r-- root/root   1702124 2020-11-02 06:09 ./usr/lib/debug/.build-id/84/2c7f1f17a8f9c2e4a892144ad2d0ef491aa15a.debug
-rw-r--r-- root/root    290100 2020-11-02 06:09 ./usr/lib/debug/.build-id/84/60c19b2d64bb38b7f50d3b01584e7fcb35c6ce.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/85/
-rw-r--r-- root/root    575904 2020-11-02 06:09 ./usr/lib/debug/.build-id/85/9d19491ed5b133cb937a8d6091e0ab7410167b.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/8a/
-rw-r--r-- root/root  10352408 2020-11-02 06:09 ./usr/lib/debug/.build-id/8a/4cd732ea5aae870452473115dcb4a5ad73fb85.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/91/
-rw-r--r-- root/root   2008796 2020-11-02 06:09 ./usr/lib/debug/.build-id/91/7c0645a19c4bcfbc2186f94b1586b9a30dada2.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/93/
-rw-r--r-- root/root     73244 2020-11-02 06:09 ./usr/lib/debug/.build-id/93/a6bd9c1e3ce2c9966b091476aa1b75ec7d4bc5.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/96/
-rw-r--r-- root/root   1288308 2020-11-02 06:09 ./usr/lib/debug/.build-id/96/b5e08a2f50a12029cbccf44afc21cd014d7002.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/97/
-rw-r--r-- root/root   3385796 2020-11-02 06:09 ./usr/lib/debug/.build-id/97/23ab1a2ace3ca002ca60a59f63ea25bc42a9ea.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/9b/
-rw-r--r-- root/root    759800 2020-11-02 06:09 ./usr/lib/debug/.build-id/9b/effbbe587af1cc7366fa1228db74ab55b56bcc.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/a5/
-rw-r--r-- root/root     31596 2020-11-02 06:09 ./usr/lib/debug/.build-id/a5/a37d2981db2f8aee74172b44aa32c533328005.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/aa/
-rw-r--r-- root/root   2208692 2020-11-02 06:09 ./usr/lib/debug/.build-id/aa/03a34987954bf5c51c6a86f684220528bf9e9c.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b0/
-rw-r--r-- root/root   1272216 2020-11-02 06:09 ./usr/lib/debug/.build-id/b0/8d1fe3bfdbbdaad4fb413f84dd36b47f28b145.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b7/
-rw-r--r-- root/root   1054400 2020-11-02 06:09 ./usr/lib/debug/.build-id/b7/0cd3784ee9f028334ca597eb4438774633b3bf.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/bb/
-rw-r--r-- root/root    259448 2020-11-02 06:09 ./usr/lib/debug/.build-id/bb/c077d595719a80b04f6f11f7015ac07449bd69.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/c8/
-rw-r--r-- root/root    565276 2020-11-02 06:09 ./usr/lib/debug/.build-id/c8/526d539dda495e6490a290cf8b3bfcadd5a1b3.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/d0/
-rw-r--r-- root/root   1362200 2020-11-02 06:09 ./usr/lib/debug/.build-id/d0/a8af1fe2942aa4a9ec071c98048ee3f32ba1e0.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/d2/
-rw-r--r-- root/root    125032 2020-11-02 06:09 ./usr/lib/debug/.build-id/d2/0cdd7c1bde3eed2726e158ae524bef9cf98e52.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/d7/
-rw-r--r-- root/root   2169824 2020-11-02 06:09 ./usr/lib/debug/.build-id/d7/09b12ae665b04de67787f89b529abafa2ca41f.debug
-rw-r--r-- root/root   1549296 2020-11-02 06:09 ./usr/lib/debug/.build-id/d7/8d4b80d2c6b78671ea944423c656d625700125.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/e7/
-rw-r--r-- root/root   1251188 2020-11-02 06:09 ./usr/lib/debug/.build-id/e7/099a7b3315384df853e341763fb9b1a021be97.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/f0/
-rw-r--r-- root/root   2766864 2020-11-02 06:09 ./usr/lib/debug/.build-id/f0/8cad42d6abdecd05fd1b0b1420036c1bd43eca.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/f5/
-rw-r--r-- root/root   1206600 2020-11-02 06:09 ./usr/lib/debug/.build-id/f5/53ca450c41ccd543fb121b785c891a5da15f92.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/fa/
-rw-r--r-- root/root    123612 2020-11-02 06:09 ./usr/lib/debug/.build-id/fa/360ea6849eb8d397b4d306a6690ee392bf4f32.debug
-rw-r--r-- root/root    205632 2020-11-02 06:09 ./usr/lib/debug/.build-id/fa/868cda4496461a5508eb9de2292bd8df8e503b.debug
-rw-r--r-- root/root   4076700 2020-11-02 06:09 ./usr/lib/debug/.build-id/fa/f8485544c50fc63a4edc23c14715843051c1cc.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/share/doc/librdkit1-dbgsym -> librdkit1


librdkit1_202003.4-4+b1_armhf.deb
---------------------------------

 new Debian package, version 2.0.
 size 2592156 bytes: control archive=2932 bytes.
    1731 bytes,    37 lines      control              
    4001 bytes,    52 lines      md5sums              
    1513 bytes,    47 lines      shlibs               
      65 bytes,     2 lines      triggers             
 Package: librdkit1
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 11981
 Depends: libboost-iostreams1.71.0, libboost-python1.71.0, libboost-python1.71.0-py39, libboost-serialization1.71.0, libc6 (>= 2.29), libcoordgen1 (>= 1.4.2), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.2.4), libpython3.9 (>= 3.9.0~b4), libstdc++6 (>= 9)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitAlignment.so.1 -> libRDKitAlignment.so.1.2020.03.4
-rw-r--r-- root/root     21920 2020-11-02 06:09 ./usr/lib/libRDKitAlignment.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitCatalogs.so.1 -> libRDKitCatalogs.so.1.2020.03.4
-rw-r--r-- root/root      5484 2020-11-02 06:09 ./usr/lib/libRDKitCatalogs.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitChemReactions.so.1 -> libRDKitChemReactions.so.1.2020.03.4
-rw-r--r-- root/root    939424 2020-11-02 06:09 ./usr/lib/libRDKitChemReactions.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitChemTransforms.so.1 -> libRDKitChemTransforms.so.1.2020.03.4
-rw-r--r-- root/root    239008 2020-11-02 06:09 ./usr/lib/libRDKitChemTransforms.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitChemicalFeatures.so.1 -> libRDKitChemicalFeatures.so.1.2020.03.4
-rw-r--r-- root/root      9576 2020-11-02 06:09 ./usr/lib/libRDKitChemicalFeatures.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDataStructs.so.1 -> libRDKitDataStructs.so.1.2020.03.4
-rw-r--r-- root/root    218528 2020-11-02 06:09 ./usr/lib/libRDKitDataStructs.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDepictor.so.1 -> libRDKitDepictor.so.1.2020.03.4
-rw-r--r-- root/root    214492 2020-11-02 06:09 ./usr/lib/libRDKitDepictor.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDescriptors.so.1 -> libRDKitDescriptors.so.1.2020.03.4
-rw-r--r-- root/root    285268 2020-11-02 06:09 ./usr/lib/libRDKitDescriptors.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDistGeomHelpers.so.1 -> libRDKitDistGeomHelpers.so.1.2020.03.4
-rw-r--r-- root/root    230816 2020-11-02 06:09 ./usr/lib/libRDKitDistGeomHelpers.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitDistGeometry.so.1 -> libRDKitDistGeometry.so.1.2020.03.4
-rw-r--r-- root/root    107936 2020-11-02 06:09 ./usr/lib/libRDKitDistGeometry.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitEigenSolvers.so.1 -> libRDKitEigenSolvers.so.1.2020.03.4
-rw-r--r-- root/root     21920 2020-11-02 06:09 ./usr/lib/libRDKitEigenSolvers.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFMCS.so.1 -> libRDKitFMCS.so.1.2020.03.4
-rw-r--r-- root/root    255448 2020-11-02 06:09 ./usr/lib/libRDKitFMCS.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFileParsers.so.1 -> libRDKitFileParsers.so.1.2020.03.4
-rw-r--r-- root/root   1324964 2020-11-02 06:09 ./usr/lib/libRDKitFileParsers.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFilterCatalog.so.1 -> libRDKitFilterCatalog.so.1.2020.03.4
-rw-r--r-- root/root    890280 2020-11-02 06:09 ./usr/lib/libRDKitFilterCatalog.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFingerprints.so.1 -> libRDKitFingerprints.so.1.2020.03.4
-rw-r--r-- root/root    411120 2020-11-02 06:09 ./usr/lib/libRDKitFingerprints.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitForceField.so.1 -> libRDKitForceField.so.1.2020.03.4
-rw-r--r-- root/root    538016 2020-11-02 06:09 ./usr/lib/libRDKitForceField.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitForceFieldHelpers.so.1 -> libRDKitForceFieldHelpers.so.1.2020.03.4
-rw-r--r-- root/root    394656 2020-11-02 06:09 ./usr/lib/libRDKitForceFieldHelpers.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitFragCatalog.so.1 -> libRDKitFragCatalog.so.1.2020.03.4
-rw-r--r-- root/root    173472 2020-11-02 06:09 ./usr/lib/libRDKitFragCatalog.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitGraphMol.so.1 -> libRDKitGraphMol.so.1.2020.03.4
-rw-r--r-- root/root   1381792 2020-11-02 06:09 ./usr/lib/libRDKitGraphMol.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitInfoTheory.so.1 -> libRDKitInfoTheory.so.1.2020.03.4
-rw-r--r-- root/root     34208 2020-11-02 06:09 ./usr/lib/libRDKitInfoTheory.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMMPA.so.1 -> libRDKitMMPA.so.1.2020.03.4
-rw-r--r-- root/root     71072 2020-11-02 06:09 ./usr/lib/libRDKitMMPA.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolAlign.so.1 -> libRDKitMolAlign.so.1.2020.03.4
-rw-r--r-- root/root    210336 2020-11-02 06:09 ./usr/lib/libRDKitMolAlign.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolCatalog.so.1 -> libRDKitMolCatalog.so.1.2020.03.4
-rw-r--r-- root/root     34208 2020-11-02 06:09 ./usr/lib/libRDKitMolCatalog.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolChemicalFeatures.so.1 -> libRDKitMolChemicalFeatures.so.1.2020.03.4
-rw-r--r-- root/root    128416 2020-11-02 06:09 ./usr/lib/libRDKitMolChemicalFeatures.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolDraw2D.so.1 -> libRDKitMolDraw2D.so.1.2020.03.4
-rw-r--r-- root/root    497096 2020-11-02 06:09 ./usr/lib/libRDKitMolDraw2D.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolHash.so.1 -> libRDKitMolHash.so.1.2020.03.4
-rw-r--r-- root/root    194192 2020-11-02 06:09 ./usr/lib/libRDKitMolHash.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolInterchange.so.1 -> libRDKitMolInterchange.so.1.2020.03.4
-rw-r--r-- root/root    247200 2020-11-02 06:09 ./usr/lib/libRDKitMolInterchange.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolStandardize.so.1 -> libRDKitMolStandardize.so.1.2020.03.4
-rw-r--r-- root/root    525732 2020-11-02 06:09 ./usr/lib/libRDKitMolStandardize.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitMolTransforms.so.1 -> libRDKitMolTransforms.so.1.2020.03.4
-rw-r--r-- root/root     75168 2020-11-02 06:09 ./usr/lib/libRDKitMolTransforms.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitOptimizer.so.1 -> libRDKitOptimizer.so.1.2020.03.4
-rw-r--r-- root/root      5432 2020-11-02 06:09 ./usr/lib/libRDKitOptimizer.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitPartialCharges.so.1 -> libRDKitPartialCharges.so.1.2020.03.4
-rw-r--r-- root/root     66976 2020-11-02 06:09 ./usr/lib/libRDKitPartialCharges.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDBoost.so.1 -> libRDKitRDBoost.so.1.2020.03.4
-rw-r--r-- root/root      9576 2020-11-02 06:09 ./usr/lib/libRDKitRDBoost.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDGeneral.so.1 -> libRDKitRDGeneral.so.1.2020.03.4
-rw-r--r-- root/root     54648 2020-11-02 06:09 ./usr/lib/libRDKitRDGeneral.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDGeometryLib.so.1 -> libRDKitRDGeometryLib.so.1.2020.03.4
-rw-r--r-- root/root     91556 2020-11-02 06:09 ./usr/lib/libRDKitRDGeometryLib.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRDStreams.so.1 -> libRDKitRDStreams.so.1.2020.03.4
-rw-r--r-- root/root    112032 2020-11-02 06:09 ./usr/lib/libRDKitRDStreams.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitRGroupDecomposition.so.1 -> libRDKitRGroupDecomposition.so.1.2020.03.4
-rw-r--r-- root/root    169376 2020-11-02 06:09 ./usr/lib/libRDKitRGroupDecomposition.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitReducedGraphs.so.1 -> libRDKitReducedGraphs.so.1.2020.03.4
-rw-r--r-- root/root     66996 2020-11-02 06:09 ./usr/lib/libRDKitReducedGraphs.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSLNParse.so.1 -> libRDKitSLNParse.so.1.2020.03.4
-rw-r--r-- root/root    337824 2020-11-02 06:09 ./usr/lib/libRDKitSLNParse.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitScaffoldNetwork.so.1 -> libRDKitScaffoldNetwork.so.1.2020.03.4
-rw-r--r-- root/root    140704 2020-11-02 06:09 ./usr/lib/libRDKitScaffoldNetwork.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitShapeHelpers.so.1 -> libRDKitShapeHelpers.so.1.2020.03.4
-rw-r--r-- root/root     26016 2020-11-02 06:09 ./usr/lib/libRDKitShapeHelpers.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSimDivPickers.so.1 -> libRDKitSimDivPickers.so.1.2020.03.4
-rw-r--r-- root/root     17824 2020-11-02 06:09 ./usr/lib/libRDKitSimDivPickers.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSmilesParse.so.1 -> libRDKitSmilesParse.so.1.2020.03.4
-rw-r--r-- root/root    509344 2020-11-02 06:09 ./usr/lib/libRDKitSmilesParse.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSubgraphs.so.1 -> libRDKitSubgraphs.so.1.2020.03.4
-rw-r--r-- root/root     66976 2020-11-02 06:09 ./usr/lib/libRDKitSubgraphs.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSubstructLibrary.so.1 -> libRDKitSubstructLibrary.so.1.2020.03.4
-rw-r--r-- root/root    501152 2020-11-02 06:09 ./usr/lib/libRDKitSubstructLibrary.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2020.03.4
-rw-r--r-- root/root    165280 2020-11-02 06:09 ./usr/lib/libRDKitSubstructMatch.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2020.03.4
-rw-r--r-- root/root     62904 2020-11-02 06:09 ./usr/lib/libRDKitTrajectory.so.1.2020.03.4
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2020.03.4
-rw-r--r-- root/root      9476 2020-11-02 06:09 ./usr/lib/libRDKithc.so.1.2020.03.4
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/librdkit1/
-rw-r--r-- root/root       223 2020-11-02 06:09 ./usr/share/doc/librdkit1/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4845 2020-11-02 06:09 ./usr/share/doc/librdkit1/changelog.Debian.gz
-rw-r--r-- root/root     70602 2020-07-02 05:58 ./usr/share/doc/librdkit1/changelog.gz
-rw-r--r-- root/root      6705 2020-10-27 11:33 ./usr/share/doc/librdkit1/copyright
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       107 2020-10-27 11:33 ./usr/share/lintian/overrides/librdkit1


postgresql-13-rdkit-dbgsym_202003.4-4+b1_armhf.deb
--------------------------------------------------

 new Debian package, version 2.0.
 size 817792 bytes: control archive=544 bytes.
     411 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: postgresql-13-rdkit-dbgsym
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 869
 Depends: postgresql-13-rdkit (= 202003.4-4+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-13-rdkit
 Build-Ids: 7d314a8204ad86267fbe19d67f5b5579607ed3ec

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/7d/
-rw-r--r-- root/root    879128 2020-11-02 06:09 ./usr/lib/debug/.build-id/7d/314a8204ad86267fbe19d67f5b5579607ed3ec.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/share/doc/postgresql-13-rdkit-dbgsym -> postgresql-13-rdkit


postgresql-13-rdkit_202003.4-4+b1_armhf.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 349204 bytes: control archive=1720 bytes.
    1578 bytes,    37 lines      control              
    1761 bytes,    21 lines      md5sums              
 Package: postgresql-13-rdkit
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 815
 Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), librdkit1, libstdc++6 (>= 5.2), postgresql-13
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/postgresql/13/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/
-rw-r--r-- root/root     35136 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit.index.bc
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/
-rw-r--r-- root/root    258312 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/adapter.bc
-rw-r--r-- root/root      7392 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/bfp_gin.bc
-rw-r--r-- root/root     16796 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/bfp_gist.bc
-rw-r--r-- root/root     17396 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/bfp_op.bc
-rw-r--r-- root/root      8336 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/bitstring.bc
-rw-r--r-- root/root     16060 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/cache.bc
-rw-r--r-- root/root     15004 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/guc.bc
-rw-r--r-- root/root     13484 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/low_gist.bc
-rw-r--r-- root/root     37980 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/mol_op.bc
-rw-r--r-- root/root     19384 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/rdkit_gist.bc
-rw-r--r-- root/root     21752 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/rdkit_io.bc
-rw-r--r-- root/root     10444 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/rxn_op.bc
-rw-r--r-- root/root     15256 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/bitcode/rdkit/sfp_op.bc
-rw-r--r-- root/root    189964 2020-11-02 06:09 ./usr/lib/postgresql/13/lib/rdkit.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/postgresql-13-rdkit/
-rw-r--r-- root/root       223 2020-11-02 06:09 ./usr/share/doc/postgresql-13-rdkit/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4845 2020-11-02 06:09 ./usr/share/doc/postgresql-13-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     70602 2020-07-02 05:58 ./usr/share/doc/postgresql-13-rdkit/changelog.gz
-rw-r--r-- root/root      6705 2020-10-27 11:33 ./usr/share/doc/postgresql-13-rdkit/copyright
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/postgresql/13/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/postgresql/13/extension/
-rw-r--r-- root/root     42915 2020-11-02 06:09 ./usr/share/postgresql/13/extension/rdkit--3.8.sql
-rw-r--r-- root/root       135 2020-11-02 06:09 ./usr/share/postgresql/13/extension/rdkit.control


python3-rdkit-dbgsym_202003.4-4+b1_armhf.deb
--------------------------------------------

 new Debian package, version 2.0.
 size 57898264 bytes: control archive=2548 bytes.
    2178 bytes,    13 lines      control              
    4664 bytes,    44 lines      md5sums              
 Package: python3-rdkit-dbgsym
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 64713
 Depends: python3-rdkit (= 202003.4-4+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-rdkit
 Build-Ids: 132b19349f01beb0f18743c2eec51fa3282331bf 137878f5b794dbcf45d1e96bdfa1bf521fe7eb79 26c33f9bd657968e8df5d44ed24691faeca2c5f0 2a626073a12e3ce705f25d085959337c89e0c6d8 492897089b6138600a675cbc2e15b8bf0581e279 5249e62ee30fca950dda89e20cc932c1ec164a2f 691c4bf05e9628829b50d316d74ca64783d1bb77 70c9a9dbbd806c3398c3d008cf113789e1daa114 7103cb7a9da0899b7ae99749af711cc4c047261a 795ad666651479131a3c7c635d0a9a773e95f896 7a7ddca58a7cd7b9c9d231622089ac0a006e112a 7aca489118021785dece40a0d91f72dd0da8d45a 7bdcf0e001a8500989b3104d4d9539e4f4cddca6 7cada513f5302e3573bb932e2f8f0c7935ffa953 80bbef2ba2988d1948ae18fd6558c8d00742ec5f 8a96bb02ba2b3ec07e0b81195a9be3292b675faa 8b366586f7d900ef289d7f8d7742db035c2a026e 8e80a026b01a51d7c3b9ad88a16f2c37809148d3 9cde933f76a02d9c4675df7c44d998778add39f7 9d8fe6164bdf2d60aa9fe2465dfe4ca5f0739e29 a0a46e22554344f44e584e515be6bae12be11e3c ab8b2116b25384968c35245136eb73d667e81efb accb91df5fcc8a820b85d0d883298830ab91ddc2 acf52b465ca40b32fa3916a4003b49c4f9f46abb ad0bdac0375e1196b44054d9f7d8c5904d552676 b1eeae53f6a3c26db9602dcf8c553accf704cb22 b203aaad58740b2778b09e68bdf213616a896b7d b3c57e2724e3f6d7d50daa9a1aa7a1e8caf6c3f1 b60645409ab5a7e8c4983800013f79c271f7759f b68600eb2241b05335d0dc5d17e96caae1081950 b858d3e8c2b24881f074b10563b03a7622829139 b86ef460ca8babc81b2c908d50c8e987bd715248 bd7b8e1ad5e10f7fa9420e55b548997c43388234 cdbb2debd91d587bb7b4a74bb8bf061991751f73 dfcb8753f7c3352bbfddd1afd28643b3b3213f5a e2288779a83972d990cf824f8262d42f46764f1d e82e15939e592da7522fedf90454ac3208d6c2ad eb23f674acf0fece0b4edfd840085de5e45f7261 eb5a735576aed79a64445ba029f2626f8094d568 ebc90f4f2aced157487bf8f7727cc729b6b604dd ec0c194b62cc55326919cdcec23ddf910d0fa7f3 f0d2e13b4aaff49b6f9ca5ddd31800906c413251 f3d967e80c817d2727442d2848e8c2cfc9529f2b fd4888ec44d5a3f7fc7b3fb217a4a4414c2fa2fe
 Python-Version: 3.9

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/13/
-rw-r--r-- root/root   1201344 2020-11-02 06:09 ./usr/lib/debug/.build-id/13/2b19349f01beb0f18743c2eec51fa3282331bf.debug
-rw-r--r-- root/root   1286312 2020-11-02 06:09 ./usr/lib/debug/.build-id/13/7878f5b794dbcf45d1e96bdfa1bf521fe7eb79.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/26/
-rw-r--r-- root/root    389912 2020-11-02 06:09 ./usr/lib/debug/.build-id/26/c33f9bd657968e8df5d44ed24691faeca2c5f0.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/2a/
-rw-r--r-- root/root    872456 2020-11-02 06:09 ./usr/lib/debug/.build-id/2a/626073a12e3ce705f25d085959337c89e0c6d8.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/49/
-rw-r--r-- root/root    392268 2020-11-02 06:09 ./usr/lib/debug/.build-id/49/2897089b6138600a675cbc2e15b8bf0581e279.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/52/
-rw-r--r-- root/root    378492 2020-11-02 06:09 ./usr/lib/debug/.build-id/52/49e62ee30fca950dda89e20cc932c1ec164a2f.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/69/
-rw-r--r-- root/root   3581364 2020-11-02 06:09 ./usr/lib/debug/.build-id/69/1c4bf05e9628829b50d316d74ca64783d1bb77.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/70/
-rw-r--r-- root/root   3356684 2020-11-02 06:09 ./usr/lib/debug/.build-id/70/c9a9dbbd806c3398c3d008cf113789e1daa114.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/71/
-rw-r--r-- root/root    272176 2020-11-02 06:09 ./usr/lib/debug/.build-id/71/03cb7a9da0899b7ae99749af711cc4c047261a.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/79/
-rw-r--r-- root/root    322864 2020-11-02 06:09 ./usr/lib/debug/.build-id/79/5ad666651479131a3c7c635d0a9a773e95f896.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/7a/
-rw-r--r-- root/root    290276 2020-11-02 06:09 ./usr/lib/debug/.build-id/7a/7ddca58a7cd7b9c9d231622089ac0a006e112a.debug
-rw-r--r-- root/root   2184148 2020-11-02 06:09 ./usr/lib/debug/.build-id/7a/ca489118021785dece40a0d91f72dd0da8d45a.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/7b/
-rw-r--r-- root/root   5408392 2020-11-02 06:09 ./usr/lib/debug/.build-id/7b/dcf0e001a8500989b3104d4d9539e4f4cddca6.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/7c/
-rw-r--r-- root/root   1364768 2020-11-02 06:09 ./usr/lib/debug/.build-id/7c/ada513f5302e3573bb932e2f8f0c7935ffa953.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/80/
-rw-r--r-- root/root   1494212 2020-11-02 06:09 ./usr/lib/debug/.build-id/80/bbef2ba2988d1948ae18fd6558c8d00742ec5f.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/8a/
-rw-r--r-- root/root    406356 2020-11-02 06:09 ./usr/lib/debug/.build-id/8a/96bb02ba2b3ec07e0b81195a9be3292b675faa.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/8b/
-rw-r--r-- root/root   1355608 2020-11-02 06:09 ./usr/lib/debug/.build-id/8b/366586f7d900ef289d7f8d7742db035c2a026e.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/8e/
-rw-r--r-- root/root   4701228 2020-11-02 06:09 ./usr/lib/debug/.build-id/8e/80a026b01a51d7c3b9ad88a16f2c37809148d3.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/9c/
-rw-r--r-- root/root   4050640 2020-11-02 06:09 ./usr/lib/debug/.build-id/9c/de933f76a02d9c4675df7c44d998778add39f7.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/9d/
-rw-r--r-- root/root    682452 2020-11-02 06:09 ./usr/lib/debug/.build-id/9d/8fe6164bdf2d60aa9fe2465dfe4ca5f0739e29.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/a0/
-rw-r--r-- root/root    941340 2020-11-02 06:09 ./usr/lib/debug/.build-id/a0/a46e22554344f44e584e515be6bae12be11e3c.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/ab/
-rw-r--r-- root/root    534812 2020-11-02 06:09 ./usr/lib/debug/.build-id/ab/8b2116b25384968c35245136eb73d667e81efb.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/ac/
-rw-r--r-- root/root   1088228 2020-11-02 06:09 ./usr/lib/debug/.build-id/ac/cb91df5fcc8a820b85d0d883298830ab91ddc2.debug
-rw-r--r-- root/root    901536 2020-11-02 06:09 ./usr/lib/debug/.build-id/ac/f52b465ca40b32fa3916a4003b49c4f9f46abb.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/ad/
-rw-r--r-- root/root    784756 2020-11-02 06:09 ./usr/lib/debug/.build-id/ad/0bdac0375e1196b44054d9f7d8c5904d552676.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b1/
-rw-r--r-- root/root    712040 2020-11-02 06:09 ./usr/lib/debug/.build-id/b1/eeae53f6a3c26db9602dcf8c553accf704cb22.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b2/
-rw-r--r-- root/root    254020 2020-11-02 06:09 ./usr/lib/debug/.build-id/b2/03aaad58740b2778b09e68bdf213616a896b7d.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b3/
-rw-r--r-- root/root    936580 2020-11-02 06:09 ./usr/lib/debug/.build-id/b3/c57e2724e3f6d7d50daa9a1aa7a1e8caf6c3f1.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b6/
-rw-r--r-- root/root    720996 2020-11-02 06:09 ./usr/lib/debug/.build-id/b6/0645409ab5a7e8c4983800013f79c271f7759f.debug
-rw-r--r-- root/root    215228 2020-11-02 06:09 ./usr/lib/debug/.build-id/b6/8600eb2241b05335d0dc5d17e96caae1081950.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/b8/
-rw-r--r-- root/root   1410488 2020-11-02 06:09 ./usr/lib/debug/.build-id/b8/58d3e8c2b24881f074b10563b03a7622829139.debug
-rw-r--r-- root/root   2197620 2020-11-02 06:09 ./usr/lib/debug/.build-id/b8/6ef460ca8babc81b2c908d50c8e987bd715248.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/bd/
-rw-r--r-- root/root   1848188 2020-11-02 06:09 ./usr/lib/debug/.build-id/bd/7b8e1ad5e10f7fa9420e55b548997c43388234.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/cd/
-rw-r--r-- root/root    457328 2020-11-02 06:09 ./usr/lib/debug/.build-id/cd/bb2debd91d587bb7b4a74bb8bf061991751f73.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/df/
-rw-r--r-- root/root    443816 2020-11-02 06:09 ./usr/lib/debug/.build-id/df/cb8753f7c3352bbfddd1afd28643b3b3213f5a.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/e2/
-rw-r--r-- root/root    149464 2020-11-02 06:09 ./usr/lib/debug/.build-id/e2/288779a83972d990cf824f8262d42f46764f1d.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/e8/
-rw-r--r-- root/root    569436 2020-11-02 06:09 ./usr/lib/debug/.build-id/e8/2e15939e592da7522fedf90454ac3208d6c2ad.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/eb/
-rw-r--r-- root/root   1455152 2020-11-02 06:09 ./usr/lib/debug/.build-id/eb/23f674acf0fece0b4edfd840085de5e45f7261.debug
-rw-r--r-- root/root  10733076 2020-11-02 06:09 ./usr/lib/debug/.build-id/eb/5a735576aed79a64445ba029f2626f8094d568.debug
-rw-r--r-- root/root    444344 2020-11-02 06:09 ./usr/lib/debug/.build-id/eb/c90f4f2aced157487bf8f7727cc729b6b604dd.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/ec/
-rw-r--r-- root/root   1042860 2020-11-02 06:09 ./usr/lib/debug/.build-id/ec/0c194b62cc55326919cdcec23ddf910d0fa7f3.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/f0/
-rw-r--r-- root/root    364164 2020-11-02 06:09 ./usr/lib/debug/.build-id/f0/d2e13b4aaff49b6f9ca5ddd31800906c413251.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/f3/
-rw-r--r-- root/root   2912296 2020-11-02 06:09 ./usr/lib/debug/.build-id/f3/d967e80c817d2727442d2848e8c2cfc9529f2b.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/debug/.build-id/fd/
-rw-r--r-- root/root   1083484 2020-11-02 06:09 ./usr/lib/debug/.build-id/fd/4888ec44d5a3f7fc7b3fb217a4a4414c2fa2fe.debug
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/share/doc/python3-rdkit-dbgsym -> python3-rdkit


python3-rdkit_202003.4-4+b1_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 3003932 bytes: control archive=12632 bytes.
    1857 bytes,    38 lines      control              
   44996 bytes,   454 lines      md5sums              
     251 bytes,    12 lines   *  postinst             #!/bin/sh
     400 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-rdkit
 Source: rdkit (202003.4-4)
 Version: 202003.4-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 17939
 Depends: fonts-freefont-ttf, rdkit-data, python3 (<< 3.10), python3 (>= 3.9~), python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3:any, libboost-python1.71.0, libboost-python1.71.0-py39, libboost-serialization1.71.0, libc6 (>= 2.29), libcoordgen1 (>= 1.4.2), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.2.4), libpython3.9 (>= 3.9.0~b4), librdkit1, libstdc++6 (>= 9)
 Suggests: rdkit-doc
 Provides: python3.9-rdkit
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
 Python-Version: 3.9

drwxr-xr-x root/root         0 2020-11-02 06:09 ./
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Avalon/
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Avalon/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/
-rw-r--r-- root/root     16547 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/AllChem.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/
-rw-r--r-- root/root      5642 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-rw-r--r-- root/root      3280 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-rw-r--r-- root/root      5371 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-rw-r--r-- root/root      9279 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-rw-r--r-- root/root     35663 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/BRICS.py
-rw-r--r-- root/root     20973 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/
-rw-r--r-- root/root      2957 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-rw-r--r-- root/root      1974 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-rw-r--r-- root/root       521 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-rw-r--r-- root/root      2530 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-rw-r--r-- root/root     14372 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-rw-r--r-- root/root       719 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemicalFeatures.py
-rw-r--r-- root/root       363 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemicalForceFields.py
-rw-r--r-- root/root      6112 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Crippen.py
-rw-r--r-- root/root     12125 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/DSViewer.py
-rw-r--r-- root/root      7248 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Descriptors.py
-rw-r--r-- root/root      5880 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Descriptors3D.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/
lrwxrwxrwx root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf -> ../../../../../../share/fonts/truetype/freefont/FreeSans.ttf
-rw-r--r-- root/root     10069 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-rw-r--r-- root/root     22104 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-rw-r--r-- root/root     18047 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-rw-r--r-- root/root     33486 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/__init__.py
-rw-r--r-- root/root      5948 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-rw-r--r-- root/root     16369 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-rw-r--r-- root/root      2571 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/canvasbase.py
-rw-r--r-- root/root      3481 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-rw-r--r-- root/root      3567 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-rw-r--r-- root/root    546388 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root      3631 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/spingCanvas.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/
-rw-r--r-- root/root      4018 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/AtomTypes.py
-rw-r--r-- root/root      2532 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/EState.py
-rw-r--r-- root/root      3549 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/EState_VSA.py
-rw-r--r-- root/root      2137 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-rw-r--r-- root/root       386 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/__init__.py
-rw-r--r-- root/root     12070 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-rw-r--r-- root/root     13905 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-rw-r--r-- root/root       498 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-rw-r--r-- root/root      3328 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatFinderCLI.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/
-rw-r--r-- root/root      5307 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-rw-r--r-- root/root      3283 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-rw-r--r-- root/root      7261 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-rw-r--r-- root/root      7458 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/
-rw-r--r-- root/root     12296 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-rw-r--r-- root/root     12210 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/ShowFeats.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/__init__.py
-rw-r--r-- root/root      2162 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FilterCatalog.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/
-rw-r--r-- root/root      5671 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-rw-r--r-- root/root      4652 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-rw-r--r-- root/root     17540 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-rw-r--r-- root/root     10299 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-rw-r--r-- root/root      5016 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-rw-r--r-- root/root        67 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/
-rw-r--r-- root/root     14463 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/__init__.py
-rw-r--r-- root/root      2420 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FragmentCatalog.py
-rw-r--r-- root/root      2268 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FragmentMatcher.py
-rw-r--r-- root/root      1619 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Fragments.py
-rw-r--r-- root/root      5470 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/FunctionalGroups.py
-rw-r--r-- root/root     20296 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/GraphDescriptors.py
-rw-r--r-- root/root      1365 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Graphs.py
-rw-r--r-- root/root      4135 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Lipinski.py
-rw-r--r-- root/root     11752 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MACCSkeys.py
-rw-r--r-- root/root     17305 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MCS.py
-rw-r--r-- root/root        84 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolCatalog.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/
-rw-r--r-- root/root      3728 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-rw-r--r-- root/root       408 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader.py
-rw-r--r-- root/root      6741 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-rw-r--r-- root/root      6245 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/
-rw-r--r-- root/root      7303 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-rw-r--r-- root/root     15512 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/MolKey.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/
-rw-r--r-- root/root       928 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-rw-r--r-- root/root     15148 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/charge.py
-rw-r--r-- root/root       478 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/errors.py
-rw-r--r-- root/root     11295 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-rw-r--r-- root/root      3086 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/metal.py
-rw-r--r-- root/root      9676 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-rw-r--r-- root/root    545140 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root      3753 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-rw-r--r-- root/root     14395 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-rw-r--r-- root/root     17822 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-rw-r--r-- root/root       786 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/test_standardizer.py
-rw-r--r-- root/root       748 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/utils.py
-rw-r--r-- root/root      4196 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validate.py
-rw-r--r-- root/root      7169 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validations.py
-rw-r--r-- root/root     14675 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/MolSurf.py
-rw-r--r-- root/root     29088 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/PandasTools.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/
-rw-r--r-- root/root      5054 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-rw-r--r-- root/root      1901 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-rw-r--r-- root/root      4270 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-rw-r--r-- root/root      4042 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-rw-r--r-- root/root     11319 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-rw-r--r-- root/root     13122 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-rw-r--r-- root/root       888 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/
-rw-r--r-- root/root     40103 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-rw-r--r-- root/root       918 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-rw-r--r-- root/root      5917 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-rw-r--r-- root/root      3261 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/PropertyMol.py
-rw-r--r-- root/root      8405 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/PyMol.py
-rw-r--r-- root/root     11697 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/QED.py
-rw-r--r-- root/root      1788 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Randomize.py
-rw-r--r-- root/root     24160 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Recap.py
-rw-r--r-- root/root       562 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ReducedGraphs.py
-rw-r--r-- root/root      2807 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/SATIS.py
-rw-r--r-- root/root     10606 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/SaltRemover.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/
-rw-r--r-- root/root      4158 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-rw-r--r-- root/root    180941 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/ScaffoldNetwork.ipynb
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-rw-r--r-- root/root    391752 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/rdScaffoldNetwork.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root       931 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/ShowMols.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/
-rw-r--r-- root/root      8970 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/
-rw-r--r-- root/root     10858 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-rw-r--r-- root/root     13373 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-rw-r--r-- root/root      4237 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-rw-r--r-- root/root      2450 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/__init__.py
-rw-r--r-- root/root      1757 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/testCombined.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/
-rw-r--r-- root/root      4093 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-rw-r--r-- root/root       851 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/__init__.py
-rw-r--r-- root/root      3288 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/TemplateAlign.py
-rw-r--r-- root/root     24314 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/TorsionFingerprints.py
-rw-r--r-- root/root      3631 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/
-rw-r--r-- root/root       141 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/__init__.py
-rw-r--r-- root/root       152 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs
-rw-r--r-- root/root    105638 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs.py
-rw-r--r-- root/root      1686 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/inchi.py
-rw-r--r-- root/root   1221504 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdChemReactions.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    100360 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdChemicalFeatures.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    129068 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdCoordGen.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     83868 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdDepictor.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    207600 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdDistGeom.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    310428 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdFMCS.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    253088 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdFingerprintGenerator.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    166484 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdForceFieldHelpers.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    457032 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMHFPFingerprint.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     55040 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMMPA.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    211744 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolAlign.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    178520 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolCatalog.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    170244 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolChemicalFeatures.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    484396 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolDescriptors.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     42584 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolHash.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     67316 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolInterchange.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    117008 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolTransforms.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     22032 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdPartialCharges.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    211636 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdRGroupDecomposition.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     46704 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdReducedGraphs.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     38428 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdSLNParse.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    121032 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdShapeHelpers.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    351864 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdSubstructLibrary.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root   2457352 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdchem.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    989940 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdfiltercatalog.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    215552 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdfragcatalog.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    983160 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdmolfiles.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    579240 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdmolops.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    280956 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdqueries.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root    133488 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Chem/rdtrajectory.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DataManip/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DataManip/Metric/
-rw-r--r-- root/root       363 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataManip/Metric/__init__.py
-rw-r--r-- root/root     50692 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root        21 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataManip/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DataStructs/
-rw-r--r-- root/root      1192 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsemble.py
-rw-r--r-- root/root      1569 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-rw-r--r-- root/root      1132 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/BitUtils.py
-rw-r--r-- root/root      3876 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/HierarchyVis.py
-rw-r--r-- root/root      1472 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/LazySignature.py
-rw-r--r-- root/root      2037 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/TopNContainer.py
-rw-r--r-- root/root      6943 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/VectCollection.py
-rw-r--r-- root/root      1628 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DataStructs/__init__.py
-rw-r--r-- root/root   1133432 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DataStructs/cDataStructs.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Dbase/
-rw-r--r-- root/root      7973 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbConnection.py
-rw-r--r-- root/root      5758 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbInfo.py
-rw-r--r-- root/root      2146 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbModule.py
-rw-r--r-- root/root      7307 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbReport.py
-rw-r--r-- root/root      6092 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbResultSet.py
-rw-r--r-- root/root     14536 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbUtils.py
-rw-r--r-- root/root      7588 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/StorageUtils.py
-rw-r--r-- root/root       340 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Dbase/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DistanceGeometry/
-rw-r--r-- root/root     67196 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/DistanceGeometry/DistGeom.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root        46 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/DistanceGeometry/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ForceField/
-rw-r--r-- root/root        44 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ForceField/__init__.py
-rw-r--r-- root/root    257328 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ForceField/rdForceField.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Geometry/
-rw-r--r-- root/root       109 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Geometry/__init__.py
-rw-r--r-- root/root    435664 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Geometry/rdGeometry.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/
-rw-r--r-- root/root      9361 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/AnalyzeComposite.py
-rw-r--r-- root/root     35858 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/BuildComposite.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/
-rw-r--r-- root/root      3503 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Butina.py
-rw-r--r-- root/root      4413 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-rw-r--r-- root/root     15377 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-rw-r--r-- root/root     30320 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clustering.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root      8567 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clusters.py
-rw-r--r-- root/root      3184 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Murtagh.py
-rw-r--r-- root/root      3255 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Resemblance.py
-rw-r--r-- root/root       675 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Standardize.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/__init__.py
-rw-r--r-- root/root       890 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/murtagh_test.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/
-rw-r--r-- root/root      2591 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-rw-r--r-- root/root      4921 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/BayesComposite.py
-rw-r--r-- root/root     20578 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/Composite.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/__init__.py
-rw-r--r-- root/root      6898 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/CompositeRun.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Data/
-rw-r--r-- root/root     19128 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/DataUtils.py
-rw-r--r-- root/root      1655 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-rw-r--r-- root/root     11150 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/MLData.py
-rw-r--r-- root/root     11308 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/Quantize.py
-rw-r--r-- root/root      8813 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/SplitData.py
-rw-r--r-- root/root      6715 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/Stats.py
-rw-r--r-- root/root       877 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/Transforms.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Data/__init__.py
-rw-r--r-- root/root     42632 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Data/cQuantize.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/
-rw-r--r-- root/root     13414 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-rw-r--r-- root/root      7533 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-rw-r--r-- root/root      6944 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-rw-r--r-- root/root      3365 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/DecTree.py
-rw-r--r-- root/root      7870 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/Forest.py
-rw-r--r-- root/root      6700 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/ID3.py
-rw-r--r-- root/root      9403 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/PruneTree.py
-rw-r--r-- root/root      2518 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/QuantTree.py
-rw-r--r-- root/root      1772 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/SigTree.py
-rw-r--r-- root/root      7523 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/Tree.py
-rw-r--r-- root/root       775 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-rw-r--r-- root/root      6394 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeVis.py
-rw-r--r-- root/root       149 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/__init__.py
-rw-r--r-- root/root      1003 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/randomtest.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/
-rw-r--r-- root/root     14136 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-rw-r--r-- root/root      1553 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-rw-r--r-- root/root      3246 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-rw-r--r-- root/root     12437 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Parser.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__init__.py
-rw-r--r-- root/root     16240 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/EnrichPlot.py
-rw-r--r-- root/root     19738 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/GrowComposite.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/
-rw-r--r-- root/root      2321 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-rw-r--r-- root/root      5487 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-rw-r--r-- root/root        89 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__init__.py
-rw-r--r-- root/root      2820 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/entropy.py
-rw-r--r-- root/root    120804 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.cpython-39-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/
-rw-r--r-- root/root      3874 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/CrossValidate.py
-rw-r--r-- root/root      1427 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/DistFunctions.py
-rw-r--r-- root/root      1992 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-rw-r--r-- root/root      2233 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNModel.py
-rw-r--r-- root/root      1998 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-rw-r--r-- root/root        92 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/MLUtils/
-rw-r--r-- root/root      6144 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/MLUtils/__init__.py
-rw-r--r-- root/root       776 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/MatOps.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/
-rw-r--r-- root/root      4936 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-rw-r--r-- root/root      2513 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/Packager.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/
-rw-r--r-- root/root     10123 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-rw-r--r-- root/root      2660 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-rw-r--r-- root/root       124 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/
-rw-r--r-- root/root      1413 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/ActFuncs.py
-rw-r--r-- root/root      3924 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/CrossValidate.py
-rw-r--r-- root/root      4169 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/NetNode.py
-rw-r--r-- root/root      7342 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/Network.py
-rw-r--r-- root/root      7994 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/Trainers.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/__init__.py
-rw-r--r-- root/root       617 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/architecture.txt
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/SLT/
-rw-r--r-- root/root      3059 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/SLT/Risk.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/SLT/__init__.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/ML/Scoring/
-rw-r--r-- root/root      6384 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Scoring/Scoring.py
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/Scoring/__init__.py
-rw-r--r-- root/root     55093 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/ScreenComposite.py
-rw-r--r-- root/root       340 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/__init__.py
-rw-r--r-- root/root      2496 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/ML/files.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Numerics/
-rw-r--r-- root/root        91 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/Numerics/__init__.py
-rw-r--r-- root/root     54836 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/Numerics/rdAlignment.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root      2146 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/RDConfig.py
-rw-r--r-- root/root      1622 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/RDLogger.py
-rw-r--r-- root/root       436 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/RDPaths.py
-rw-r--r-- root/root       480 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/RDRandom.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/
-rw-r--r-- root/root      7306 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-rw-r--r-- root/root       252 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/__init__.py
-rw-r--r-- root/root    157860 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root      9353 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/TestRunner.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/VLib/
-rw-r--r-- root/root      2932 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/Filter.py
-rw-r--r-- root/root      4826 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/Node.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/
-rw-r--r-- root/root      1681 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-rw-r--r-- root/root      5731 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-rw-r--r-- root/root      1443 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-rw-r--r-- root/root      2668 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-rw-r--r-- root/root      3877 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-rw-r--r-- root/root      1497 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-rw-r--r-- root/root      2131 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-rw-r--r-- root/root      1967 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-rw-r--r-- root/root        95 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__init__.py
-rw-r--r-- root/root      2008 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/demo.py
-rw-r--r-- root/root      1739 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/Output.py
-rw-r--r-- root/root      1583 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/Supply.py
-rw-r--r-- root/root      2129 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/Transform.py
-rw-r--r-- root/root        13 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/VLib/__init__.py
-rw-r--r-- root/root       527 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/__init__.py
-rw-r--r-- root/root    812400 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/rdBase.cpython-39-arm-linux-gnueabihf.so
-rw-r--r-- root/root     23799 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/six.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/
-rw-r--r-- root/root        22 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/__init__.py
-rw-r--r-- root/root     15575 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfdoc.py
-rw-r--r-- root/root     38283 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgen.py
-rw-r--r-- root/root      2413 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgeom.py
-rw-r--r-- root/root     20538 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-rw-r--r-- root/root     10525 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfutils.py
-rw-r--r-- root/root     25105 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pidPDF.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/
-rw-r--r-- root/root        32 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/__init__.py
-rw-r--r-- root/root     15699 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pidPIL.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/
-rw-r--r-- root/root       990 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-rw-r--r-- root/root      1254 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-rw-r--r-- root/root      1540 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-rw-r--r-- root/root      1960 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-rw-r--r-- root/root      2829 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-rw-r--r-- root/root       731 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-rw-r--r-- root/root      1087 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-rw-r--r-- root/root      1370 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-rw-r--r-- root/root      1667 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-rw-r--r-- root/root      2336 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-rw-r--r-- root/root      3316 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-rw-r--r-- root/root       733 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-rw-r--r-- root/root      1060 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-rw-r--r-- root/root      1216 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-rw-r--r-- root/root      1566 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-rw-r--r-- root/root      2324 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-rw-r--r-- root/root      3465 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-rw-r--r-- root/root       800 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-rw-r--r-- root/root      1141 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-rw-r--r-- root/root      1399 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-rw-r--r-- root/root      1698 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-rw-r--r-- root/root      2504 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-rw-r--r-- root/root      3575 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-rw-r--r-- root/root       823 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-rw-r--r-- root/root     41265 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-rw-r--r-- root/root       213 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-rw-r--r-- root/root      1075 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-rw-r--r-- root/root      1386 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-rw-r--r-- root/root      1641 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-rw-r--r-- root/root      2361 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-rw-r--r-- root/root      3404 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-rw-r--r-- root/root       813 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-rw-r--r-- root/root      1002 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-rw-r--r-- root/root      1325 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-rw-r--r-- root/root      1588 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-rw-r--r-- root/root      2305 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-rw-r--r-- root/root      3313 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-rw-r--r-- root/root       703 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-rw-r--r-- root/root      1101 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-rw-r--r-- root/root      1418 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-rw-r--r-- root/root      1740 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-rw-r--r-- root/root      2495 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-rw-r--r-- root/root      3605 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-rw-r--r-- root/root      5143 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-rw-r--r-- root/root       764 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-rw-r--r-- root/root      5142 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/PS/
-rw-r--r-- root/root        31 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PS/__init__.py
-rw-r--r-- root/root       334 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PS/fontinfo.py
-rw-r--r-- root/root     18888 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-rw-r--r-- root/root     35407 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PS/pidPS.py
-rw-r--r-- root/root     17605 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/PS/psmetrics.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/
-rw-r--r-- root/root      3678 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-rw-r--r-- root/root        40 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/__init__.py
-rw-r--r-- root/root      8279 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/pidPyart.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/__init__.py
-rw-r--r-- root/root     11286 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt.py
-rw-r--r-- root/root     10747 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt4.py
-rw-r--r-- root/root      1939 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/README
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/ReportLab/
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/ReportLab/__init__.py
-rw-r--r-- root/root     10481 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/SVG/
-rw-r--r-- root/root        44 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/SVG/__init__.py
-rw-r--r-- root/root     23751 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/SVG/pidSVG.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/TK/
-rw-r--r-- root/root        20 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/TK/__init__.py
-rw-r--r-- root/root     16438 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/TK/pidTK.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/WX/
-rw-r--r-- root/root        20 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/WX/__init__.py
-rw-r--r-- root/root     12749 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/WX/pidWX.py
-rw-r--r-- root/root      8789 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/WX/pidWxDc.py
-rw-r--r-- root/root       154 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/__init__.py
-rw-r--r-- root/root      7117 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/colors.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/examples/
-rw-r--r-- root/root      1271 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/examples/formatted-strings.py
-rw-r--r-- root/root      2611 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-rw-r--r-- root/root      2608 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-rw-r--r-- root/root       600 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/pagesizes.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/patches/
-rw-r--r-- root/root      1197 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-rw-r--r-- root/root       854 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-rw-r--r-- root/root     22671 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/pid.py
-rw-r--r-- root/root     18013 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/stringformat.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/tests/
-rw-r--r-- root/root        26 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/tests/__init__.py
-rw-r--r-- root/root     15513 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/tests/pidtest.py
-rw-r--r-- root/root       431 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/tests/pstests.py
-rw-r--r-- root/root     19334 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.ps
-rw-r--r-- root/root       967 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/sping/util/
-rw-r--r-- root/root     13640 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/util/HTMLPiddler.py
-rw-r--r-- root/root        16 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/util/__init__.py
-rw-r--r-- root/root       390 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/sping/utils.py
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/lib/python3/dist-packages/rdkit/utils/
-rw-r--r-- root/root      2770 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/12h.gif
-rw-r--r-- root/root         0 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/__init__.py
-rw-r--r-- root/root      1781 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/cactvs.py
-rw-r--r-- root/root     11823 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/chemdraw.py
-rw-r--r-- root/root      2477 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/chemdraw_qax.py
-rw-r--r-- root/root      4901 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/chemutils.py
-rw-r--r-- root/root      2199 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/comhack.py
-rw-r--r-- root/root      1003 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/fileutils.py
-rw-r--r-- root/root      1189 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/listutils.py
-rw-r--r-- root/root       113 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/retest.txt
-rw-r--r-- root/root      1835 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/spiral.py
-rw-r--r-- root/root     16086 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/test1.gif
-rw-r--r-- root/root     11626 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/test2.gif
-rw-r--r-- root/root      6682 2020-07-02 05:58 ./usr/lib/python3/dist-packages/rdkit/utils/test3.gif
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-11-02 06:09 ./usr/share/doc/python3-rdkit/
-rw-r--r-- root/root       225 2020-10-27 11:33 ./usr/share/doc/python3-rdkit/TODO.Debian
-rw-r--r-- root/root       223 2020-11-02 06:09 ./usr/share/doc/python3-rdkit/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4845 2020-11-02 06:09 ./usr/share/doc/python3-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     70602 2020-07-02 05:58 ./usr/share/doc/python3-rdkit/changelog.gz
-rw-r--r-- root/root      6705 2020-10-27 11:33 ./usr/share/doc/python3-rdkit/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 3593292
Build-Time: 18286
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 2673
Job: rdkit_202003.4-4
Machine Architecture: armhf
Package: rdkit
Package-Time: 21036
Source-Version: 202003.4-4
Space: 3593292
Status: successful
Version: 202003.4-4+b1
--------------------------------------------------------------------------------
Finished at 2020-12-12T06:04:08Z
Build needed 05:50:36, 3593292k disc space

Page generated on 2024-05-18 14:30:53 UTC
Pages written by Mehdi Dogguy
Architecture specific issues should be sent to <$arch@buildd.debian.org>
Service maintained by the wanna-build team <debian-wb-team@lists.debian.org>
Download code with git: git clone https://buildd.debian.org/git/pgstatus.git
Valid XHTML  Valid CSS